SUPERFAMILY 1.75 HMM library and genome assignments server

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Fe-only hydrogenase smaller subunit superfamily domain assignments
in
Bacillus weihenstephanensis KBAB4

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   549 549
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Solanum tuberosum Potato 1 1
No Yes Triticum urartu 22   1 1
No Yes Zea mays v181 Maize 1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Naegleria gruberi   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Thermodesulfobium narugense DSM 14796   1 1
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   1 1
No Yes Thermodesulfovibrio yellowstonii DSM 11347   1 1
No Yes Desulfomonile tiedjei DSM 6799   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfovibrio aespoeensis Aspo-2   2 2
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Desulfovibrio alaskensis G20   2 2
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   1 1
No Yes Desulfovibrio salexigens DSM 2638   1 1
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella sp. MR-4   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   2 2
No Yes Desulfovibrio vulgaris RCH1   1 1
No Yes Desulfovibrio vulgaris str. Hildenborough   1 1
No Yes Shewanella sp. ANA-3   1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes NCBI 2017_08 genome   225 225
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   15 15
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   185 185
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28

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