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Bacterial adhesins superfamily domain assignments
in
Clostridium perfringens ATCC 13124

Assignment details

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Clostridium perfringens ATCC 13124 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|110799180|ref|YP_694610.1|   1.89e-16   196-329   Collagen-binding domain of adhesin  
  0.000000000000708   43-158   Fibrinogen-binding domain  
 
Weak hits:
gi|110799961|ref|YP_695222.1|   0.000229   233-340   Collagen-binding domain of adhesin  

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Select to display   Genome       Domains   Proteins
No Yes ALL   979459 979459
No Yes Capitella sp. I   2 2
No Yes Rhodnius prolixus 22   2 2
No Yes Caenorhabditis remanei   1 1
No Yes Thelohanellus kitauei   13 13
No Yes Amphimedon queenslandica   2 2
No Yes Aspergillus zonatus v1.0   10 4
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   11 11
No Yes Candida dubliniensis CD36   7 7
No Yes Candida tropicalis MYA-3404   13 13
No Yes Candida parapsilosis   5 5
No Yes Candida albicans SC5314   10 10
No Yes Lodderomyces elongisporus NRRL YB-4239   5 5
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   2 2
No Yes Pichia stipitis CBS 6054   2 2
No Yes Candida guilliermondii ATCC 6260   3 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   2 2
No Yes Wickerhamomyces anomalus   3 3
No Yes Yarrowia lipolytica CLIB122   9 9
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   3 3
No Yes Lachancea kluyveri   3 3
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phytophthora capsici   4 2
No Yes Rivularia sp. PCC 7116   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Cryptobacterium curtum DSM 15641   7 5
No Yes Eggerthella sp. YY7918   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Slackia heliotrinireducens DSM 20476   3 2
No Yes Olsenella uli DSM 7084   5 3
No Yes Atopobium parvulum DSM 20469   5 3
No Yes Ilumatobacter coccineus   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Propionibacterium propionicum F0230a   3 2
No Yes Actinoplanes sp. N902-109   1 1
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus erythropolis PR4   7 2
No Yes Corynebacterium resistens DSM 45100   1 1
No Yes Corynebacterium ulcerans 0102   7 6
No Yes Corynebacterium pseudotuberculosis 316   2 2
No Yes Corynebacterium diphtheriae NCTC 13129   3 2
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Bifidobacterium dentium Bd1   3 2
No Yes Bifidobacterium bifidum S17   1 1
No Yes Actinomyces sp. F0330   5 4
No Yes Anaerolinea thermophila UNI-1   2 1
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Anaerococcus prevotii DSM 20548   2 2
No Yes Finegoldia magna ATCC 29328   4 3
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   4 2
No Yes Ethanoligenens harbinense YUAN-3   5 1
No Yes Faecalibacterium prausnitzii   2 1
No Yes Eubacterium limosum KIST612   10 5
No Yes Clostridium difficile 630   2 1
No Yes Filifactor alocis ATCC 35896   6 3
No Yes Clostridium saccharolyticum WM1   3 1
No Yes Clostridium phytofermentans ISDg   7 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Butyrivibrio proteoclasticus B316   2 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Clostridium novyi NT   2 1
No Yes Clostridium tetani E88   2 1
No Yes Clostridium perfringens ATCC 13124   2 1
No Yes Clostridium cellulovorans 743B   6 1
No Yes Halanaerobium hydrogeniformans   3 1
No Yes Carnobacterium sp. 17-4   7 1
No Yes Aerococcus urinae ACS-120-V-Col10a   4 2
No Yes Melissococcus plutonius DAT561   1 1
No Yes Enterococcus sp. 7L76   8 2
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   2 1
No Yes Enterococcus faecalis 62   13 5
No Yes Weissella koreensis KACC 15510   3 2
No Yes Oenococcus oeni PSU-1   5 2
No Yes Leuconostoc gasicomitatum LMG 18811   2 1
No Yes Lactobacillus casei ATCC 334   4 2
No Yes Lactobacillus kefiranofaciens ZW3   2 1
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus salivarius CECT 5713   4 3
No Yes Lactobacillus ruminis ATCC 27782   5 1
No Yes Lactobacillus amylovorus GRL1118   2 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus reuteri DSM 20016   2 1
No Yes Lactobacillus gasseri ATCC 33323   1 1
No Yes Lactobacillus plantarum JDM1   7 4
No Yes Lactobacillus helveticus DPC 4571   2 1
No Yes Lactobacillus buchneri NRRL B-30929   3 2
No Yes Lactobacillus buchneri   1 1
No Yes Lactobacillus brevis ATCC 367   6 3
No Yes Lactobacillus acidophilus 30SC   2 1
No Yes Pediococcus claussenii ATCC BAA-344   3 2
No Yes Pediococcus pentosaceus ATCC 25745   3 2
No Yes Lactococcus garvieae ATCC 49156   2 1
No Yes Lactococcus lactis subsp. cremoris MG1363   2 1
No Yes Streptococcus sp. I-P16   11 6
No Yes Streptococcus sp. I-G2   10 5
No Yes Streptococcus intermedius JTH08   6 3
No Yes Streptococcus gallolyticus UCN34   4 2
No Yes Streptococcus equi subsp. equi 4047   2 1
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   4 1
No Yes Streptococcus parasanguinis ATCC 15912   5 3
No Yes Streptococcus agalactiae A909   2 1
No Yes Streptococcus mutans NN2025   2 1
No Yes Streptococcus sanguinis SK36   12 6
No Yes Streptococcus salivarius 57.I   4 2
No Yes Streptococcus oralis Uo5   9 5
No Yes Streptococcus gordonii str. Challis substr. CH1   8 4
No Yes Exiguobacterium sp. AT1b   6 1
No Yes Brevibacillus brevis NBRC 100599   6 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   9 2
No Yes Paenibacillus polymyxa M1   9 2
No Yes Bacillus selenitireducens MLS10   6 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   16 4
No Yes Listeria innocua Clip11262   18 5
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   22 5
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   16 4
No Yes Listeria ivanovii subsp. ivanovii PAM 55   14 3
No Yes Lysinibacillus sphaericus C3-41   4 1
No Yes Bacillus sp. JS   16 2
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   7 1
No Yes Bacillus halodurans C-125   14 2
No Yes Bacillus weihenstephanensis KBAB4   5 3
No Yes Bacillus thuringiensis str. Al Hakam   29 7
No Yes Bacillus cereus 03BB102   26 6
No Yes Bacillus anthracis str. A0248   15 3
No Yes Bacillus clausii KSM-K16   15 1
No Yes Bacillus pumilus SAFR-032   6 1
No Yes Macrococcus caseolyticus JCSC5402   2 1
No Yes Staphylococcus pseudintermedius HKU10-03   6 3
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   2 1
No Yes Staphylococcus lugdunensis HKU09-01   4 2
No Yes Staphylococcus haemolyticus JCSC1435   4 3
No Yes Staphylococcus epidermidis RP62A   2 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   2 1
No Yes Staphylococcus aureus subsp. aureus JH1   14 7
No Yes Staphylococcus aureus   12 6
No Yes Coraliomargarita akajimensis DSM 45221   4 1
No Yes Caldisericum exile AZM16c01   1 1
No Yes candidate division WWE3 bacterium RAAC2_WWE3_1   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Sorangium cellulosum 'So ce 56'   2 2
No Yes Chromobacterium violaceum ATCC 12472   2 2
No Yes Burkholderia phytofirmans PsJN   2 2
No Yes Burkholderia xenovorans LB400   5 5
No Yes Ralstonia eutropha JMP134   4 4
No Yes Cupriavidus taiwanensis LMG 19424   2 2
No Yes Cupriavidus metallidurans CH34   10 10
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   4 4
No Yes Ralstonia pickettii 12D   5 5
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia sp. RPE64   7 7
No Yes Burkholderia sp. CCGE1002   3 3
No Yes Burkholderia thailandensis E264   5 5
No Yes Burkholderia pseudomallei 1106a   8 8
No Yes Burkholderia mallei SAVP1   3 3
No Yes Burkholderia ambifaria AMMD   6 6
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia vietnamiensis G4   2 2
No Yes Burkholderia gladioli BSR3   8 8
No Yes Burkholderia glumae BGR1   6 6
No Yes Delftia sp. Cs1-4   5 5
No Yes Delftia acidovorans SPH-1   7 7
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Comamonas testosteroni CNB-2   3 3
No Yes Collimonas fungivorans Ter331   4 4
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Advenella kashmirensis WT001   2 2
No Yes Bordetella petrii DSM 12804   7 7
No Yes Bordetella avium 197N   13 13
No Yes Bordetella pertussis Tohama I   4 4
No Yes Bordetella parapertussis 12822   5 5
No Yes Bordetella bronchiseptica RB50   7 7
No Yes Achromobacter xylosoxidans A8   4 4
No Yes Achromobacter xylosoxidans   3 3
No Yes Gallibacterium anatis UMN179   6 6
No Yes Haemophilus ducreyi 35000HP   3 3
No Yes Aeromonas veronii B565   3 3
No Yes Aeromonas salmonicida subsp. salmonicida A449   3 3
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   3 3
No Yes Vibrio harveyi ATCC BAA-1116   2 2
No Yes Vibrio furnissii NCTC 11218   9 9
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella sp. MR-4   4 4
No Yes Shewanella putrefaciens CN-32   2 2
No Yes Alcanivorax borkumensis SK2   2 2
No Yes Frateuria aurantia DSM 6220   4 4
No Yes Pseudoxanthomonas suwonensis 11-1   2 2
No Yes Stenotrophomonas maltophilia K279a   5 5
No Yes Xylella fastidiosa M23   3 2
No Yes Photorhabdus asymbiotica   16 16
No Yes Photorhabdus luminescens subsp. laumondii TTO1   24 24
No Yes Xenorhabdus bovienii SS-2004   8 8
No Yes Xenorhabdus nematophila ATCC 19061   3 3
No Yes Providencia stuartii MRSN 2154   89 88
No Yes Proteus mirabilis HI4320   55 53
No Yes Edwardsiella ictaluri 93-146   4 4
No Yes Edwardsiella tarda EIB202   9 9
No Yes Rahnella sp. Y9602   18 18
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   21 21
No Yes Yersinia pseudotuberculosis IP 31758   14 14
No Yes Yersinia pestis Pestoides F   13 13
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   15 15
No Yes Serratia sp. AS12   22 21
No Yes Serratia symbiotica str. 'Cinara cedri'   2 2
No Yes Serratia plymuthica AS9   22 21
No Yes Serratia proteamaculans 568   32 32
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   6 6
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   5 5
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   12 12
No Yes Pantoea ananatis LMG 20103   12 10
No Yes Erwinia tasmaniensis Et1/99   35 33
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia billingiae Eb661   8 8
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Escherichia blattae DSM 4481   5 5
No Yes Cronobacter turicensis z3032   23 23
No Yes Cronobacter sakazakii ES15   26 26
No Yes Enterobacteriaceae bacterium strain FGI 57   35 35
No Yes Shigella sonnei Ss046   24 23
No Yes Shigella flexneri 5 str. 8401   25 23
No Yes Shigella dysenteriae Sd197   13 12
No Yes Shigella boydii CDC 3083-94   17 16
No Yes Salmonella bongori NCTC 12419   28 28
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   35 35
No Yes Klebsiella oxytoca E718   46 45
No Yes Klebsiella variicola At-22   26 25
No Yes Klebsiella pneumoniae NTUH-K2044   24 23
No Yes Enterobacter aerogenes KCTC 2190   31 29
No Yes Escherichia fergusonii ATCC 35469   19 19
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   34 32
No Yes Enterobacter sp. R4-368   5 5
No Yes Enterobacter sp. 638   28 28
No Yes Enterobacter asburiae LF7a   27 26
No Yes Enterobacter cloacae subsp. dissolvens SDM   25 25
No Yes Citrobacter rodentium ICC168   28 27
No Yes Citrobacter koseri ATCC BAA-895   38 36
No Yes Pseudomonas sp. TKP   11 11
No Yes Pseudomonas syringae pv. tomato str. DC3000   4 4
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   4 4
No Yes Pseudomonas protegens Pf-5   5 5
No Yes Pseudomonas fluorescens SBW25   12 12
No Yes Pseudomonas aeruginosa UCBPP-PA14   9 9
No Yes Pseudomonas sp. VLB120   5 5
No Yes Psychrobacter sp. PRwf-1   2 2
No Yes Acinetobacter oleivorans DR1   4 4
No Yes Acinetobacter calcoaceticus PHEA-2   4 4
No Yes Acinetobacter baumannii ATCC 17978   3 3
No Yes Acinetobacter sp. ADP1   4 4
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanobrevibacter sp. AbM4   1 1
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Candida albicans WO-1   4 4
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 11 9
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Rhodococcus erythropolis CCM2595   2 2
No Yes Corynebacterium ulcerans BR-AD22   8 7
No Yes Corynebacterium ulcerans 809   7 6
No Yes Corynebacterium pseudotuberculosis 258   3 3
No Yes Corynebacterium pseudotuberculosis Cp162   3 3
No Yes Corynebacterium pseudotuberculosis P54B96   8 7
No Yes Corynebacterium pseudotuberculosis 267   8 7
No Yes Corynebacterium pseudotuberculosis 1/06-A   2 2
No Yes Corynebacterium pseudotuberculosis 42/02-A   6 5
No Yes Corynebacterium pseudotuberculosis 3/99-5   6 5
No Yes Corynebacterium pseudotuberculosis 31   2 2
No Yes Corynebacterium pseudotuberculosis CIP 52.97   4 4
No Yes Corynebacterium pseudotuberculosis PAT10   7 6
No Yes Corynebacterium pseudotuberculosis I19   8 7
No Yes Corynebacterium pseudotuberculosis FRC41   9 8
No Yes Corynebacterium pseudotuberculosis C231   8 7
No Yes Corynebacterium pseudotuberculosis 1002   8 7
No Yes Corynebacterium diphtheriae BH8   1 1
No Yes Corynebacterium diphtheriae INCA 402   3 2
No Yes Corynebacterium diphtheriae VA01   2 2
No Yes Corynebacterium diphtheriae HC04   3 2
No Yes Corynebacterium diphtheriae HC03   3 2
No Yes Corynebacterium diphtheriae HC02   3 2
No Yes Corynebacterium diphtheriae HC01   3 2
No Yes Corynebacterium diphtheriae 241   3 2
No Yes Corynebacterium diphtheriae CDCE 8392   1 1
No Yes Corynebacterium diphtheriae PW8   1 1
No Yes Corynebacterium diphtheriae C7 (beta)   3 2
No Yes Corynebacterium diphtheriae 31A   3 2
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. longum KACC 91563   1 1
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   1 1
No Yes Bifidobacterium bifidum PRL2010   1 1
No Yes Bifidobacterium bifidum BGN4   1 1
No Yes Actinomyces odontolyticus ATCC 17982   4 3
No Yes Actinomyces viscosus C505   2 2
No Yes Thermus oshimai JL-2   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   4 2
No Yes Clostridium acidurici 9a   7 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium difficile BI1   2 1
No Yes Clostridium difficile R20291   2 1
No Yes Clostridium difficile CD196   2 1
No Yes Clostridium sp. SY8519   4 3
No Yes Clostridium tetani genome 12124569   2 1
No Yes Clostridium perfringens SM101   2 1
No Yes Clostridium perfringens str. 13   2 1
No Yes Clostridium botulinum BKT015925   5 3
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Carnobacterium maltaromaticum LMA28   10 4
No Yes Melissococcus plutonius ATCC 35311   1 1
No Yes Enterococcus casseliflavus EC20   8 3
No Yes Enterococcus faecium Aus0085   2 1
No Yes Enterococcus faecium NRRL B-2354   2 1
No Yes Enterococcus faecium DO   2 1
No Yes Enterococcus faecalis str. Symbioflor 1   11 4
No Yes Enterococcus faecalis D32   12 5
No Yes Enterococcus faecalis OG1RF   19 5
No Yes Enterococcus faecalis V583   15 4
No Yes Leuconostoc gelidum JB7   2 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   4 2
No Yes Lactobacillus casei LOCK919   3 2
No Yes Lactobacillus casei W56   11 4
No Yes Lactobacillus casei LC2W   10 3
No Yes Lactobacillus casei BD-II   10 3
No Yes Lactobacillus casei BL23   4 2
No Yes Lactobacillus casei str. Zhang   5 3
No Yes Lactobacillus rhamnosus LOCK900   2 1
No Yes Lactobacillus salivarius UCC118   1 1
No Yes Lactobacillus amylovorus GRL 1112   2 1
No Yes Lactobacillus reuteri I5007   2 1
No Yes Lactobacillus reuteri JCM 1112   2 1
No Yes Lactobacillus reuteri SD2112   2 1
No Yes Lactobacillus plantarum 16   7 4
No Yes Lactobacillus plantarum ZJ316   7 4
No Yes Lactobacillus plantarum subsp. plantarum ST-III   7 4
No Yes Lactobacillus plantarum subsp. plantarum P-8   5 3
No Yes Lactobacillus plantarum WCFS1   7 4
No Yes Lactobacillus helveticus R0052   2 1
No Yes Lactobacillus helveticus H10   2 1
No Yes Lactobacillus helveticus CNRZ32   2 1
No Yes Lactobacillus brevis KB290   6 3
No Yes Lactobacillus acidophilus La-14   1 1
No Yes Lactobacillus acidophilus NCFM   1 1
No Yes Pediococcus pentosaceus SL4   3 2
No Yes Lactococcus garvieae Lg2   2 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   8 2
No Yes Lactococcus lactis subsp. lactis IO-1   8 2
No Yes Lactococcus lactis subsp. lactis CV56   8 2
No Yes Lactococcus lactis subsp. lactis Il1403   8 2
No Yes Lactococcus lactis subsp. cremoris KW2   6 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   6 1
No Yes Lactococcus lactis subsp. cremoris A76   6 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   2 1
No Yes Lactococcus lactis subsp. cremoris SK11   6 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   3 2
No Yes Streptococcus constellatus subsp. pharyngis C818   3 2
No Yes Streptococcus constellatus subsp. pharyngis C232   3 2
No Yes Streptococcus intermedius B196   4 2
No Yes Streptococcus intermedius C270   4 2
No Yes Streptococcus anginosus C238   2 1
No Yes Streptococcus anginosus C1051   2 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   4 2
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   4 2
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   4 2
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   5 3
No Yes Streptococcus equi subsp. zooepidemicus   5 2
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   4 1
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   6 2
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   6 2
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   6 2
No Yes Streptococcus iniae SF1   2 1
No Yes Streptococcus parasanguinis FW213   5 3
No Yes Streptococcus pyogenes MGAS1882   2 1
No Yes Streptococcus pyogenes MGAS15252   2 1
No Yes Streptococcus pyogenes MGAS10750   3 1
No Yes Streptococcus pyogenes MGAS10270   4 1
No Yes Streptococcus pyogenes MGAS2096   2 1
No Yes Streptococcus pyogenes MGAS9429   2 1
No Yes Streptococcus pyogenes MGAS6180   2 1
No Yes Streptococcus pyogenes NZ131   2 1
No Yes Streptococcus agalactiae ILRI112   2 1
No Yes Streptococcus agalactiae ILRI005   2 1
No Yes Streptococcus agalactiae 09mas018883   2 1
No Yes Streptococcus agalactiae 2-22   2 1
No Yes Streptococcus agalactiae SA20-06   2 1
No Yes Streptococcus agalactiae GD201008-001   2 1
No Yes Streptococcus agalactiae NEM316   2 1
No Yes Streptococcus agalactiae 2603V/R   2 1
No Yes Streptococcus mutans GS-5   2 1
No Yes Streptococcus mutans LJ23   6 3
No Yes Streptococcus mutans UA159   2 1
No Yes Streptococcus suis T15   4 2
No Yes Streptococcus suis TL13   2 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis ST3   3 2
No Yes Streptococcus suis D9   1 1
No Yes Streptococcus suis D12   2 1
No Yes Streptococcus suis ST1   2 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Streptococcus salivarius CCHSS3   2 1
No Yes Streptococcus salivarius JIM8777   4 2
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus polymyxa CR1   9 2
No Yes Paenibacillus polymyxa SC2   9 2
No Yes Paenibacillus polymyxa E681   6 2
No Yes Listeria monocytogenes EGD sequence   18 5
No Yes Listeria monocytogenes N53-1   17 6
No Yes Listeria monocytogenes La111   17 6
No Yes Listeria monocytogenes serotype 4b str. LL195   18 5
No Yes Listeria monocytogenes 07PF0776   18 5
No Yes Listeria monocytogenes M7   18 5
No Yes Listeria monocytogenes J1-220   18 5
No Yes Listeria monocytogenes J1816   18 5
No Yes Listeria monocytogenes SLCC2376   25 7
No Yes Listeria monocytogenes SLCC5850   18 5
No Yes Listeria monocytogenes ATCC 19117   18 5
No Yes Listeria monocytogenes L312   18 5
No Yes Listeria monocytogenes SLCC2479   18 5
No Yes Listeria monocytogenes SLCC7179   18 5
No Yes Listeria monocytogenes SLCC2540   18 5
No Yes Listeria monocytogenes SLCC2378   18 5
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   18 5
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   18 5
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   18 5
No Yes Listeria monocytogenes 08-5578   18 5
No Yes Listeria monocytogenes 08-5923   18 5
No Yes Listeria monocytogenes L99   18 5
No Yes Listeria monocytogenes HCC23   18 5
No Yes Listeria monocytogenes 10403S   18 5
No Yes Listeria monocytogenes J0161   18 5
No Yes Listeria monocytogenes Finland 1998   18 5
No Yes Listeria monocytogenes FSL R2-561   18 5
No Yes Listeria monocytogenes serotype 4b str. F2365   18 5
No Yes Listeria monocytogenes EGD-e   18 5
No Yes Amphibacillus xylanus NBRC 15112   6 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   7 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   7 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   7 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   7 1
No Yes Bacillus amyloliquefaciens LFB112   7 1
No Yes Bacillus amyloliquefaciens IT-45   7 1
No Yes Bacillus amyloliquefaciens XH7   7 1
No Yes Bacillus amyloliquefaciens LL3   7 1
No Yes Bacillus amyloliquefaciens TA208   7 1
No Yes Bacillus amyloliquefaciens DSM 7   7 1
No Yes Bacillus licheniformis 9945A   7 1
No Yes Bacillus subtilis XF-1   7 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   7 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   7 2
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   7 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   7 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   7 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   7 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   5 2
No Yes Bacillus toyonensis BCT-7112   8 3
No Yes Bacillus thuringiensis HD-771   13 3
No Yes Bacillus thuringiensis HD-789   16 4
No Yes Bacillus thuringiensis MC28   13 4
No Yes Bacillus thuringiensis serovar chinensis CT-43   14 4
No Yes Bacillus thuringiensis YBT-1518   16 6
No Yes Bacillus thuringiensis Bt407   17 7
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   27 5
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   18 6
No Yes Bacillus thuringiensis BMB171   20 5
No Yes Bacillus thuringiensis serovar finitimus YBT-020   18 5
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   16 5
No Yes Bacillus cereus FRI-35   21 6
No Yes Bacillus cereus biovar anthracis str. CI   25 4
No Yes Bacillus cereus AH820   22 5
No Yes Bacillus cereus AH187   30 10
No Yes Bacillus cereus B4264   15 5
No Yes Bacillus cereus G9842   16 4
No Yes Bacillus cereus Q1   29 8
No Yes Bacillus cereus F837/76   25 6
No Yes Bacillus cereus NC7401   30 10
No Yes Bacillus cereus E33L   25 5
No Yes Bacillus cereus ATCC 14579   14 6
No Yes Bacillus cereus ATCC 10987   26 6
No Yes Bacillus anthracis str. H9401   21 5
No Yes Bacillus anthracis str. CDC 684   23 6
No Yes Bacillus anthracis str. 'Ames Ancestor'   9 2
No Yes Bacillus anthracis str. Sterne   16 4
No Yes Bacillus anthracis str. Ames   15 3
No Yes Staphylococcus aureus subsp. aureus MSHR1132   14 7
No Yes Staphylococcus pseudintermedius ED99   8 4
No Yes Staphylococcus pasteuri SP1   2 1
No Yes Staphylococcus lugdunensis N920143   4 2
No Yes Staphylococcus warneri SG1   4 2
No Yes Staphylococcus epidermidis ATCC 12228   4 2
No Yes Staphylococcus aureus CA-347   16 8
No Yes Staphylococcus aureus Bmb9393   16 8
No Yes Staphylococcus aureus M1   12 6
No Yes Staphylococcus aureus 08BA02176   17 9
No Yes Staphylococcus aureus ST228/18412   12 6
No Yes Staphylococcus aureus ST228/18341   12 6
No Yes Staphylococcus aureus ST228/16125   12 6
No Yes Staphylococcus aureus ST228/16035   12 6
No Yes Staphylococcus aureus ST228/15532   12 6
No Yes Staphylococcus aureus ST228/10497   12 6
No Yes Staphylococcus aureus ST228/10388   12 6
No Yes Staphylococcus aureus 04-02981   14 7
No Yes Staphylococcus aureus RF122   8 4
No Yes Staphylococcus aureus subsp. aureus Z172   14 7
No Yes Staphylococcus aureus subsp. aureus 6850   12 6
No Yes Staphylococcus aureus subsp. aureus SA957   10 5
No Yes Staphylococcus aureus subsp. aureus CN1   14 7
No Yes Staphylococcus aureus subsp. aureus SA40   12 6
No Yes Staphylococcus aureus subsp. aureus 11819-97   14 7
No Yes Staphylococcus aureus subsp. aureus M013   14 8
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   14 7
No Yes Staphylococcus aureus subsp. aureus VC40   12 6
No Yes Staphylococcus aureus subsp. aureus T0131   14 7
No Yes Staphylococcus aureus subsp. aureus LGA251   14 7
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   14 7
No Yes Staphylococcus aureus subsp. aureus JKD6159   12 6
No Yes Staphylococcus aureus subsp. aureus ED133   14 7
No Yes Staphylococcus aureus subsp. aureus ED98   14 7
No Yes Staphylococcus aureus subsp. aureus TW20   16 8
No Yes Staphylococcus aureus subsp. aureus 55/2053   16 8
No Yes Staphylococcus aureus subsp. aureus TCH60   16 8
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   14 7
No Yes Staphylococcus aureus subsp. aureus 71193   14 7
No Yes Staphylococcus aureus subsp. aureus S0385   14 7
No Yes Staphylococcus aureus subsp. aureus str. Newman   14 7
No Yes Staphylococcus aureus subsp. aureus Mu3   14 7
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   14 7
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   14 7
No Yes Staphylococcus aureus subsp. aureus JH9   14 7
No Yes Staphylococcus aureus subsp. aureus MSSA476   16 8
No Yes Staphylococcus aureus subsp. aureus MRSA252   12 6
No Yes Staphylococcus aureus subsp. aureus MW2   16 8
No Yes Staphylococcus aureus subsp. aureus N315   14 7
No Yes Staphylococcus aureus subsp. aureus Mu50   14 7
No Yes Staphylococcus aureus subsp. aureus COL   14 7
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   12 6
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Ralstonia pickettii 12J   6 6
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia sp. YI23   4 4
No Yes Burkholderia sp. KJ006   5 5
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   8 8
No Yes Burkholderia pseudomallei NCTC 13179   8 8
No Yes Burkholderia pseudomallei BPC006   8 8
No Yes Burkholderia pseudomallei 1026b   8 8
No Yes Burkholderia pseudomallei MSHR346   5 5
No Yes Burkholderia pseudomallei 668   8 8
No Yes Burkholderia pseudomallei 1710b   8 8
No Yes Burkholderia pseudomallei K96243   8 8
No Yes Burkholderia mallei NCTC 10229   2 2
No Yes Burkholderia mallei NCTC 10247   2 2
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   2 2
No Yes Burkholderia ambifaria MC40-6   18 18
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   2 2
No Yes Burkholderia cenocepacia J2315   2 2
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia cepacia GG4   9 9
No Yes Variovorax paradoxus EPS   2 2
No Yes Bordetella pertussis CS   4 4
No Yes Bordetella parapertussis 18323   4 4
No Yes Bordetella parapertussis Bpp5   7 7
No Yes Bordetella bronchiseptica MO149   8 8
No Yes Bordetella bronchiseptica 253   8 8
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   3 3
No Yes Haemophilus influenzae KR494   6 6
No Yes Haemophilus influenzae F3047   20 16
No Yes Haemophilus influenzae F3031   16 14
No Yes Haemophilus influenzae PittGG   3 3
No Yes Haemophilus influenzae R2866   3 3
No Yes Aeromonas hydrophila ML09-119   6 6
No Yes Shewanella sp. W3-18-1   2 2
No Yes Shewanella sp. MR-7   2 2
No Yes Shewanella putrefaciens 200   2 2
No Yes Alcanivorax dieselolei B5   4 4
No Yes Thalassolituus oleivorans MIL-1   3 3
No Yes Stenotrophomonas maltophilia D457   2 2
No Yes Stenotrophomonas maltophilia JV3   5 5
No Yes Stenotrophomonas maltophilia R551-3   2 2
No Yes Xylella fastidiosa subsp. fastidiosa GB514   3 2
No Yes Xylella fastidiosa M12   4 3
No Yes Xylella fastidiosa Temecula1   3 2
No Yes Xylella fastidiosa 9a5c   4 4
No Yes Proteus mirabilis BB2000   52 50
No Yes Morganella morganii subsp. morganii KT   25 25
No Yes Edwardsiella tarda C07-087   10 10
No Yes Edwardsiella tarda FL6-60   6 6
No Yes Rahnella aquatilis HX2   15 15
No Yes Yersinia pseudotuberculosis PB1/+   14 14
No Yes Yersinia pseudotuberculosis YPIII   14 14
No Yes Yersinia pseudotuberculosis IP 32953   14 14
No Yes Yersinia pestis biovar Microtus str. 91001   14 14
No Yes Yersinia pestis A1122   12 12
No Yes Yersinia pestis Z176003   10 10
No Yes Yersinia pestis D182038   14 14
No Yes Yersinia pestis D106004   14 14
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   12 12
No Yes Yersinia pestis Nepal516   12 12
No Yes Yersinia pestis Antiqua   14 14
No Yes Yersinia pestis Angola   12 12
No Yes Yersinia pestis CO92   14 14
No Yes Yersinia pestis KIM10+   14 14
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   15 15
No Yes Yersinia enterocolitica subsp. palearctica Y11   16 16
No Yes Serratia sp. AS13   22 21
No Yes Serratia plymuthica S13   30 30
No Yes Serratia plymuthica 4Rx13   21 21
No Yes Serratia marcescens FGI94   16 15
No Yes Serratia marcescens WW4   41 41
No Yes Serratia liquefaciens ATCC 27592   16 15
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Pantoea ananatis LMG 5342   17 17
No Yes Pantoea ananatis PA13   12 12
No Yes Pantoea ananatis AJ13355   22 22
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Cronobacter sakazakii CMCC 45402   23 23
No Yes Cronobacter sakazakii SP291   27 26
No Yes Cronobacter sakazakii ATCC BAA-894   23 23
No Yes Raoultella ornithinolytica B6   20 19
No Yes Shigella sonnei 53G   33 31
No Yes Shigella flexneri 2002017   22 20
No Yes Shigella flexneri 2a str. 2457T   15 14
No Yes Shigella flexneri 2a str. 301   21 19
No Yes Shigella dysenteriae 1617   14 13
No Yes Shigella boydii Sb227   12 11
No Yes Salmonella bongori N268-08   27 27
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   13 13
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   27 27
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   30 30
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   31 31
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   37 37
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   33 33
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   34 34
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   31 31
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   33 33
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   30 30
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   27 27
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   29 29
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   27 27
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   28 28
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   28 28
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   28 28
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   28 28
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   27 27
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   28 28
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   28 28
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   29 29
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   29 29
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   28 28
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   30 30
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   26 26
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   28 28
No Yes Salmonella enterica serovar Bovismorbificans genomics   36 36
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   40 40
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   36 36
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   36 36
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   27 27
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   37 37
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   28 28
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   29 29
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   35 35
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   35 35
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   34 34
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   35 35
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   24 24
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   25 25
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   26 26
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   38 38
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   28 28
No Yes Klebsiella oxytoca KCTC 1686   46 45
No Yes Klebsiella pneumoniae JM45   22 21
No Yes Klebsiella pneumoniae CG43   29 28
No Yes Klebsiella pneumoniae KCTC 2242   24 23
No Yes Klebsiella pneumoniae 342   26 25
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   23 22
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   18 17
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   27 26
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   18 17
No Yes Enterobacter aerogenes EA1509E   29 27
No Yes Escherichia coli E24377A   33 31
No Yes Escherichia coli E. coli PMV-1   34 31
No Yes Escherichia coli JJ1886   26 24
No Yes Escherichia coli LY180   41 39
No Yes Escherichia coli APEC O78   38 36
No Yes Escherichia coli O7:K1 str. CE10   41 39
No Yes Escherichia coli O104:H4 str. 2009EL-2050   36 35
No Yes Escherichia coli O104:H4 str. 2009EL-2071   36 35
No Yes Escherichia coli O104:H4 str. 2011C-3493   36 35
No Yes Escherichia coli NA114   25 23
No Yes Escherichia coli P12b   26 25
No Yes Escherichia coli str. 'clone D i2'   33 30
No Yes Escherichia coli str. 'clone D i14'   33 30
No Yes Escherichia coli UM146   41 38
No Yes Escherichia coli 042   30 29
No Yes Escherichia coli Xuzhou21   43 41
No Yes Escherichia coli IHE3034   33 30
No Yes Escherichia coli UMNK88   31 30
No Yes Escherichia coli O83:H1 str. NRG 857C   30 28
No Yes Escherichia coli ABU 83972   41 38
No Yes Escherichia coli KO11FL   42 40
No Yes Escherichia coli KO11FL   42 40
No Yes Escherichia coli LF82   30 28
No Yes Escherichia coli ED1a   21 20
No Yes Escherichia coli IAI39   39 37
No Yes Escherichia coli UMN026   40 38
No Yes Escherichia coli 55989   35 34
No Yes Escherichia coli S88   29 28
No Yes Escherichia coli IAI1   41 39
No Yes Escherichia coli W   42 40
No Yes Escherichia coli W   42 40
No Yes Escherichia coli DH1   34 32
No Yes Escherichia coli DH1   34 32
No Yes Escherichia coli ATCC 8739   31 29
No Yes Escherichia coli BL21(DE3)   34 32
No Yes Escherichia coli BL21(DE3)   34 32
No Yes Escherichia coli SMS-3-5   36 34
No Yes Escherichia coli SE15   25 23
No Yes Escherichia coli SE11   42 40
No Yes Escherichia coli APEC O1   33 31
No Yes Escherichia coli O103:H2 str. 12009   36 34
No Yes Escherichia coli UTI89   39 36
No Yes Escherichia coli 536   41 39
No Yes Escherichia coli HS   31 29
No Yes Escherichia coli ETEC H10407   34 32
No Yes Escherichia coli O55:H7 str. RM12579   44 42
No Yes Escherichia coli O55:H7 str. CB9615   44 42
No Yes Escherichia coli O26:H11 str. 11368   38 36
No Yes Escherichia coli CFT073   45 42
No Yes Escherichia coli O111:H- str. 11128   38 36
No Yes Escherichia coli O127:H6 str. E2348/69   24 22
No Yes Escherichia coli O157:H7 str. TW14359   42 40
No Yes Escherichia coli O157:H7 str. EC4115   41 39
No Yes Escherichia coli O157:H7 str. Sakai   43 41
No Yes Escherichia coli O157:H7 str. EDL933   43 41
No Yes Escherichia coli str. K-12 substr. MDS42   26 25
No Yes Escherichia coli BW2952   34 32
No Yes Escherichia coli str. K-12 substr. MG1655   34 32
No Yes Escherichia coli str. K-12 substr. W3110   34 32
No Yes Escherichia coli str. K-12 substr. DH10B   26 25
No Yes Escherichia coli B str. REL606   34 32
No Yes Enterobacter cloacae SCF1   32 31
No Yes Enterobacter cloacae EcWSU1   13 13
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   30 29
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   28 28
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   31 31
No Yes Pseudomonas denitrificans ATCC 13867   4 4
No Yes Pseudomonas syringae pv. phaseolicola 1448A   5 5
No Yes Pseudomonas syringae pv. syringae B728a   4 4
No Yes Pseudomonas monteilii SB3101   2 2
No Yes Pseudomonas monteilii SB3078   2 2
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   2 2
No Yes Pseudomonas putida NBRC 14164   2 2
No Yes Pseudomonas putida DOT-T1E   4 4
No Yes Pseudomonas putida S16   2 2
No Yes Pseudomonas putida BIRD-1   2 2
No Yes Pseudomonas putida W619   2 2
No Yes Pseudomonas putida ND6   4 4
No Yes Pseudomonas putida KT2440   2 2
No Yes Pseudomonas putida GB-1   2 2
No Yes Pseudomonas protegens CHA0   4 4
No Yes Pseudomonas poae RE*1-1-14   12 12
No Yes Pseudomonas fluorescens A506   5 5
No Yes Pseudomonas fluorescens R124   2 2
No Yes Pseudomonas fluorescens Pf0-1   2 2
No Yes Pseudomonas resinovorans NBRC 106553   6 6
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   8 8
No Yes Pseudomonas aeruginosa MTB-1   7 7
No Yes Pseudomonas aeruginosa LES431   8 8
No Yes Pseudomonas aeruginosa RP73   8 8
No Yes Pseudomonas aeruginosa B136-33   8 8
No Yes Pseudomonas aeruginosa PA1R   6 6
No Yes Pseudomonas aeruginosa PA1   7 7
No Yes Pseudomonas aeruginosa DK2   8 8
No Yes Pseudomonas aeruginosa NCGM2.S1   6 6
No Yes Pseudomonas aeruginosa M18   8 8
No Yes Pseudomonas aeruginosa LESB58   8 8
No Yes Pseudomonas aeruginosa PA7   7 7
No Yes Pseudomonas aeruginosa PAO1   8 8
No Yes Acinetobacter genomosp. 13TU RUH2624   5 5
No Yes Acinetobacter sp. SH024   5 5
No Yes Acinetobacter calcoaceticus ruh2202   4 4
No Yes Acinetobacter baumannii ZW85-1   5 5
No Yes Acinetobacter baumannii TYTH-1   4 4
No Yes Acinetobacter baumannii BJAB0868   4 4
No Yes Acinetobacter baumannii BJAB0715   4 4
No Yes Acinetobacter baumannii BJAB07104   5 5
No Yes Acinetobacter baumannii TCDC-AB0715   7 7
No Yes Acinetobacter baumannii D1279779   4 4
No Yes Acinetobacter baumannii MDR-TJ   5 5
No Yes Acinetobacter baumannii 1656-2   4 4
No Yes Acinetobacter baumannii ATCC 19606   5 5
No Yes Acinetobacter baumannii AB307-0294   5 5
No Yes Acinetobacter baumannii AYE   4 4
No Yes Acinetobacter baumannii MDR-ZJ06   4 4
No Yes Acinetobacter baumannii AB0057   5 5
No Yes Acinetobacter baumannii ACICU   5 5
No Yes Acinetobacter junii SH205   3 3
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   2 2
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes 1_050719N (meta-genome)   7 7
No Yes 2_050719S (meta-genome)   7 7
No Yes 3_050719R (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   27 26
No Yes 5_050719P (meta-genome)   19 19
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   6 6
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   5 5
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   210 207
No Yes Combined (meta-genome)   388 385
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   303 300
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   62 61
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   79 79
No Yes Dump bottom (Dump bottom) (meta-genome)   7 7
No Yes Dump top (Dump top) (meta-genome)   10 9
No Yes Endophytic microbiome from Rice (meta-genome)   23 23
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   220 212
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   486 484
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   530 523
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   3 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Human Gut Community Subject 7 (meta-genome)   9 5
No Yes Human Gut Community Subject 8 (meta-genome)   5 5
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   12 11
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   6 6
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   3 3
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   6 6
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   41 40
No Yes NCBI 2017_08 genome   897542 775044
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   3 3
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   23 21
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   8 7
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   17 14
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   3 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   3529 2848
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   7 7
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Uniprot 2018_03 genome   59727 46181
No Yes Global Ocean Sampling Expedition (GOS)   48 48
No Yes NCBI plasmid sequences (Plasmids)   198 152
No Yes PDB chains (SCOP 1.75) (PDB)   39 34
No Yes Protein Data Bank (all PDB sequenc)   604 495
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1154 1154
No Yes TargetDB (Targets)   229 184
No Yes The Salmonella enterica Pan-genome (meta-genome)   943 943

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