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Fibronectin type III family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   124187 124187
No Yes Homo sapiens 76_38 Human 549 285
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 109 56
No Yes Gorilla gorilla 76_3.1 Western gorilla 151 84
No Yes Pongo abelii 76_2 Sumatran orangutan 130 68
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 131 63
No Yes Papio anubis 76 Olive baboon 125 66
No Yes Macaca mulatta 76_1 Rhesus monkey 224 111
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 270 151
No Yes Otolemur garnettii 76_3 Small-eared galago 111 62
No Yes Microcebus murinus 76_1 Gray mouse lemur 88 47
No Yes Rattus norvegicus 76_5.0 Norway rat 136 82
No Yes Mus musculus 76_38 House mouse 292 157
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 80 46
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 103 59
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 100 58
No Yes Cavia porcellus 76_3 Domestic guinea pig 147 73
No Yes Oryctolagus cuniculus 76_2 Rabbit 114 62
No Yes Ochotona princeps 76 American pika 96 53
No Yes Tupaia belangeri 76 Northern tree shrew 72 42
No Yes Sus scrofa 76_10.2 Pig 126 81
No Yes Bos taurus 76_3.1 Cattle 129 65
No Yes Ovis aries 76_3.1 Sheep 124 64
No Yes Vicugna pacos 76_1 Alpaca 52 30
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 103 54
No Yes Mustela putorius furo 76_1.0 Domestic ferret 112 61
No Yes Ailuropoda melanoleuca 76_1 Giant panda 134 70
No Yes Canis familiaris 76_3.1 Dog 169 92
No Yes Felis catus 76_6.2 Domestic cat 119 64
No Yes Equus caballus 76_2 Horse 168 84
No Yes Myotis lucifugus 76_2.0 Little brown bat 97 53
No Yes Pteropus vampyrus 76_1 Large flying fox 95 53
No Yes Sorex araneus 76_1 European shrew 57 29
No Yes Erinaceus europaeus 76 Western European hedgehog 73 41
No Yes Procavia capensis 76_1 Cape rock hyrax 83 50
No Yes Loxodonta africana 76_3 African savanna elephant 175 90
No Yes Echinops telfairi 76 Small Madagascar hedgehog 71 43
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 113 64
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 49 29
No Yes Macropus eugenii 76_1.0 Tammar wallaby 79 48
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 119 69
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 107 57
No Yes Ornithorhynchus anatinus 76_5 Platypus 88 58
No Yes Saccoglossus kowalevskii v3.0   61 32
No Yes Petromyzon marinus 76_7.0 Sea lamprey 23 13
No Yes Meleagris gallopavo 76_2 Turkey 104 67
No Yes Gallus gallus 76_4 Chicken 103 58
No Yes Anas platyrhynchos 76_1.0 Mallard 91 50
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 80 48
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 98 58
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 101 60
No Yes Anolis carolinensis 76_2.0 Green anole 84 53
No Yes Xenopus laevis African clawed frog 155 93
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 85 48
No Yes Latimeria chalumnae 76_1 Coelacanth 81 48
No Yes Lepisosteus oculatus 76 Spotted gar 122 71
No Yes Gadus morhua 76_1 Atlantic cod 96 70
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 145 88
No Yes Takifugu rubripes 76_4 Torafugu 444 293
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 104 74
No Yes Oryzias latipes 76_1 Japanese medaka 96 66
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 93 60
No Yes Poecilia formosa 76 Amazon molly 106 65
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 150 99
No Yes Astyanax mexicanus 76 Mexican tetra 104 62
No Yes Danio rerio 76_9 Zebrafish 205 120
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 30 13
No Yes Ciona intestinalis 76 Vase tunicate 7 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   6 4
No Yes Octopus bimaculoides 280   2 2
No Yes Crassostrea gigas 22 Pacific oyster 5 3
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   2 2
No Yes Capitella sp. I   4 3
No Yes Danaus plexippus OGS1.0 Monarch butterfly 3 3
No Yes Heliconius melpomene Postman butterfly 2 2
No Yes Bombyx mori Domestic silkworm 4 4
No Yes Nasonia vitripennis Jewel wasp 5 5
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 17 17
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 3 3
No Yes Linepithema humile v1.1 Argentine ant 3 3
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 3 3
No Yes Solenopsis invicta v.2.2.3 Red fire ant 5 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 4
No Yes Atta cephalotes v1.1   4 4
No Yes Camponotus floridanus v3.3 Florida carpenter ant 5 5
No Yes Lucilia cuprina Australian sheep blowfly 4 4
No Yes Drosophila grimshawi 1.3   6 6
No Yes Drosophila willistoni 1.3   6 6
No Yes Drosophila pseudoobscura 2.13   6 6
No Yes Drosophila persimilis 1.3   5 5
No Yes Drosophila suzukii   6 6
No Yes Drosophila yakuba 1.3   5 5
No Yes Drosophila simulans 1.3   4 4
No Yes Drosophila sechellia 1.3   5 5
No Yes Drosophila melanogaster 76_5 Fruit fly 23 23
No Yes Drosophila erecta 1.3   5 5
No Yes Drosophila ananassae 1.3   6 6
No Yes Drosophila virilis 1.2   5 5
No Yes Drosophila mojavensis 1.3   6 6
No Yes Megaselia scalaris 22   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 6 6
No Yes Culex pipiens quinquefasciatus Southern house mosquito 4 4
No Yes Anopheles darlingi 22 American malaria mosquito 3 3
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 3
No Yes Tribolium castaneum 3.0 Red flour beetle 4 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 4
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   3 3
No Yes Daphnia pulex Common water flea 5 3
No Yes Strigamia maritima 22   10 7
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 4 4
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus   2 2
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Trichinella spiralis 22   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Trichoplax adhaerens   1 1
No Yes Catenulispora acidiphila DSM 44928   6 5
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   3 3
No Yes Streptomyces avermitilis MA-4680   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Cellulomonas fimi ATCC 484   2 2
No Yes [Cellvibrio] gilvus ATCC 13127   3 3
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Clostridium beijerinckii NCIMB 8052   2 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus sp. JDR-2   3 2
No Yes Paenibacillus mucilaginosus 3016   7 5
No Yes Paenibacillus polymyxa M1   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Croceibacter atlanticus HTCC2559   1 1
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Flavobacterium columnare ATCC 49512   4 3
No Yes Flavobacterium johnsoniae UW101   2 2
No Yes Stigmatella aurantiaca DW4/3-1   6 5
No Yes Corallococcus coralloides DSM 2259   3 2
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 89 58
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 19 19
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1
No Yes Streptomyces davawensis JCM 4913   4 4
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   2 2
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis orientalis HCCB10007   2 2
No Yes Paenibacillus sp. Y412MC10   2 2
No Yes Paenibacillus mucilaginosus KNP414   6 5
No Yes Paenibacillus mucilaginosus K02   6 4
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 581 305
No Yes Homo sapiens (NCBI version) Human 263 131
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 117 63
No Yes Homo sapiens 69_37 Human 134 68
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 109 56
No Yes Gorilla gorilla 69_3.1 Western gorilla 111 58
No Yes Pongo abelii 69_2 Sumatran orangutan 108 57
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 104 53
No Yes Macaca mulatta 69_1 Rhesus monkey 110 56
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 111 59
No Yes Otolemur garnettii 69_3 Small-eared galago 110 61
No Yes Microcebus murinus 69_1 Gray mouse lemur 88 47
No Yes Rattus norvegicus 69_3.4 Norway rat 98 58
No Yes Mus musculus 69_38 House mouse 121 66
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 80 46
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 98 55
No Yes Cavia porcellus 69_3 Domestic guinea pig 112 60
No Yes Oryctolagus cuniculus 69_2 Rabbit 106 56
No Yes Ochotona princeps 69 American pika 96 53
No Yes Tupaia belangeri 69 Northern tree shrew 72 42
No Yes Sus scrofa 69_10.2 Pig 95 58
No Yes Bos taurus 69_3.1 Cattle 112 59
No Yes Vicugna pacos 69_1 Alpaca 52 30
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 103 54
No Yes Mustela putorius furo 69_1.0 Domestic ferret 111 60
No Yes Ailuropoda melanoleuca 69_1 Giant panda 114 61
No Yes Canis familiaris 69_3.1 Dog 117 62
No Yes Felis catus 69 Domestic cat 75 43
No Yes Equus caballus 69_2 Horse 118 60
No Yes Myotis lucifugus 69_2.0 Little brown bat 97 53
No Yes Pteropus vampyrus 69_1 Large flying fox 95 53
No Yes Sorex araneus 69_1 European shrew 57 29
No Yes Erinaceus europaeus 69 Western European hedgehog 73 41
No Yes Procavia capensis 69_1 Cape rock hyrax 83 50
No Yes Loxodonta africana 69_3 African savanna elephant 114 59
No Yes Echinops telfairi 69 Small Madagascar hedgehog 71 43
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 67 40
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 49 29
No Yes Macropus eugenii 69_1.0 Tammar wallaby 79 48
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 95 56
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 101 56
No Yes Ornithorhynchus anatinus 69_5 Platypus 82 54
No Yes Petromyzon marinus 69_7.0 Sea lamprey 23 13
No Yes Meleagris gallopavo 69_2 Turkey 75 46
No Yes Gallus gallus 69_2 Chicken 78 45
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 79 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 77 45
No Yes Anolis carolinensis 69_2.0 Green anole 82 52
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 72 41
No Yes Latimeria chalumnae 69_1 Coelacanth 74 44
No Yes Gadus morhua 69_1 Atlantic cod 82 56
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 86 54
No Yes Takifugu rubripes 69_4 Torafugu 101 60
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 88 58
No Yes Oryzias latipes 69_1 Japanese medaka 86 56
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 93 60
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 104 67
No Yes Danio rerio 69_9 Zebrafish 111 63
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 8 3
No Yes Ciona intestinalis 69 Vase tunicate 7 2
No Yes Drosophila melanogaster 69_5 Fruit fly 5 5
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   3 3
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes NCBI 2017_08 genome   71041 40963
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   2501 1446
No Yes Uniprot 2018_03 genome   25820 15784
No Yes PDB chains (SCOP 1.75) (PDB)   172 117
No Yes Protein Data Bank (all PDB sequenc)   608 360
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1840 1835
No Yes TargetDB (Targets)   249 164

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