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Multiheme cytochromes superfamily domain assignments
in
Brachypodium distachyon

Assignment details

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Brachypodium distachyon has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G11397.1   0.000013   271-356   Cytochrome c3-like  
 
Weak hits:
EG:BRADI1G03520.1   0.00576   175-229   Di-heme elbow motif  
EG:BRADI1G13970.2   0.0146   7-17,64-105   Di-heme elbow motif  
EG:BRADI1G67067.1   0.1   59-73,130-169   Di-heme elbow motif  
EG:BRADI1G71790.1   0.1   169-197   Di-heme elbow motif  
EG:BRADI1G78240.1   0.0837   23-46   Cytochrome c3-like  
EG:BRADI2G14750.1   0.0698   781-826   Cytochrome c3-like  
EG:BRADI2G40770.1   0.000779   378-395,555-560   Cytochrome c3-like  
  0.00209   381-436   Di-heme elbow motif  
EG:BRADI2G40770.2   0.000248   379-426   Cytochrome c3-like  
EG:BRADI2G50670.1   0.0303   41-97   Cytochrome c3-like  
EG:BRADI3G16400.1   0.000251   30-128   Di-heme elbow motif  
EG:BRADI3G49400.1   0.00658   233-332   Di-heme elbow motif  
EG:BRADI3G49400.2   0.00314   142-241   Di-heme elbow motif  
EG:BRADI4G02040.1   0.00023   19-108   Cytochrome c3-like  
EG:BRADI4G03302.1   0.00233   445-505   Cytochrome c3-like  
EG:BRADI4G26600.1   0.0994   385-429   Di-heme elbow motif  
EG:BRADI4G42580.1   0.000159   149-163,249-284   Cytochrome c3-like  
EG:BRADI5G01160.1   0.00155   131-145,231-266   Cytochrome c3-like  
EG:BRADI5G19510.1   0.0712   8-36   Cytochrome c3-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   237722 237722
No Yes Homo sapiens 76_38 Human 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Mus musculus 76_38 House mouse 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 1 1
No Yes Saccoglossus kowalevskii v3.0   5 5
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 4 3
No Yes Anolis carolinensis 76_2.0 Green anole 1 1
No Yes Xenopus laevis African clawed frog 6 6
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 4 4
No Yes Lepisosteus oculatus 76 Spotted gar 2 2
No Yes Gadus morhua 76_1 Atlantic cod 2 2
No Yes Takifugu rubripes 76_4 Torafugu 3 3
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 2 2
No Yes Poecilia formosa 76 Amazon molly 2 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1 1
No Yes Astyanax mexicanus 76 Mexican tetra 2 2
No Yes Danio rerio 76_9 Zebrafish 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2 2
No Yes Adineta vaga   2 2
No Yes Octopus bimaculoides 280   3 3
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 3 3
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 2
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 1 1
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Meloidogyne hapla   2 1
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 2 2
No Yes Caenorhabditis briggsae 2   2 2
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   1 1
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 4 4
No Yes Hydra vulgaris   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Capsaspora owczarzaki ATCC 30864   3 3
No Yes Phycomyces blakesleeanus   3 3
No Yes Rhizopus oryzae RA 99-880   2 2
No Yes Mucor circinelloides   1 1
No Yes Rhizomucor miehei CAU432   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   2 2
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Pisolithus microcarpus 441 v1.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   2 2
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Podospora anserina   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Pichia pastoris GS115   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Catenaria anguillulae PL171 v1.0   3 3
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   3 3
No Yes Dictyostelium purpureum   1 1
No Yes Entamoeba invadens 1.2   2 2
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   5 5
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 4 4
No Yes Thellungiella halophila v173   3 3
No Yes Capsella rubella v183   2 2
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 3 3
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 4 4
No Yes Cucumis sativus v122 Cucumber 6 6
No Yes Fragaria vesca Wild strawberry 2 2
No Yes Malus domestica v196 Apple 1 1
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 3 3
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 2 2
No Yes Solanum tuberosum Potato 6 6
No Yes Aquilegia coerulea v195   5 5
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 4 4
No Yes Oryza meridionalis 22   3 3
No Yes Oryza glumaepatula 22   2 2
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   3 3
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 5 5
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 2 2
No Yes Sorghum bicolor Sorghum 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 5 5
No Yes Amborella trichopoda 22   2 2
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   3 3
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Ectocarpus siliculosus   2 2
No Yes Albugo laibachii 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   1 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Paramecium tetraurelia   4 4
No Yes Tetrahymena thermophila SB210 1   3 3
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Leptolyngbya sp. PCC 7376   2 2
No Yes Pseudanabaena sp. PCC 7367   2 2
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Anabaena sp. 90   1 1
No Yes Cryptobacterium curtum DSM 15641   4 4
No Yes Eggerthella sp. YY7918   10 10
No Yes Eggerthella lenta DSM 2243   19 19
No Yes Slackia heliotrinireducens DSM 20476   9 9
No Yes Ilumatobacter coccineus   1 1
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Propionibacterium propionicum F0230a   2 2
No Yes Actinoplanes sp. N902-109   1 1
No Yes Corynebacterium ulcerans 0102   2 2
No Yes Corynebacterium pseudotuberculosis 316   2 2
No Yes Intrasporangium calvum DSM 43043   5 5
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Arcanobacterium haemolyticum DSM 20595   2 2
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   3 3
No Yes Dehalococcoides ethenogenes 195   1 1
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   4 4
No Yes Anaerolinea thermophila UNI-1   9 8
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Sphaerobacter thermophilus DSM 20745   2 2
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Roseiflexus sp. RS-1   3 3
No Yes Roseiflexus castenholzii DSM 13941   3 3
No Yes Chloroflexus sp. MS-G   3 3
No Yes Chloroflexus sp. Y-400-fl   3 3
No Yes Chloroflexus aggregans DSM 9485   4 4
No Yes Chloroflexus aurantiacus J-10-fl   3 3
No Yes Truepera radiovictrix DSM 17093   2 2
No Yes Oceanithermus profundus DSM 14977   7 6
No Yes Marinithermus hydrothermalis DSM 14884   2 2
No Yes Meiothermus silvanus DSM 9946   2 2
No Yes Thermus sp. CCB_US3_UF1   2 2
No Yes Thermus scotoductus SA-01   3 3
No Yes Thermus thermophilus HB27   1 1
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Megasphaera elsdenii DSM 20460   1 1
No Yes Selenomonas sputigena ATCC 35185   2 2
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   3 3
No Yes Natranaerobius thermophilus JW/NM-WN-LF   2 2
No Yes Symbiobacterium thermophilum IAM 14863   3 3
No Yes Ruminococcus sp.   1 1
No Yes Sulfobacillus acidophilus DSM 10332   1 1
No Yes Thermincola potens JR   69 36
No Yes Pelotomaculum thermopropionicum SI   2 2
No Yes Desulfosporosinus acidiphilus SJ4   18 17
No Yes Desulfosporosinus orientis DSM 765   11 11
No Yes Desulfitobacterium hafniense Y51   17 17
No Yes Desulfitobacterium dehalogenans ATCC 51507   13 13
No Yes Desulfotomaculum reducens MI-1   3 3
No Yes Desulfotomaculum acetoxidans DSM 771   2 2
No Yes Desulfotomaculum kuznetsovii DSM 6115   3 3
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   4 4
No Yes Desulfotomaculum ruminis DSM 2154   2 2
No Yes Clostridium difficile 630   3 3
No Yes Clostridium saccharolyticum WM1   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   2 2
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   3 3
No Yes Heliobacterium modesticaldum Ice1   4 4
No Yes Alkaliphilus oremlandii OhILAs   5 5
No Yes Alkaliphilus metalliredigens QYMF   2 2
No Yes Clostridium sp. BNL1100   1 1
No Yes Clostridium novyi NT   2 2
No Yes Clostridium ljungdahlii DSM 13528   2 2
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium perfringens ATCC 13124   2 2
No Yes Clostridium cellulovorans 743B   1 1
No Yes Clostridium botulinum A str. ATCC 3502   2 2
No Yes Clostridium acetobutylicum ATCC 824   1 1
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Carboxydothermus hydrogenoformans Z-2901   24 17
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Ammonifex degensii KC4   6 5
No Yes Acetohalobium arabaticum DSM 5501   1 1
No Yes Halothermothrix orenii H 168   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Tetragenococcus halophilus NBRC 12172   1 1
No Yes Enterococcus sp. 7L76   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Bacillus selenitireducens MLS10   3 3
No Yes Solibacillus silvestris StLB046   1 1
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus sp. 1NLA3E   11 10
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   1 1
No Yes Staphylococcus lugdunensis HKU09-01   1 1
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Melioribacter roseus P3M   16 14
No Yes Ignavibacterium album JCM 16511   25 18
No Yes Pelodictyon phaeoclathratiforme BU-1   3 3
No Yes Chlorobium luteolum DSM 273   4 3
No Yes Chlorobium chlorochromatii CaD3   3 2
No Yes Chlorobium phaeobacteroides DSM 266   2 2
No Yes Chlorobium phaeovibrioides DSM 265   2 2
No Yes Chlorobium limicola DSM 245   3 3
No Yes Chlorobaculum parvum NCIB 8327   2 2
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   2 2
No Yes Prosthecochloris aestuarii DSM 271   2 2
No Yes Haliscomenobacter hydrossis DSM 1100   2 2
No Yes Saprospira grandis str. Lewin   2 2
No Yes Niastella koreensis GR20-10   5 5
No Yes Chitinophaga pinensis DSM 2588   6 6
No Yes Salinibacter ruber M8   1 1
No Yes Rhodothermus marinus DSM 4252   4 4
No Yes Flexibacter litoralis DSM 6794   2 2
No Yes Belliella baltica DSM 15883   3 3
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Marivirga tractuosa DSM 4126   3 3
No Yes Fibrella aestuarina   1 1
No Yes Leadbetterella byssophila DSM 17132   2 2
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Spirosoma linguale DSM 74   4 4
No Yes Runella slithyformis DSM 19594   3 3
No Yes Parabacteroides distasonis ATCC 8503   5 5
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Paludibacter propionicigenes WB4   3 2
No Yes Bacteroides sp. CF50   2 2
No Yes Prevotella melaninogenica ATCC 25845   2 2
No Yes Prevotella intermedia 17   2 2
No Yes Prevotella denticola F0289   2 2
No Yes Porphyromonas gingivalis ATCC 33277   2 2
No Yes Bacteroides thetaiotaomicron VPI-5482   3 3
No Yes Bacteroides fragilis YCH46   3 3
No Yes Pedobacter saltans DSM 12145   2 2
No Yes Solitalea canadensis DSM 3403   3 3
No Yes Pedobacter heparinus DSM 2366   2 2
No Yes Sphingobacterium sp. 21   3 3
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Candidatus Sulcia muelleri DMIN   1 1
No Yes Candidatus Sulcia muelleri SMDSEM   1 1
No Yes Owenweeksia hongkongensis DSM 17368   2 2
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Gramella forsetii KT0803   1 1
No Yes Lacinutrix sp. 5H-3-7-4   1 1
No Yes Maribacter sp. HTCC2170   14 9
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Croceibacter atlanticus HTCC2559   2 2
No Yes Aequorivita sublithincola DSM 14238   2 2
No Yes Zobellia galactanivorans   5 4
No Yes Muricauda ruestringensis DSM 13258   2 2
No Yes Cellulophaga algicola DSM 14237   3 3
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Polaribacter sp. MED152   2 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   3 3
No Yes Ornithobacterium rhinotracheale DSM 15997   3 3
No Yes Capnocytophaga canimorsus Cc5   4 4
No Yes Capnocytophaga ochracea DSM 7271   4 4
No Yes Weeksella virosa DSM 16922   2 2
No Yes Flavobacterium indicum GPTSA100-9   1 1
No Yes Flavobacterium psychrophilum JIP02/86   1 1
No Yes Flavobacterium branchiophilum FL-15   1 1
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Flavobacterium johnsoniae UW101   2 2
No Yes Blattabacterium sp. (Nauphoeta cinerea)   1 1
No Yes Blattabacterium sp. (Blattella germanica) str. Bge   1 1
No Yes Waddlia chondrophila WSU 86-1044   1 1
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Isosphaera pallida ATCC 43644   9 8
No Yes Planctomyces brasiliensis DSM 5305   7 7
No Yes Planctomyces limnophilus DSM 3776   3 3
No Yes Rhodopirellula baltica SH 1   22 20
No Yes Pirellula staleyi DSM 6068   4 4
No Yes Methylacidiphilum infernorum V4   3 3
No Yes Coraliomargarita akajimensis DSM 45221   9 9
No Yes Opitutus terrae PB90-1   16 12
No Yes Akkermansia muciniphila ATCC BAA-835   4 4
No Yes Turneriella parva DSM 21527   5 5
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   4 4
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Thermodesulfatator indicus DSM 15286   32 23
No Yes Thermodesulfobacterium sp. OPB45   9 7
No Yes Desulfurispirillum indicum S5   19 17
No Yes Calditerrivibrio nitroreducens DSM 19672   9 7
No Yes Denitrovibrio acetiphilus DSM 12809   41 35
No Yes Deferribacter desulfuricans SSM1   22 19
No Yes Flexistipes sinusarabici DSM 4947   28 18
No Yes Thermovibrio ammonificans HB-1   20 16
No Yes Desulfurobacterium thermolithotrophum DSM 11699   17 14
No Yes Sulfurihydrogenibium sp. YO3AOP1   3 3
No Yes Sulfurihydrogenibium azorense Az-Fu1   2 2
No Yes Persephonella marina EX-H1   17 15
No Yes Thermocrinis albus DSM 14484   1 1
No Yes Aquifex aeolicus VF5   3 3
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   11 8
No Yes Candidatus Solibacter usitatus Ellin6076   36 34
No Yes Granulicella tundricola MP5ACTX9   6 6
No Yes Granulicella mallensis MP5ACTX8   4 4
No Yes Candidatus Koribacter versatilis Ellin345   22 16
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Terriglobus roseus DSM 18391   4 4
No Yes Acidobacterium capsulatum ATCC 51196   6 5
No Yes Thermodesulfovibrio yellowstonii DSM 11347   11 10
No Yes Candidatus Nitrospira defluvii   7 7
No Yes Leptospirillum ferrooxidans C2-3   4 4
No Yes Sebaldella termitidis ATCC 33386   2 2
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes Candidatus Methylomirabilis oxyfera   13 11
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Bacteriovorax marinus SJ   2 2
No Yes Bdellovibrio bacteriovorus HD100   4 4
No Yes Nautilia profundicola AmH   6 5
No Yes Nitratifractor salsuginis DSM 16511   4 4
No Yes Sulfurospirillum deleyianum DSM 6946   9 9
No Yes Sulfurospirillum barnesii SES-3   7 7
No Yes Arcobacter sp. L   2 2
No Yes Arcobacter nitrofigilis DSM 7299   5 5
No Yes Arcobacter butzleri RM4018   3 3
No Yes Campylobacter hominis ATCC BAA-381   5 5
No Yes Campylobacter lari RM2100   5 5
No Yes Campylobacter curvus 525.92   7 6
No Yes Campylobacter concisus 13826   6 6
No Yes Campylobacter jejuni subsp. doylei 269.97   2 2
No Yes Campylobacter sp. 03-427   10 10
No Yes Campylobacter fetus subsp. fetus 82-40   7 7
No Yes uncultured Sulfuricurvum sp. RIFRC-1   3 3
No Yes Sulfuricurvum kujiense DSM 16994   5 5
No Yes Sulfurimonas autotrophica DSM 16294   7 5
No Yes Sulfurimonas denitrificans DSM 1251   4 4
No Yes Wolinella succinogenes DSM 1740   7 7
No Yes Helicobacter cetorum MIT 00-7128   3 3
No Yes Helicobacter bizzozeronii CIII-1   3 3
No Yes Helicobacter hepaticus ATCC 51449   4 4
No Yes Helicobacter mustelae 12198   3 3
No Yes Helicobacter felis ATCC 49179   3 3
No Yes Helicobacter cinaedi PAGU611   3 3
No Yes Nitratiruptor sp. SB155-2   5 4
No Yes Sulfurovum sp. NBC37-1   9 8
No Yes Desulfarculus baarsii DSM 2075   12 10
No Yes Desulfobacca acetoxidans DSM 11109   4 4
No Yes Syntrophus aciditrophicus SB   5 5
No Yes Desulfomonile tiedjei DSM 6799   24 22
No Yes Syntrophobacter fumaroxidans MPOB   11 11
No Yes Desulfurivibrio alkaliphilus AHT2   56 41
No Yes Desulfotalea psychrophila LSv54   6 6
No Yes Desulfobulbus propionicus DSM 2032   19 17
No Yes Desulfatibacillum alkenivorans AK-01   16 15
No Yes Desulfobacterium autotrophicum HRM2   17 17
No Yes Desulfococcus oleovorans Hxd3   16 15
No Yes Desulfohalobium retbaense DSM 5692   18 17
No Yes Desulfomicrobium baculatum DSM 4028   15 15
No Yes Desulfovibrio piezophilus   13 13
No Yes Desulfovibrio aespoeensis Aspo-2   15 14
No Yes Lawsonia intracellularis PHE/MN1-00   2 2
No Yes Desulfovibrio magneticus RS-1   17 17
No Yes Desulfovibrio alaskensis G20   14 13
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   17 16
No Yes Desulfovibrio salexigens DSM 2638   21 19
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   11 11
No Yes Desulfovibrio africanus str. Walvis Bay   17 17
No Yes Geobacter daltonii FRC-32   134 68
No Yes Geobacter sp. M21   113 75
No Yes Geobacter uraniireducens Rf4   171 89
No Yes Geobacter lovleyi SZ   51 45
No Yes Geobacter bemidjiensis Bem   100 65
No Yes Geobacter sulfurreducens KN400   116 74
No Yes Geobacter metallireducens GS-15   94 63
No Yes Pelobacter propionicus DSM 2379   16 14
No Yes Pelobacter carbinolicus DSM 2380   6 6
No Yes Haliangium ochraceum DSM 14365   38 26
No Yes Sorangium cellulosum 'So ce 56'   21 20
No Yes Anaeromyxobacter sp. Fw109-5   71 45
No Yes Anaeromyxobacter dehalogenans 2CP-1   68 54
No Yes Stigmatella aurantiaca DW4/3-1   11 11
No Yes Corallococcus coralloides DSM 2259   18 17
No Yes Myxococcus xanthus DK 1622   11 11
No Yes Myxococcus fulvus HW-1   13 13
No Yes Dechloromonas aromatica RCB   7 7
No Yes Thauera sp. MZ1T   9 9
No Yes Azoarcus sp. KH32C   27 22
No Yes Azoarcus sp. BH72   5 5
No Yes Aromatoleum aromaticum EbN1   1 1
No Yes Dechlorosoma suillum PS   5 5
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Laribacter hongkongensis HLHK9   2 2
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   3 3
No Yes beta proteobacterium CB   1 1
No Yes Thiomonas arsenitoxydans   2 2
No Yes Thiomonas intermedia K12   2 2
No Yes Rubrivivax gelatinosus IL144   5 5
No Yes Leptothrix cholodnii SP-6   19 13
No Yes Burkholderia xenovorans LB400   2 2
No Yes Ralstonia eutropha JMP134   3 3
No Yes Cupriavidus taiwanensis LMG 19424   2 2
No Yes Cupriavidus metallidurans CH34   2 2
No Yes Cupriavidus necator N-1   3 3
No Yes Ralstonia eutropha H16   4 4
No Yes Ralstonia pickettii 12D   2 2
No Yes Burkholderia sp. RPE64   2 2
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Polaromonas sp. JS666   1 1
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Rhodoferax ferrireducens T118   25 22
No Yes Acidovorax sp. KKS102   2 2
No Yes Comamonas testosteroni CNB-2   2 2
No Yes Bordetella petrii DSM 12804   3 3
No Yes Bordetella parapertussis 12822   2 2
No Yes Bordetella bronchiseptica RB50   2 2
No Yes Achromobacter xylosoxidans A8   2 2
No Yes Achromobacter xylosoxidans   3 3
No Yes Thiobacillus denitrificans ATCC 25259   2 2
No Yes Nitrosospira multiformis ATCC 25196   10 10
No Yes Nitrosomonas sp. Is79A3   9 9
No Yes Nitrosomonas eutropha C91   9 9
No Yes Nitrosomonas europaea ATCC 19718   8 8
No Yes Sideroxydans lithotrophicus ES-1   17 10
No Yes Gallionella capsiferriformans ES-2   5 5
No Yes Methylotenera versatilis 301   9 4
No Yes Methylotenera mobilis JLW8   2 1
No Yes Magnetococcus marinus MC-1   9 9
No Yes Caulobacter sp. K31   3 3
No Yes Sphingopyxis alaskensis RB2256   8 5
No Yes Novosphingobium sp. PP1Y   4 3
No Yes Novosphingobium aromaticivorans DSM 12444   5 4
No Yes Sphingobium sp. SYK-6   1 1
No Yes Sphingobium japonicum UT26S   6 4
No Yes Sphingobium chlorophenolicum L-1   6 4
No Yes Sphingomonas sp. MM-1   5 4
No Yes Sphingomonas wittichii RW1   6 5
No Yes Maricaulis maris MCS10   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Dinoroseobacter shibae DFL 12   4 4
No Yes Pseudovibrio sp. FO-BEG1   8 8
No Yes Jannaschia sp. CCS1   2 2
No Yes Ruegeria sp. TM1040   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Roseobacter litoralis Och 149   2 2
No Yes Roseobacter denitrificans OCh 114   2 2
No Yes Rhodobacter sphaeroides ATCC 17029   4 4
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   2 2
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Magnetospirillum magneticum AMB-1   13 12
No Yes Rhodospirillum centenum SW   4 4
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum lipoferum 4B   4 4
No Yes Azospirillum sp. B510   2 2
No Yes Azospirillum brasilense Sp245   5 5
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Micavibrio aeruginosavorus ARL-13   1 1
No Yes Starkeya novella DSM 506   3 3
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   2 2
No Yes Methylobacterium sp. 4-46   4 4
No Yes Methylobacterium populi BJ001   2 2
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Methylobacterium radiotolerans JCM 2831   3 3
No Yes Sinorhizobium fredii NGR234   2 2
No Yes Sinorhizobium medicae WSM419   5 5
No Yes Sinorhizobium meliloti AK83   3 3
No Yes Genome sequence of Rhizobium sp. strain IRBG74   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium tumefaciens str. C58   2 2
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocella silvestris BL2   2 2
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   5 5
No Yes Hyphomicrobium sp. MC1   6 5
No Yes Rhodopseudomonas palustris BisA53   3 3
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bradyrhizobium japonicum USDA 110   5 5
No Yes Bradyrhizobium sp. ORS 278   2 2
No Yes Methylocystis sp. SC2   4 4
No Yes Saccharophagus degradans 2-40   3 3
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Aggregatibacter aphrophilus NJ8700   6 6
No Yes Aggregatibacter actinomycetemcomitans D7S-1   5 5
No Yes Haemophilus somnus 129PT   4 4
No Yes Gallibacterium anatis UMN179   4 4
No Yes Pasteurella multocida subsp. multocida str. 3480   6 6
No Yes Haemophilus parasuis SH0165   4 4
No Yes Haemophilus ducreyi 35000HP   5 5
No Yes Haemophilus parainfluenzae T3T1   4 4
No Yes Haemophilus influenzae PittEE   5 5
No Yes Actinobacillus succinogenes 130Z   5 5
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   5 5
No Yes Oceanimonas sp. GK1   3 3
No Yes Aeromonas veronii B565   7 7
No Yes Aeromonas salmonicida subsp. salmonicida A449   6 6
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   9 9
No Yes Aliivibrio salmonicida LFI1238   5 5
No Yes Vibrio fischeri MJ11   8 8
No Yes Vibrio sp. Ex25   10 10
No Yes Vibrio harveyi ATCC BAA-1116   7 7
No Yes Vibrio parahaemolyticus RIMD 2210633   10 10
No Yes Vibrio splendidus LGP32   6 6
No Yes Vibrio anguillarum 775   4 4
No Yes Vibrio furnissii NCTC 11218   4 4
No Yes Vibrio vulnificus MO6-24/O   9 9
No Yes Vibrio cholerae O395   4 4
No Yes Photobacterium profundum SS9   13 12
No Yes Psychromonas ingrahamii 37   2 2
No Yes Psychromonas sp. CNPT3   4 4
No Yes Ferrimonas balearica DSM 9799   56 52
No Yes Shewanella piezotolerans WP3   34 34
No Yes Shewanella loihica PV-4   26 26
No Yes Shewanella halifaxensis HAW-EB4   39 37
No Yes Shewanella sediminis HAW-EB3   66 64
No Yes Shewanella denitrificans OS217   2 2
No Yes Shewanella pealeana ATCC 700345   39 37
No Yes Shewanella oneidensis MR-1   23 23
No Yes Shewanella baltica OS185   22 21
No Yes Shewanella woodyi ATCC 51908   24 24
No Yes Shewanella sp. MR-4   24 23
No Yes Shewanella amazonensis SB2B   21 21
No Yes Shewanella violacea DSS12   3 3
No Yes Shewanella frigidimarina NCIMB 400   24 24
No Yes Shewanella putrefaciens CN-32   22 22
No Yes Colwellia psychrerythraea 34H   8 8
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Glaciecola sp. 4H-3-7+YE-5   4 4
No Yes Marinobacter adhaerens HP15   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Hahella chejuensis KCTC 2396   4 3
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Methylomicrobium alcaliphilum   4 4
No Yes Methylomonas methanica MC09   3 2
No Yes Methylococcus capsulatus str. Bath   17 13
No Yes Pseudoxanthomonas spadix BD-a59   2 2
No Yes Pseudoxanthomonas suwonensis 11-1   2 2
No Yes Alkalilimnicola ehrlichii MLHE-1   2 2
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   5 5
No Yes Halorhodospira halophila SL1   7 7
No Yes Allochromatium vinosum DSM 180   7 7
No Yes Thiocystis violascens DSM 198   18 16
No Yes Nitrosococcus watsonii C-113   5 5
No Yes Nitrosococcus halophilus Nc4   6 6
No Yes Nitrosococcus oceani ATCC 19707   4 4
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)   1 1
No Yes Candidatus Vesicomyosocius okutanii HA   2 2
No Yes Providencia stuartii MRSN 2154   5 5
No Yes Edwardsiella ictaluri 93-146   7 7
No Yes Edwardsiella tarda EIB202   7 7
No Yes Yersinia pseudotuberculosis IP 31758   2 2
No Yes Yersinia pestis Pestoides F   2 2
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   3 3
No Yes Serratia sp. AS12   3 3
No Yes Serratia plymuthica AS9   3 3
No Yes Serratia proteamaculans 568   5 5
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   4 4
No Yes Pectobacterium sp. SCC3193   4 4
No Yes Pectobacterium atrosepticum SCRI1043   4 4
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   4 4
No Yes Pantoea sp. At-9b   3 3
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Escherichia blattae DSM 4481   4 4
No Yes Cronobacter turicensis z3032   2 2
No Yes Cronobacter sakazakii ES15   2 2
No Yes Shigella sonnei Ss046   6 6
No Yes Shigella flexneri 5 str. 8401   6 6
No Yes Shigella dysenteriae Sd197   3 3
No Yes Shigella boydii CDC 3083-94   5 5
No Yes Salmonella bongori NCTC 12419   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   4 4
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Escherichia fergusonii ATCC 35469   3 3
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   6 6
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   5 5
No Yes Citrobacter koseri ATCC BAA-895   5 5
No Yes Pseudomonas sp. UW4   3 3
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   2 2
No Yes Pseudomonas stutzeri A1501   4 4
No Yes Pseudomonas fulva 12-X   2 2
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas mendocina ymp   3 3
No Yes Pseudomonas aeruginosa UCBPP-PA14   3 3
No Yes Psychrobacter sp. PRwf-1   1 1
No Yes Thiomicrospira crunogena XCL-2   2 1
No Yes Cenarchaeum symbiosum A   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   1 1
No Yes Pyrolobus fumarii 1A   8 7
No Yes Hyperthermus butylicus DSM 5456   3 3
No Yes Ignicoccus hospitalis KIN4/I   4 4
No Yes Pyrobaculum sp. 1860   3 3
No Yes Pyrobaculum calidifontis JCM 11548   4 4
No Yes Pyrobaculum oguniense TE7   4 3
No Yes Methanosalsum zhilinae DSM 4017   3 2
No Yes Methanohalobium evestigatum Z-7303   4 3
No Yes Methanococcoides burtonii DSM 6242   5 4
No Yes Methanosarcina acetivorans C2A   2 2
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanohalophilus mahii DSM 5219   8 6
No Yes Methanoregula boonei 6A8   1 1
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Ferroglobus placidus DSM 10642   35 24
No Yes Archaeoglobus profundus DSM 5631   1 1
No Yes Archaeoglobus veneficus SNP6   15 14
No Yes Archaeoglobus fulgidus DSM 4304   4 4
No Yes Pyrococcus sp. ST04   1 1
No Yes Pyrococcus horikoshii OT3   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Natrialba magadii ATCC 43099   1 1
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 5 5
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 3 3
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Spiroplasma syrphidicola EA-1   1 1
No Yes Spiroplasma chrysopicola DF-1   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   7 6
No Yes Adlercreutzia equolifaciens DSM 19450   15 15
No Yes Frankia sp. CcI3   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Corynebacterium ulcerans BR-AD22   2 2
No Yes Corynebacterium ulcerans 809   2 2
No Yes Corynebacterium pseudotuberculosis 258   2 2
No Yes Corynebacterium pseudotuberculosis Cp162   2 2
No Yes Corynebacterium pseudotuberculosis P54B96   2 2
No Yes Corynebacterium pseudotuberculosis 267   2 2
No Yes Corynebacterium pseudotuberculosis 1/06-A   2 2
No Yes Corynebacterium pseudotuberculosis 42/02-A   2 2
No Yes Corynebacterium pseudotuberculosis 3/99-5   2 2
No Yes Corynebacterium pseudotuberculosis 31   2 2
No Yes Corynebacterium pseudotuberculosis CIP 52.97   2 2
No Yes Corynebacterium pseudotuberculosis PAT10   2 2
No Yes Corynebacterium pseudotuberculosis I19   2 2
No Yes Corynebacterium pseudotuberculosis FRC41   2 2
No Yes Corynebacterium pseudotuberculosis C231   2 2
No Yes Corynebacterium pseudotuberculosis 1002   2 2
No Yes Dehalococcoides mccartyi GY50   1 1
No Yes Dehalococcoides mccartyi DCMB5   2 2
No Yes Dehalococcoides mccartyi BTF08   1 1
No Yes Dehalococcoides sp. GT   1 1
No Yes Dehalococcoides sp. VS   1 1
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Chthonomonas calidirosea T49   1 1
No Yes Thermus oshimai JL-2   4 4
No Yes Thermus thermophilus JL-18   1 1
No Yes Thermus thermophilus SG0.5JP17-16   1 1
No Yes Thermus thermophilus HB8   1 1
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Sulfobacillus acidophilus TPY   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   11 11
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   12 12
No Yes Desulfitobacterium hafniense DCB-2   16 16
No Yes Desulfotomaculum gibsoniae DSM 7213   7 7
No Yes Clostridium difficile BI1   3 3
No Yes Clostridium difficile R20291   3 3
No Yes Clostridium difficile CD196   3 3
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   2 2
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum H04402 065   2 2
No Yes Clostridium botulinum F str. 230613   2 2
No Yes Clostridium botulinum F str. Langeland   2 2
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   2 2
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   2 2
No Yes Clostridium botulinum A str. ATCC 19397   2 2
No Yes Clostridium acetobutylicum DSM 1731   1 1
No Yes Clostridium acetobutylicum EA 2018   1 1
No Yes Thermacetogenium phaeum DSM 12270   3 3
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   2 2
No Yes Streptococcus equi subsp. zooepidemicus   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   1 1
No Yes Streptococcus pyogenes MGAS6180   1 1
No Yes Streptococcus pyogenes MGAS10394   1 1
No Yes Streptococcus thermophilus MN-ZLW-002   1 1
No Yes Streptococcus thermophilus ND03   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Staphylococcus lugdunensis N920143   1 1
No Yes Staphylococcus epidermidis ATCC 12228   1 1
No Yes Chlorobium phaeobacteroides BS1   3 3
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   2 2
No Yes Echinicola vietnamensis DSM 17526   3 3
No Yes Emticicia oligotrophica DSM 17448   9 4
No Yes Prevotella sp. oral taxon 299 str. F0039   2 2
No Yes Prevotella dentalis DSM 3688   2 2
No Yes Porphyromonas gingivalis TDC60   2 2
No Yes Porphyromonas gingivalis W83   2 2
No Yes Bacteroides xylanisolvens XB1A   3 3
No Yes Bacteroides fragilis 638R   5 5
No Yes Bacteroides fragilis NCTC 9343   3 3
No Yes Candidatus Sulcia muelleri CARI   1 1
No Yes Candidatus Sulcia muelleri GWSS   1 1
No Yes Nonlabens dokdonensis DSW-6   1 1
No Yes Psychroflexus torquis ATCC 700755   1 1
No Yes Riemerella anatipestifer RA-CH-2   3 3
No Yes Riemerella anatipestifer RA-CH-1   3 3
No Yes Riemerella anatipestifer RA-GD   3 3
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   3 3
No Yes Blattabacterium sp. (Panesthia angustipennis spadica) Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA   1 1
No Yes Blattabacterium sp. (Blaberus giganteus)   1 1
No Yes Blattabacterium sp. (Blatta orientalis) Blattabacterium sp. (Blatta orientalis) str. Tarazona   1 1
No Yes Blattabacterium sp. (Periplaneta americana) str. BPLAN   1 1
No Yes Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu   1 1
No Yes Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR   1 1
No Yes Singulisphaera acidiphila DSM 18658   15 12
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   4 4
No Yes Treponema pedis str. T A4   1 1
No Yes Leptospirillum ferriphilum ML-04   3 3
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   4 4
No Yes Arcobacter butzleri 7h1h   3 3
No Yes Arcobacter butzleri ED-1   3 3
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   3 3
No Yes Campylobacter jejuni RM1221   3 3
No Yes Campylobacter jejuni subsp. jejuni 00-2544   3 3
No Yes Campylobacter jejuni subsp. jejuni 00-2538   3 3
No Yes Campylobacter jejuni subsp. jejuni 00-2426   3 3
No Yes Campylobacter jejuni subsp. jejuni 00-2425   3 3
No Yes Campylobacter jejuni subsp. jejuni PT14   3 3
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   6 6
No Yes Campylobacter jejuni subsp. jejuni S3   3 3
No Yes Campylobacter jejuni subsp. jejuni M1   5 5
No Yes Campylobacter jejuni subsp. jejuni IA3902   3 3
No Yes Campylobacter jejuni subsp. jejuni 81116   5 5
No Yes Campylobacter jejuni subsp. jejuni 81-176   5 5
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   3 3
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   3 3
No Yes Campylobacter coli 76339   3 3
No Yes Campylobacter coli 15-537360   3 3
No Yes Campylobacter coli CVM N29710   3 3
No Yes Helicobacter cetorum MIT 99-5656   4 3
No Yes Desulfocapsa sulfexigens DSM 10523   40 34
No Yes Desulfobacula toluolica Tol2   19 18
No Yes Lawsonia intracellularis N343   2 2
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   28 28
No Yes Desulfovibrio vulgaris RCH1   17 16
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   19 18
No Yes Desulfovibrio vulgaris str. Hildenborough   17 16
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   15 14
No Yes Desulfovibrio desulfuricans ND132   19 17
No Yes Geobacter sp. M18   130 81
No Yes Geobacter sulfurreducens PCA   118 74
No Yes Sorangium cellulosum So0157-2   18 16
No Yes Anaeromyxobacter sp. K   67 55
No Yes Anaeromyxobacter dehalogenans 2CP-C   66 54
No Yes Myxococcus stipitatus DSM 14675   13 13
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Ralstonia pickettii 12J   3 3
No Yes Burkholderia sp. YI23   2 2
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia ambifaria MC40-6   2 2
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Variovorax paradoxus B4   2 2
No Yes Bordetella parapertussis Bpp5   2 2
No Yes Bordetella bronchiseptica MO149   2 2
No Yes Bordetella bronchiseptica 253   2 2
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   4 4
No Yes Nitrosomonas sp. AL212   10 10
No Yes Sulfuricella denitrificans skB26   16 10
No Yes Leisingera methylohalidivorans DSM 14336   2 2
No Yes Rhodobacter sphaeroides KD131   5 5
No Yes Rhodobacter sphaeroides ATCC 17025   4 4
No Yes Rhodobacter sphaeroides 2.4.1   6 6
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   11 11
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Micavibrio aeruginosavorus EPB   1 1
No Yes Methylobacterium extorquens DM4   3 3
No Yes Methylobacterium extorquens PA1   2 2
No Yes Sinorhizobium fredii USDA 257   2 2
No Yes Sinorhizobium fredii HH103   2 2
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   7 7
No Yes Sinorhizobium meliloti Rm41   6 6
No Yes Sinorhizobium meliloti SM11   7 7
No Yes Sinorhizobium meliloti BL225C   5 5
No Yes Sinorhizobium meliloti 1021   6 6
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   2 2
No Yes Hyphomicrobium nitrativorans NL23   3 3
No Yes Rhodopseudomonas palustris DX-1   2 2
No Yes Rhodopseudomonas palustris TIE-1   2 2
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   2 2
No Yes Rhodopseudomonas palustris BisB18   8 7
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   5 5
No Yes Bradyrhizobium sp. BTAi1   7 7
No Yes Bradyrhizobium oligotrophicum S58   16 5
No Yes Bradyrhizobium japonicum USDA 6   3 3
No Yes Simiduia agarivorans SA1 = DSM 21679   6 5
No Yes Mannheimia succiniciproducens MBEL55E   5 5
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   5 5
No Yes Aggregatibacter actinomycetemcomitans ANH9381   5 5
No Yes Aggregatibacter actinomycetemcomitans D11S-1   5 5
No Yes Haemophilus somnus 2336   4 4
No Yes Mannheimia haemolytica USMARC_2286   6 6
No Yes Mannheimia haemolytica M42548   6 6
No Yes Mannheimia haemolytica D174   6 6
No Yes Mannheimia haemolytica D171   6 6
No Yes Mannheimia haemolytica D153   6 6
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   6 6
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   6 6
No Yes Pasteurella multocida 36950   6 6
No Yes Pasteurella multocida subsp. multocida str. HN06   6 6
No Yes Pasteurella multocida subsp. multocida str. Pm70   5 5
No Yes Haemophilus parasuis ZJ0906   4 4
No Yes Haemophilus influenzae KR494   5 5
No Yes Haemophilus influenzae F3047   5 5
No Yes Haemophilus influenzae F3031   4 4
No Yes Haemophilus influenzae 10810   4 4
No Yes Haemophilus influenzae PittGG   5 5
No Yes Haemophilus influenzae 86-028NP   4 4
No Yes Haemophilus influenzae R2866   5 5
No Yes Haemophilus influenzae R2846   5 5
No Yes Haemophilus influenzae Rd KW20   5 5
No Yes Actinobacillus suis H91-0380   5 5
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   5 5
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   5 5
No Yes Aeromonas hydrophila ML09-119   10 10
No Yes Vibrio fischeri ES114   8 8
No Yes Vibrio sp. EJY3   8 7
No Yes Vibrio parahaemolyticus BB22OP   9 9
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   7 7
No Yes Vibrio anguillarum Listonella anguillarum M3   4 4
No Yes Vibrio nigripulchritudo VibrioScope   5 5
No Yes Vibrio vulnificus CMCP6   9 9
No Yes Vibrio vulnificus YJ016   9 9
No Yes Vibrio cholerae LMA3984-4   4 4
No Yes Vibrio cholerae M66-2   4 4
No Yes Vibrio cholerae O395   4 4
No Yes Vibrio cholerae IEC224   4 4
No Yes Vibrio cholerae O1 str. 2010EL-1786   4 4
No Yes Vibrio cholerae MJ-1236   4 4
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   4 4
No Yes Shewanella sp. W3-18-1   20 20
No Yes Shewanella sp. ANA-3   22 22
No Yes Shewanella baltica BA175   18 17
No Yes Shewanella baltica OS678   22 21
No Yes Shewanella baltica OS117   19 18
No Yes Shewanella baltica OS223   19 18
No Yes Shewanella baltica OS195   22 21
No Yes Shewanella baltica OS155   19 18
No Yes Shewanella sp. MR-7   23 23
No Yes Shewanella putrefaciens 200   25 25
No Yes Glaciecola psychrophila 170   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   2 2
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   2 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Alcanivorax dieselolei B5   1 1
No Yes Thalassolituus oleivorans MIL-1   7 5
No Yes Thioalkalivibrio nitratireducens DSM 14787   10 9
No Yes Thioflavicoccus mobilis 8321   10 9
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Edwardsiella tarda C07-087   7 7
No Yes Edwardsiella tarda FL6-60   7 7
No Yes Yersinia pseudotuberculosis PB1/+   2 2
No Yes Yersinia pseudotuberculosis YPIII   2 2
No Yes Yersinia pseudotuberculosis IP 32953   2 2
No Yes Yersinia pestis biovar Microtus str. 91001   2 2
No Yes Yersinia pestis A1122   2 2
No Yes Yersinia pestis Z176003   2 2
No Yes Yersinia pestis D182038   2 2
No Yes Yersinia pestis D106004   2 2
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   2 2
No Yes Yersinia pestis Nepal516   2 2
No Yes Yersinia pestis Antiqua   2 2
No Yes Yersinia pestis Angola   2 2
No Yes Yersinia pestis CO92   2 2
No Yes Yersinia pestis KIM10+   2 2
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   5 5
No Yes Yersinia enterocolitica subsp. palearctica Y11   5 5
No Yes Serratia sp. AS13   3 3
No Yes Serratia plymuthica S13   3 3
No Yes Serratia plymuthica 4Rx13   3 3
No Yes Serratia marcescens FGI94   4 4
No Yes Serratia marcescens WW4   2 2
No Yes Serratia liquefaciens ATCC 27592   5 5
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   4 4
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Cronobacter sakazakii CMCC 45402   2 2
No Yes Cronobacter sakazakii SP291   2 2
No Yes Cronobacter sakazakii ATCC BAA-894   3 3
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   6 6
No Yes Shigella flexneri 2002017   6 6
No Yes Shigella flexneri 2a str. 2457T   6 6
No Yes Shigella flexneri 2a str. 301   7 7
No Yes Shigella dysenteriae 1617   4 4
No Yes Shigella boydii Sb227   5 5
No Yes Salmonella bongori N268-08   3 3
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   5 5
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   5 5
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   5 5
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   5 5
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   5 5
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   5 5
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   5 5
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   5 5
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   5 5
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   6 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   5 5
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   5 5
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   5 5
No Yes Salmonella enterica serovar Bovismorbificans genomics   5 5
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   5 5
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   5 5
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   5 5
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   5 5
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   5 5
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   5 5
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   5 5
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   5 5
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   5 5
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   5 5
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   5 5
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   4 4
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   4 4
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   4 4
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   5 5
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   5 5
No Yes Klebsiella oxytoca KCTC 1686   2 2
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Enterobacter aerogenes EA1509E   3 3
No Yes Escherichia coli E24377A   6 6
No Yes Escherichia coli E. coli PMV-1   6 6
No Yes Escherichia coli JJ1886   6 6
No Yes Escherichia coli LY180   6 6
No Yes Escherichia coli APEC O78   6 6
No Yes Escherichia coli O7:K1 str. CE10   6 6
No Yes Escherichia coli O104:H4 str. 2009EL-2050   6 6
No Yes Escherichia coli O104:H4 str. 2009EL-2071   6 6
No Yes Escherichia coli O104:H4 str. 2011C-3493   6 6
No Yes Escherichia coli NA114   6 6
No Yes Escherichia coli P12b   6 6
No Yes Escherichia coli str. 'clone D i2'   6 6
No Yes Escherichia coli str. 'clone D i14'   6 6
No Yes Escherichia coli UM146   6 6
No Yes Escherichia coli 042   6 6
No Yes Escherichia coli Xuzhou21   6 6
No Yes Escherichia coli IHE3034   6 6
No Yes Escherichia coli UMNK88   7 7
No Yes Escherichia coli O83:H1 str. NRG 857C   6 6
No Yes Escherichia coli ABU 83972   6 6
No Yes Escherichia coli KO11FL   6 6
No Yes Escherichia coli KO11FL   6 6
No Yes Escherichia coli LF82   6 6
No Yes Escherichia coli ED1a   6 6
No Yes Escherichia coli IAI39   6 6
No Yes Escherichia coli UMN026   6 6
No Yes Escherichia coli 55989   6 6
No Yes Escherichia coli S88   6 6
No Yes Escherichia coli IAI1   6 6
No Yes Escherichia coli W   6 6
No Yes Escherichia coli W   6 6
No Yes Escherichia coli DH1   6 6
No Yes Escherichia coli DH1   6 6
No Yes Escherichia coli ATCC 8739   6 6
No Yes Escherichia coli BL21(DE3)   6 6
No Yes Escherichia coli BL21(DE3)   6 6
No Yes Escherichia coli SMS-3-5   6 6
No Yes Escherichia coli SE15   6 6
No Yes Escherichia coli SE11   6 6
No Yes Escherichia coli APEC O1   6 6
No Yes Escherichia coli O103:H2 str. 12009   6 6
No Yes Escherichia coli UTI89   6 6
No Yes Escherichia coli 536   6 6
No Yes Escherichia coli HS   6 6
No Yes Escherichia coli ETEC H10407   6 6
No Yes Escherichia coli O55:H7 str. RM12579   6 6
No Yes Escherichia coli O55:H7 str. CB9615   6 6
No Yes Escherichia coli O26:H11 str. 11368   6 6
No Yes Escherichia coli CFT073   6 6
No Yes Escherichia coli O111:H- str. 11128   6 6
No Yes Escherichia coli O127:H6 str. E2348/69   6 6
No Yes Escherichia coli O157:H7 str. TW14359   6 6
No Yes Escherichia coli O157:H7 str. EC4115   6 6
No Yes Escherichia coli O157:H7 str. Sakai   6 6
No Yes Escherichia coli O157:H7 str. EDL933   6 6
No Yes Escherichia coli str. K-12 substr. MDS42   6 6
No Yes Escherichia coli BW2952   6 6
No Yes Escherichia coli str. K-12 substr. MG1655   6 6
No Yes Escherichia coli str. K-12 substr. W3110   6 6
No Yes Escherichia coli str. K-12 substr. DH10B   5 5
No Yes Escherichia coli B str. REL606   6 6
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Pseudomonas denitrificans ATCC 13867   2 2
No Yes Pseudomonas stutzeri CCUG 29243   3 3
No Yes Pseudomonas stutzeri DSM 10701   3 3
No Yes Pseudomonas stutzeri DSM 4166   4 4
No Yes Pseudomonas stutzeri RCH2   4 4
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   2 2
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida NBRC 14164   2 2
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas fluorescens F113   2 2
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   6 6
No Yes Pseudomonas mendocina NK-01   3 3
No Yes Pseudomonas aeruginosa SCV20265   3 3
No Yes Pseudomonas aeruginosa MTB-1   3 3
No Yes Pseudomonas aeruginosa LES431   3 3
No Yes Pseudomonas aeruginosa RP73   3 3
No Yes Pseudomonas aeruginosa B136-33   3 3
No Yes Pseudomonas aeruginosa PA1R   3 3
No Yes Pseudomonas aeruginosa PA1   3 3
No Yes Pseudomonas aeruginosa DK2   3 3
No Yes Pseudomonas aeruginosa NCGM2.S1   3 3
No Yes Pseudomonas aeruginosa M18   3 3
No Yes Pseudomonas aeruginosa LESB58   3 3
No Yes Pseudomonas aeruginosa PA7   4 4
No Yes Pseudomonas aeruginosa PAO1   3 3
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanomethylovorans hollandica DSM 15978   3 2
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Natronococcus occultus SP4   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1 1
No Yes Homo sapiens (NCBI version) Human 1 1
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   5 5
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 2
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 2 2
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   7 7
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1 1
No Yes Anolis carolinensis 69_2.0 Green anole 1 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 3 3
No Yes Gadus morhua 69_1 Atlantic cod 2 2
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 2 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 1 1
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome)   26 26
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   55 49
No Yes 2_Base_of_chrolophyll_max (meta-genome)   3 3
No Yes 3_050719R (meta-genome)   46 46
No Yes 3_Below_base_of_euphotic (meta-genome)   3 3
No Yes 4_050719Q (meta-genome)   49 44
No Yes 4_Deep_abyss (meta-genome)   6 6
No Yes 5_050719P (meta-genome)   55 53
No Yes 5_Below_upper_mesopelagic (meta-genome)   4 4
No Yes 6_Upper_euphotic (meta-genome)   2 2
No Yes 7_Oxygen_minimum_layer (meta-genome)   6 6
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   5 5
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   4 4
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   5 4
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   9 9
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   11 11
No Yes Combined (meta-genome)   40 40
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   35 35
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   5 5
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   6 6
No Yes Dump bottom (Dump bottom) (meta-genome)   63 63
No Yes Dump top (Dump top) (meta-genome)   56 55
No Yes Endophytic microbiome from Rice (meta-genome)   8 8
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   47 46
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   28 27
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   14 14
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   150 146
No Yes Fungus garden combined (combined) (meta-genome)   21 21
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   39 39
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   44 44
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   58 53
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   10 10
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   14 14
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   22 20
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   6 6
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   43 40
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   22 22
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   55 52
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   70 66
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   62 59
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   30 29
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   58 56
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   52 51
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   29 29
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   36 36
No Yes Human Gut Community Subject 7 (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   5 5
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   4 4
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   86 86
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   71 71
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   46 44
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   586 556
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   180 174
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   38 36
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   158 149
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   145 139
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   68 65
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   121 121
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   91 91
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes Mouse Gut Community lean1 (meta-genome)   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   164683 161788
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   88 85
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   29 26
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   16 13
No Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   8 7
No Yes Protozoadb 2010_08 (Protozoadb)   9 9
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   110 110
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   75 75
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   78 78
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   17 16
No Yes Sludge/US, Jazz Assembly (meta-genome)   8 8
No Yes Sludge/US, Phrap Assembly (meta-genome)   17 17
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   203 198
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   560 552
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   69 69
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   31 31
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   31 31
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   285 282
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   304 303
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   72 68
No Yes STRING v9.0.5 (STRING)   3410 2956
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   65 65
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   204 199
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   66 66
No Yes Termite Protist Endosymbiont Community (meta-genome)   7 7
No Yes Uniprot 2018_03 genome   49980 45327
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   62 58
No Yes Global Ocean Sampling Expedition (GOS)   1140 1120
No Yes NCBI plasmid sequences (Plasmids)   125 119
No Yes NCBI viral sequences (Viral)   9 9
No Yes PDB chains (SCOP 1.75) (PDB)   58 58
No Yes Protein Data Bank (all PDB sequenc)   407 352
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1056 1004
No Yes TargetDB (Targets)   125 117
No Yes The Salmonella enterica Pan-genome (meta-genome)   153 153
No Yes UniProt viral sequences (Viral)   2 2

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