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PKD domain superfamily domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 287 significant domains in 170 proteins.

Showing genomes 151 to 175 of 715
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Rhodothermus marinus DSM 4252 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|268315879|ref|YP_003289598.1|   2.75e-24   115-199   PKD domain  
  1.2e-18   14-113   PKD domain  
gi|268316443|ref|YP_003290162.1|   0.000000000000068   277-376   PKD domain  
  0.00000000000102   205-273   PKD domain  
 
Weak hits:
gi|268315677|ref|YP_003289396.1|   0.00262   488-571   PKD domain  
gi|268315917|ref|YP_003289636.1|   0.0549   580-650   PKD domain  
gi|268317603|ref|YP_003291322.1|   0.00279   483-567   PKD domain  

Flexibacter litoralis DSM 6794 has 23 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|392395853|ref|YP_006432454.1|   0.000000000222   782-878   PKD domain  
  0.00000000157   899-974   PKD domain  
  0.0000628   974-1067   PKD domain  
gi|392396080|ref|YP_006432681.1|   0.000012   56-136   PKD domain  
gi|392397073|ref|YP_006433674.1|   0.000000000000275   370-453   PKD domain  
  0.000000157   632-714   PKD domain  
gi|392397188|ref|YP_006433789.1|   0.0000706   688-783   PKD domain  
  0.000196   586-639   PKD domain  
  0.00141   512-566   PKD domain  
  0.00239   648-711   PKD domain  
  0.0471   806-852   PKD domain  
  0.0876   438-475   PKD domain  
gi|392397557|ref|YP_006434158.1|   0.0000000000000068   805-880   PKD domain  
  0.0000000000000432   1236-1341   PKD domain  
  0.0000000000000719   960-1037   PKD domain  
  0.000000000000128   1083-1188   PKD domain  
  0.000000000693   1407-1513   PKD domain  
  0.0122   889-957   PKD domain  
gi|392397644|ref|YP_006434245.1|   9.68e-18   470-591   PKD domain  
  0.00000000000235   952-1044   PKD domain  
  0.00471   677-743   PKD domain  
gi|392397869|ref|YP_006434470.1|   0.000000209   40-81   PKD domain  
gi|392397875|ref|YP_006434476.1|   0.0000000000000183   32-112   PKD domain  
gi|392398138|ref|YP_006434739.1|   3.53e-19   1265-1335   PKD domain  
  2.09e-17   945-1011   PKD domain  
  0.0000000000000549   1069-1174   PKD domain  
  0.0000000000484   1421-1500   PKD domain  
gi|392398852|ref|YP_006435453.1|   0.000000222   35-97   PKD domain  
  0.0000876   133-172   PKD domain  
gi|392399233|ref|YP_006435834.1|   0.00000942   78-181   PKD domain  
 
Weak hits:
gi|392395891|ref|YP_006432492.1|   0.000163   759-805   PKD domain  
gi|392395892|ref|YP_006432493.1|   0.000746   760-807   PKD domain  
gi|392396674|ref|YP_006433275.1|   0.0373   107-139   PKD domain  
gi|392398464|ref|YP_006435065.1|   0.000144   2199-2247   PKD domain  
  0.00017   32-111   PKD domain  
  0.00239   1301-1360   PKD domain  
  0.00929   642-725   PKD domain  
  0.0471   2524-2599   PKD domain  
  0.0481   2643-2729   PKD domain  
  0.0618   2353-2424   PKD domain  
gi|392399188|ref|YP_006435789.1|   0.00942   1645-1716   PKD domain  
gi|392399374|ref|YP_006435975.1|   0.0118   1317-1380   PKD domain  

Belliella baltica DSM 15883 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|390942996|ref|YP_006406757.1|   0.000000000000119   541-603   PKD domain  
gi|390943011|ref|YP_006406772.1|   0.00000000000994   55-106   PKD domain  
gi|390943515|ref|YP_006407276.1|   2.75e-16   626-682   PKD domain  
 
Weak hits:
gi|390943052|ref|YP_006406813.1|   0.0157   727-839   PKD domain  
gi|390943373|ref|YP_006407134.1|   0.00165   1030-1137   PKD domain  
  0.00706   388-480   PKD domain  
gi|390944370|ref|YP_006408131.1|   0.00667   42-89   PKD domain  

Cyclobacterium marinum DSM 745 has 12 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|343083154|ref|YP_004772449.1|   0.0000000000183   821-893   PKD domain  
gi|343084477|ref|YP_004773772.1|   0.000000000000235   719-801   PKD domain  
gi|343085515|ref|YP_004774810.1|   0.000000114   917-987   PKD domain  
gi|343085528|ref|YP_004774823.1|   0.00000000000000889   615-670   PKD domain  
gi|343085919|ref|YP_004775214.1|   0.00000000445   621-689   PKD domain  
gi|343086264|ref|YP_004775559.1|   0.000000000000706   313-377   PKD domain  
gi|343086529|ref|YP_004775824.1|   0.00000000693   450-542   PKD domain  
gi|343086676|ref|YP_004775971.1|   5.1e-18   1701-1813   PKD domain  
gi|343086678|ref|YP_004775973.1|   2.88e-16   1692-1798   PKD domain  
gi|343086710|ref|YP_004776005.1|   6.15e-18   2104-2187   PKD domain  
  3.92e-17   1863-1940   PKD domain  
  6.54e-17   2347-2432   PKD domain  

Marivirga tractuosa DSM 4126 has 54 significant domains in 17 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|313674278|ref|YP_004052274.1|   1.44e-17   284-363   PKD domain  
  0.0000000275   47-111   PKD domain  
gi|313674279|ref|YP_004052275.1|   0.0000000785   25-111   PKD domain  
gi|313674324|ref|YP_004052320.1|   2.75e-20   2012-2090   PKD domain  
  0.00000000000327   2091-2183   PKD domain  
  0.00000000000379   1934-2011   PKD domain  
  0.0000000732   547-638   PKD domain  
  0.00000301   353-410   PKD domain  
  0.00000559   1164-1279   PKD domain  
gi|313674381|ref|YP_004052377.1|   0.000000000549   31-108   PKD domain  
  0.00000000183   197-275   PKD domain  
  0.00000000235   115-190   PKD domain  
gi|313674643|ref|YP_004052639.1|   0.000000000471   910-984   PKD domain  
  0.000000209   1231-1310   PKD domain  
gi|313674988|ref|YP_004052984.1|   0.000000000000618   3240-3363   PKD domain  
gi|313675119|ref|YP_004053115.1|   8.63e-20   476-590   PKD domain  
  1.05e-19   1253-1334   PKD domain  
  5.1e-18   1091-1169   PKD domain  
  1.44e-17   105-174   PKD domain  
  1.83e-16   982-1082   PKD domain  
  0.00000000000000144   1176-1250   PKD domain  
  0.0000000000000183   931-1008   PKD domain  
  0.000000000000628   1333-1414   PKD domain  
  0.000000000353   25-102   PKD domain  
  0.000000000576   193-258   PKD domain  
  0.00000288   875-919   PKD domain  
  0.000103   703-769   PKD domain  
  0.000126   772-851   PKD domain  
  0.000461   275-340   PKD domain  
  0.00169   397-503   PKD domain  
  0.0471   356-417   PKD domain  
gi|313675976|ref|YP_004053972.1|   0.0000000034   32-123   PKD domain  
  0.00000159   148-228   PKD domain  
gi|313675989|ref|YP_004053985.1|   0.0000000000746   563-678   PKD domain  
  0.00000000196   1427-1542   PKD domain  
  0.00000000298   1072-1187   PKD domain  
  0.00000458   172-253   PKD domain  
  0.0000111   2081-2152   PKD domain  
  0.000101   216-333   PKD domain  
  0.000131   942-1020   PKD domain  
  0.000157   337-419   PKD domain  
  0.000196   1942-2059   PKD domain  
  0.000262   2243-2326   PKD domain  
  0.000691   1595-1718   PKD domain  
  0.00604   1854-1964   PKD domain  
  0.00615   386-493   PKD domain  
  0.0106   502-594   PKD domain  
  0.0275   2497-2579   PKD domain  
gi|313676075|ref|YP_004054071.1|   5.62e-16   124-211   PKD domain  
gi|313676264|ref|YP_004054260.1|   2.22e-17   654-734   PKD domain  
  0.0000000000209   928-1010   PKD domain  
  0.0549   1029-1081   PKD domain  
gi|313676320|ref|YP_004054316.1|   2.09e-18   582-660   PKD domain  
  9.55e-18   1141-1223   PKD domain  
  0.00000000000000183   1303-1384   PKD domain  
  0.0000000000000811   419-499   PKD domain  
  0.000000000000497   1382-1471   PKD domain  
  0.0000000000012   1220-1285   PKD domain  
  0.0000000144   1073-1140   PKD domain  
  0.0000000366   1554-1637   PKD domain  
  0.0000000876   499-564   PKD domain  
  0.000000536   1688-1750   PKD domain  
  0.0000183   1471-1555   PKD domain  
  0.000523   347-417   PKD domain  
gi|313677236|ref|YP_004055232.1|   4.58e-16   700-802   PKD domain  
  0.0139   860-922   PKD domain  
gi|313677240|ref|YP_004055236.1|   0.000000000000732   392-462   PKD domain  
  0.0000719   1507-1604   PKD domain  
  0.00183   956-1046   PKD domain  
  0.0255   1030-1125   PKD domain  
gi|313677470|ref|YP_004055466.1|   4.58e-17   572-645   PKD domain  
  1.57e-16   496-567   PKD domain  
gi|313677709|ref|YP_004055705.1|   0.0000157   36-79   PKD domain  
gi|313677808|ref|YP_004055804.1|   0.0000000000157   56-100   PKD domain  
 
Weak hits:
gi|313674925|ref|YP_004052921.1|   0.000128   40-83   PKD domain  
gi|313675100|ref|YP_004053096.1|   0.00361   51-120   PKD domain  
gi|313675617|ref|YP_004053613.1|   0.0141   69-169   PKD domain  
gi|313677084|ref|YP_004055080.1|   0.0471   2170-2255   PKD domain  
gi|313677233|ref|YP_004055229.1|   0.00153   1038-1121   PKD domain  
gi|313677334|ref|YP_004055330.1|   0.000536   31-106   PKD domain  

Fibrella aestuarina has 15 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|436834042|ref|YP_007319258.1|   0.000052   152-251   PKD domain  
gi|436834507|ref|YP_007319723.1|   1.15e-16   545-634   PKD domain  
gi|436835253|ref|YP_007320469.1|   0.00000000000288   18-111   PKD domain  
gi|436835788|ref|YP_007321004.1|   7.06e-17   185-260   PKD domain  
gi|436835810|ref|YP_007321026.1|   0.000051   587-669   PKD domain  
  0.000369   747-829   PKD domain  
  0.000628   434-516   PKD domain  
  0.000706   668-749   PKD domain  
gi|436836051|ref|YP_007321267.1|   0.000000000085   53-117   PKD domain  
gi|436836320|ref|YP_007321536.1|   1.31e-20   716-805   PKD domain  
gi|436836387|ref|YP_007321603.1|   0.0000000981   759-833   PKD domain  
  0.0000379   926-988   PKD domain  
gi|436836576|ref|YP_007321792.1|   0.000000922   108-198   PKD domain  
gi|436837763|ref|YP_007322979.1|   3.92e-18   516-608   PKD domain  
gi|436837765|ref|YP_007322981.1|   0.0000412   1581-1658   PKD domain  
  0.00131   380-479   PKD domain  
  0.00145   995-1106   PKD domain  
  0.00549   1131-1189   PKD domain  
gi|436838069|ref|YP_007323285.1|   0.0000000000994   703-796   PKD domain  
gi|436838170|ref|YP_007323386.1|   0.000000314   1410-1482   PKD domain  
  0.000000902   1111-1185   PKD domain  
  0.0144   819-879   PKD domain  
  0.0667   1346-1404   PKD domain  
 
Weak hits:
gi|436833792|ref|YP_007319008.1|   0.0432   622-681   PKD domain  
gi|436834167|ref|YP_007319383.1|   0.011   681-743   PKD domain  
gi|436834199|ref|YP_007319415.1|   0.00186   238-324   PKD domain  
  0.0706   345-411   PKD domain  
gi|436834292|ref|YP_007319508.1|   0.00051   49-119   PKD domain  
gi|436834769|ref|YP_007319985.1|   0.0102   306-380   PKD domain  
gi|436835211|ref|YP_007320427.1|   0.0051   256-311   PKD domain  
gi|436835635|ref|YP_007320851.1|   0.000255   848-926   PKD domain  
  0.00155   1311-1389   PKD domain  
  0.0216   601-692   PKD domain  
gi|436835638|ref|YP_007320854.1|   0.0471   753-799   PKD domain  
gi|436835934|ref|YP_007321150.1|   0.0615   74-126   PKD domain  
gi|436836275|ref|YP_007321491.1|   0.00051   2611-2686   PKD domain  
  0.0157   2858-2931   PKD domain  
gi|436836861|ref|YP_007322077.1|   0.000128   60-125   PKD domain  
gi|436837094|ref|YP_007322310.1|   0.051   737-787   PKD domain  
gi|436838316|ref|YP_007323532.1|   0.0122   190-239   PKD domain  
gi|436838545|ref|YP_007323761.1|   0.0247   628-691   PKD domain  

Leadbetterella byssophila DSM 17132 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|312129887|ref|YP_003997227.1|   0.000000000889   692-783   PKD domain  
gi|312130678|ref|YP_003998018.1|   0.000000785   1018-1119   PKD domain  
  0.00000549   1094-1189   PKD domain  
  0.000216   890-969   PKD domain  
  0.000981   1224-1275   PKD domain  
gi|312130838|ref|YP_003998178.1|   0.00000196   33-109   PKD domain  
gi|312131294|ref|YP_003998634.1|   5.49e-16   179-257   PKD domain  
  0.00000000000000641   41-100   PKD domain  
  0.0000000000000327   120-176   PKD domain  
 
Weak hits:
gi|312129175|ref|YP_003996515.1|   0.00171   316-412   PKD domain  
  0.00228   1622-1725   PKD domain  
  0.00235   1312-1415   PKD domain  
  0.0053   241-336   PKD domain  
  0.00628   1777-1879   PKD domain  
  0.0235   1932-2031   PKD domain  
  0.0667   1393-1484   PKD domain  
gi|312131629|ref|YP_003998969.1|   0.049   44-105   PKD domain  

Dyadobacter fermentans DSM 18053 has 13 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|255034377|ref|YP_003084998.1|   0.000000000000314   22-108   PKD domain  
gi|255035274|ref|YP_003085895.1|   0.00000000000301   448-540   PKD domain  
gi|255035485|ref|YP_003086106.1|   0.00000000000000262   338-415   PKD domain  
gi|255035955|ref|YP_003086576.1|   0.00000000942   707-798   PKD domain  
gi|255036445|ref|YP_003087066.1|   0.0000000000235   1002-1075   PKD domain  
  0.0000000000929   761-838   PKD domain  
gi|255037438|ref|YP_003088059.1|   0.0000000000000392   31-94   PKD domain  
  0.0000000000157   549-622   PKD domain  
gi|255037751|ref|YP_003088372.1|   0.00000017   42-106   PKD domain  
gi|255038270|ref|YP_003088891.1|   0.00000000628   39-125   PKD domain  
gi|255038798|ref|YP_003089419.1|   1.27e-20   713-801   PKD domain  
gi|255039069|ref|YP_003089690.1|   0.0000000000209   484-567   PKD domain  
gi|255039424|ref|YP_003090045.1|   0.000000755   254-337   PKD domain  
  0.0549   499-564   PKD domain  
 
Weak hits:
gi|255034060|ref|YP_003084681.1|   0.0314   85-112   PKD domain  
gi|255034165|ref|YP_003084786.1|   0.0667   426-475   PKD domain  
gi|255034345|ref|YP_003084966.1|   0.0667   724-766   PKD domain  
gi|255034997|ref|YP_003085618.1|   0.0114   477-550   PKD domain  
gi|255035279|ref|YP_003085900.1|   0.0127   764-810   PKD domain  
gi|255035632|ref|YP_003086253.1|   0.000785   123-225   PKD domain  
gi|255035947|ref|YP_003086568.1|   0.0145   175-216   PKD domain  
gi|255036553|ref|YP_003087174.1|   0.00824   386-451   PKD domain  
gi|255039029|ref|YP_003089650.1|   0.0216   195-232   PKD domain  

Cytophaga hutchinsonii ATCC 33406 has 58 significant domains in 31 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|110636776|ref|YP_676983.1|   0.00000379   528-622   PKD domain  
  0.00745   490-553   PKD domain  
gi|110636881|ref|YP_677088.1|   0.0000000000458   353-430   PKD domain  
gi|110637017|ref|YP_677224.1|   0.0000196   1194-1297   PKD domain  
  0.00589   824-923   PKD domain  
  0.0341   750-843   PKD domain  
  0.0589   676-774   PKD domain  
  0.0628   454-555   PKD domain  
  0.0902   602-706   PKD domain  
gi|110637371|ref|YP_677578.1|   0.0000000000000114   747-845   PKD domain  
gi|110637437|ref|YP_677644.1|   0.0000000235   921-1009   PKD domain  
  0.034   191-236   PKD domain  
gi|110637461|ref|YP_677668.1|   0.00000373   670-795   PKD domain  
  0.000942   960-1038   PKD domain  
  0.0785   1127-1202   PKD domain  
gi|110637462|ref|YP_677669.1|   0.00000000131   39-117   PKD domain  
gi|110637563|ref|YP_677770.1|   0.000000641   1035-1114   PKD domain  
  0.00000209   955-1032   PKD domain  
  0.00000706   875-953   PKD domain  
  0.0000118   795-873   PKD domain  
gi|110637570|ref|YP_677777.1|   0.00000314   357-442   PKD domain  
  0.000216   406-507   PKD domain  
  0.000275   560-666   PKD domain  
  0.000981   635-740   PKD domain  
gi|110637627|ref|YP_677834.1|   0.0000922   1442-1519   PKD domain  
  0.0011   1208-1269   PKD domain  
gi|110637643|ref|YP_677850.1|   0.0000432   1067-1184   PKD domain  
  0.00243   706-783   PKD domain  
  0.018   865-941   PKD domain  
  0.0235   425-507   PKD domain  
gi|110637644|ref|YP_677851.1|   0.0000216   734-816   PKD domain  
  0.00017   1125-1203   PKD domain  
  0.00017   270-372   PKD domain  
  0.00157   1212-1277   PKD domain  
  0.0114   968-1043   PKD domain  
gi|110637645|ref|YP_677852.1|   0.0000471   1538-1656   PKD domain  
  0.0000523   1335-1414   PKD domain  
  0.000353   1183-1260   PKD domain  
gi|110637865|ref|YP_678072.1|   0.0000182   306-374   PKD domain  
gi|110638036|ref|YP_678244.1|   0.0000385   557-642   PKD domain  
gi|110638198|ref|YP_678407.1|   0.0000471   418-481   PKD domain  
  0.0000589   317-395   PKD domain  
  0.0000922   447-564   PKD domain  
gi|110638436|ref|YP_678645.1|   0.0000353   841-910   PKD domain  
  0.000114   572-653   PKD domain  
  0.000863   743-824   PKD domain  
  0.00163   282-373   PKD domain  
gi|110638437|ref|YP_678646.1|   0.0000405   1424-1493   PKD domain  
  0.000177   1077-1158   PKD domain  
  0.000196   1293-1405   PKD domain  
  0.0011   796-878   PKD domain  
  0.00981   1220-1327   PKD domain  
gi|110638438|ref|YP_678647.1|   0.00000628   1056-1125   PKD domain  
  0.000129   709-790   PKD domain  
  0.00017   925-1037   PKD domain  
  0.00116   428-510   PKD domain  
  0.0051   852-959   PKD domain  
gi|110638439|ref|YP_678648.1|   0.0000314   1086-1155   PKD domain  
  0.000118   877-989   PKD domain  
  0.000216   955-1067   PKD domain  
  0.0012   372-462   PKD domain  
  0.00126   661-742   PKD domain  
  0.00243   802-911   PKD domain  
gi|110638440|ref|YP_678649.1|   0.00000523   1313-1382   PKD domain  
  0.000184   966-1047   PKD domain  
  0.000844   1215-1296   PKD domain  
  0.00085   1141-1216   PKD domain  
  0.00549   637-765   PKD domain  
gi|110638770|ref|YP_678979.1|   0.0000392   722-825   PKD domain  
  0.0000942   564-671   PKD domain  
  0.0000981   949-1070   PKD domain  
  0.00589   904-978   PKD domain  
gi|110638911|ref|YP_679120.1|   0.0000000000000262   950-1027   PKD domain  
gi|110638989|ref|YP_679198.1|   0.0000000000000249   445-530   PKD domain  
  0.0000000000000497   1155-1218   PKD domain  
  0.00000000000196   795-877   PKD domain  
  0.00000000000536   23-76   PKD domain  
  0.0000000000445   183-271   PKD domain  
  0.000000000085   851-940   PKD domain  
  0.0000000000929   961-1046   PKD domain  
  0.0000000000968   91-184   PKD domain  
  0.00000000034   635-699   PKD domain  
  0.00000000445   712-793   PKD domain  
  0.000000903   1018-1099   PKD domain  
  0.00000165   316-406   PKD domain  
  0.00157   497-618   PKD domain  
gi|110639059|ref|YP_679268.1|   0.000000889   34-111   PKD domain  
  0.00458   132-191   PKD domain  
gi|110639231|ref|YP_679440.1|   0.0000334   646-724   PKD domain  
gi|110639233|ref|YP_679442.1|   0.00000017   703-795   PKD domain  
  0.00000126   418-510   PKD domain  
  0.00000144   513-605   PKD domain  
  0.00000144   608-700   PKD domain  
  0.00000167   798-894   PKD domain  
gi|110639478|ref|YP_679687.1|   0.00000034   547-612   PKD domain  
gi|110639817|ref|YP_680027.1|   0.000000000000119   829-912   PKD domain  
  0.00000000157   1747-1827   PKD domain  
  0.00000118   1679-1741   PKD domain  
  0.0000471   1848-1929   PKD domain  
  0.00288   1258-1328   PKD domain  
  0.0288   1510-1572   PKD domain  
gi|110640081|ref|YP_680291.1|   4.32e-17   761-871   PKD domain  
  0.0000000000235   959-1023   PKD domain  
gi|110640167|ref|YP_680377.1|   0.00000824   509-598   PKD domain  
 
Weak hits:
gi|110636767|ref|YP_676974.1|   0.00275   176-249   PKD domain  
gi|110637565|ref|YP_677772.1|   0.000255   985-1090   PKD domain  
  0.000549   634-702   PKD domain  
  0.00412   791-863   PKD domain  
gi|110637929|ref|YP_678136.1|   0.000785   818-905   PKD domain  
gi|110637961|ref|YP_678168.1|   0.000549   3360-3438   PKD domain  
gi|110638257|ref|YP_678466.1|   0.018   683-734   PKD domain  
gi|110638545|ref|YP_678754.1|   0.000126   615-696   PKD domain  
  0.000196   773-854   PKD domain  
  0.000216   694-775   PKD domain  
  0.000235   536-617   PKD domain  
  0.000314   852-931   PKD domain  
  0.000432   465-538   PKD domain  
gi|110638788|ref|YP_678997.1|   0.000349   1103-1223   PKD domain  
  0.000667   1010-1130   PKD domain  
  0.00706   920-1038   PKD domain  
gi|110638915|ref|YP_679124.1|   0.000549   1812-1920   PKD domain  
  0.0051   1578-1687   PKD domain  
gi|110639161|ref|YP_679370.1|   0.0288   917-945   PKD domain  
gi|110639297|ref|YP_679506.1|   0.00192   767-875   PKD domain  
  0.0145   1095-1170   PKD domain  
  0.0942   567-640   PKD domain  
gi|110639593|ref|YP_679803.1|   0.0785   1806-1881   PKD domain  

Spirosoma linguale DSM 74 has 22 significant domains in 20 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|284034948|ref|YP_003384878.1|   0.00000536   573-657   PKD domain  
gi|284035163|ref|YP_003385093.1|   0.00000432   62-119   PKD domain  
gi|284035164|ref|YP_003385094.1|   0.00000209   61-128   PKD domain  
gi|284035268|ref|YP_003385198.1|   0.000000000000772   497-583   PKD domain  
gi|284035552|ref|YP_003385482.1|   0.000000153   586-673   PKD domain  
gi|284035605|ref|YP_003385535.1|   0.0000000249   26-103   PKD domain  
gi|284036817|ref|YP_003386747.1|   2.09e-16   485-573   PKD domain  
gi|284037847|ref|YP_003387777.1|   0.0000000000000157   29-102   PKD domain  
gi|284038191|ref|YP_003388121.1|   0.0000000000314   36-110   PKD domain  
gi|284038317|ref|YP_003388247.1|   1.7e-20   721-809   PKD domain  
gi|284038715|ref|YP_003388645.1|   0.00000000000000353   35-97   PKD domain  
gi|284038889|ref|YP_003388819.1|   0.00000000000471   775-848   PKD domain  
gi|284038958|ref|YP_003388888.1|   0.00000000405   28-102   PKD domain  
  0.0068   127-168   PKD domain  
gi|284039072|ref|YP_003389002.1|   1.96e-20   339-434   PKD domain  
gi|284039159|ref|YP_003389089.1|   0.00000412   819-891   PKD domain  
  0.0000549   895-970   PKD domain  
gi|284039519|ref|YP_003389449.1|   0.00000000000129   498-591   PKD domain  
gi|284039725|ref|YP_003389655.1|   1.44e-19   532-623   PKD domain  
gi|284040071|ref|YP_003390001.1|   0.000000000000732   47-114   PKD domain  
  0.000000000353   584-650   PKD domain  
gi|284040107|ref|YP_003390037.1|   0.000000000288   197-314   PKD domain  
gi|284041212|ref|YP_003391142.1|   0.000072   127-217   PKD domain  
 
Weak hits:
gi|284036492|ref|YP_003386422.1|   0.0719   855-882   PKD domain  
gi|284037518|ref|YP_003387448.1|   0.000353   637-731   PKD domain  
gi|284037546|ref|YP_003387476.1|   0.0314   521-625   PKD domain  
gi|284038663|ref|YP_003388593.1|   0.00106   781-902   PKD domain  
gi|284038724|ref|YP_003388654.1|   0.00357   346-406   PKD domain  
gi|284039238|ref|YP_003389168.1|   0.0017   67-113   PKD domain  
gi|284040319|ref|YP_003390249.1|   0.0994   960-986   PKD domain  
gi|284040821|ref|YP_003390751.1|   0.0471   774-829   PKD domain  

Runella slithyformis DSM 19594 has 18 significant domains in 14 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|338209375|ref|YP_004646346.1|   0.000000000000222   462-553   PKD domain  
gi|338209729|ref|YP_004653776.1|   1.44e-20   476-566   PKD domain  
gi|338210067|ref|YP_004654114.1|   2.35e-17   625-713   PKD domain  
gi|338210376|ref|YP_004654425.1|   0.00000000000000157   567-650   PKD domain  
  0.0000000000275   46-112   PKD domain  
  0.0188   904-967   PKD domain  
  0.0259   728-803   PKD domain  
gi|338210441|ref|YP_004654490.1|   0.0000000000206   1027-1143   PKD domain  
  0.0000000034   758-829   PKD domain  
gi|338211927|ref|YP_004655980.1|   0.000000000000366   476-565   PKD domain  
gi|338212017|ref|YP_004656070.1|   7.32e-19   345-433   PKD domain  
gi|338212341|ref|YP_004656396.1|   0.00000000000000275   472-564   PKD domain  
gi|338213368|ref|YP_004657423.1|   0.00000144   88-188   PKD domain  
gi|338213568|ref|YP_004657623.1|   0.00000569   204-283   PKD domain  
  0.00432   252-352   PKD domain  
gi|338213719|ref|YP_004657774.1|   0.00000000000235   711-804   PKD domain  
gi|338213759|ref|YP_004657814.1|   0.0000000000706   206-277   PKD domain  
  0.000000000111   117-190   PKD domain  
  0.00000111   31-89   PKD domain  
gi|338214435|ref|YP_004658496.1|   0.000000000000392   41-104   PKD domain  
gi|338214579|ref|YP_004658642.1|   2.35e-17   43-130   PKD domain  
 
Weak hits:
gi|338209948|ref|YP_004653995.1|   0.0392   362-416   PKD domain  
gi|338209988|ref|YP_004654035.1|   0.00249   628-699   PKD domain  
gi|338211362|ref|YP_004655415.1|   0.00432   494-554   PKD domain  
gi|338211659|ref|YP_004655712.1|   0.00384   728-819   PKD domain  
gi|338211701|ref|YP_004655754.1|   0.0106   535-598   PKD domain  
  0.0981   599-671   PKD domain  
gi|338213190|ref|YP_004657245.1|   0.0159   415-487   PKD domain  
gi|338213406|ref|YP_004657461.1|   0.000641   76-147   PKD domain  
gi|338214483|ref|YP_004658544.1|   0.0824   579-631   PKD domain  
gi|338214864|ref|YP_004658927.1|   0.019   554-613   PKD domain  

Parabacteroides distasonis ATCC 8503 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|150007467|ref|YP_001302210.1|   0.0000034   258-342   PKD domain  
 
Weak hits:
gi|150010007|ref|YP_001304750.1|   0.00451   597-675   PKD domain  

Paludibacter propionicigenes WB4 has 8 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|313202522|ref|YP_004041179.1|   0.000000000000392   31-105   PKD domain  
gi|313202730|ref|YP_004041387.1|   0.0000667   41-111   PKD domain  
gi|313202918|ref|YP_004041575.1|   2.62e-17   209-331   PKD domain  
  3.01e-16   59-147   PKD domain  
  0.0000000000628   2117-2184   PKD domain  
  0.000000000811   2271-2334   PKD domain  
gi|313202961|ref|YP_004041618.1|   0.0000000000000602   41-116   PKD domain  
gi|313204819|ref|YP_004043476.1|   0.000000000000746   340-405   PKD domain  
 
Weak hits:
gi|313202865|ref|YP_004041522.1|   0.000366   250-330   PKD domain  
gi|313203315|ref|YP_004041972.1|   0.0275   379-430   PKD domain  

Odoribacter splanchnicus DSM 20712 has 15 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|325280686|ref|YP_004253228.1|   0.0000000589   49-110   PKD domain  
gi|325280687|ref|YP_004253229.1|   0.000000259   44-114   PKD domain  
gi|325280820|ref|YP_004253362.1|   6.41e-16   1721-1835   PKD domain  
  0.0000000115   313-404   PKD domain  
  0.0000000126   185-296   PKD domain  
  0.000000602   1532-1616   PKD domain  
  0.00000772   1453-1556   PKD domain  
  0.0000122   1848-1913   PKD domain  
  0.0000275   1144-1209   PKD domain  
  0.0000445   1634-1748   PKD domain  
  0.0294   934-1026   PKD domain  
gi|325281391|ref|YP_004253933.1|   0.0000000412   129-197   PKD domain  
  0.00000942   42-112   PKD domain  
gi|325281709|ref|YP_004254251.1|   0.000017   208-287   PKD domain  
gi|325282204|ref|YP_004254746.1|   0.00000275   40-111   PKD domain  
  0.0000153   142-199   PKD domain  
 
Weak hits:
gi|325278896|ref|YP_004251438.1|   0.000765   41-75   PKD domain  
gi|325279142|ref|YP_004251684.1|   0.0589   58-121   PKD domain  
gi|325279860|ref|YP_004252402.1|   0.0589   53-128   PKD domain  
gi|325280215|ref|YP_004252757.1|   0.0804   68-118   PKD domain  
gi|325280419|ref|YP_004252961.1|   0.051   516-590   PKD domain  
gi|325280676|ref|YP_004253218.1|   0.00667   16-49   PKD domain  
gi|325282221|ref|YP_004254763.1|   0.000183   43-112   PKD domain  
  0.000294   135-201   PKD domain  

Prevotella melaninogenica ATCC 25845 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|302345594|ref|YP_003813947.1|   0.0000562   33-98   PKD domain  
gi|302347006|ref|YP_003815304.1|   0.00000445   1113-1164   PKD domain  
 
Weak hits:
gi|302345199|ref|YP_003813552.1|   0.0151   62-115   PKD domain  
gi|302347007|ref|YP_003815305.1|   0.000235   1117-1154   PKD domain  

Prevotella intermedia 17 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|387132046|ref|YP_006298019.1|   0.00000000222   129-199   PKD domain  
  0.000000275   49-106   PKD domain  
gi|387133617|ref|YP_006299589.1|   0.00000262   31-109   PKD domain  

Prevotella denticola F0289 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|327313341|ref|YP_004328778.1|   0.0000523   61-123   PKD domain  
 
Weak hits:
gi|327312883|ref|YP_004328320.1|   0.0275   283-324   PKD domain  
gi|327314336|ref|YP_004329773.1|   0.0667   31-110   PKD domain  

Porphyromonas asaccharolytica DSM 20707 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|332299442|ref|YP_004441363.1|   0.00000249   227-308   PKD domain  
 
Weak hits:
gi|332299962|ref|YP_004441883.1|   0.0017   239-314   PKD domain  
gi|332300660|ref|YP_004442581.1|   0.00654   323-360   PKD domain  
gi|332300801|ref|YP_004442722.1|   0.000471   1859-1927   PKD domain  

Porphyromonas gingivalis ATCC 33277 has 3 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|188994199|ref|YP_001928451.1|   1.7e-23   438-562   PKD domain  
  4.45e-22   650-734   PKD domain  
  1.05e-17   565-651   PKD domain  
 
Weak hits:
gi|188995181|ref|YP_001929433.1|   0.000353   310-381   PKD domain  

Alistipes finegoldii DSM 17242 has 8 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|390945945|ref|YP_006409705.1|   0.00000000000549   27-116   PKD domain  
  0.0000000144   135-201   PKD domain  
gi|390945946|ref|YP_006409706.1|   4.97e-22   122-206   PKD domain  
  0.00000000017   48-119   PKD domain  
gi|390946213|ref|YP_006409973.1|   0.0000000183   46-112   PKD domain  
  0.0000106   133-175   PKD domain  
gi|390946856|ref|YP_006410616.1|   0.0000112   46-118   PKD domain  
gi|390947461|ref|YP_006411221.1|   0.000000903   155-219   PKD domain  
 
Weak hits:
gi|390946352|ref|YP_006410112.1|   0.00706   739-797   PKD domain  
gi|390946826|ref|YP_006410586.1|   0.00196   404-447   PKD domain  
gi|390947464|ref|YP_006411224.1|   0.00392   49-104   PKD domain  
gi|390947510|ref|YP_006411270.1|   0.0105   206-280   PKD domain  
gi|390947542|ref|YP_006411302.1|   0.0432   27-53   PKD domain  
gi|390947637|ref|YP_006411397.1|   0.000183   43-112   PKD domain  
  0.000294   135-201   PKD domain  

Bacteroides salanitronis DSM 18170 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|325298231|ref|YP_004258148.1|   0.000000000445   35-104   PKD domain  
  0.00000000105   124-187   PKD domain  
 
Weak hits:
gi|325298943|ref|YP_004258860.1|   0.000373   574-650   PKD domain  

Bacteroides helcogenes P 36-108 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|319901524|ref|YP_004161252.1|   0.00000144   56-128   PKD domain  
 
Weak hits:
gi|319900463|ref|YP_004160191.1|   0.00118   251-319   PKD domain  
gi|319900744|ref|YP_004160472.1|   0.000314   69-125   PKD domain  

Bacteroides thetaiotaomicron VPI-5482 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|29345602|ref|NP_809105.1|   0.000000000000222   229-290   PKD domain  
gi|29350134|ref|NP_813637.1|   3.92e-17   30-108   PKD domain  
 
Weak hits:
gi|29346896|ref|NP_810399.1|   0.0981   101-150   PKD domain  
gi|29347366|ref|NP_810869.1|   0.000183   43-112   PKD domain  
  0.000294   135-201   PKD domain  
gi|29348739|ref|NP_812242.1|   0.0196   271-342   PKD domain  
gi|29350069|ref|NP_813572.1|   0.000981   422-450   PKD domain  

Bacteroides fragilis YCH46 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|53713225|ref|YP_099217.1|   0.000000000157   38-101   PKD domain  
  0.000000445   134-182   PKD domain  
gi|53714133|ref|YP_100125.1|   0.0000000445   131-188   PKD domain  
  0.0000602   63-111   PKD domain  
 
Weak hits:
gi|53712859|ref|YP_098851.1|   0.00353   65-118   PKD domain  
gi|53714320|ref|YP_100312.1|   0.000183   43-112   PKD domain  
  0.000294   135-201   PKD domain  
gi|53715658|ref|YP_101650.1|   0.0445   374-403   PKD domain  
gi|53715661|ref|YP_101653.1|   0.0157   729-770   PKD domain  

Pedobacter saltans DSM 12145 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|325103176|ref|YP_004272830.1|   0.0000000000222   63-102   PKD domain  
gi|325104502|ref|YP_004274156.1|   6.54e-18   682-757   PKD domain  
  4.05e-16   583-673   PKD domain  
  0.00000000000235   759-839   PKD domain  
  0.0902   842-941   PKD domain  
gi|325105127|ref|YP_004274781.1|   0.0000706   423-506   PKD domain  
  0.0000824   2396-2466   PKD domain  
gi|325105345|ref|YP_004274999.1|   0.00000955   40-101   PKD domain  
 
Weak hits:
gi|325102777|ref|YP_004272431.1|   0.000262   270-311   PKD domain  
gi|325102818|ref|YP_004272472.1|   0.0144   270-291   PKD domain  
gi|325103264|ref|YP_004272918.1|   0.00122   46-114   PKD domain  
gi|325103427|ref|YP_004273081.1|   0.00706   234-326   PKD domain  
gi|325103459|ref|YP_004273113.1|   0.00275   276-313   PKD domain  
gi|325103833|ref|YP_004273487.1|   0.0798   267-307   PKD domain  
gi|325105125|ref|YP_004274779.1|   0.00212   1198-1267   PKD domain  
gi|325105140|ref|YP_004274794.1|   0.00133   2059-2129   PKD domain  
  0.00667   528-580   PKD domain  
  0.00667   682-734   PKD domain  
  0.0192   760-811   PKD domain  
  0.0279   605-657   PKD domain  
  0.0294   451-503   PKD domain  
  0.0706   841-888   PKD domain  
gi|325105462|ref|YP_004275116.1|   0.0314   13-77   PKD domain  
gi|325105775|ref|YP_004275429.1|   0.000369   709-765   PKD domain  
gi|325106386|ref|YP_004276040.1|   0.00114   419-543   PKD domain  
  0.0798   364-448   PKD domain  
gi|325106496|ref|YP_004276150.1|   0.000687   97-170   PKD domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   176325 176325
No Yes Homo sapiens 76_38 Human 103 41
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 16 8
No Yes Gorilla gorilla 76_3.1 Western gorilla 37 18
No Yes Pongo abelii 76_2 Sumatran orangutan 31 11
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 30 11
No Yes Papio anubis 76 Olive baboon 33 12
No Yes Macaca mulatta 76_1 Rhesus monkey 30 14
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 49 22
No Yes Otolemur garnettii 76_3 Small-eared galago 33 11
No Yes Microcebus murinus 76_1 Gray mouse lemur 26 9
No Yes Rattus norvegicus 76_5.0 Norway rat 32 10
No Yes Mus musculus 76_38 House mouse 55 22
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 22 9
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 28 11
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 32 11
No Yes Cavia porcellus 76_3 Domestic guinea pig 32 11
No Yes Oryctolagus cuniculus 76_2 Rabbit 35 12
No Yes Ochotona princeps 76 American pika 21 8
No Yes Tupaia belangeri 76 Northern tree shrew 19 10
No Yes Sus scrofa 76_10.2 Pig 34 13
No Yes Bos taurus 76_3.1 Cattle 30 11
No Yes Ovis aries 76_3.1 Sheep 36 12
No Yes Vicugna pacos 76_1 Alpaca 12 6
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 29 10
No Yes Mustela putorius furo 76_1.0 Domestic ferret 31 11
No Yes Ailuropoda melanoleuca 76_1 Giant panda 31 10
No Yes Canis familiaris 76_3.1 Dog 40 16
No Yes Felis catus 76_6.2 Domestic cat 29 11
No Yes Equus caballus 76_2 Horse 44 13
No Yes Myotis lucifugus 76_2.0 Little brown bat 24 8
No Yes Pteropus vampyrus 76_1 Large flying fox 25 10
No Yes Sorex araneus 76_1 European shrew 8 5
No Yes Erinaceus europaeus 76 Western European hedgehog 22 8
No Yes Procavia capensis 76_1 Cape rock hyrax 22 9
No Yes Loxodonta africana 76_3 African savanna elephant 35 13
No Yes Echinops telfairi 76 Small Madagascar hedgehog 16 8
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 29 12
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 9 6
No Yes Macropus eugenii 76_1.0 Tammar wallaby 22 8
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 34 15
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 33 11
No Yes Ornithorhynchus anatinus 76_5 Platypus 18 9
No Yes Saccoglossus kowalevskii v3.0   49 12
No Yes Petromyzon marinus 76_7.0 Sea lamprey 14 8
No Yes Meleagris gallopavo 76_2 Turkey 34 13
No Yes Gallus gallus 76_4 Chicken 30 10
No Yes Anas platyrhynchos 76_1.0 Mallard 27 9
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 30 9
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 28 9
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 47 16
No Yes Anolis carolinensis 76_2.0 Green anole 31 10
No Yes Xenopus laevis African clawed frog 19 8
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 38 12
No Yes Latimeria chalumnae 76_1 Coelacanth 44 13
No Yes Lepisosteus oculatus 76 Spotted gar 75 22
No Yes Gadus morhua 76_1 Atlantic cod 31 15
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 60 21
No Yes Takifugu rubripes 76_4 Torafugu 111 40
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 34 17
No Yes Oryzias latipes 76_1 Japanese medaka 29 13
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 34 16
No Yes Poecilia formosa 76 Amazon molly 22 15
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 47 20
No Yes Astyanax mexicanus 76 Mexican tetra 38 19
No Yes Danio rerio 76_9 Zebrafish 56 22
No Yes Oikopleura dioica   2 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 1
No Yes Ciona intestinalis 76 Vase tunicate 13 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 52 14
No Yes Adineta vaga   2 1
No Yes Octopus bimaculoides 280   17 5
No Yes Crassostrea gigas 22 Pacific oyster 31 12
No Yes Lottia gigantea Owl limpet 24 8
No Yes Helobdella robusta   4 1
No Yes Capitella sp. I   19 6
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 1
No Yes Heliconius melpomene Postman butterfly 2 1
No Yes Bombyx mori Domestic silkworm 3 1
No Yes Nasonia vitripennis Jewel wasp 4 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 4 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 4 1
No Yes Linepithema humile v1.1 Argentine ant 2 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 4 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 1
No Yes Atta cephalotes v1.1   3 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 3 1
No Yes Lucilia cuprina Australian sheep blowfly 5 2
No Yes Drosophila grimshawi 1.3   4 1
No Yes Drosophila willistoni 1.3   4 1
No Yes Drosophila pseudoobscura 2.13   4 1
No Yes Drosophila persimilis 1.3   4 1
No Yes Drosophila suzukii   4 1
No Yes Drosophila yakuba 1.3   4 1
No Yes Drosophila simulans 1.3   4 1
No Yes Drosophila sechellia 1.3   5 2
No Yes Drosophila melanogaster 76_5 Fruit fly 4 1
No Yes Drosophila erecta 1.3   4 1
No Yes Drosophila ananassae 1.3   4 1
No Yes Drosophila virilis 1.2   4 1
No Yes Drosophila mojavensis 1.3   5 1
No Yes Megaselia scalaris 22   3 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 4 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 4 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 5 1
No Yes Tribolium castaneum 3.0 Red flour beetle 4 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 4 1
No Yes Acyrthosiphon pisum Pea aphid 4 1
No Yes Rhodnius prolixus 22   4 1
No Yes Daphnia pulex Common water flea 3 1
No Yes Strigamia maritima 22   5 2
No Yes Sarcoptes scabiei   2 1
No Yes Tetranychus urticae Two-spotted spider mite 2 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 7 4
No Yes Onchocerca volvulus 22   2 2
No Yes Echinococcus multilocularis   2 2
No Yes Schistosoma mansoni   2 1
No Yes Mnemiopsis leidyi Sea walnut 6 3
No Yes Acropora digitifera v1.0   61 20
No Yes Nematostella vectensis 1.0 Starlet sea anemone 22 7
No Yes Hydra vulgaris   13 7
No Yes Amphimedon queenslandica   7 6
No Yes Trichoplax adhaerens   5 2
No Yes Proterospongia sp. ATCC 50818   5 5
No Yes Monosiga brevicollis   7 6
No Yes Sphaeroforma arctica JP610   2 1
No Yes Capsaspora owczarzaki ATCC 30864   10 7
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   3 3
No Yes Aspergillus wentii v1.0   1 1
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Porphyridium purpureum 02_2012   6 6
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Cyanophora paradoxa   20 18
No Yes Ectocarpus siliculosus   2 2
No Yes Aureococcus anophagefferens   2 2
No Yes Phytophthora capsici   1 1
No Yes Fragilariopsis cylindrus   14 14
No Yes Naegleria gruberi   1 1
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Acaryochloris marina MBIC11017   2 2
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Rivularia sp. PCC 7116   1 1
No Yes Nostoc sp. PCC 7524   15 6
No Yes Conexibacter woesei DSM 14684   11 11
No Yes Slackia heliotrinireducens DSM 20476   2 2
No Yes Ilumatobacter coccineus   1 1
No Yes Nakamurella multipartita DSM 44233   4 1
No Yes Modestobacter marinus   4 2
No Yes Blastococcus saxobsidens DD2   4 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   2 2
No Yes Catenulispora acidiphila DSM 44928   21 17
No Yes Stackebrandtia nassauensis DSM 44728   4 4
No Yes Frankia symbiont of Datisca glomerata   1 1
No Yes Frankia sp. EAN1pec   7 5
No Yes Frankia alni ACN14a   3 3
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   8 6
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   3 3
No Yes Streptomyces flavogriseus ATCC 33331   3 3
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   5 4
No Yes Streptomyces bingchenggensis BCW-1   2 2
No Yes Streptomyces violaceusniger Tu 4113   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   4 4
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Saccharomonospora viridis DSM 43017   4 4
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   11 6
No Yes Nocardioides sp. JS614   4 2
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Propionibacterium acnes SK137   3 3
No Yes Verrucosispora maris AB-18-032   8 6
No Yes Micromonospora sp. L5   5 5
No Yes Micromonospora aurantiaca ATCC 27029   3 3
No Yes Actinoplanes sp. N902-109   6 4
No Yes Actinoplanes sp. SE50/110   6 5
No Yes Actinoplanes missouriensis 431   12 9
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Tropheryma whipplei TW08/27   1 1
No Yes Beutenbergia cavernae DSM 12333   2 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   6 1
No Yes Jonesia denitrificans DSM 20603   3 3
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Brachybacterium faecium DSM 4810   5 2
No Yes Isoptericola variabilis 225   11 8
No Yes Xylanimonas cellulosilytica DSM 15894   2 2
No Yes Cellulomonas flavigena DSM 20109   9 6
No Yes Cellulomonas fimi ATCC 484   10 6
No Yes [Cellvibrio] gilvus ATCC 13127   4 3
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter arilaitensis Re117   4 2
No Yes Arthrobacter sp. FB24   1 1
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Bifidobacterium bifidum S17   2 2
No Yes Arcanobacterium haemolyticum DSM 20595   3 3
No Yes Mobiluncus curtisii ATCC 43063   1 1
No Yes Actinomyces sp. F0330   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   11 2
No Yes Anaerolinea thermophila UNI-1   3 1
No Yes Sphaerobacter thermophilus DSM 20745   3 2
No Yes Herpetosiphon aurantiacus DSM 785   4 4
No Yes Roseiflexus sp. RS-1   4 2
No Yes Roseiflexus castenholzii DSM 13941   4 2
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   2 2
No Yes Chloroflexus aurantiacus J-10-fl   2 2
No Yes Truepera radiovictrix DSM 17093   15 10
No Yes Deinococcus gobiensis I-0   4 4
No Yes Deinococcus deserti VCD115   4 4
No Yes Deinococcus maricopensis DSM 21211   5 4
No Yes Deinococcus geothermalis DSM 11300   7 5
No Yes Deinococcus proteolyticus MRP   3 3
No Yes Deinococcus radiodurans R1   2 2
No Yes Oceanithermus profundus DSM 14977   6 4
No Yes Marinithermus hydrothermalis DSM 14884   2 2
No Yes Meiothermus silvanus DSM 9946   4 2
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   2 2
No Yes Symbiobacterium thermophilum IAM 14863   2 1
No Yes Clostridium clariflavum DSM 19732   4 4
No Yes Clostridium cellulolyticum H10   7 6
No Yes Clostridium thermocellum ATCC 27405   3 2
No Yes Ruminococcus bromii   2 2
No Yes Thermaerobacter marianensis DSM 12885   1 1
No Yes Oscillibacter valericigenes Sjm18-20   2 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   2 1
No Yes Desulfitobacterium hafniense Y51   3 2
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Acetobacterium woodii DSM 1030   3 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Clostridium lentocellum DSM 5427   6 5
No Yes Coprococcus sp. ART55/1   1 1
No Yes Heliobacterium modesticaldum Ice1   2 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   5 5
No Yes Clostridium perfringens ATCC 13124   2 2
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Thermosediminibacter oceani DSM 16646   4 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   4 2
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   5 3
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Streptococcus macedonicus ACA-DC 198   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus sp. JDR-2   5 3
No Yes Paenibacillus terrae HPL-003   4 3
No Yes Paenibacillus mucilaginosus 3016   4 3
No Yes Paenibacillus polymyxa M1   3 2
No Yes Listeria welshimeri serovar 6b str. SLCC5334   2 2
No Yes Listeria innocua Clip11262   3 3
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   21 9
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   5 4
No Yes Listeria ivanovii subsp. ivanovii PAM 55   2 2
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus weihenstephanensis KBAB4   2 2
No Yes Bacillus thuringiensis str. Al Hakam   2 2
No Yes Bacillus cereus 03BB102   2 2
No Yes Bacillus anthracis str. A0248   3 3
No Yes Bacillus cellulosilyticus DSM 2522   2 2
No Yes Candidatus Cloacamonas acidaminovorans   2 2
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   1 1
No Yes Chloroherpeton thalassium ATCC 35110   9 1
No Yes Haliscomenobacter hydrossis DSM 1100   41 25
No Yes Saprospira grandis str. Lewin   33 14
No Yes Niastella koreensis GR20-10   104 33
No Yes Chitinophaga pinensis DSM 2588   96 28
No Yes Salinibacter ruber M8   13 8
No Yes Rhodothermus marinus DSM 4252   4 2
No Yes Flexibacter litoralis DSM 6794   23 11
No Yes Belliella baltica DSM 15883   3 3
No Yes Cyclobacterium marinum DSM 745   12 10
No Yes Marivirga tractuosa DSM 4126   54 17
No Yes Fibrella aestuarina   15 13
No Yes Leadbetterella byssophila DSM 17132   7 4
No Yes Dyadobacter fermentans DSM 18053   13 11
No Yes Cytophaga hutchinsonii ATCC 33406   58 31
No Yes Spirosoma linguale DSM 74   22 20
No Yes Runella slithyformis DSM 19594   18 14
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Paludibacter propionicigenes WB4   8 5
No Yes Odoribacter splanchnicus DSM 20712   15 6
No Yes Prevotella melaninogenica ATCC 25845   2 2
No Yes Prevotella intermedia 17   3 2
No Yes Prevotella denticola F0289   1 1
No Yes Porphyromonas asaccharolytica DSM 20707   1 1
No Yes Porphyromonas gingivalis ATCC 33277   3 1
No Yes Alistipes finegoldii DSM 17242   8 5
No Yes Bacteroides salanitronis DSM 18170   2 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   2 2
No Yes Bacteroides fragilis YCH46   4 2
No Yes Pedobacter saltans DSM 12145   7 4
No Yes Solitalea canadensis DSM 3403   28 6
No Yes Pedobacter heparinus DSM 2366   34 6
No Yes Sphingobacterium sp. 21   3 3
No Yes Fluviicola taffensis DSM 16823   98 49
No Yes Owenweeksia hongkongensis DSM 17368   98 46
No Yes Zunongwangia profunda SM-A87   4 3
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Gramella forsetii KT0803   8 6
No Yes Lacinutrix sp. 5H-3-7-4   7 6
No Yes Maribacter sp. HTCC2170   16 7
No Yes Robiginitalea biformata HTCC2501   15 7
No Yes Croceibacter atlanticus HTCC2559   3 3
No Yes Aequorivita sublithincola DSM 14238   2 2
No Yes Zobellia galactanivorans   26 13
No Yes Muricauda ruestringensis DSM 13258   24 11
No Yes Cellulophaga algicola DSM 14237   17 11
No Yes Cellulophaga lytica DSM 7489   8 6
No Yes Polaribacter sp. MED152   10 8
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   5 3
No Yes Ornithobacterium rhinotracheale DSM 15997   5 3
No Yes Capnocytophaga canimorsus Cc5   3 1
No Yes Capnocytophaga ochracea DSM 7271   3 1
No Yes Weeksella virosa DSM 16922   1 1
No Yes Flavobacterium indicum GPTSA100-9   5 4
No Yes Flavobacterium psychrophilum JIP02/86   3 2
No Yes Flavobacterium branchiophilum FL-15   3 2
No Yes Flavobacterium columnare ATCC 49512   4 3
No Yes Flavobacterium johnsoniae UW101   26 12
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Isosphaera pallida ATCC 43644   4 4
No Yes Rhodopirellula baltica SH 1   5 2
No Yes Coraliomargarita akajimensis DSM 45221   6 4
No Yes Opitutus terrae PB90-1   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Sphaerochaeta pleomorpha str. Grapes   2 2
No Yes Spirochaeta africana DSM 8902   4 4
No Yes Desulfurispirillum indicum S5   5 2
No Yes Fervidobacterium nodosum Rt17-B1   1 1
No Yes Thermosipho melanesiensis BI429   1 1
No Yes Thermosipho africanus TCF52B   1 1
No Yes Thermovibrio ammonificans HB-1   3 1
No Yes Persephonella marina EX-H1   6 2
No Yes Caldisericum exile AZM16c01   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   2 1
No Yes Candidatus Solibacter usitatus Ellin6076   11 6
No Yes Granulicella tundricola MP5ACTX9   7 3
No Yes Granulicella mallensis MP5ACTX8   3 3
No Yes Candidatus Koribacter versatilis Ellin345   2 2
No Yes Terriglobus saanensis SP1PR4   4 3
No Yes Terriglobus roseus DSM 18391   2 2
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes candidate division SR1 bacterium RAAC1_SR1_1   8 4
No Yes Candidatus Saccharimonas aalborgensis   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 53993   1 1
No Yes Bacteriovorax marinus SJ   5 2
No Yes Bdellovibrio bacteriovorus HD100   2 1
No Yes Nitratifractor salsuginis DSM 16511   2 2
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Syntrophus aciditrophicus SB   6 2
No Yes Desulfomonile tiedjei DSM 6799   2 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   5 3
No Yes Desulfatibacillum alkenivorans AK-01   16 4
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Desulfomicrobium baculatum DSM 4028   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   7 3
No Yes Geobacter daltonii FRC-32   3 3
No Yes Geobacter sp. M21   14 3
No Yes Geobacter uraniireducens Rf4   12 4
No Yes Geobacter lovleyi SZ   1 1
No Yes Geobacter bemidjiensis Bem   12 1
No Yes Geobacter sulfurreducens KN400   3 3
No Yes Geobacter metallireducens GS-15   2 2
No Yes Babela massiliensis   5 2
No Yes Haliangium ochraceum DSM 14365   4 4
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   3 2
No Yes Anaeromyxobacter dehalogenans 2CP-1   6 4
No Yes Stigmatella aurantiaca DW4/3-1   24 21
No Yes Corallococcus coralloides DSM 2259   21 17
No Yes Myxococcus xanthus DK 1622   8 7
No Yes Myxococcus fulvus HW-1   4 4
No Yes Methylibium petroleiphilum PM1   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   3 2
No Yes Ralstonia pickettii 12D   1 1
No Yes Burkholderia ambifaria AMMD   3 2
No Yes Burkholderia gladioli BSR3   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Dinoroseobacter shibae DFL 12   2 2
No Yes Ruegeria pomeroyi DSS-3   13 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodospirillum photometricum DSM 122   4 1
No Yes Polymorphum gilvum SL003B-26A1   15 1
No Yes Candidatus Puniceispirillum marinum IMCC1322   1 1
No Yes Saccharophagus degradans 2-40   9 6
No Yes Teredinibacter turnerae T7901   14 7
No Yes Cellvibrio japonicus Ueda107   9 6
No Yes Aeromonas salmonicida subsp. salmonicida A449   2 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 2
No Yes Vibrio fischeri MJ11   2 1
No Yes Vibrio sp. Ex25   3 3
No Yes Vibrio harveyi ATCC BAA-1116   2 2
No Yes Vibrio parahaemolyticus RIMD 2210633   3 3
No Yes Vibrio splendidus LGP32   3 2
No Yes Vibrio anguillarum 775   5 3
No Yes Vibrio furnissii NCTC 11218   3 2
No Yes Vibrio vulnificus MO6-24/O   3 2
No Yes Vibrio cholerae O395   4 2
No Yes Photobacterium profundum SS9   1 1
No Yes Psychromonas ingrahamii 37   2 1
No Yes Idiomarina loihiensis L2TR   1 1
No Yes Ferrimonas balearica DSM 9799   2 2
No Yes Shewanella piezotolerans WP3   14 7
No Yes Shewanella loihica PV-4   4 3
No Yes Shewanella halifaxensis HAW-EB4   3 2
No Yes Shewanella sediminis HAW-EB3   7 4
No Yes Shewanella denitrificans OS217   9 6
No Yes Shewanella pealeana ATCC 700345   2 1
No Yes Shewanella oneidensis MR-1   5 3
No Yes Shewanella baltica OS185   5 4
No Yes Shewanella woodyi ATCC 51908   16 11
No Yes Shewanella sp. MR-4   5 3
No Yes Shewanella amazonensis SB2B   8 7
No Yes Shewanella violacea DSS12   17 11
No Yes Shewanella frigidimarina NCIMB 400   3 2
No Yes Shewanella putrefaciens CN-32   4 3
No Yes Colwellia psychrerythraea 34H   4 4
No Yes Pseudoalteromonas sp. SM9913   2 2
No Yes Pseudoalteromonas atlantica T6c   4 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   3 1
No Yes Glaciecola nitratireducens FR1064   4 1
No Yes Alteromonas sp. SN2   2 2
No Yes Alteromonas macleodii str. 'Deep ecotype'   9 3
No Yes Kangiella koreensis DSM 16069   6 4
No Yes Hahella chejuensis KCTC 2396   7 6
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Methylomicrobium alcaliphilum   2 1
No Yes Methylomonas methanica MC09   5 3
No Yes Methylococcus capsulatus str. Bath   5 4
No Yes Rhodanobacter denitrificans   1 1
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Halothiobacillus neapolitanus c2   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Rahnella sp. Y9602   4 3
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   3 3
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Enterobacter asburiae LF7a   2 2
No Yes Enterobacter cloacae subsp. dissolvens SDM   2 2
No Yes Citrobacter koseri ATCC BAA-895   2 2
No Yes Nanoarchaeum equitans Kin4-M   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   9 4
No Yes Acidilobus saccharovorans 345-15   1 1
No Yes Aeropyrum pernix K1   2 1
No Yes Desulfurococcus fermentans DSM 16532   1 1
No Yes Desulfurococcus mucosus DSM 2162   1 1
No Yes Metallosphaera cuprina Ar-4   1 1
No Yes Metallosphaera sedula DSM 5348   3 2
No Yes Acidianus hospitalis W1   1 1
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Sulfolobus acidocaldarius DSM 639   3 2
No Yes halophilic archaeon DL31   2 2
No Yes Methanocella arvoryzae MRE50   4 3
No Yes Methanocella conradii HZ254   17 3
No Yes Methanocella paludicola SANAE   3 2
No Yes Methanosaeta harundinacea 6Ac   8 4
No Yes Methanosaeta concilii GP6   1 1
No Yes Methanosalsum zhilinae DSM 4017   9 6
No Yes Methanohalobium evestigatum Z-7303   3 2
No Yes Methanococcoides burtonii DSM 6242   6 3
No Yes Methanosarcina acetivorans C2A   232 58
No Yes Methanosarcina mazei Go1   69 25
No Yes Methanosarcina barkeri str. Fusaro   244 60
No Yes Methanohalophilus mahii DSM 5219   7 6
No Yes Methanosphaerula palustris E1-9c   150 34
No Yes Methanoregula boonei 6A8   48 11
No Yes Methanospirillum hungatei JF-1   150 40
No Yes Methanocorpusculum labreanum Z   4 3
No Yes Methanoplanus petrolearius DSM 11571   43 13
No Yes Methanoculleus bourgensis MS2   19 10
No Yes Methanoculleus marisnigri JR1   10 4
No Yes Ferroglobus placidus DSM 10642   2 2
No Yes Archaeoglobus profundus DSM 5631   1 1
No Yes Archaeoglobus veneficus SNP6   2 2
No Yes Archaeoglobus fulgidus DSM 4304   3 2
No Yes Thermococcus sp. 4557   3 1
No Yes Thermococcus gammatolerans EJ3   2 1
No Yes Thermococcus barophilus MP   3 1
No Yes Pyrococcus sp. ST04   2 1
No Yes Pyrococcus horikoshii OT3   2 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasmatales archaeon BRNA1   3 3
No Yes Salinarchaeum sp. Harcht-Bsk1   26 11
No Yes Halopiger xanaduensis SH-6   2 1
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Natrinema sp. J7-2   6 6
No Yes Natrialba magadii ATCC 43099   2 2
No Yes Halorubrum lacusprofundi ATCC 49239   6 1
No Yes Halogeometricum borinquense DSM 11551   9 9
No Yes Haloferax mediterranei ATCC 33500   7 6
No Yes Haloferax volcanii DS2   1 1
No Yes Halomicrobium mukohataei DSM 12286   16 10
No Yes Halorhabdus utahensis DSM 12940   15 10
No Yes Natronomonas pharaonis DSM 2160   4 3
No Yes Haloarcula hispanica ATCC 33960   4 4
No Yes Haloarcula marismortui ATCC 43049   3 3
No Yes Halobacterium salinarum R1   4 4
No Yes Halobacterium sp. NRC-1   4 4
No Yes Methanotorris igneus Kol 5   5 3
No Yes Methanocaldococcus sp. FS406-22   6 1
No Yes Methanocaldococcus fervens AG86   7 2
No Yes Methanocaldococcus vulcanius M7   6 1
No Yes methanocaldococcus infernus ME   6 2
No Yes Methanocaldococcus jannaschii DSM 2661   5 1
No Yes Methanothermococcus okinawensis IH1   10 4
No Yes Methanococcus aeolicus Nankai-3   2 2
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   1 1
No Yes Methanothermobacter marburgensis str. Marburg   4 4
No Yes Methanothermobacter thermautotrophicus str. Delta H   5 4
No Yes Aciduliprofundum sp. MAR08-339   2 2
No Yes Aciduliprofundum boonei T469   5 3
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 28 11
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 8 2
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 5 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Cyanothece sp. PCC 7822   13 2
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Stanieria cyanosphaera PCC 7437   14 1
No Yes Anabaena cylindrica PCC 7122   7 2
No Yes Frankia sp. EuI1c   22 11
No Yes Frankia sp. CcI3   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   7 7
No Yes Streptomyces fulvissimus DSM 40593   5 4
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   2 2
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   6 6
No Yes Propionibacterium avidum 44067   1 1
No Yes Propionibacterium acnes ATCC 11828   2 2
No Yes Propionibacterium acnes TypeIA2 P.acn31   2 2
No Yes Propionibacterium acnes TypeIA2 P.acn17   3 3
No Yes Propionibacterium acnes TypeIA2 P.acn33   3 3
No Yes Propionibacterium acnes C1   3 3
No Yes Propionibacterium acnes 6609   1 1
No Yes Propionibacterium acnes 266   3 3
No Yes Propionibacterium acnes KPA171202   3 3
No Yes Propionibacterium acidipropionici ATCC 4875   6 3
No Yes Actinoplanes friuliensis DSM 7358   13 12
No Yes Mycobacterium sp. KMS   1 1
No Yes Mycobacterium sp. MCS   1 1
No Yes Tropheryma whipplei str. Twist   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   4 2
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium breve UCC2003   1 1
No Yes Bifidobacterium bifidum PRL2010   2 2
No Yes Bifidobacterium bifidum BGN4   2 2
No Yes Chthonomonas calidirosea T49   1 1
No Yes Deinococcus peraridilitoris DSM 19664   6 6
No Yes Thermus thermophilus JL-18   1 1
No Yes Clostridium thermocellum DSM 1313   3 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   3 3
No Yes Desulfotomaculum gibsoniae DSM 7213   2 2
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium perfringens SM101   2 2
No Yes Clostridium perfringens str. 13   2 2
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Thermacetogenium phaeum DSM 12270   3 2
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis IO-1   1 1
No Yes Lactococcus lactis subsp. lactis CV56   1 1
No Yes Lactococcus lactis subsp. lactis KF147   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Thermobacillus composti KWC4   3 2
No Yes Paenibacillus sp. Y412MC10   3 3
No Yes Paenibacillus mucilaginosus KNP414   4 3
No Yes Paenibacillus mucilaginosus K02   4 3
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   4 3
No Yes Paenibacillus polymyxa SC2   3 2
No Yes Paenibacillus polymyxa E681   3 2
No Yes Listeria monocytogenes EGD sequence   5 4
No Yes Listeria monocytogenes N53-1   6 6
No Yes Listeria monocytogenes La111   5 5
No Yes Listeria monocytogenes serotype 4b str. LL195   4 3
No Yes Listeria monocytogenes 07PF0776   5 4
No Yes Listeria monocytogenes M7   6 5
No Yes Listeria monocytogenes J1-220   4 3
No Yes Listeria monocytogenes J1816   4 3
No Yes Listeria monocytogenes SLCC2376   7 6
No Yes Listeria monocytogenes SLCC5850   5 4
No Yes Listeria monocytogenes ATCC 19117   4 3
No Yes Listeria monocytogenes L312   5 4
No Yes Listeria monocytogenes SLCC2479   6 5
No Yes Listeria monocytogenes SLCC7179   8 6
No Yes Listeria monocytogenes SLCC2540   4 3
No Yes Listeria monocytogenes SLCC2378   4 3
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   4 3
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   7 6
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   4 3
No Yes Listeria monocytogenes 08-5578   5 4
No Yes Listeria monocytogenes 08-5923   5 4
No Yes Listeria monocytogenes L99   6 5
No Yes Listeria monocytogenes HCC23   6 5
No Yes Listeria monocytogenes 10403S   5 4
No Yes Listeria monocytogenes J0161   6 5
No Yes Listeria monocytogenes Finland 1998   5 4
No Yes Listeria monocytogenes FSL R2-561   6 5
No Yes Listeria monocytogenes serotype 4b str. F2365   4 3
No Yes Listeria monocytogenes EGD-e   6 5
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   2 2
No Yes Bacillus thuringiensis HD-771   2 2
No Yes Bacillus thuringiensis HD-789   2 2
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   2 2
No Yes Bacillus thuringiensis YBT-1518   3 3
No Yes Bacillus thuringiensis Bt407   3 3
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   2 2
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   3 3
No Yes Bacillus thuringiensis BMB171   3 3
No Yes Bacillus thuringiensis serovar finitimus YBT-020   2 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   4 4
No Yes Bacillus cereus FRI-35   2 2
No Yes Bacillus cereus biovar anthracis str. CI   2 2
No Yes Bacillus cereus AH820   2 2
No Yes Bacillus cereus AH187   2 2
No Yes Bacillus cereus B4264   2 2
No Yes Bacillus cereus G9842   2 2
No Yes Bacillus cereus Q1   2 2
No Yes Bacillus cereus F837/76   2 2
No Yes Bacillus cereus NC7401   2 2
No Yes Bacillus cereus E33L   3 3
No Yes Bacillus cereus ATCC 14579   4 4
No Yes Bacillus cereus ATCC 10987   2 2
No Yes Bacillus anthracis str. H9401   3 3
No Yes Bacillus anthracis str. CDC 684   3 3
No Yes Bacillus anthracis str. 'Ames Ancestor'   3 3
No Yes Bacillus anthracis str. Sterne   3 3
No Yes Bacillus anthracis str. Ames   3 3
No Yes Salinibacter ruber DSM 13855   9 7
No Yes Rhodothermus marinus SG0.5JP17-172   5 3
No Yes Echinicola vietnamensis DSM 17526   9 3
No Yes Emticicia oligotrophica DSM 17448   10 8
No Yes Prevotella sp. oral taxon 299 str. F0039   1 1
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Porphyromonas gingivalis TDC60   3 1
No Yes Porphyromonas gingivalis W83   3 1
No Yes Alistipes shahii WAL 8301   6 4
No Yes Bacteroides xylanisolvens XB1A   10 8
No Yes Bacteroides fragilis 638R   3 2
No Yes Bacteroides fragilis NCTC 9343   2 1
No Yes Nonlabens dokdonensis DSW-6   16 12
No Yes Psychroflexus torquis ATCC 700755   4 4
No Yes Riemerella anatipestifer RA-CH-2   6 4
No Yes Riemerella anatipestifer RA-CH-1   6 4
No Yes Riemerella anatipestifer RA-GD   3 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   5 3
No Yes Singulisphaera acidiphila DSM 18658   20 5
No Yes Treponema pedis str. T A4   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Bdellovibrio exovorus JSS   2 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   3 2
No Yes Geobacter sp. M18   4 4
No Yes Geobacter sulfurreducens PCA   3 3
No Yes Sorangium cellulosum So0157-2   3 3
No Yes Anaeromyxobacter sp. K   6 4
No Yes Anaeromyxobacter dehalogenans 2CP-C   4 2
No Yes Myxococcus stipitatus DSM 14675   12 11
No Yes Ralstonia pickettii 12J   1 1
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Variovorax paradoxus B4   2 2
No Yes Variovorax paradoxus EPS   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   6 5
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Vibrio fischeri ES114   2 1
No Yes Vibrio sp. EJY3   4 4
No Yes Vibrio parahaemolyticus BB22OP   3 3
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   3 3
No Yes Vibrio anguillarum Listonella anguillarum M3   5 3
No Yes Vibrio nigripulchritudo VibrioScope   9 8
No Yes Vibrio vulnificus CMCP6   2 2
No Yes Vibrio vulnificus YJ016   5 3
No Yes Vibrio cholerae LMA3984-4   4 2
No Yes Vibrio cholerae M66-2   4 2
No Yes Vibrio cholerae O395   4 2
No Yes Vibrio cholerae IEC224   4 2
No Yes Vibrio cholerae O1 str. 2010EL-1786   4 2
No Yes Vibrio cholerae MJ-1236   4 2
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   4 2
No Yes Idiomarina loihiensis GSL 199   1 1
No Yes Shewanella sp. W3-18-1   4 3
No Yes Shewanella sp. ANA-3   6 5
No Yes Shewanella baltica BA175   6 5
No Yes Shewanella baltica OS678   5 4
No Yes Shewanella baltica OS117   6 5
No Yes Shewanella baltica OS223   4 3
No Yes Shewanella baltica OS195   5 4
No Yes Shewanella baltica OS155   6 5
No Yes Shewanella sp. MR-7   5 3
No Yes Shewanella putrefaciens 200   3 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   8 4
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   4 2
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   4 2
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   4 2
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   1 1
No Yes Alteromonas macleodii AltDE1   8 4
No Yes Alteromonas macleodii str. 'English Channel 673'   2 2
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   2 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   2 2
No Yes Alteromonas macleodii ATCC 27126   2 2
No Yes Alcanivorax dieselolei B5   10 2
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   1 1
No Yes Thioflavicoccus mobilis 8321   8 4
No Yes Rahnella aquatilis HX2   4 3
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   2 2
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Caldisphaera lagunensis DSM 15908   6 6
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   1 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   2 1
No Yes Sulfolobus acidocaldarius Ron12/I   3 2
No Yes Sulfolobus acidocaldarius N8   3 2
No Yes Methanomethylovorans hollandica DSM 15978   32 12
No Yes Methanolobus psychrophilus R15   24 10
No Yes Methanosarcina mazei Tuc01   61 20
No Yes Methanoregula formicica Methanoregula formicicum SMSP   51 11
No Yes Archaeoglobus sulfaticallidus PM70-1   6 4
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus litoralis DSM 5473   3 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   6 6
No Yes Halovivax ruber XH-70   6 6
No Yes Natrinema pellirubrum DSM 15624   2 2
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Haloquadratum walsbyi C23   2 1
No Yes Halorhabdus tiamatea SARL4B   9 5
No Yes Natronomonas moolapensis 8.8.11   9 5
No Yes Haloarcula hispanica N601   4 4
No Yes Methanococcus maripaludis X1   1 1
No Yes Methanobacterium sp. SWAN-1   5 4
No Yes Homo sapiens 75_37 (old version GRC) Human 112 49
No Yes Homo sapiens (NCBI version) Human 78 26
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 34 12
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   2 2
No Yes Homo sapiens 69_37 Human 35 13
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 16 8
No Yes Gorilla gorilla 69_3.1 Western gorilla 30 12
No Yes Pongo abelii 69_2 Sumatran orangutan 31 11
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 29 10
No Yes Macaca mulatta 69_1 Rhesus monkey 26 11
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 30 9
No Yes Otolemur garnettii 69_3 Small-eared galago 33 11
No Yes Microcebus murinus 69_1 Gray mouse lemur 26 9
No Yes Rattus norvegicus 69_3.4 Norway rat 31 10
No Yes Mus musculus 69_38 House mouse 34 12
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 22 9
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 28 11
No Yes Cavia porcellus 69_3 Domestic guinea pig 32 11
No Yes Oryctolagus cuniculus 69_2 Rabbit 24 11
No Yes Ochotona princeps 69 American pika 21 8
No Yes Tupaia belangeri 69 Northern tree shrew 19 10
No Yes Sus scrofa 69_10.2 Pig 24 8
No Yes Bos taurus 69_3.1 Cattle 29 10
No Yes Vicugna pacos 69_1 Alpaca 12 6
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 29 10
No Yes Mustela putorius furo 69_1.0 Domestic ferret 31 11
No Yes Ailuropoda melanoleuca 69_1 Giant panda 31 10
No Yes Canis familiaris 69_3.1 Dog 30 11
No Yes Felis catus 69 Domestic cat 21 9
No Yes Equus caballus 69_2 Horse 31 11
No Yes Myotis lucifugus 69_2.0 Little brown bat 23 7
No Yes Pteropus vampyrus 69_1 Large flying fox 25 10
No Yes Sorex araneus 69_1 European shrew 8 5
No Yes Erinaceus europaeus 69 Western European hedgehog 22 8
No Yes Procavia capensis 69_1 Cape rock hyrax 22 9
No Yes Loxodonta africana 69_3 African savanna elephant 29 10
No Yes Echinops telfairi 69 Small Madagascar hedgehog 16 8
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 10 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 9 6
No Yes Macropus eugenii 69_1.0 Tammar wallaby 22 8
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 28 10
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 29 10
No Yes Ornithorhynchus anatinus 69_5 Platypus 18 9
No Yes Petromyzon marinus 69_7.0 Sea lamprey 10 5
No Yes Meleagris gallopavo 69_2 Turkey 31 11
No Yes Gallus gallus 69_2 Chicken 31 10
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 30 9
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 40 11
No Yes Anolis carolinensis 69_2.0 Green anole 31 10
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 34 9
No Yes Latimeria chalumnae 69_1 Coelacanth 43 12
No Yes Gadus morhua 69_1 Atlantic cod 29 14
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 36 15
No Yes Takifugu rubripes 69_4 Torafugu 37 15
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 28 13
No Yes Oryzias latipes 69_1 Japanese medaka 28 12
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 34 16
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 40 15
No Yes Danio rerio 69_9 Zebrafish 38 16
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 1
No Yes Ciona intestinalis 69 Vase tunicate 13 2
No Yes Drosophila melanogaster 69_5 Fruit fly 4 1
No Yes 1_050719N (meta-genome)   5 4
No Yes 1_Upper_euphotic (meta-genome)   5 4
No Yes 2_050719S (meta-genome)   10 7
No Yes 2_Base_of_chrolophyll_max (meta-genome)   5 5
No Yes 3_050719R (meta-genome)   15 15
No Yes 3_Below_base_of_euphotic (meta-genome)   3 3
No Yes 4_050719Q (meta-genome)   51 35
No Yes 4_Deep_abyss (meta-genome)   11 7
No Yes 5_050719P (meta-genome)   34 30
No Yes 5_Below_upper_mesopelagic (meta-genome)   8 7
No Yes 6_Upper_euphotic (meta-genome)   7 6
No Yes 7_Oxygen_minimum_layer (meta-genome)   15 13
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   3 3
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   5 5
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   7 6
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   3 3
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   3 3
No Yes Bath Hot Springs, planktonic community (meta-genome)   16 14
No Yes Combined (meta-genome)   39 33
No Yes Crater Hills (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   15 14
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   141 127
No Yes Dump top (Dump top) (meta-genome)   97 81
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   85 58
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   135 73
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   17 15
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   54 41
No Yes Fungus garden combined (combined) (meta-genome)   13 13
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   12 12
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   19 18
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   33 20
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   16 12
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   19 13
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   33 20
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   26 23
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   30 26
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   38 29
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   30 22
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   33 26
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   33 21
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   21 16
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   11 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   8 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   8 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   14 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   6 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   56 43
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   50 34
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   23 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   38 32
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   4 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   55 36
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   2 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   26 24
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   73 50
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   42 29
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   17 16
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   21 10
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   28 28
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   47 43
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   50 19
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   276 220
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   112 80
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   12 12
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   69 60
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   62 49
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   22 20
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   59 53
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   25 25
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   83460 51834
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   138 107
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   15 11
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   80 56
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   72 50
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   50 36
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   1 1
No Yes Single-cell genome from subgingival tooth surface TM7c (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   37 20
No Yes Sludge/US, Jazz Assembly (meta-genome)   47 22
No Yes Sludge/US, Phrap Assembly (meta-genome)   67 28
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   234 157
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   234 202
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   189 169
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   101 93
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   96 89
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   112 106
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   130 113
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   65 42
No Yes STRING v9.0.5 (STRING)   2950 1269
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   26 25
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   125 112
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   27 26
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   67501 36235
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   3 3
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   254 143
No Yes Global Ocean Sampling Expedition (GOS)   2871 2141
No Yes NCBI plasmid sequences (Plasmids)   102 50
No Yes NCBI viral sequences (Viral)   6 6
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   41 41
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   70 70
No Yes TargetDB (Targets)   431 139
No Yes The Salmonella enterica Pan-genome (meta-genome)   29 29
No Yes UniProt viral sequences (Viral)   6 6

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