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PapD-like superfamily domain assignments
in
Sinorhizobium medicae WSM419

Assignment details

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Sinorhizobium medicae WSM419 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|150377601|ref|YP_001314196.1|   0.0000000000000602   25-141   Pilus chaperone  

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Select to display   Genome       Domains   Proteins
No Yes ALL   376061 376061
No Yes Homo sapiens 76_38 Human 20 20
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 8 8
No Yes Gorilla gorilla 76_3.1 Western gorilla 9 9
No Yes Pongo abelii 76_2 Sumatran orangutan 6 6
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 5 5
No Yes Papio anubis 76 Olive baboon 7 7
No Yes Macaca mulatta 76_1 Rhesus monkey 11 11
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 14 14
No Yes Otolemur garnettii 76_3 Small-eared galago 8 8
No Yes Microcebus murinus 76_1 Gray mouse lemur 5 5
No Yes Rattus norvegicus 76_5.0 Norway rat 9 9
No Yes Mus musculus 76_38 House mouse 13 13
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 5 5
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 5 5
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 6 6
No Yes Cavia porcellus 76_3 Domestic guinea pig 6 6
No Yes Oryctolagus cuniculus 76_2 Rabbit 6 6
No Yes Ochotona princeps 76 American pika 4 4
No Yes Tupaia belangeri 76 Northern tree shrew 6 6
No Yes Sus scrofa 76_10.2 Pig 12 12
No Yes Bos taurus 76_3.1 Cattle 7 7
No Yes Ovis aries 76_3.1 Sheep 8 8
No Yes Vicugna pacos 76_1 Alpaca 5 5
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 5 5
No Yes Mustela putorius furo 76_1.0 Domestic ferret 5 5
No Yes Ailuropoda melanoleuca 76_1 Giant panda 7 7
No Yes Canis familiaris 76_3.1 Dog 8 8
No Yes Felis catus 76_6.2 Domestic cat 9 9
No Yes Equus caballus 76_2 Horse 6 6
No Yes Myotis lucifugus 76_2.0 Little brown bat 8 7
No Yes Pteropus vampyrus 76_1 Large flying fox 6 6
No Yes Sorex araneus 76_1 European shrew 4 4
No Yes Erinaceus europaeus 76 Western European hedgehog 7 7
No Yes Procavia capensis 76_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 76_3 African savanna elephant 12 12
No Yes Echinops telfairi 76 Small Madagascar hedgehog 6 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 12 12
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 4 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 4 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 11 11
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 7 7
No Yes Ornithorhynchus anatinus 76_5 Platypus 5 5
No Yes Saccoglossus kowalevskii v3.0   13 13
No Yes Petromyzon marinus 76_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 76_2 Turkey 6 6
No Yes Gallus gallus 76_4 Chicken 4 4
No Yes Anas platyrhynchos 76_1.0 Mallard 7 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 7 7
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 5 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 4 4
No Yes Anolis carolinensis 76_2.0 Green anole 6 6
No Yes Xenopus laevis African clawed frog 11 11
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 10 10
No Yes Latimeria chalumnae 76_1 Coelacanth 8 8
No Yes Lepisosteus oculatus 76 Spotted gar 8 8
No Yes Gadus morhua 76_1 Atlantic cod 5 5
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 6 6
No Yes Takifugu rubripes 76_4 Torafugu 8 8
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 6 6
No Yes Oryzias latipes 76_1 Japanese medaka 11 11
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 5 5
No Yes Poecilia formosa 76 Amazon molly 7 7
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 10 10
No Yes Astyanax mexicanus 76 Mexican tetra 5 5
No Yes Danio rerio 76_9 Zebrafish 5 5
No Yes Oikopleura dioica   5 5
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 3 3
No Yes Ciona intestinalis 76 Vase tunicate 6 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 9 9
No Yes Adineta vaga   16 16
No Yes Octopus bimaculoides 280   4 4
No Yes Crassostrea gigas 22 Pacific oyster 3 3
No Yes Lottia gigantea Owl limpet 5 5
No Yes Helobdella robusta   6 6
No Yes Capitella sp. I   7 7
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 4
No Yes Heliconius melpomene Postman butterfly 5 4
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 3 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 4 4
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 3 3
No Yes Linepithema humile v1.1 Argentine ant 3 3
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 4 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 3 3
No Yes Atta cephalotes v1.1   3 3
No Yes Camponotus floridanus v3.3 Florida carpenter ant 3 3
No Yes Lucilia cuprina Australian sheep blowfly 2 2
No Yes Drosophila grimshawi 1.3   4 4
No Yes Drosophila willistoni 1.3   4 4
No Yes Drosophila pseudoobscura 2.13   8 8
No Yes Drosophila persimilis 1.3   8 8
No Yes Drosophila suzukii   5 5
No Yes Drosophila yakuba 1.3   6 5
No Yes Drosophila simulans 1.3   4 4
No Yes Drosophila sechellia 1.3   5 5
No Yes Drosophila melanogaster 76_5 Fruit fly 12 12
No Yes Drosophila erecta 1.3   4 4
No Yes Drosophila ananassae 1.3   5 5
No Yes Drosophila virilis 1.2   5 5
No Yes Drosophila mojavensis 1.3   5 5
No Yes Megaselia scalaris 22   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Anopheles darlingi 22 American malaria mosquito 2 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 4
No Yes Tribolium castaneum 3.0 Red flour beetle 4 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 3 3
No Yes Acyrthosiphon pisum Pea aphid 4 4
No Yes Rhodnius prolixus 22   4 4
No Yes Daphnia pulex Common water flea 3 3
No Yes Strigamia maritima 22   3 3
No Yes Sarcoptes scabiei   4 4
No Yes Tetranychus urticae Two-spotted spider mite 5 5
No Yes Ixodes scapularis (Preliminary) Black-legged tick 3 3
No Yes Pristionchus pacificus   115 115
No Yes Meloidogyne incognita Southern root-knot nematode 57 56
No Yes Meloidogyne hapla   10 10
No Yes Onchocerca volvulus 22   34 32
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 38 38
No Yes Caenorhabditis japonica   137 137
No Yes Caenorhabditis brenneri   82 82
No Yes Caenorhabditis remanei   123 120
No Yes Caenorhabditis elegans 76_235 Roundworm 120 120
No Yes Caenorhabditis briggsae 2   84 84
No Yes Trichinella spiralis 22   30 30
No Yes Hymenolepis microstoma   3 2
No Yes Echinococcus multilocularis   2 1
No Yes Echinococcus granulosus   2 1
No Yes Taenia solium Pork tapeworm 2 1
No Yes Schistosoma mansoni   25 13
No Yes Mnemiopsis leidyi Sea walnut 4 4
No Yes Thelohanellus kitauei   4 4
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 4 4
No Yes Hydra vulgaris   4 4
No Yes Amphimedon queenslandica   7 7
No Yes Trichoplax adhaerens   4 4
No Yes Proterospongia sp. ATCC 50818   3 3
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   3 3
No Yes Capsaspora owczarzaki ATCC 30864   4 4
No Yes Conidiobolus coronatus NRRL28638 v1.0   2 2
No Yes Mortierella verticillata NRRL 6337   4 4
No Yes Phycomyces blakesleeanus   3 3
No Yes Rhizopus oryzae RA 99-880   4 4
No Yes Mucor circinelloides   3 3
No Yes Rhizomucor miehei CAU432   3 3
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Rhodotorula graminis WP1 v1.0   1 1
No Yes Sporobolomyces roseus IAM 13481   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Serpula lacrymans var. lacrymans S7.9   1 1
No Yes Coniophora puteana   1 1
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Pisolithus microcarpus 441 v1.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   2 2
No Yes Scleroderma citrinum Foug A v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   3 3
No Yes Pleurotus ostreatus Oyster mushroom 4 3
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0   2 2
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Laccaria bicolor S238N-H82   2 2
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Schizophyllum commune   3 2
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Heterobasidion annosum   2 2
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Fomitopsis pinicolav1.0   1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   1 1
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Blumeria graminis 22   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   2 2
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   1 1
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida dubliniensis CD36   1 1
No Yes Candida albicans SC5314   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   1 1
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   2 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   2 2
No Yes Candida glabrata CBS138   2 2
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   2 2
No Yes Schizosaccharomyces octosporus yFS286   2 2
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 2 2
No Yes Catenaria anguillulae PL171 v1.0   6 5
No Yes Allomyces macrogynus ATCC 38327   12 12
No Yes Spizellomyces punctatus DAOM BR117   9 8
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   2 2
No Yes Entamoeba dispar 1.2   4 4
No Yes Entamoeba invadens 1.2   3 3
No Yes Entamoeba histolytica 1   4 4
No Yes Selaginella moellendorffii   14 14
No Yes Pinus taeda Loblolly pine 6 6
No Yes Picea abies Norway spruce 6 6
No Yes Eucalyptus grandis v201 Rose gum 24 24
No Yes Theobroma cacao B97-61/B2 v1 Cacao 11 11
No Yes Gossypium raimondii v221   80 80
No Yes Citrus clementina v165   23 23
No Yes Citrus sinensis v154 Sweet orange 45 44
No Yes Thellungiella halophila v173   12 12
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 20 20
No Yes Capsella rubella v183   8 8
No Yes Arabidopsis lyrata Lyrate rockcress 14 14
No Yes Arabidopsis thaliana 10 Thale cress 22 19
No Yes Carica papaya Papaya 12 12
No Yes Medicago truncatula Barrel medic 30 30
No Yes Phaseolus vulgaris v186 French bean 19 19
No Yes Glycine max v109 Soybean 38 38
No Yes Cucumis sativus v122 Cucumber 21 21
No Yes Fragaria vesca Wild strawberry 12 12
No Yes Malus domestica v196 Apple 21 20
No Yes Prunus persica v139 Peach 13 13
No Yes Linum usitatissimum v200 Flax 20 20
No Yes Manihot esculenta v147 Cassava 24 24
No Yes Populus trichocarpa v156 Black cottonwood 26 26
No Yes Vitis vinifera Wine grape 10 10
No Yes Mimulus guttatus v140 Spotted monkey flower 17 17
No Yes Solanum lycopersicum v.2.3 Tomato 18 18
No Yes Solanum tuberosum Potato 28 28
No Yes Actinidia chinensis Hongyang   19 19
No Yes Aquilegia coerulea v195   23 23
No Yes Triticum urartu 22   34 29
No Yes Triticum aestivum 22 Bread wheat 72 68
No Yes Aegilops tauschii 22   62 49
No Yes Brachypodium distachyon Stiff brome 29 29
No Yes Oryza barthii 22 African wild rice 24 22
No Yes Oryza meridionalis 22   22 21
No Yes Oryza glumaepatula 22   19 17
No Yes Oryza glaberrima African rice 17 17
No Yes Oryza punctata 22   24 24
No Yes Oryza nivara 22   23 23
No Yes Oryza brachyantha 22 Malo sina 15 15
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 29 29
No Yes Oryza sativa v193 Rice 27 27
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 17 17
No Yes Panicum virgatum v202 Switchgrass 49 49
No Yes Setaria italica v164 Foxtail millet 22 21
No Yes Zea mays subsp. mays Maize 38 38
No Yes Zea mays v181 Maize 43 43
No Yes Sorghum bicolor Sorghum 15 15
No Yes Musa balbisiana Balbis banana 21 19
No Yes Musa acuminata 22 Wild Malaysian banana 23 23
No Yes Amborella trichopoda 22   7 7
No Yes Physcomitrella patens   8 8
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 2
No Yes Chlorella variabilis sp. NC64A   2 2
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   3 3
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Porphyridium purpureum 02_2012   3 3
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   10 7
No Yes Giardia lamblia 2.3   2 2
No Yes Cyanophora paradoxa   3 3
No Yes Leishmania mexicana 2.4   4 4
No Yes Leishmania major strain Friedlin   5 5
No Yes Leishmania infantum JPCM5 2.4   5 5
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   4 4
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma cruzi strain CL Brener   2 2
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   5 5
No Yes Trypanosoma brucei TREU927 v4.1   4 4
No Yes Ectocarpus siliculosus   4 4
No Yes Aureococcus anophagefferens   2 2
No Yes Albugo laibachii 22   5 4
No Yes Pythium iwayamai DAOM BR242034 22   5 4
No Yes Pythium arrhenomanes ATCC 12531 22   3 3
No Yes Pythium ultimum v1.7-2   5 4
No Yes Pythium aphanidermatum DAOM BR444 22   5 4
No Yes Pythium irregulare DAOM BR486 22   5 4
No Yes Pythium vexans DAOM BR484 22   4 3
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 4 3
No Yes Phytophthora sojae 1.1   4 3
No Yes Phytophthora infestans T30-4   4 3
No Yes Phytophthora capsici   5 4
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   3 3
No Yes Perkinsus marinus ATCC 50983   6 6
No Yes Paramecium tetraurelia   38 38
No Yes Tetrahymena thermophila SB210 1   11 10
No Yes Ichthyophthirius multifiliis strain G5   7 6
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   2 2
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   5 5
No Yes Naegleria gruberi   3 3
No Yes Trichomonas vaginalis   15 12
No Yes Guillardia theta CCMP2712 v1.0   5 4
No Yes Emiliania huxleyi CCMP1516   6 6
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   2 2
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Deinococcus gobiensis I-0   2 2
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Chlorobium phaeovibrioides DSM 265   2 2
No Yes Chlorobium limicola DSM 245   1 1
No Yes Prosthecochloris aestuarii DSM 271   2 2
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Bacteroides sp. CF50   1 1
No Yes Gramella forsetii KT0803   1 1
No Yes Croceibacter atlanticus HTCC2559   2 2
No Yes Sphaerochaeta pleomorpha str. Grapes   1 1
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Spirochaeta africana DSM 8902   1 1
No Yes Persephonella marina EX-H1   1 1
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Terriglobus roseus DSM 18391   2 2
No Yes Acidithiobacillus ferrooxidans ATCC 53993   1 1
No Yes Bacteriovorax marinus SJ   2 2
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Pelobacter carbinolicus DSM 2380   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Azoarcus sp. KH32C   1 1
No Yes Laribacter hongkongensis HLHK9   1 1
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phytofirmans PsJN   2 2
No Yes Burkholderia xenovorans LB400   3 3
No Yes Ralstonia eutropha JMP134   2 2
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   5 5
No Yes Ralstonia eutropha H16   1 1
No Yes Ralstonia pickettii 12D   2 2
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia sp. RPE64   4 4
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   3 3
No Yes Burkholderia pseudomallei 1106a   6 6
No Yes Burkholderia mallei SAVP1   3 3
No Yes Burkholderia ambifaria AMMD   6 6
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia multivorans ATCC 17616   3 3
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   4 4
No Yes Burkholderia glumae BGR1   2 2
No Yes Ramlibacter tataouinensis TTB310   2 2
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   2 2
No Yes Polaromonas sp. JS666   2 2
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Collimonas fungivorans Ter331   3 3
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Advenella kashmirensis WT001   2 2
No Yes Bordetella petrii DSM 12804   3 3
No Yes Bordetella avium 197N   2 2
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   4 4
No Yes Achromobacter xylosoxidans   3 3
No Yes Gallionella capsiferriformans ES-2   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Parvularcula bermudensis HTCC2503   1 1
No Yes Phenylobacterium zucineum HLK1   1 1
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Novosphingobium sp. PP1Y   2 2
No Yes Novosphingobium aromaticivorans DSM 12444   2 2
No Yes Sphingobium japonicum UT26S   1 1
No Yes Hyphomonas neptunium ATCC 15444   2 2
No Yes Rhodospirillum centenum SW   1 1
No Yes Granulibacter bethesdensis CGDNIH1   1 1
No Yes Micavibrio aeruginosavorus ARL-13   1 1
No Yes Rickettsia bellii OSU 85-389   1 1
No Yes Rickettsia philipii str. 364D   1 1
No Yes Rickettsia heilongjiangensis 054   1 1
No Yes Rickettsia peacockii str. Rustic   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Rickettsia massiliae MTU5   1 1
No Yes Rickettsia japonica YH   1 1
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   1 1
No Yes Rickettsia montanensis str. OSU 85-930   1 1
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   1 1
No Yes Rickettsia australis str. Cutlack   1 1
No Yes Rickettsia rickettsii str. 'Sheila Smith'   1 1
No Yes Rickettsia conorii str. Malish 7   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   2 2
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   1 1
No Yes Hyphomicrobium denitrificans ATCC 51888   1 1
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Gallibacterium anatis UMN179   3 3
No Yes Haemophilus parasuis SH0165   1 1
No Yes Haemophilus ducreyi 35000HP   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   3 3
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   4 4
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   4 4
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio furnissii NCTC 11218   4 4
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Psychromonas ingrahamii 37   2 2
No Yes Ferrimonas balearica DSM 9799   2 2
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Shewanella putrefaciens CN-32   2 2
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   2 2
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Kangiella koreensis DSM 16069   1 1
No Yes Alcanivorax borkumensis SK2   2 2
No Yes Marinomonas sp. MWYL1   2 2
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Halomonas elongata DSM 2581   1 1
No Yes Methylococcus capsulatus str. Bath   1 1
No Yes Rhodanobacter denitrificans   1 1
No Yes Frateuria aurantia DSM 6220   2 2
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Stenotrophomonas maltophilia K279a   5 5
No Yes Xylella fastidiosa M23   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   2 2
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   2 2
No Yes Xanthomonas campestris pv. campestris str. B100   2 2
No Yes Alkalilimnicola ehrlichii MLHE-1   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Photorhabdus asymbiotica   7 7
No Yes Photorhabdus luminescens subsp. laumondii TTO1   15 15
No Yes Xenorhabdus bovienii SS-2004   4 4
No Yes Xenorhabdus nematophila ATCC 19061   2 2
No Yes Providencia stuartii MRSN 2154   36 36
No Yes Proteus mirabilis HI4320   18 18
No Yes Edwardsiella ictaluri 93-146   5 5
No Yes Edwardsiella tarda EIB202   5 5
No Yes Rahnella sp. Y9602   8 8
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   10 10
No Yes Yersinia pseudotuberculosis IP 31758   13 13
No Yes Yersinia pestis Pestoides F   14 14
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   13 13
No Yes Serratia sp. AS12   6 6
No Yes Serratia symbiotica str. 'Cinara cedri'   1 1
No Yes Serratia plymuthica AS9   6 6
No Yes Serratia proteamaculans 568   11 11
No Yes Pectobacterium wasabiae WPP163   2 2
No Yes Pectobacterium sp. SCC3193   5 5
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   3 3
No Yes Pantoea sp. At-9b   2 2
No Yes Pantoea vagans C9-1   7 7
No Yes Pantoea ananatis LMG 20103   8 8
No Yes Erwinia tasmaniensis Et1/99   15 15
No Yes Erwinia sp. Ejp617   3 3
No Yes Erwinia billingiae Eb661   6 6
No Yes Erwinia pyrifoliae Ep1/96   3 3
No Yes Erwinia amylovora ATCC 49946   3 3
No Yes Escherichia blattae DSM 4481   2 2
No Yes Cronobacter turicensis z3032   7 7
No Yes Cronobacter sakazakii ES15   10 10
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   2 2
No Yes Enterobacteriaceae bacterium strain FGI 57   16 16
No Yes Shigella sonnei Ss046   9 9
No Yes Shigella flexneri 5 str. 8401   8 8
No Yes Shigella dysenteriae Sd197   4 4
No Yes Shigella boydii CDC 3083-94   4 4
No Yes Salmonella bongori NCTC 12419   9 9
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   13 13
No Yes Klebsiella oxytoca E718   17 17
No Yes Klebsiella variicola At-22   12 12
No Yes Klebsiella pneumoniae NTUH-K2044   11 11
No Yes Enterobacter aerogenes KCTC 2190   14 14
No Yes Escherichia fergusonii ATCC 35469   8 8
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   11 11
No Yes Enterobacter sp. R4-368   5 5
No Yes Enterobacter sp. 638   6 6
No Yes Enterobacter asburiae LF7a   13 13
No Yes Enterobacter cloacae subsp. dissolvens SDM   13 13
No Yes Citrobacter rodentium ICC168   13 13
No Yes Citrobacter koseri ATCC BAA-895   17 17
No Yes Pseudomonas sp. TKP   6 6
No Yes Pseudomonas sp. UW4   3 3
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   2 2
No Yes Pseudomonas syringae pv. tomato str. DC3000   3 3
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   5 5
No Yes Pseudomonas protegens Pf-5   4 4
No Yes Pseudomonas fluorescens SBW25   5 5
No Yes Pseudomonas aeruginosa UCBPP-PA14   8 8
No Yes Pseudomonas sp. VLB120   4 4
No Yes Psychrobacter sp. G   1 1
No Yes Psychrobacter sp. PRwf-1   2 2
No Yes Psychrobacter cryohalolentis K5   1 1
No Yes Acinetobacter oleivorans DR1   4 4
No Yes Acinetobacter calcoaceticus PHEA-2   4 4
No Yes Acinetobacter baumannii ATCC 17978   3 3
No Yes Acinetobacter sp. ADP1   4 4
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 22 22
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 11 11
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 59 59
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 114 114
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Candida albicans WO-1   1 1
No Yes Saccharomyces cerevisiae UC5   2 2
No Yes Saccharomyces cerevisiae PW5   2 2
No Yes Saccharomyces cerevisiae FL100   2 2
No Yes Saccharomyces cerevisiae CLIB324   2 2
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   2 2
No Yes Saccharomyces cerevisiae T7   2 2
No Yes Saccharomyces cerevisiae FostersB   2 2
No Yes Saccharomyces cerevisiae FostersO   2 2
No Yes Saccharomyces cerevisiae VL3   2 2
No Yes Saccharomyces cerevisiae Vin13   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   2 2
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   2 2
No Yes Saccharomyces cerevisiae JAY291   2 2
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae YPS163   2 2
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   2 2
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Schizosaccharomyces pombe 972h-   2 2
No Yes Batrachochytrium dendrobatidis JEL423   2 2
No Yes Batrachochytrium dendrobatidis JAM81   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 11 11
No Yes Hordeum vulgare 22 Domesticated barley 40 40
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 25 23
No Yes Trypanosoma brucei Lister 427 v4.1   5 5
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   2 2
No Yes Cylindrospermum stagnale PCC 7417   2 2
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Psychroflexus torquis ATCC 700755   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Geobacter sp. M18   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Pandoraea pnomenusa 3kgm   1 1
No Yes Ralstonia pickettii 12J   2 2
No Yes Ralstonia solanacearum FQY_4   2 2
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum GMI1000   2 2
No Yes Burkholderia sp. YI23   3 3
No Yes Burkholderia sp. KJ006   2 2
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   5 5
No Yes Burkholderia pseudomallei NCTC 13179   5 5
No Yes Burkholderia pseudomallei BPC006   6 6
No Yes Burkholderia pseudomallei 1026b   6 6
No Yes Burkholderia pseudomallei MSHR346   4 4
No Yes Burkholderia pseudomallei 668   5 5
No Yes Burkholderia pseudomallei 1710b   6 6
No Yes Burkholderia pseudomallei K96243   6 6
No Yes Burkholderia mallei NCTC 10229   3 3
No Yes Burkholderia mallei NCTC 10247   3 3
No Yes Burkholderia mallei ATCC 23344   3 3
No Yes Burkholderia lata   3 3
No Yes Burkholderia ambifaria MC40-6   9 9
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   2 2
No Yes Burkholderia cenocepacia J2315   4 4
No Yes Burkholderia multivorans ATCC 17616   3 3
No Yes Burkholderia cepacia GG4   6 6
No Yes Variovorax paradoxus B4   2 2
No Yes Variovorax paradoxus EPS   2 2
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   4 4
No Yes Octadecabacter arcticus 238   1 1
No Yes Micavibrio aeruginosavorus EPB   1 1
No Yes Rickettsia bellii RML369-C   1 1
No Yes Rickettsia massiliae str. AZT80   1 1
No Yes Rickettsia rickettsii str. Arizona   1 1
No Yes Rickettsia rickettsii str. Brazil   1 1
No Yes Rickettsia rickettsii str. Hauke   1 1
No Yes Rickettsia rickettsii str. Colombia   1 1
No Yes Rickettsia rickettsii str. Hlp#2   1 1
No Yes Rickettsia rickettsii str. Hino   1 1
No Yes Rickettsia rickettsii str. Iowa   1 1
No Yes Sinorhizobium meliloti GR4   2 2
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Hyphomicrobium denitrificans 1NES1   1 1
No Yes Haemophilus parasuis ZJ0906   1 1
No Yes Haemophilus influenzae KR494   1 1
No Yes Haemophilus influenzae F3047   6 6
No Yes Haemophilus influenzae F3031   5 5
No Yes Haemophilus influenzae PittGG   1 1
No Yes Haemophilus influenzae R2866   1 1
No Yes Aeromonas hydrophila ML09-119   4 4
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Shewanella sp. W3-18-1   2 2
No Yes Shewanella baltica OS223   2 2
No Yes Shewanella sp. MR-7   2 2
No Yes Shewanella putrefaciens 200   2 2
No Yes Alcanivorax dieselolei B5   2 2
No Yes Stenotrophomonas maltophilia D457   5 5
No Yes Stenotrophomonas maltophilia JV3   7 7
No Yes Stenotrophomonas maltophilia R551-3   4 4
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   2 2
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   2 2
No Yes Xanthomonas axonopodis pv. citrumelo F1   2 2
No Yes Xanthomonas axonopodis Xac29-1   2 2
No Yes Xanthomonas oryzae pv. oryzicola BLS256   2 2
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   2 2
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   2 2
No Yes Xanthomonas campestris pv. raphani 756C   2 2
No Yes Xanthomonas campestris pv. campestris str. 8004   2 2
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   2 2
No Yes Proteus mirabilis BB2000   18 18
No Yes Morganella morganii subsp. morganii KT   9 9
No Yes Edwardsiella tarda C07-087   6 6
No Yes Edwardsiella tarda FL6-60   5 5
No Yes Rahnella aquatilis HX2   7 7
No Yes Yersinia pseudotuberculosis PB1/+   13 13
No Yes Yersinia pseudotuberculosis YPIII   13 13
No Yes Yersinia pseudotuberculosis IP 32953   12 12
No Yes Yersinia pestis biovar Microtus str. 91001   14 14
No Yes Yersinia pestis A1122   12 12
No Yes Yersinia pestis Z176003   11 11
No Yes Yersinia pestis D182038   14 14
No Yes Yersinia pestis D106004   14 14
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   11 11
No Yes Yersinia pestis Nepal516   12 12
No Yes Yersinia pestis Antiqua   14 14
No Yes Yersinia pestis Angola   12 12
No Yes Yersinia pestis CO92   14 14
No Yes Yersinia pestis KIM10+   14 14
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   12 12
No Yes Yersinia enterocolitica subsp. palearctica Y11   12 12
No Yes Serratia sp. AS13   6 6
No Yes Serratia plymuthica S13   7 7
No Yes Serratia plymuthica 4Rx13   7 7
No Yes Serratia marcescens FGI94   6 6
No Yes Serratia marcescens WW4   13 13
No Yes Serratia liquefaciens ATCC 27592   6 6
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Pantoea ananatis LMG 5342   10 10
No Yes Pantoea ananatis PA13   8 8
No Yes Pantoea ananatis AJ13355   10 10
No Yes Erwinia pyrifoliae DSM 12163   3 3
No Yes Erwinia amylovora CFBP1430   3 3
No Yes Cronobacter sakazakii CMCC 45402   7 7
No Yes Cronobacter sakazakii SP291   9 9
No Yes Cronobacter sakazakii ATCC BAA-894   9 9
No Yes Raoultella ornithinolytica B6   7 7
No Yes Shigella sonnei 53G   12 12
No Yes Shigella flexneri 2002017   7 7
No Yes Shigella flexneri 2a str. 2457T   6 6
No Yes Shigella flexneri 2a str. 301   5 5
No Yes Shigella dysenteriae 1617   4 4
No Yes Shigella boydii Sb227   6 6
No Yes Salmonella bongori N268-08   10 10
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   6 6
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   13 13
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   15 15
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   14 14
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   15 15
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   14 14
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   13 13
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   15 15
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   15 15
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   13 13
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   14 14
No Yes Salmonella enterica serovar Bovismorbificans genomics   14 14
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   19 19
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   15 15
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   15 15
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   12 12
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   14 14
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   14 14
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   14 14
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   15 15
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   15 15
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   15 15
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   15 15
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   11 11
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   11 11
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   11 11
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   15 15
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   12 12
No Yes Klebsiella oxytoca KCTC 1686   18 18
No Yes Klebsiella pneumoniae JM45   11 11
No Yes Klebsiella pneumoniae CG43   14 14
No Yes Klebsiella pneumoniae KCTC 2242   13 13
No Yes Klebsiella pneumoniae 342   12 12
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   11 11
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   9 9
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   16 16
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   9 9
No Yes Enterobacter aerogenes EA1509E   11 11
No Yes Escherichia coli E24377A   15 15
No Yes Escherichia coli E. coli PMV-1   11 11
No Yes Escherichia coli JJ1886   10 10
No Yes Escherichia coli LY180   15 15
No Yes Escherichia coli APEC O78   15 15
No Yes Escherichia coli O7:K1 str. CE10   14 14
No Yes Escherichia coli O104:H4 str. 2009EL-2050   15 15
No Yes Escherichia coli O104:H4 str. 2009EL-2071   15 15
No Yes Escherichia coli O104:H4 str. 2011C-3493   15 15
No Yes Escherichia coli NA114   8 8
No Yes Escherichia coli P12b   9 9
No Yes Escherichia coli str. 'clone D i2'   11 11
No Yes Escherichia coli str. 'clone D i14'   11 11
No Yes Escherichia coli UM146   13 13
No Yes Escherichia coli 042   13 13
No Yes Escherichia coli Xuzhou21   17 17
No Yes Escherichia coli IHE3034   11 11
No Yes Escherichia coli UMNK88   13 13
No Yes Escherichia coli O83:H1 str. NRG 857C   11 11
No Yes Escherichia coli ABU 83972   12 12
No Yes Escherichia coli KO11FL   17 17
No Yes Escherichia coli KO11FL   17 17
No Yes Escherichia coli LF82   11 11
No Yes Escherichia coli ED1a   10 10
No Yes Escherichia coli IAI39   14 14
No Yes Escherichia coli UMN026   14 14
No Yes Escherichia coli 55989   15 15
No Yes Escherichia coli S88   10 10
No Yes Escherichia coli IAI1   16 16
No Yes Escherichia coli W   17 17
No Yes Escherichia coli W   17 17
No Yes Escherichia coli DH1   13 13
No Yes Escherichia coli DH1   13 13
No Yes Escherichia coli ATCC 8739   12 12
No Yes Escherichia coli BL21(DE3)   11 11
No Yes Escherichia coli BL21(DE3)   11 11
No Yes Escherichia coli SMS-3-5   12 12
No Yes Escherichia coli SE15   10 10
No Yes Escherichia coli SE11   20 20
No Yes Escherichia coli APEC O1   11 11
No Yes Escherichia coli O103:H2 str. 12009   15 15
No Yes Escherichia coli UTI89   13 13
No Yes Escherichia coli 536   16 16
No Yes Escherichia coli HS   11 11
No Yes Escherichia coli ETEC H10407   12 12
No Yes Escherichia coli O55:H7 str. RM12579   16 16
No Yes Escherichia coli O55:H7 str. CB9615   16 16
No Yes Escherichia coli O26:H11 str. 11368   16 16
No Yes Escherichia coli CFT073   13 13
No Yes Escherichia coli O111:H- str. 11128   13 13
No Yes Escherichia coli O127:H6 str. E2348/69   6 6
No Yes Escherichia coli O157:H7 str. TW14359   17 17
No Yes Escherichia coli O157:H7 str. EC4115   15 15
No Yes Escherichia coli O157:H7 str. Sakai   17 17
No Yes Escherichia coli O157:H7 str. EDL933   17 17
No Yes Escherichia coli str. K-12 substr. MDS42   8 8
No Yes Escherichia coli BW2952   11 11
No Yes Escherichia coli str. K-12 substr. MG1655   13 13
No Yes Escherichia coli str. K-12 substr. W3110   13 13
No Yes Escherichia coli str. K-12 substr. DH10B   12 12
No Yes Escherichia coli B str. REL606   11 11
No Yes Enterobacter cloacae SCF1   16 16
No Yes Enterobacter cloacae EcWSU1   10 10
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   14 14
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   14 14
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   17 17
No Yes Pseudomonas denitrificans ATCC 13867   3 3
No Yes Pseudomonas syringae pv. phaseolicola 1448A   3 3
No Yes Pseudomonas syringae pv. syringae B728a   3 3
No Yes Pseudomonas monteilii SB3101   2 2
No Yes Pseudomonas monteilii SB3078   2 2
No Yes Pseudomonas putida H8234   2 2
No Yes Pseudomonas putida HB3267   2 2
No Yes Pseudomonas putida NBRC 14164   3 3
No Yes Pseudomonas putida DOT-T1E   5 5
No Yes Pseudomonas putida S16   2 2
No Yes Pseudomonas putida BIRD-1   4 4
No Yes Pseudomonas putida W619   2 2
No Yes Pseudomonas putida ND6   5 5
No Yes Pseudomonas putida KT2440   2 2
No Yes Pseudomonas putida GB-1   3 3
No Yes Pseudomonas protegens CHA0   4 4
No Yes Pseudomonas poae RE*1-1-14   7 7
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas fluorescens A506   9 9
No Yes Pseudomonas fluorescens R124   4 4
No Yes Pseudomonas fluorescens Pf0-1   3 3
No Yes Pseudomonas resinovorans NBRC 106553   3 3
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   6 6
No Yes Pseudomonas aeruginosa MTB-1   6 6
No Yes Pseudomonas aeruginosa LES431   7 7
No Yes Pseudomonas aeruginosa RP73   7 7
No Yes Pseudomonas aeruginosa B136-33   6 6
No Yes Pseudomonas aeruginosa PA1R   5 5
No Yes Pseudomonas aeruginosa PA1   6 6
No Yes Pseudomonas aeruginosa DK2   7 7
No Yes Pseudomonas aeruginosa NCGM2.S1   5 5
No Yes Pseudomonas aeruginosa M18   7 7
No Yes Pseudomonas aeruginosa LESB58   7 7
No Yes Pseudomonas aeruginosa PA7   6 6
No Yes Pseudomonas aeruginosa PAO1   7 7
No Yes Acinetobacter genomosp. 13TU RUH2624   6 6
No Yes Acinetobacter sp. SH024   5 5
No Yes Acinetobacter calcoaceticus ruh2202   4 4
No Yes Acinetobacter baumannii ZW85-1   4 4
No Yes Acinetobacter baumannii TYTH-1   3 3
No Yes Acinetobacter baumannii BJAB0868   3 3
No Yes Acinetobacter baumannii BJAB0715   4 4
No Yes Acinetobacter baumannii BJAB07104   3 3
No Yes Acinetobacter baumannii TCDC-AB0715   4 4
No Yes Acinetobacter baumannii D1279779   3 3
No Yes Acinetobacter baumannii MDR-TJ   3 3
No Yes Acinetobacter baumannii 1656-2   3 3
No Yes Acinetobacter baumannii ATCC 19606   4 4
No Yes Acinetobacter baumannii AB307-0294   4 4
No Yes Acinetobacter baumannii AYE   4 4
No Yes Acinetobacter baumannii MDR-ZJ06   2 2
No Yes Acinetobacter baumannii AB0057   4 4
No Yes Acinetobacter baumannii ACICU   3 3
No Yes Acinetobacter junii SH205   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Methanococcus maripaludis C6   1 1
No Yes Methanococcus maripaludis C7   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 22 22
No Yes Homo sapiens (NCBI version) Human 13 13
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 7 7
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 31 31
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 23 23
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 27 26
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 3 3
No Yes Lotus japonicus (Early assembly)   15 15
No Yes Malus x domestica (Duplicate) Apple 21 20
No Yes Ricinus communis (Early assembly) Castor bean 15 15
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   28 28
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 18 18
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 18 18
No Yes Phoenix dactylifera (Early draft) Date palm 12 11
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   4 4
No Yes Homo sapiens 69_37 Human 6 6
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 7 7
No Yes Gorilla gorilla 69_3.1 Western gorilla 6 6
No Yes Pongo abelii 69_2 Sumatran orangutan 5 5
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 5 5
No Yes Macaca mulatta 69_1 Rhesus monkey 8 8
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 5 5
No Yes Otolemur garnettii 69_3 Small-eared galago 8 8
No Yes Microcebus murinus 69_1 Gray mouse lemur 5 5
No Yes Rattus norvegicus 69_3.4 Norway rat 8 8
No Yes Mus musculus 69_38 House mouse 7 7
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 5 5
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 5 5
No Yes Cavia porcellus 69_3 Domestic guinea pig 6 6
No Yes Oryctolagus cuniculus 69_2 Rabbit 6 6
No Yes Ochotona princeps 69 American pika 4 4
No Yes Tupaia belangeri 69 Northern tree shrew 6 6
No Yes Sus scrofa 69_10.2 Pig 7 7
No Yes Bos taurus 69_3.1 Cattle 7 7
No Yes Vicugna pacos 69_1 Alpaca 5 5
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 5 5
No Yes Mustela putorius furo 69_1.0 Domestic ferret 5 5
No Yes Ailuropoda melanoleuca 69_1 Giant panda 5 5
No Yes Canis familiaris 69_3.1 Dog 6 6
No Yes Felis catus 69 Domestic cat 5 5
No Yes Equus caballus 69_2 Horse 6 6
No Yes Myotis lucifugus 69_2.0 Little brown bat 8 7
No Yes Pteropus vampyrus 69_1 Large flying fox 6 6
No Yes Sorex araneus 69_1 European shrew 4 4
No Yes Erinaceus europaeus 69 Western European hedgehog 7 7
No Yes Procavia capensis 69_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 69_3 African savanna elephant 7 7
No Yes Echinops telfairi 69 Small Madagascar hedgehog 6 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 4 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 4 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 4 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 8 8
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 7 7
No Yes Ornithorhynchus anatinus 69_5 Platypus 5 5
No Yes Petromyzon marinus 69_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 69_2 Turkey 4 4
No Yes Gallus gallus 69_2 Chicken 4 4
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 7 7
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 4 4
No Yes Anolis carolinensis 69_2.0 Green anole 7 7
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 7 7
No Yes Latimeria chalumnae 69_1 Coelacanth 5 5
No Yes Gadus morhua 69_1 Atlantic cod 5 5
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 5 5
No Yes Takifugu rubripes 69_4 Torafugu 7 7
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 5 5
No Yes Oryzias latipes 69_1 Japanese medaka 5 5
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 5 5
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 7 7
No Yes Danio rerio 69_9 Zebrafish 5 5
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 69 Vase tunicate 5 5
No Yes Drosophila melanogaster 69_5 Fruit fly 5 5
No Yes Caenorhabditis elegans 69_215 Roundworm 115 115
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes Arabidopsis thaliana 10 Thale cress 11 10
No Yes 1_050719N (meta-genome)   4 4
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   3 3
No Yes 4_050719Q (meta-genome)   10 10
No Yes 5_050719P (meta-genome)   13 13
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   5 5
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   7 7
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   102 102
No Yes Combined (meta-genome)   183 183
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   151 151
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   42 42
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   42 42
No Yes Dump bottom (Dump bottom) (meta-genome)   14 14
No Yes Dump top (Dump top) (meta-genome)   8 8
No Yes Endophytic microbiome from Rice (meta-genome)   14 14
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   3 3
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   93 93
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   215 215
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   255 255
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   12 12
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   8 8
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   3 3
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   2 2
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   25 25
No Yes NCBI 2017_08 genome   330020 329894
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   7 7
No Yes Protozoadb 2010_08 (Protozoadb)   98 92
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   11 11
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   9 9
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   7 7
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   3 3
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   2332 2316
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   5 5
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   22 22
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   30049 29731
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   57 56
No Yes NCBI plasmid sequences (Plasmids)   115 115
No Yes PDB chains (SCOP 1.75) (PDB)   17 17
No Yes Protein Data Bank (all PDB sequenc)   161 161
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   401 401
No Yes TargetDB (Targets)   131 131
No Yes The Salmonella enterica Pan-genome (meta-genome)   424 424

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