Select to display Genome Domains Proteins No ALL 829818 829818 No Homo sapiens 76_38 Human 2079 350 No Pan troglodytes 76_2.1.4 Chimpanzee 756 107 No Gorilla gorilla 76_3.1 Western gorilla 952 132 No Pongo abelii 76_2 Sumatran orangutan 528 79 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 613 87 No Papio anubis 76 Olive baboon 617 86 No Macaca mulatta 76_1 Rhesus monkey 918 149 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1188 171 No Otolemur garnettii 76_3 Small-eared galago 607 86 No Microcebus murinus 76_1 Gray mouse lemur 448 68 No Rattus norvegicus 76_5.0 Norway rat 840 125 No Mus musculus 76_38 House mouse 1275 186 No Dipodomys ordii 76_1 Ord's kangaroo rat 418 67 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 611 97 No Heterocephalus glaber v1.7-2 Naked mole-rat 634 84 No Cavia porcellus 76_3 Domestic guinea pig 553 80 No Oryctolagus cuniculus 76_2 Rabbit 651 81 No Ochotona princeps 76 American pika 440 70 No Tupaia belangeri 76 Northern tree shrew 409 62 No Sus scrofa 76_10.2 Pig 631 103 No Bos taurus 76_3.1 Cattle 685 100 No Ovis aries 76_3.1 Sheep 701 94 No Vicugna pacos 76_1 Alpaca 348 60 No Tursiops truncatus 76_1 Bottlenose dolphin 508 74 No Mustela putorius furo 76_1.0 Domestic ferret 548 72 No Ailuropoda melanoleuca 76_1 Giant panda 742 99 No Canis familiaris 76_3.1 Dog 684 96 No Felis catus 76_6.2 Domestic cat 629 87 No Equus caballus 76_2 Horse 789 101 No Myotis lucifugus 76_2.0 Little brown bat 633 85 No Pteropus vampyrus 76_1 Large flying fox 523 77 No Sorex araneus 76_1 European shrew 374 62 No Erinaceus europaeus 76 Western European hedgehog 428 68 No Procavia capensis 76_1 Cape rock hyrax 483 75 No Loxodonta africana 76_3 African savanna elephant 699 105 No Echinops telfairi 76 Small Madagascar hedgehog 402 65 No Dasypus novemcinctus 76_2 Nine-banded armadillo 668 96 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 297 54 No Macropus eugenii 76_1.0 Tammar wallaby 418 70 No Sarcophilus harrisii 76_7.0 Tasmanian devil 666 92 No Monodelphis domestica 76_5 Gray short-tailed opossum 598 83 No Ornithorhynchus anatinus 76_5 Platypus 541 117 No Saccoglossus kowalevskii v3.0 997 82 No Petromyzon marinus 76_7.0 Sea lamprey 209 40 No Meleagris gallopavo 76_2 Turkey 659 86 No Gallus gallus 76_4 Chicken 577 70 No Anas platyrhynchos 76_1.0 Mallard 539 72 No Taeniopygia guttata 76_3.2.4 Zebra finch 505 67 No Ficedula albicollis 76_1.0 Collared flycatcher 647 88 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 667 89 No Anolis carolinensis 76_2.0 Green anole 888 131 No Xenopus laevis African clawed frog 370 77 No Xenopus tropicalis 76_4.2 Tropical clawed frog 666 96 No Latimeria chalumnae 76_1 Coelacanth 708 96 No Lepisosteus oculatus 76 Spotted gar 1016 112 No Gadus morhua 76_1 Atlantic cod 851 123 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 995 148 No Takifugu rubripes 76_4 Torafugu 3757 475 No Gasterosteus aculeatus 76_1 Three-spined stickleback 867 110 No Oryzias latipes 76_1 Japanese medaka 842 114 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 734 107 No Poecilia formosa 76 Amazon molly 966 108 No Oreochromis niloticus 76_1.0 Nile tilapia 1072 138 No Astyanax mexicanus 76 Mexican tetra 989 138 No Danio rerio 76_9 Zebrafish 1727 254 No Oikopleura dioica 82 22 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 372 32 No Ciona intestinalis 76 Vase tunicate 136 21 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 264 41 No Adineta vaga 154 36 No Octopus bimaculoides 280 1159 238 No Crassostrea gigas 22 Pacific oyster 729 99 No Lottia gigantea Owl limpet 633 85 No Helobdella robusta 343 95 No Capitella sp. I 546 75 No Danaus plexippus OGS1.0 Monarch butterfly 205 22 No Heliconius melpomene Postman butterfly 176 26 No Bombyx mori Domestic silkworm 181 48 No Nasonia vitripennis Jewel wasp 137 13 No Apis mellifera 38.2d (Not maintained) Honey bee 700 68 No Harpegnathos saltator v3.3 Jerdon's jumping ant 202 23 No Linepithema humile v1.1 Argentine ant 198 33 No Pogonomyrmex barbatus v1.2 Red harvester ant 198 41 No Solenopsis invicta v.2.2.3 Red fire ant 149 38 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 199 24 No Atta cephalotes v1.1 215 42 No Camponotus floridanus v3.3 Florida carpenter ant 199 21 No Lucilia cuprina Australian sheep blowfly 200 22 No Drosophila grimshawi 1.3 224 24 No Drosophila willistoni 1.3 202 19 No Drosophila pseudoobscura 2.13 198 18 No Drosophila persimilis 1.3 194 25 No Drosophila suzukii 211 21 No Drosophila yakuba 1.3 208 19 No Drosophila simulans 1.3 161 20 No Drosophila sechellia 1.3 201 27 No Drosophila melanogaster 76_5 Fruit fly 573 51 No Drosophila erecta 1.3 202 20 No Drosophila ananassae 1.3 209 22 No Drosophila virilis 1.2 215 18 No Drosophila mojavensis 1.3 201 21 No Megaselia scalaris 22 79 26 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 176 25 No Culex pipiens quinquefasciatus Southern house mosquito 206 33 No Anopheles darlingi 22 American malaria mosquito 129 20 No Anopheles gambiae 49_3j African malaria mosquito 297 42 No Tribolium castaneum 3.0 Red flour beetle 212 24 No Pediculus humanus corporis Human body louse 201 18 No Acyrthosiphon pisum Pea aphid 127 16 No Rhodnius prolixus 22 191 28 No Daphnia pulex Common water flea 238 24 No Strigamia maritima 22 217 27 No Sarcoptes scabiei 132 18 No Tetranychus urticae Two-spotted spider mite 172 18 No Ixodes scapularis Black-legged tick 178 21 No Pristionchus pacificus 96 21 No Meloidogyne incognita Southern root-knot nematode 15 9 No Meloidogyne hapla 23 11 No Onchocerca volvulus 22 127 17 No Brugia malayi WS250 Agent of lymphatic filariasis 121 21 No Caenorhabditis japonica 129 24 No Caenorhabditis brenneri 169 24 No Caenorhabditis remanei 151 23 No Caenorhabditis elegans 76_235 Roundworm 231 31 No Caenorhabditis briggsae 2 142 21 No Trichinella spiralis 22 162 20 No Hymenolepis microstoma 248 42 No Echinococcus multilocularis 252 41 No Echinococcus granulosus 250 40 No Taenia solium Pork tapeworm 214 53 No Schistosoma mansoni 228 61 No Mnemiopsis leidyi Sea walnut 43 8 No Acropora digitifera v1.0 301 51 No Nematostella vectensis 1.0 Starlet sea anemone 487 65 No Hydra vulgaris 207 18 No Amphimedon queenslandica 386 24 No Trichoplax adhaerens 100 16 No Proterospongia sp. ATCC 50818 333 30 No Monosiga brevicollis 269 19 No Capsaspora owczarzaki ATCC 30864 13 3 No Mortierella verticillata NRRL 6337 4 2 No Malassezia globosa CBS 7966 8 4 No Sporisorium reilianum 22 5 2 No Ustilago maydis 5 2 No Mixia osmundae IAM 14324 v1.0 2 1 No Cronartium quercuum f. sp. fusiforme G11 v1.0 4 2 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 3 1 No Melampsora laricis-populina 4 1 No Rhodotorula graminis WP1 v1.0 3 1 No Microbotryum violaceum 22 3 1 No Wallemia sebi v1.0 1 1 No Sphaerobolus stellatus v1.0 2 2 No Piloderma croceum F 1598 v1.0 2 1 No Serpula lacrymans var. lacrymans S7.9 2 1 No Coniophora puteana 3 2 No Hydnomerulius pinastri v2.0 4 2 No Paxillus rubicundulus Ve08.2h10 v1.0 4 2 No Pisolithus microcarpus 441 v1.0 3 2 No Pisolithus tinctorius Marx 270 v1.0 3 2 No Scleroderma citrinum Foug A v1.0 3 2 No Coprinopsis cinerea okayama7 130 v3 3 2 No Pleurotus ostreatus Oyster mushroom 3 2 No Amanita thiersii Skay4041 v1.0 3 2 No Amanita muscaria Koide v1.0 Fly agaric 4 2 No Galerina marginata v1.0 3 1 No Hebeloma cylindrosporum h7 v2.0 3 2 No Laccaria bicolor S238N-H82 3 2 No Agaricus bisporus var. bisporus 3 2 No Schizophyllum commune 2 1 No Stereum hirsutum FP-91666 SS1 v1.0 2 1 No Heterobasidion annosum 2 1 No Gloeophyllum trabeum v1.0 3 2 No Punctularia strigosozonata v1.0 4 2 No Sebacina vermifera MAFF 305830 v1.0 1 1 No Fomitiporia mediterranea v1.0 1 1 No Tulasnella calospora AL13/4D v1.0 6 6 No Postia placenta 6 2 No Wolfiporia cocos MD-104 SS10 v1.0 2 1 No Fomitopsis pinicola v1.0 3 2 No Fomitopsis pinicola FP-58527 SS1 v3.0 3 2 No Phanerochaete chrysosporium RP-78 2.1 3 2 No Dichomitus squalens 4 2 No Trametes versicolor v1.0 4 2 No Tremella mesenterica Witches' butter 7 2 No Daldinia eschscholzii EC12 v1.0 3 1 No Apiospora montagnei NRRL 25634 v1.0 3 1 No Magnaporthe poae ATCC 64411 22 3 1 No Magnaporthe grisea 70-15 3 1 No Podospora anserina 4 1 No Thielavia terrestris NRRL 8126 4 1 No Chaetomium globosum CBS 148.51 4 1 No Neurospora tetrasperma 3 1 No Neurospora discreta FGSC 8579 3 1 No Neurospora crassa OR74A 3 1 No Cryphonectria parasitica Chestnut blight fungus 3 1 No Acremonium alcalophilum v 1.0 3 1 No Glomerella graminicola 22 2 1 No Fusarium graminearum 4 2 No Nectria haematococca mpVI 3 1 No Fusarium oxysporum f. sp. lycopersici 4286 3 1 No Fusarium verticillioides 7600 3 1 No Trichoderma asperellum CBS 433.97 v1.0 4 2 No Trichoderma atroviride 4 2 No Trichoderma citrinoviride v1.0 3 1 No Trichoderma reesei 1.2 3 1 No Trichoderma virens Gv29-8 4 2 No Trichoderma longibrachiatum ATCC 18648 v1.0 3 1 No Trichoderma harzianum CBS 226.95 v1.0 4 2 No Didymella exigua CBS 183.55 v1.0 4 1 No Leptosphaeria maculans 22 4 1 No Pyrenophora teres f. teres 22 4 1 No Pyrenophora tritici-repentis 3 1 No Stagonospora nodorum 3 1 No Zasmidium cellare ATCC 36951 v1.0 4 1 No Dothistroma septosporum 4 1 No Septoria musiva v1.0 4 1 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 2 1 No Aspergillus zonatus v1.0 4 1 No Penicillium chrysogenum Wisconsin 54-1255 4 1 No Penicillium chrysogenum v1.0 4 1 No Aspergillus acidus v1.0 4 1 No Aspergillus fumigatus Af293 3 1 No Aspergillus brasiliensis v1.0 4 1 No Aspergillus nidulans FGSC A4 3 1 No Aspergillus sydowii v1.0 3 1 No Aspergillus versicolor v1.0 3 1 No Aspergillus glaucus 3 1 No Aspergillus carbonarius ITEM 5010 4 1 No Neosartorya fischeri NRRL 181 4 1 No Aspergillus terreus NIH2624 4 1 No Aspergillus tubingensis v1.0 4 1 No Aspergillus wentii v1.0 4 1 No Aspergillus oryzae RIB40 4 1 No Aspergillus niger 22 4 1 No Aspergillus niger ATCC 1015 4 1 No Aspergillus flavus NRRL3357 3 1 No Aspergillus clavatus NRRL 1 3 1 No Penicillium marneffei ATCC 18224 4 1 No Hansenula polymorpha v2.0 4 1 No Dekkera bruxellensis CBS 2499 v2.0 3 1 No Pichia membranifaciens v1.0 3 1 No Candida tanzawaensis NRRL Y-17324 v1.0 3 1 No Candida dubliniensis CD36 4 1 No Candida tropicalis MYA-3404 4 1 No Candida parapsilosis 3 1 No Candida albicans SC5314 4 1 No Lodderomyces elongisporus NRRL YB-4239 2 1 No Babjeviella inositovora NRRL Y-12698 v1.0 3 1 No Pichia stipitis CBS 6054 3 1 No Candida guilliermondii ATCC 6260 4 1 No Hyphopichia burtonii NRRL Y-1933 v1.0 3 1 No Debaromyces hansenii 4 1 No Wickerhamomyces anomalus 3 1 No Pichia pastoris GS115 3 1 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 2 1 No Yarrowia lipolytica CLIB122 3 1 No Candida lusitaniae ATCC 42720 3 1 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 4 1 No Vanderwaltozyma polyspora DSM 70294 3 1 No Candida glabrata CBS138 3 1 No Kluyveromyces thermotolerans CBS 6340 3 1 No Lachancea kluyveri 3 1 No Kluyveromyces waltii 3 1 No Ashbya gossypii ATCC 10895 3 1 No Zygosaccharomyces rouxii 3 1 No Saccharomyces mikatae MIT 3 1 No Saccharomyces paradoxus MIT 3 1 No Saccharomyces cerevisiae 76 Baker's yeast 3 1 No Saccharomyces bayanus MIT 3 1 No Kluyveromyces lactis 3 1 No Allomyces macrogynus ATCC 38327 8 4 No Spizellomyces punctatus DAOM BR117 1 1 No Dictyostelium discoideum 1 1 No Medicago truncatula Barrel medic 1 1 No Solanum lycopersicum v.2.3 Tomato 1 1 No Ostreococcus sp. RCC809 1 1 No Ostreococcus lucimarinus CCE9901 1 1 No Ostreococcus tauri 1 1 No Micromonas sp. RCC299 1 1 No Micromonas pusilla CCMP1545 v3.0 1 1 No Thecamonas trahens ATCC 50062 10 3 No Albugo laibachii 22 59 1 No Pythium iwayamai DAOM BR242034 22 51 1 No Pythium ultimum v1.7-2 58 4 No Pythium irregulare DAOM BR486 22 28 1 No Phytophthora infestans T30-4 14 2 No Tetrahymena thermophila SB210 1 56 50 No Ichthyophthirius multifiliis strain G5 2 2 No Symbiodinium minutum clade B1 v1.2 22 7 No Naegleria gruberi 1 1 No Trichomonas vaginalis 1 1 No Guillardia theta CCMP2712 v1.0 3 3 No Emiliania huxleyi CCMP1516 1 1 No Leptolyngbya sp. PCC 7376 1 1 No Pseudanabaena sp. PCC 7367 13 2 No Synechocystis sp. PCC 6803 10 1 No Synechococcus sp. PCC 7502 4 1 No Synechococcus sp. PCC 6312 1 1 No Microcoleus sp. PCC 7113 1 1 No Trichodesmium erythraeum IMS101 5 4 No Halothece sp. PCC 7418 8 5 No Gloeobacter violaceus PCC 7421 1 1 No Rivularia sp. PCC 7116 19 5 No Calothrix sp. PCC 7507 5 2 No Anabaena variabilis ATCC 29413 3 3 No Nostoc sp. PCC 7107 1 1 No Nostoc punctiforme PCC 73102 2 1 No Nostoc sp. PCC 7120 7 2 No Nostoc sp. PCC 7524 59 6 No Anabaena sp. 90 13 4 No Conexibacter woesei DSM 14684 6 2 No Eggerthella sp. YY7918 1 1 No Ilumatobacter coccineus 5 2 No Kineococcus radiotolerans SRS30216 1 1 No Catenulispora acidiphila DSM 44928 28 23 No Frankia alni ACN14a 3 1 No Streptosporangium roseum DSM 43021 3 1 No Kitasatospora setae KM-6054 2 2 No Streptomyces sp. PAMC26508 1 1 No Streptomyces sp. SirexAA-E 1 1 No Streptomyces bingchenggensis BCW-1 3 3 No Streptomyces violaceusniger Tu 4113 1 1 No Streptomyces avermitilis MA-4680 2 2 No Streptomyces cattleya NRRL 8057 = DSM 46488 3 3 No Streptomyces scabiei 87.22 1 1 No Streptomyces hygroscopicus subsp. jinggangensis 5008 2 2 No Actinosynnema mirum DSM 43827 1 1 No Amycolatopsis mediterranei U32 3 3 No Verrucosispora maris AB-18-032 1 1 No Micromonospora sp. L5 1 1 No Micromonospora aurantiaca ATCC 27029 1 1 No Actinoplanes sp. N902-109 5 3 No Actinoplanes sp. SE50/110 11 5 No Actinoplanes missouriensis 431 4 2 No Rhodococcus erythropolis PR4 2 2 No Corynebacterium resistens DSM 45100 3 2 No Corynebacterium glutamicum R 4 2 No Corynebacterium diphtheriae NCTC 13129 1 1 No Tropheryma whipplei TW08/27 5 3 No Microbacterium testaceum StLB037 1 1 No Intrasporangium calvum DSM 43043 2 1 No [Cellvibrio] gilvus ATCC 13127 3 1 No Arthrobacter aurescens TC1 2 1 No Arthrobacter sp. Rue61a 3 2 No Arthrobacter sp. FB24 1 1 No Mobiluncus curtisii ATCC 43063 1 1 No Caldilinea aerophila DSM 14535 = NBRC 104270 2 2 No Herpetosiphon aurantiacus DSM 785 1 1 No Roseiflexus castenholzii DSM 13941 9 2 No Chloroflexus sp. MS-G 1 1 No Chloroflexus sp. Y-400-fl 1 1 No Chloroflexus aggregans DSM 9485 1 1 No Chloroflexus aurantiacus J-10-fl 1 1 No Truepera radiovictrix DSM 17093 1 1 No Deinococcus gobiensis I-0 1 1 No Deinococcus deserti VCD115 1 1 No Deinococcus maricopensis DSM 21211 1 1 No Deinococcus geothermalis DSM 11300 1 1 No Deinococcus proteolyticus MRP 1 1 No Deinococcus radiodurans R1 1 1 No Oceanithermus profundus DSM 14977 1 1 No Marinithermus hydrothermalis DSM 14884 1 1 No Meiothermus ruber DSM 1279 1 1 No Finegoldia magna ATCC 29328 1 1 No Clostridium clariflavum DSM 19732 1 1 No Faecalibacterium prausnitzii 1 1 No Desulfotomaculum reducens MI-1 1 1 No Acetobacterium woodii DSM 1030 1 1 No Eubacterium limosum KIST612 1 1 No Clostridium sticklandii DSM 519 2 1 No Syntrophomonas wolfei subsp. wolfei str. Goettingen 1 1 No Heliobacterium modesticaldum Ice1 4 2 No Alkaliphilus metalliredigens QYMF 2 2 No Clostridium ljungdahlii DSM 13528 2 1 No Mahella australiensis 50-1 BON 1 1 No Caldicellulosiruptor saccharolyticus DSM 8903 1 1 No Aerococcus urinae ACS-120-V-Col10a 1 1 No Streptococcus macedonicus ACA-DC 198 48 1 No Kyrpidia tusciae DSM 2912 3 1 No Brevibacillus brevis NBRC 100599 1 1 No Paenibacillus sp. JDR-2 7 4 No Paenibacillus terrae HPL-003 1 1 No Paenibacillus mucilaginosus 3016 1 1 No Paenibacillus polymyxa M1 1 1 No Bacillus selenitireducens MLS10 1 1 No Solibacillus silvestris StLB046 1 1 No Macrococcus caseolyticus JCSC5402 14 1 No Staphylococcus lugdunensis HKU09-01 33 1 No Staphylococcus epidermidis RP62A 17 2 No Staphylococcus aureus subsp. aureus JH1 2 1 No Staphylococcus aureus 2 1 No Melioribacter roseus P3M 5 4 No Pelodictyon phaeoclathratiforme BU-1 5 3 No Chlorobium luteolum DSM 273 1 1 No Chlorobium chlorochromatii CaD3 5 2 No Chlorobium phaeobacteroides DSM 266 2 1 No Chlorobium limicola DSM 245 6 1 No Chlorobaculum parvum NCIB 8327 2 1 No Chloroherpeton thalassium ATCC 35110 9 1 No Haliscomenobacter hydrossis DSM 1100 10 4 No Niastella koreensis GR20-10 1 1 No Chitinophaga pinensis DSM 2588 12 4 No Salinibacter ruber M8 1 1 No Rhodothermus marinus DSM 4252 2 1 No Cyclobacterium marinum DSM 745 1 1 No Marivirga tractuosa DSM 4126 26 5 No Fibrella aestuarina 8 5 No Dyadobacter fermentans DSM 18053 4 2 No Spirosoma linguale DSM 74 6 5 No Runella slithyformis DSM 19594 12 4 No Paludibacter propionicigenes WB4 8 3 No Bacteroides thetaiotaomicron VPI-5482 2 2 No Bacteroides fragilis YCH46 1 1 No Pedobacter saltans DSM 12145 5 4 No Solitalea canadensis DSM 3403 11 2 No Pedobacter heparinus DSM 2366 10 6 No Fluviicola taffensis DSM 16823 2 1 No Owenweeksia hongkongensis DSM 17368 1 1 No Gramella forsetii KT0803 16 1 No Maribacter sp. HTCC2170 3 2 No Robiginitalea biformata HTCC2501 3 2 No Aequorivita sublithincola DSM 14238 1 1 No Zobellia galactanivorans 3 2 No Muricauda ruestringensis DSM 13258 8 4 No Flavobacterium indicum GPTSA100-9 1 1 No Fibrobacter succinogenes subsp. succinogenes S85 15 2 No Parachlamydia acanthamoebae UV-7 2 1 No Isosphaera pallida ATCC 43644 7 3 No Planctomyces brasiliensis DSM 5305 2 1 No Rhodopirellula baltica SH 1 39 10 No Pirellula staleyi DSM 6068 8 6 No Coraliomargarita akajimensis DSM 45221 1 1 No Opitutus terrae PB90-1 25 10 No Turneriella parva DSM 21527 2 1 No Leptospira borgpetersenii serovar Hardjo-bovis str. L550 1 1 No Leptospira interrogans serovar Lai str. IPAV 11 5 No Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 1 1 No Treponema azotonutricium ZAS-9 1 1 No Denitrovibrio acetiphilus DSM 12809 4 2 No Fervidobacterium pennivorans DSM 9078 1 1 No Candidatus Chloracidobacterium thermophilum B 1 1 No Candidatus Solibacter usitatus Ellin6076 97 13 No Granulicella tundricola MP5ACTX9 10 3 No Granulicella mallensis MP5ACTX8 8 4 No Candidatus Koribacter versatilis Ellin345 7 5 No Terriglobus saanensis SP1PR4 2 2 No Terriglobus roseus DSM 18391 3 1 No Acidobacterium capsulatum ATCC 51196 5 2 No Candidatus Nitrospira defluvii 9 2 No Candidatus Methylomirabilis oxyfera 2 1 No Bacteriovorax marinus SJ 2 2 No Bdellovibrio bacteriovorus HD100 1 1 No Arcobacter sp. L 11 4 No Arcobacter nitrofigilis DSM 7299 8 2 No Arcobacter butzleri RM4018 4 1 No Sulfurimonas denitrificans DSM 1251 1 1 No Syntrophus aciditrophicus SB 1 1 No Desulfomonile tiedjei DSM 6799 20 3 No Desulfotalea psychrophila LSv54 1 1 No Desulfatibacillum alkenivorans AK-01 21 5 No Desulfococcus oleovorans Hxd3 2 2 No Desulfovibrio piezophilus 3 1 No Desulfovibrio aespoeensis Aspo-2 2 1 No Geobacter daltonii FRC-32 11 4 No Geobacter sp. M21 19 1 No Geobacter uraniireducens Rf4 12 4 No Geobacter bemidjiensis Bem 36 3 No Geobacter sulfurreducens KN400 17 2 No Geobacter metallireducens GS-15 6 1 No Pelobacter propionicus DSM 2379 2 1 No Stigmatella aurantiaca DW4/3-1 5 4 No Corallococcus coralloides DSM 2259 6 4 No Myxococcus xanthus DK 1622 9 6 No Myxococcus fulvus HW-1 10 7 No Azoarcus sp. BH72 4 1 No Aromatoleum aromaticum EbN1 2 1 No Dechlorosoma suillum PS 4 1 No Pseudogulbenkiania sp. NH8B 1 1 No Chromobacterium violaceum ATCC 12472 1 1 No Candidatus Accumulibacter phosphatis clade IIA str. UW-1 13 3 No beta proteobacterium CB 1 1 No Rubrivivax gelatinosus IL144 10 6 No Leptothrix cholodnii SP-6 24 2 No Cupriavidus metallidurans CH34 3 1 No Cupriavidus necator N-1 2 1 No Ralstonia solanacearum CFBP2957 9 2 No Burkholderia gladioli BSR3 1 1 No Burkholderia glumae BGR1 1 1 No Alicycliphilus denitrificans K601 1 1 No Ramlibacter tataouinensis TTB310 4 2 No Delftia sp. Cs1-4 9 5 No Delftia acidovorans SPH-1 4 3 No Variovorax paradoxus S110 11 1 No Rhodoferax ferrireducens T118 2 2 No Acidovorax avenae subsp. avenae ATCC 19860 3 1 No Comamonas testosteroni CNB-2 2 1 No Collimonas fungivorans Ter331 10 1 No Bordetella parapertussis 12822 3 1 No Bordetella bronchiseptica RB50 8 1 No Achromobacter xylosoxidans A8 4 3 No Nitrosomonas sp. Is79A3 1 1 No Sideroxydans lithotrophicus ES-1 4 1 No Gallionella capsiferriformans ES-2 2 1 No Methylotenera versatilis 301 2 1 No Magnetococcus marinus MC-1 61 6 No Parvularcula bermudensis HTCC2503 2 1 No Brevundimonas subvibrioides ATCC 15264 7 1 No Caulobacter sp. K31 3 1 No Sphingopyxis alaskensis RB2256 1 1 No Novosphingobium aromaticivorans DSM 12444 2 1 No Sphingobium japonicum UT26S 8 2 No Sphingobium chlorophenolicum L-1 9 3 No Maricaulis maris MCS10 11 2 No Hyphomonas neptunium ATCC 15444 1 1 No Dinoroseobacter shibae DFL 12 1 1 No Pseudovibrio sp. FO-BEG1 2 2 No Rhodobacter sphaeroides ATCC 17029 2 1 No Rhodospirillum photometricum DSM 122 4 1 No Tistrella mobilis KA081020-065 30 2 No Magnetospirillum magneticum AMB-1 17 4 No Rhodospirillum centenum SW 15 5 No Azospirillum lipoferum 4B 2 2 No Azospirillum sp. B510 1 1 No Azospirillum brasilense Sp245 1 1 No Micavibrio aeruginosavorus ARL-13 1 1 No Candidatus Puniceispirillum marinum IMCC1322 9 4 No Methylobacterium extorquens AM1 47 3 No Sinorhizobium meliloti AK83 4 2 No Genome sequence of Rhizobium sp. strain IRBG74 4 1 No Rhizobium etli CIAT 652 4 2 No Rhizobium leguminosarum bv. viciae 3841 6 3 No Agrobacterium tumefaciens str. C58 1 1 No Agrobacterium sp. H13-3 4 1 No Agrobacterium vitis S4 7 1 No Hyphomicrobium sp. MC1 1 1 No Nitrobacter hamburgensis X14 2 1 No Bradyrhizobium japonicum USDA 110 4 1 No Saccharophagus degradans 2-40 42 5 No Teredinibacter turnerae T7901 20 5 No Cellvibrio japonicus Ueda107 25 5 No Oceanimonas sp. GK1 2 1 No Aliivibrio salmonicida LFI1238 11 1 No Vibrio fischeri MJ11 10 1 No Vibrio sp. Ex25 6 3 No Vibrio parahaemolyticus RIMD 2210633 2 2 No Vibrio furnissii NCTC 11218 7 2 No Vibrio vulnificus MO6-24/O 1 1 No Vibrio cholerae O395 4 1 No Psychromonas ingrahamii 37 1 1 No Ferrimonas balearica DSM 9799 2 2 No Shewanella piezotolerans WP3 4 4 No Shewanella loihica PV-4 6 3 No Shewanella halifaxensis HAW-EB4 2 2 No Shewanella denitrificans OS217 1 1 No Shewanella pealeana ATCC 700345 2 2 No Shewanella oneidensis MR-1 6 3 No Shewanella baltica OS185 16 2 No Shewanella woodyi ATCC 51908 11 7 No Shewanella amazonensis SB2B 1 1 No Shewanella violacea DSS12 1 1 No Shewanella frigidimarina NCIMB 400 21 2 No Shewanella putrefaciens CN-32 16 2 No Colwellia psychrerythraea 34H 17 2 No Pseudoalteromonas atlantica T6c 1 1 No Pseudoalteromonas haloplanktis TAC125 2 2 No Glaciecola sp. 4H-3-7+YE-5 1 1 No Marinobacter adhaerens HP15 1 1 No Marinobacter hydrocarbonoclasticus ATCC 49840 1 1 No Alteromonas macleodii str. 'Deep ecotype' 1 1 No Kangiella koreensis DSM 16069 3 2 No Hahella chejuensis KCTC 2396 26 8 No Marinomonas posidonica IVIA-Po-181 4 2 No Marinomonas sp. MWYL1 16 2 No Marinomonas mediterranea MMB-1 1 1 No Methylomonas methanica MC09 3 3 No Rhodanobacter denitrificans 15 1 No Xanthomonas axonopodis pv. citri str. 306 3 1 No Xanthomonas oryzae pv. oryzae PXO99A 5 1 No Xanthomonas campestris pv. campestris str. B100 9 1 No Allochromatium vinosum DSM 180 3 1 No Thiocystis violascens DSM 198 2 1 No Nitrosococcus watsonii C-113 1 1 No gamma proteobacterium HdN1 1 1 No Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 1 1 No Dickeya dadantii Ech703 2 1 No Dickeya zeae Ech1591 8 2 No Pectobacterium wasabiae WPP163 16 3 No Pectobacterium sp. SCC3193 16 3 No Pectobacterium atrosepticum SCRI1043 2 1 No Pectobacterium carotovorum subsp. carotovorum PC1 14 2 No Pantoea sp. At-9b 2 1 No Cronobacter turicensis z3032 2 1 No Pseudomonas sp. UW4 4 2 No Pseudomonas brassicacearum subsp. brassicacearum NFM421 2 1 No Pseudomonas syringae pv. tomato str. DC3000 1 1 No Pseudomonas protegens Pf-5 4 1 No Pseudomonas sp. VLB120 6 1 No Psychrobacter sp. PRwf-1 1 1 No Acinetobacter baumannii ATCC 17978 2 1 No Methylophaga sp. JAM1 4 1 No Thioalkalimicrobium cyclicum ALM1 1 1 No Cenarchaeum symbiosum A 1 1 No Candidatus Nitrosopumilus sp. AR2 1 1 No Nitrosopumilus maritimus SCM1 2 2 No Candidatus Korarchaeum cryptofilum OPF8 1 1 No Methanocella arvoryzae MRE50 6 1 No Methanococcoides burtonii DSM 6242 2 2 No Methanosarcina acetivorans C2A 2 2 No Methanosarcina mazei Go1 1 1 No Methanosarcina barkeri str. Fusaro 2 2 No Thermoplasmatales archaeon BRNA1 2 2 No Haloquadratum walsbyi DSM 16790 1 1 No Haloferax volcanii DS2 1 1 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 892 118 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 499 38 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 300 41 No Ascaris suum Victoria/Ghent Pig roundworm 124 29 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 155 20 No Cryptococcus neoformans var. grubii H99 3 1 No Cryptococcus neoformans B-3501A 3 1 No Cryptococcus neoformans JEC21 3 1 No Aspergillus fumigatus A1163 3 1 No Candida albicans WO-1 4 1 No Saccharomyces cerevisiae UC5 3 1 No Saccharomyces cerevisiae PW5 3 1 No Saccharomyces cerevisiae CLIB324 3 1 No Saccharomyces cerevisiae CBS7960 3 1 No Saccharomyces cerevisiae T7 3 1 No Saccharomyces cerevisiae FostersB 3 1 No Saccharomyces cerevisiae FostersO 2 1 No Saccharomyces cerevisiae VL3 2 1 No Saccharomyces cerevisiae Vin13 3 1 No Saccharomyces cerevisiae LalvinQA23 3 1 No Saccharomyces cerevisiae Sigma1278b 3 1 No Saccharomyces cerevisiae W303 3 1 No Saccharomyces cerevisiae JAY291 3 1 No Saccharomyces cerevisiae AWRI1631 3 1 No Saccharomyces cerevisiae YPS163 3 1 No Saccharomyces cerevisiae T73 3 1 No Saccharomyces cerevisiae Y10 3 1 No Saccharomyces cerevisiae YJM789 3 1 No Saccharomyces cerevisiae YJM789 3 1 No Saccharomyces cerevisiae RM11-1a 3 1 No Saccharomyces cerevisiae RM11-1a 3 1 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 3 1 No Synechocystis sp. PCC 6803 substr. PCC-P 10 1 No Synechocystis sp. PCC 6803 substr. PCC-N 10 1 No Synechocystis sp. PCC 6803 substr. GT-I 10 1 No Synechocystis sp. PCC 6803 10 1 No Dactylococcopsis salina PCC 8305 67 20 No Prochlorococcus marinus str. AS9601 4 1 No Oscillatoria nigro-viridis PCC 7112 38 9 No Oscillatoria acuminata PCC 6304 5 4 No Arthrospira platensis NIES-39 1 1 No Cyanothece sp. PCC 7822 58 11 No Cyanothece sp. ATCC 51142 3 1 No Gloeobacter kilaueensis Gloeobacter sp. JS 1 1 No Calothrix parietina Calothrix sp. PCC 6303 1 1 No Cylindrospermum stagnale PCC 7417 16 4 No Anabaena cylindrica PCC 7122 28 8 No Frankia sp. EuI1c 1 1 No Streptomyces rapamycinicus NRRL 5491 1 1 No Streptomyces collinus Tu 365 2 2 No Streptomyces cattleya NRRL 8057 = DSM 46488 3 3 No Streptomyces hygroscopicus subsp. jinggangensis TL01 2 2 No Saccharothrix espanaensis DSM 44229 5 5 No Amycolatopsis mediterranei RB 3 3 No Amycolatopsis mediterranei S699 3 3 No Amycolatopsis mediterranei S699 3 3 No Actinoplanes friuliensis DSM 7358 1 1 No Rhodococcus erythropolis CCM2595 2 2 No Mycobacterium gilvum Spyr1 1 1 No Corynebacterium callunae DSM 20147 1 1 No Corynebacterium glutamicum SCgG2 3 2 No Corynebacterium glutamicum SCgG1 3 2 No Corynebacterium glutamicum ATCC 13032 1 1 No Corynebacterium glutamicum ATCC 13032 1 1 No Corynebacterium glutamicum ATCC 13032 1 1 No Corynebacterium diphtheriae BH8 1 1 No Corynebacterium diphtheriae INCA 402 1 1 No Corynebacterium diphtheriae VA01 1 1 No Corynebacterium diphtheriae HC04 1 1 No Corynebacterium diphtheriae HC03 1 1 No Corynebacterium diphtheriae HC02 1 1 No Corynebacterium diphtheriae HC01 1 1 No Corynebacterium diphtheriae 241 1 1 No Corynebacterium diphtheriae CDCE 8392 1 1 No Corynebacterium diphtheriae C7 (beta) 1 1 No Corynebacterium diphtheriae 31A 1 1 No Tropheryma whipplei str. Twist 5 3 No Leifsonia xyli subsp. cynodontis DSM 46306 1 1 No Deinococcus peraridilitoris DSM 19664 1 1 No [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 1 1 No Desulfitobacterium dichloroeliminans LMG P-21439 1 1 No Desulfotomaculum gibsoniae DSM 7213 1 1 No Clostridium autoethanogenum DSM 10061 2 1 No Lactobacillus reuteri JCM 1112 1 1 No Lactobacillus acidophilus NCFM 4 1 No Streptococcus agalactiae 09mas018883 2 1 No Paenibacillus sp. Y412MC10 2 2 No Paenibacillus mucilaginosus KNP414 2 2 No Paenibacillus mucilaginosus K02 3 3 No Paenibacillus polymyxa SC2 1 1 No Bacillus infantis NRRL B-14911 2 1 No Bacillus megaterium WSH-002 19 1 No Staphylococcus aureus subsp. aureus MSHR1132 2 1 No Staphylococcus pasteuri SP1 2 1 No Staphylococcus lugdunensis N920143 12 1 No Staphylococcus warneri SG1 2 1 No Staphylococcus aureus CA-347 2 1 No Staphylococcus aureus Bmb9393 2 1 No Staphylococcus aureus M1 2 1 No Staphylococcus aureus 08BA02176 2 1 No Staphylococcus aureus ST228/18412 2 1 No Staphylococcus aureus ST228/18341 2 1 No Staphylococcus aureus ST228/16125 2 1 No Staphylococcus aureus ST228/16035 2 1 No Staphylococcus aureus ST228/15532 2 1 No Staphylococcus aureus ST228/10497 2 1 No Staphylococcus aureus ST228/10388 2 1 No Staphylococcus aureus 04-02981 2 1 No Staphylococcus aureus subsp. aureus Z172 2 1 No Staphylococcus aureus subsp. aureus 6850 2 1 No Staphylococcus aureus subsp. aureus SA957 2 1 No Staphylococcus aureus subsp. aureus CN1 2 1 No Staphylococcus aureus subsp. aureus SA40 2 1 No Staphylococcus aureus subsp. aureus 11819-97 2 1 No Staphylococcus aureus subsp. aureus M013 2 1 No Staphylococcus aureus subsp. aureus VC40 2 1 No Staphylococcus aureus subsp. aureus T0131 2 1 No Staphylococcus aureus subsp. aureus LGA251 2 1 No Staphylococcus aureus subsp. aureus ECT-R 2 2 1 No Staphylococcus aureus subsp. aureus JKD6159 2 1 No Staphylococcus aureus subsp. aureus ED133 2 1 No Staphylococcus aureus subsp. aureus ED98 2 1 No Staphylococcus aureus subsp. aureus TW20 2 1 No Staphylococcus aureus subsp. aureus 55/2053 2 1 No Staphylococcus aureus subsp. aureus TCH60 2 1 No Staphylococcus aureus subsp. aureus str. JKD6008 2 1 No Staphylococcus aureus subsp. aureus 71193 2 1 No Staphylococcus aureus subsp. aureus S0385 2 1 No Staphylococcus aureus subsp. aureus str. Newman 2 1 No Staphylococcus aureus subsp. aureus Mu3 2 1 No Staphylococcus aureus subsp. aureus USA300_TCH1516 2 1 No Staphylococcus aureus subsp. aureus USA300_FPR3757 2 1 No Staphylococcus aureus subsp. aureus JH9 2 1 No Staphylococcus aureus subsp. aureus MSSA476 2 1 No Staphylococcus aureus subsp. aureus MRSA252 2 1 No Staphylococcus aureus subsp. aureus MW2 2 1 No Staphylococcus aureus subsp. aureus N315 2 1 No Staphylococcus aureus subsp. aureus Mu50 2 1 No Staphylococcus aureus subsp. aureus COL 2 1 No Staphylococcus aureus subsp. aureus NCTC 8325 2 1 No Salinibacter ruber DSM 13855 1 1 No Rhodothermus marinus SG0.5JP17-172 3 2 No Emticicia oligotrophica DSM 17448 4 4 No Bacteroides fragilis 638R 1 1 No Bacteroides fragilis NCTC 9343 1 1 No Fibrobacter succinogenes subsp. succinogenes S85 15 2 No Chlamydia trachomatis J/6276tet1 2 1 No Chlamydia trachomatis RC-J(s)/122 2 1 No Chlamydia trachomatis RC-F(s)/342 2 1 No Chlamydia trachomatis RC-Fs852 2 1 No Singulisphaera acidiphila DSM 18658 7 5 No Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 1 1 No Leptospira interrogans serovar Lai str. 56601 11 5 No Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 9 4 No Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 1 1 No Bdellovibrio bacteriovorus str. Tiberius 1 1 No Arcobacter butzleri ED-1 4 1 No Desulfocapsa sulfexigens DSM 10523 3 2 No Desulfobacula toluolica Tol2 2 1 No Geobacter sp. M18 6 4 No Geobacter sulfurreducens PCA 17 2 No Anaeromyxobacter sp. K 1 1 No Myxococcus stipitatus DSM 14675 9 5 No Ralstonia pickettii 12J 8 1 No Ralstonia solanacearum FQY_4 8 1 No Ralstonia solanacearum Po82 10 3 No Ralstonia solanacearum PSI07 10 2 No Ralstonia solanacearum CMR15 8 1 No Ralstonia solanacearum GMI1000 8 1 No Burkholderia sp. CCGE1003 1 1 No Burkholderia sp. KJ006 1 1 No Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 13 1 No Alicycliphilus denitrificans BC 1 1 No Variovorax paradoxus B4 11 1 No Bordetella parapertussis Bpp5 2 1 No Bordetella bronchiseptica MO149 6 1 No Bordetella bronchiseptica 253 7 1 No Phaeobacter gallaeciensis DSM 26640 5 1 No Rhodobacter sphaeroides KD131 2 1 No Rhodobacter sphaeroides ATCC 17025 1 1 No Magnetospirillum gryphiswaldense MSR-1 v2 16 11 No Rhizobium etli CFN 42 2 1 No Rhizobium etli bv. mimosae str. Mim1 2 1 No Rhizobium leguminosarum bv. trifolii WSM2304 8 3 No Rhizobium leguminosarum bv. trifolii WSM1325 6 3 No Rhodopseudomonas palustris HaA2 3 3 No Bradyrhizobium oligotrophicum S58 15 2 No Bradyrhizobium japonicum USDA 6 1 1 No Simiduia agarivorans SA1 = DSM 21679 2 2 No Vibrio fischeri ES114 7 1 No Vibrio sp. EJY3 6 1 No Vibrio alginolyticus NBRC 15630 = ATCC 17749 4 2 No Vibrio nigripulchritudo VibrioScope 2 2 No Vibrio cholerae M66-2 7 1 No Vibrio cholerae O395 4 1 No Vibrio cholerae O1 str. 2010EL-1786 3 1 No Vibrio cholerae MJ-1236 3 1 No Shewanella sp. W3-18-1 7 2 No Shewanella sp. ANA-3 14 1 No Shewanella baltica BA175 2 1 No Shewanella baltica OS678 13 2 No Shewanella baltica OS117 2 1 No Shewanella baltica OS223 1 1 No Shewanella baltica OS195 16 2 No Shewanella baltica OS155 2 1 No Shewanella putrefaciens 200 14 2 No Glaciecola psychrophila 170 5 4 No Alteromonas macleodii str. 'Ionian Sea UM4b' 1 1 No Alteromonas macleodii str. 'Ionian Sea UM7' 1 1 No Alteromonas macleodii str. 'English Channel 615' 1 1 No Alteromonas macleodii AltDE1 1 1 No Alteromonas macleodii str. 'Black Sea 11' 1 1 No Alteromonas macleodii ATCC 27126 1 1 No Thalassolituus oleivorans MIL-1 15 2 No Stenotrophomonas maltophilia JV3 10 1 No Xanthomonas citri subsp. citri Aw12879 3 1 No Xanthomonas campestris pv. vesicatoria str. 85-10 5 1 No Xanthomonas axonopodis pv. citrumelo F1 5 1 No Xanthomonas axonopodis Xac29-1 3 1 No Xanthomonas oryzae pv. oryzae MAFF 311018 5 1 No Xanthomonas oryzae pv. oryzae KACC 10331 4 1 No Xanthomonas campestris pv. raphani 756C 9 1 No Xanthomonas campestris pv. campestris str. 8004 9 1 No Xanthomonas campestris pv. campestris str. ATCC 33913 9 1 No Dickeya dadantii Ech586 3 1 No Dickeya dadantii 3937 2 1 No Pectobacterium carotovorum subsp. carotovorum PCC21 2 1 No Cronobacter sakazakii CMCC 45402 2 1 No Cronobacter sakazakii SP291 2 1 No Cronobacter sakazakii ATCC BAA-894 2 1 No Pseudomonas denitrificans ATCC 13867 3 1 No Pseudomonas syringae pv. phaseolicola 1448A 1 1 No Pseudomonas syringae pv. syringae B728a 1 1 No Pseudomonas protegens CHA0 4 1 No Pseudomonas fluorescens F113 2 1 No Pseudomonas resinovorans NBRC 106553 1 1 No Pseudomonas mendocina NK-01 7 1 No Acinetobacter baumannii ATCC 19606 2 1 No Methylophaga sp. JAM7 4 1 No Candidatus Nitrososphaera gargensis Ga9.2 1 1 No Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1 2 2 No Methanomethylovorans hollandica DSM 15978 9 6 No Methanolobus psychrophilus R15 11 3 No Methanosarcina mazei Tuc01 1 1 No Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 1 1 No Haloquadratum walsbyi C23 1 1 No Natronomonas moolapensis 8.8.11 9 2 No Homo sapiens 75_37 (old version GRC) Human 2051 355 No Homo sapiens Human 1556 235 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 627 89 No Heliconius numata 2 2 No Loa loa v3.3 (Request) Eye worm 123 22 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 113 44 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 101 15 No Ricinus communis Castor bean 7 4 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1 No Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1 No Homo sapiens 69_37 Human 816 116 No Pan troglodytes 69_2.1.4 Chimpanzee 642 87 No Gorilla gorilla 69_3.1 Western gorilla 548 74 No Pongo abelii 69_2 Sumatran orangutan 503 74 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 559 76 No Macaca mulatta 69_1 Rhesus monkey 518 76 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 555 74 No Otolemur garnettii 69_3 Small-eared galago 593 83 No Microcebus murinus 69_1 Gray mouse lemur 448 68 No Rattus norvegicus 69_3.4 Norway rat 782 101 No Mus musculus 69_38 House mouse 633 91 No Dipodomys ordii 69_1 Ord's kangaroo rat 418 67 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 584 91 Yes Cavia porcellus 69_3 Domestic guinea pig 527 74 No Oryctolagus cuniculus 69_2 Rabbit 547 75 No Ochotona princeps 69 American pika 440 70 No Tupaia belangeri 69 Northern tree shrew 409 62 No Sus scrofa 69_10.2 Pig 595 94 No Bos taurus 69_3.1 Cattle 642 90 No Vicugna pacos 69_1 Alpaca 348 60 No Tursiops truncatus 69_1 Bottlenose dolphin 508 74 No Mustela putorius furo 69_1.0 Domestic ferret 544 71 No Ailuropoda melanoleuca 69_1 Giant panda 621 85 No Canis familiaris 69_3.1 Dog 550 72 No Felis catus 69 Domestic cat 398 69 No Equus caballus 69_2 Horse 571 78 No Myotis lucifugus 69_2.0 Little brown bat 627 84 No Pteropus vampyrus 69_1 Large flying fox 523 77 No Sorex araneus 69_1 European shrew 374 62 No Erinaceus europaeus 69 Western European hedgehog 428 68 No Procavia capensis 69_1 Cape rock hyrax 483 75 No Loxodonta africana 69_3 African savanna elephant 474 69 No Echinops telfairi 69 Small Madagascar hedgehog 402 65 No Dasypus novemcinctus 69_2 Nine-banded armadillo 341 60 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 297 54 No Macropus eugenii 69_1.0 Tammar wallaby 418 70 No Sarcophilus harrisii 69_7.0 Tasmanian devil 605 82 No Monodelphis domestica 69_5 Gray short-tailed opossum 587 81 No Ornithorhynchus anatinus 69_5 Platypus 507 108 No Petromyzon marinus 69_7.0 Sea lamprey 183 34 No Meleagris gallopavo 69_2 Turkey 506 63 No Gallus gallus 69_2 Chicken 511 65 No Taeniopygia guttata 69_3.2.4 Zebra finch 480 64 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 508 75 No Anolis carolinensis 69_2.0 Green anole 879 133 No Xenopus tropicalis 69_4.2 Tropical clawed frog 605 84 No Latimeria chalumnae 69_1 Coelacanth 629 84 No Gadus morhua 69_1 Atlantic cod 728 98 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 715 99 No Takifugu rubripes 69_4 Torafugu 902 115 No Gasterosteus aculeatus 69_1 Three-spined stickleback 736 91 No Oryzias latipes 69_1 Japanese medaka 692 86 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 722 105 No Oreochromis niloticus 69_1.0 Nile tilapia 847 106 No Danio rerio 69_9 Zebrafish 1300 196 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 112 12 No Ciona intestinalis 69 Vase tunicate 116 18 No Drosophila melanogaster 69_5 Fruit fly 215 18 No Caenorhabditis elegans 69_215 Roundworm 135 16 No Saccharomyces cerevisiae 69_4 Baker's yeast 3 1 No 1_Upper_euphotic (meta-genome) 13 8 No 2_050719S (meta-genome) 4 2 No 2_Base_of_chrolophyll_max (meta-genome) 3 3 No 3_050719R (meta-genome) 3 2 No 3_Below_base_of_euphotic (meta-genome) 12 11 No 4_050719Q (meta-genome) 42 21 No 4_Deep_abyss (meta-genome) 14 9 No 5_050719P (meta-genome) 8 6 No 5_Below_upper_mesopelagic (meta-genome) 10 6 No 6_Upper_euphotic (meta-genome) 25 16 No 7_Oxygen_minimum_layer (meta-genome) 13 11 No Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 12 12 No Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome) 6 6 No Air microbial communities Singapore indoor air filters 1 (meta-genome) 3 3 No Air microbial communities Singapore indoor air filters 2 (meta-genome) 2 1 No Atta cephalotes fungus garden (ACEF) (meta-genome) 2 2 No Bath Hot Springs, planktonic community (meta-genome) 4 3 No Combined (meta-genome) 14 13 No Cyphomyrmex longiscapus fungus garden (meta-genome) 11 11 No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 6 5 No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 3 1 No Dump bottom (Dump bottom) (meta-genome) 64 58 No Dump top (Dump top) (meta-genome) 34 32 No Endophytic microbiome from Rice (meta-genome) 6 5 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 40 26 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 14 7 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 22 11 No Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 14 8 No Fungus garden combined (combined) (meta-genome) 6 5 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 11 9 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 11 11 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 7 5 No Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 15 9 No Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 7 7 No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 11 9 No Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 17 11 No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 16 11 No Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 6 4 No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 6 6 No Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 5 4 No Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 5 5 No Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome) 2 2 No Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) 16 12 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 11 8 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 13 12 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 5 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 15 5 No Human Gut Community Subject 7 (meta-genome) 1 1 No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 2 2 No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 24 22 No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 31 31 No Marine anammox bioreactor enriched for Scalindua species (meta-genome) 13 9 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 309 197 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 75 49 No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 8 6 No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 98 65 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 86 53 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 43 25 No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 29 27 No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 31 28 No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 5 3 No Mouse Gut Community ob1 (meta-genome) 1 1 No NCBI 2017_08 genome 396556 68391 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 86 60 No Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome) 5 3 No Protozoadb 2010_08 (Protozoadb) 2 2 No simHC - Simulated High Complexity Metagenome (meta-genome) 55 35 No simLC - Simulated Low Complexity Metagenome (meta-genome) 24 17 No simMC - Simulated Medium Complexity Metagenome (meta-genome) 29 17 No Single-cell genome from subgingival tooth surface TM7a (meta-genome) 2 1 No Single-cell genome from subgingival tooth surface TM7c (meta-genome) 2 1 No Sludge/Australian, Phrap Assembly (meta-genome) 38 15 No Sludge/US, Jazz Assembly (meta-genome) 20 8 No Sludge/US, Phrap Assembly (meta-genome) 32 15 No Soil microbial communities from Minnesota Farm (meta-genome) 49 34 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 114 104 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 64 58 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 42 42 No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 50 45 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 73 65 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 70 64 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 10 6 No STRING v9.0.5 (STRING) 22301 3338 No Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 13 12 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 44 43 No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 19 18 No Termite Protist Endosymbiont Community (meta-genome) 1 1 No Uniprot 2018_03 genome 232798 44369 No Uranium Contaminated Groundwater FW106 (meta-genome) 2 2 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 37 23 No Global Ocean Sampling Expedition (GOS) 6615 3717 No NCBI plasmid sequences (Plasmids) 261 57 No NCBI viral sequences (Viral) 2 2 No PDB chains (SCOP 1.75 ) (PDB) 29 14 No Protein Data Bank (all PDB sequenc) 731 295 No SCOP2 SCOPe CATH ECOD (all domain sequ) 963 961 No TargetDB 253 77
