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Cupredoxins superfamily domain assignments
in
Candidatus Nitrospira defluvii

Assignment details

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Candidatus Nitrospira defluvii has 26 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|302036188|ref|YP_003796510.1|   0.000000000171   88-174   Periplasmic domain of cytochrome c oxidase subunit II  
gi|302036597|ref|YP_003796919.1|   5.82e-17   47-147   Plastocyanin/azurin-like  
gi|302036765|ref|YP_003797087.1|   1.04e-16   2-87   Plastocyanin/azurin-like  
gi|302037255|ref|YP_003797577.1|   0.00000000165   22-134   Plastocyanin/azurin-like  
gi|302037846|ref|YP_003798168.1|   2.75e-36   163-307   Multidomain cupredoxins  
  1.56e-34   32-176   Multidomain cupredoxins  
gi|302038604|ref|YP_003798926.1|   0.0000000000772   385-539   Multidomain cupredoxins  
  0.000000000354   211-311   Multidomain cupredoxins  
  0.00000000279   1089-1203   Multidomain cupredoxins  
  0.0000019   1283-1392   Multidomain cupredoxins  
  0.0000332   1493-1590   Multidomain cupredoxins  
gi|302038799|ref|YP_003799121.1|   8.43e-27   472-588   Multidomain cupredoxins  
  5.3e-23   289-403   Multidomain cupredoxins  
  2.31e-18   106-273   Multidomain cupredoxins  
gi|302038807|ref|YP_003799129.1|   0.00000000000471   388-543   Multidomain cupredoxins  
  0.000000000427   159-255,489-558   Multidomain cupredoxins  
  0.000000319   1104-1207   Multidomain cupredoxins  
  0.00000637   1496-1594   Multidomain cupredoxins  
  0.000111   1290-1394   Multidomain cupredoxins  
  0.00278   939-982   Multidomain cupredoxins  
gi|302039210|ref|YP_003799532.1|   0.000000000135   391-540   Multidomain cupredoxins  
  0.000000000371   1121-1228   Multidomain cupredoxins  
  0.00000000447   218-318   Multidomain cupredoxins  
  0.00000258   1305-1415   Multidomain cupredoxins  
  0.0000168   1517-1615   Multidomain cupredoxins  
  0.0142   793-845,947-1000   Multidomain cupredoxins  
gi|302039413|ref|YP_003799735.1|   0.0000363   68-148   Nitrosocyanin  
gi|302039520|ref|YP_003799842.1|   8.1e-36   35-175   Multidomain cupredoxins  
  3.54e-35   159-309   Multidomain cupredoxins  
 
Weak hits:
gi|302035531|ref|YP_003795853.1|   0.000446   16-105   Plastocyanin/azurin-like  
gi|302037400|ref|YP_003797722.1|   0.000886   20-113   Multidomain cupredoxins  
gi|302039110|ref|YP_003799432.1|   0.0268   29-154   Nitrosocyanin  
gi|302039111|ref|YP_003799433.1|   0.0547   26-112   Nitrosocyanin  
gi|302039209|ref|YP_003799531.1|   0.0115   120-201   Nitrosocyanin  
gi|302039533|ref|YP_003799855.1|   0.00417   101-144   Nitrosocyanin  

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Select to display   Genome       Domains   Proteins
No Yes ALL   903437 903437
No Yes Homo sapiens 76_38 Human 104 41
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 38 18
No Yes Gorilla gorilla 76_3.1 Western gorilla 64 29
No Yes Pongo abelii 76_2 Sumatran orangutan 40 17
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 46 17
No Yes Papio anubis 76 Olive baboon 41 18
No Yes Macaca mulatta 76_1 Rhesus monkey 39 23
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 97 38
No Yes Otolemur garnettii 76_3 Small-eared galago 43 19
No Yes Microcebus murinus 76_1 Gray mouse lemur 38 13
No Yes Rattus norvegicus 76_5.0 Norway rat 44 20
No Yes Mus musculus 76_38 House mouse 98 38
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 41 17
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 41 20
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 41 16
No Yes Cavia porcellus 76_3 Domestic guinea pig 42 17
No Yes Oryctolagus cuniculus 76_2 Rabbit 49 19
No Yes Ochotona princeps 76 American pika 32 17
No Yes Tupaia belangeri 76 Northern tree shrew 36 15
No Yes Sus scrofa 76_10.2 Pig 85 35
No Yes Bos taurus 76_3.1 Cattle 44 19
No Yes Ovis aries 76_3.1 Sheep 64 24
No Yes Vicugna pacos 76_1 Alpaca 36 10
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 43 18
No Yes Mustela putorius furo 76_1.0 Domestic ferret 44 22
No Yes Ailuropoda melanoleuca 76_1 Giant panda 53 23
No Yes Canis familiaris 76_3.1 Dog 51 24
No Yes Felis catus 76_6.2 Domestic cat 42 17
No Yes Equus caballus 76_2 Horse 47 22
No Yes Myotis lucifugus 76_2.0 Little brown bat 49 21
No Yes Pteropus vampyrus 76_1 Large flying fox 42 18
No Yes Sorex araneus 76_1 European shrew 33 14
No Yes Erinaceus europaeus 76 Western European hedgehog 33 11
No Yes Procavia capensis 76_1 Cape rock hyrax 37 19
No Yes Loxodonta africana 76_3 African savanna elephant 58 25
No Yes Echinops telfairi 76 Small Madagascar hedgehog 32 15
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 43 19
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 22 10
No Yes Macropus eugenii 76_1.0 Tammar wallaby 40 14
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 48 18
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 56 23
No Yes Ornithorhynchus anatinus 76_5 Platypus 52 22
No Yes Saccoglossus kowalevskii v3.0   34 21
No Yes Petromyzon marinus 76_7.0 Sea lamprey 14 9
No Yes Meleagris gallopavo 76_2 Turkey 39 14
No Yes Gallus gallus 76_4 Chicken 37 12
No Yes Anas platyrhynchos 76_1.0 Mallard 39 14
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 43 16
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 40 15
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 51 16
No Yes Anolis carolinensis 76_2.0 Green anole 37 12
No Yes Xenopus laevis African clawed frog 32 32
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 35 16
No Yes Latimeria chalumnae 76_1 Coelacanth 46 16
No Yes Lepisosteus oculatus 76 Spotted gar 55 21
No Yes Gadus morhua 76_1 Atlantic cod 38 18
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 78 28
No Yes Takifugu rubripes 76_4 Torafugu 157 69
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 53 26
No Yes Oryzias latipes 76_1 Japanese medaka 54 29
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 38 19
No Yes Poecilia formosa 76 Amazon molly 37 17
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 54 24
No Yes Astyanax mexicanus 76 Mexican tetra 55 25
No Yes Danio rerio 76_9 Zebrafish 74 41
No Yes Oikopleura dioica   15 10
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 71 26
No Yes Ciona intestinalis 76 Vase tunicate 37 24
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 45 19
No Yes Adineta vaga   54 25
No Yes Octopus bimaculoides 280   42 15
No Yes Crassostrea gigas 22 Pacific oyster 102 44
No Yes Lottia gigantea Owl limpet 43 16
No Yes Helobdella robusta   4 4
No Yes Capitella sp. I   25 13
No Yes Danaus plexippus OGS1.0 Monarch butterfly 14 6
No Yes Heliconius melpomene Postman butterfly 13 5
No Yes Bombyx mori Domestic silkworm 14 9
No Yes Nasonia vitripennis Jewel wasp 30 12
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 83 48
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 26 11
No Yes Linepithema humile v1.1 Argentine ant 15 7
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 19 12
No Yes Solenopsis invicta v.2.2.3 Red fire ant 22 14
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 10 4
No Yes Atta cephalotes v1.1   17 11
No Yes Camponotus floridanus v3.3 Florida carpenter ant 23 11
No Yes Lucilia cuprina Australian sheep blowfly 20 7
No Yes Drosophila grimshawi 1.3   18 7
No Yes Drosophila willistoni 1.3   15 6
No Yes Drosophila pseudoobscura 2.13   15 6
No Yes Drosophila persimilis 1.3   15 6
No Yes Drosophila suzukii   11 4
No Yes Drosophila yakuba 1.3   16 8
No Yes Drosophila simulans 1.3   13 6
No Yes Drosophila sechellia 1.3   15 7
No Yes Drosophila melanogaster 76_5 Fruit fly 31 13
No Yes Drosophila erecta 1.3   14 6
No Yes Drosophila ananassae 1.3   14 6
No Yes Drosophila virilis 1.2   15 7
No Yes Drosophila mojavensis 1.3   15 7
No Yes Megaselia scalaris 22   16 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 22 8
No Yes Culex pipiens quinquefasciatus Southern house mosquito 28 12
No Yes Anopheles darlingi 22 American malaria mosquito 19 8
No Yes Anopheles gambiae 49_3j African malaria mosquito 19 8
No Yes Tribolium castaneum 3.0 Red flour beetle 12 6
No Yes Pediculus humanus corporis (Early assembly) Human body louse 12 5
No Yes Acyrthosiphon pisum Pea aphid 10 4
No Yes Rhodnius prolixus 22   24 12
No Yes Daphnia pulex Common water flea 10 5
No Yes Strigamia maritima 22   28 6
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 2 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 2 2
No Yes Pristionchus pacificus   1 1
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   8 8
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica   10 8
No Yes Caenorhabditis brenneri   11 7
No Yes Caenorhabditis remanei   8 6
No Yes Caenorhabditis elegans 76_235 Roundworm 13 9
No Yes Caenorhabditis briggsae 2   8 6
No Yes Trichinella spiralis 22   6 6
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   3 3
No Yes Mnemiopsis leidyi Sea walnut 15 7
No Yes Acropora digitifera v1.0   39 17
No Yes Nematostella vectensis 1.0 Starlet sea anemone 12 12
No Yes Hydra vulgaris   23 12
No Yes Amphimedon queenslandica   77 33
No Yes Proterospongia sp. ATCC 50818   24 12
No Yes Monosiga brevicollis   14 7
No Yes Sphaeroforma arctica JP610   17 8
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0   3 1
No Yes Mortierella verticillata NRRL 6337   18 8
No Yes Phycomyces blakesleeanus   20 8
No Yes Rhizopus oryzae RA 99-880   17 7
No Yes Mucor circinelloides   21 9
No Yes Rhizomucor miehei CAU432   22 9
No Yes Malassezia globosa CBS 7966   44 24
No Yes Sporisorium reilianum 22   19 7
No Yes Ustilago maydis   18 6
No Yes Mixia osmundae IAM 14324 v1.0   6 4
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   60 21
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   34 17
No Yes Melampsora laricis-populina   59 25
No Yes Rhodotorula graminis WP1 v1.0   7 3
No Yes Sporobolomyces roseus IAM 13481   6 4
No Yes Microbotryum violaceum 22   12 4
No Yes Wallemia sebi v1.0   10 4
No Yes Sphaerobolus stellatus v1.0   102 55
No Yes Piloderma croceum F 1598 v1.0   76 32
No Yes Serpula lacrymans var. lacrymans S7.9   20 8
No Yes Coniophora puteana   28 11
No Yes Hydnomerulius pinastri v2.0   37 14
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   52 20
No Yes Pisolithus microcarpus 441 v1.0   28 10
No Yes Pisolithus tinctorius Marx 270 v1.0   36 18
No Yes Scleroderma citrinum Foug A v1.0   36 14
No Yes Coprinopsis cinerea okayama7 130 v3   62 26
No Yes Pleurotus ostreatus Oyster mushroom 51 25
No Yes Amanita thiersii Skay4041 v1.0   60 31
No Yes Amanita muscaria Koide v1.0 Fly agaric 65 27
No Yes Galerina marginata v1.0   45 25
No Yes Hebeloma cylindrosporum h7 v2.0   23 14
No Yes Laccaria bicolor S238N-H82   49 26
No Yes Agaricus bisporus var. bisporus   50 23
No Yes Schizophyllum commune   24 11
No Yes Stereum hirsutum FP-91666 SS1 v1.0   71 29
No Yes Heterobasidion annosum   62 27
No Yes Gloeophyllum trabeumv1.0   25 12
No Yes Punctularia strigosozonata v1.0   50 21
No Yes Sebacina vermifera MAFF 305830 v1.0   26 13
No Yes Fomitiporia mediterranea v1.0   47 22
No Yes Tulasnella calospora AL13/4D v1.0   24 18
No Yes Postia placenta   31 17
No Yes Wolfiporia cocos MD-104 SS10 v1.0   22 10
No Yes Fomitopsis pinicolav1.0   28 12
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   28 12
No Yes Phanerochaete chrysosporium RP-78 2.1   27 16
No Yes Dichomitus squalens   52 24
No Yes Trametes versicolor v1.0   41 19
No Yes Tremella mesenterica Witches' butter 14 6
No Yes Daldinia eschscholzii EC12 v1.0   28 12
No Yes Apiospora montagnei NRRL 25634 v1.0   63 27
No Yes Magnaporthe poae ATCC 64411 22   43 19
No Yes Magnaporthe grisea 70-15   61 26
No Yes Podospora anserina   52 21
No Yes Sporotrichum thermophile ATCC 42464   21 10
No Yes Thielavia terrestris NRRL 8126   39 17
No Yes Chaetomium globosum CBS 148.51   29 12
No Yes Neurospora tetrasperma   36 15
No Yes Neurospora discreta FGSC 8579   34 14
No Yes Neurospora crassa OR74A   38 16
No Yes Cryphonectria parasitica Chestnut blight fungus 54 22
No Yes Verticillium albo-atrum VaMs.102   21 10
No Yes Verticillium dahliae VdLs.17   24 12
No Yes Acremonium alcalophilumv 1.0   13 7
No Yes Glomerella graminicola 22   69 29
No Yes Fusarium graminearum   47 20
No Yes Nectria haematococca mpVI   50 23
No Yes Fusarium oxysporum f. sp. lycopersici 4286   62 30
No Yes Fusarium verticillioides 7600   45 23
No Yes Trichoderma asperellum CBS 433.97 v1.0   41 19
No Yes Trichoderma atroviride   39 17
No Yes Trichoderma citrinoviride v1.0   32 15
No Yes Trichoderma reesei 1.2   30 14
No Yes Trichoderma virens Gv29-8   37 17
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   28 14
No Yes Trichoderma harzianum CBS 226.95 v1.0   33 16
No Yes Amorphotheca resinae v1.0 Creosote fungus 42 19
No Yes Botrytis cinerea B05.10   45 21
No Yes Sclerotinia sclerotiorum   32 16
No Yes Blumeria graminis 22   8 4
No Yes Didymella exigua CBS 183.55 v1.0   40 20
No Yes Leptosphaeria maculans 22   25 13
No Yes Setosphaeria turcica v1.0   35 17
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   45 21
No Yes Cochliobolus victoriae FI3 v1.0   41 19
No Yes Cochliobolus carbonum 26-R-13 v1.0   41 19
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 45 21
No Yes Alternaria brassicicola   28 15
No Yes Cochliobolus lunatus m118 v2.0   45 21
No Yes Pyrenophora teres f. teres 22   36 18
No Yes Pyrenophora tritici-repentis   44 21
No Yes Stagonospora nodorum   43 23
No Yes Mycosphaerella graminicola IPO323   28 10
No Yes Zasmidium cellare ATCC 36951 v1.0   87 31
No Yes Dothistroma septosporum   46 17
No Yes Septoria musiva v1.0   25 9
No Yes Mycosphaerella fijiensis CIRAD86   46 16
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   35 14
No Yes Paracoccidioides brasiliensis Pb18   16 8
No Yes Coccidioides posadasii RMSCC 3488   13 8
No Yes Coccidioides immitis RS   14 9
No Yes Ajellomyces dermatitidis SLH14081   14 8
No Yes Histoplasma capsulatum class NAmI strain WU24   13 8
No Yes Microsporum canis CBS 113480   23 11
No Yes Trichophyton equinum CBS 127.97   26 11
No Yes Trichophyton verrucosum HKI 0517   17 8
No Yes Arthroderma benhamiae CBS 112371   17 8
No Yes Trichophyton tonsurans CBS 112818   27 12
No Yes Trichophyton rubrum CBS 118892   22 9
No Yes Uncinocarpus reesii 1704   9 6
No Yes Aspergillus zonatus v1.0   43 17
No Yes Penicillium chrysogenum Wisconsin 54-1255   37 14
No Yes Penicillium chrysogenum v1.0   32 13
No Yes Aspergillus acidus v1.0   40 14
No Yes Aspergillus fumigatus Af293   21 10
No Yes Aspergillus brasiliensis v1.0   59 23
No Yes Aspergillus nidulans FGSC A4   25 9
No Yes Aspergillus sydowii v1.0   49 19
No Yes Aspergillus versicolor v1.0   34 13
No Yes Aspergillus glaucus   20 9
No Yes Aspergillus carbonarius ITEM 5010   31 11
No Yes Neosartorya fischeri NRRL 181   25 11
No Yes Aspergillus terreus NIH2624   29 12
No Yes Aspergillus tubingensis v1.0   37 13
No Yes Aspergillus wentii v1.0   36 13
No Yes Aspergillus oryzae RIB40   28 11
No Yes Aspergillus niger 22   49 17
No Yes Aspergillus niger ATCC 1015   41 14
No Yes Aspergillus flavus NRRL3357   36 14
No Yes Aspergillus clavatus NRRL 1   16 6
No Yes Penicillium marneffei ATCC 18224   36 15
No Yes Tuber melanosporum Mel28 22   28 14
No Yes Tuber melanosporum Vittad Perigord truffle 28 14
No Yes Hansenula polymorpha v2.0   6 2
No Yes Dekkera bruxellensis CBS 2499 v2.0   10 4
No Yes Pichia membranifaciensv1.0   9 3
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   9 3
No Yes Candida dubliniensis CD36   15 5
No Yes Candida tropicalis MYA-3404   9 3
No Yes Candida parapsilosis   9 3
No Yes Candida albicans SC5314   15 6
No Yes Lodderomyces elongisporus NRRL YB-4239   9 3
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   13 5
No Yes Pichia stipitis CBS 6054   6 2
No Yes Candida guilliermondii ATCC 6260   9 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   10 4
No Yes Debaromyces hansenii   9 3
No Yes Wickerhamomyces anomalus   15 5
No Yes Pichia pastoris GS115   6 2
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   6 2
No Yes Yarrowia lipolytica CLIB122   9 3
No Yes Candida lusitaniae ATCC 42720   10 4
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   9 3
No Yes Vanderwaltozyma polyspora DSM 70294   10 4
No Yes Candida glabrata CBS138   9 3
No Yes Kluyveromyces thermotolerans CBS 6340   9 3
No Yes Lachancea kluyveri   9 3
No Yes Kluyveromyces waltii   9 3
No Yes Ashbya gossypii ATCC 10895   10 4
No Yes Zygosaccharomyces rouxii   12 4
No Yes Saccharomyces mikatae MIT   9 3
No Yes Saccharomyces paradoxus MIT   9 3
No Yes Saccharomyces cerevisiae 76 Baker's yeast 10 4
No Yes Saccharomyces bayanus MIT   9 4
No Yes Kluyveromyces lactis   9 3
No Yes Schizosaccharomyces cryophilus OY26 22   3 1
No Yes Schizosaccharomyces octosporus yFS286   3 1
No Yes Schizosaccharomyces japonicus yFS275   3 1
No Yes Schizosaccharomyces pombe Fission yeast 4 2
No Yes Catenaria anguillulae PL171 v1.0   3 2
No Yes Allomyces macrogynus ATCC 38327   11 6
No Yes Spizellomyces punctatus DAOM BR117   14 5
No Yes Dictyostelium discoideum   3 3
No Yes Selaginella moellendorffii   134 75
No Yes Pinus taeda Loblolly pine 466 265
No Yes Picea abies Norway spruce 287 145
No Yes Eucalyptus grandis v201 Rose gum 439 206
No Yes Theobroma cacao B97-61/B2 v1 Cacao 212 120
No Yes Gossypium raimondii v221   429 202
No Yes Citrus clementina v165   178 99
No Yes Citrus sinensis v154 Sweet orange 205 107
No Yes Thellungiella halophila v173   219 115
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 297 158
No Yes Capsella rubella v183   205 107
No Yes Arabidopsis lyrata Lyrate rockcress 195 103
No Yes Arabidopsis thaliana 10 Thale cress 187 96
No Yes Carica papaya Papaya 137 77
No Yes Medicago truncatula Barrel medic 257 150
No Yes Phaseolus vulgaris v186 French bean 221 118
No Yes Glycine max v109 Soybean 414 206
No Yes Cucumis sativus v122 Cucumber 176 92
No Yes Fragaria vesca Wild strawberry 287 156
No Yes Malus domestica v196 Apple 398 248
No Yes Prunus persica v139 Peach 229 128
No Yes Linum usitatissimum v200 Flax 362 192
No Yes Manihot esculenta v147 Cassava 220 115
No Yes Populus trichocarpa v156 Black cottonwood 332 170
No Yes Vitis vinifera Wine grape 253 123
No Yes Mimulus guttatus v140 Spotted monkey flower 194 108
No Yes Solanum lycopersicum v.2.3 Tomato 216 118
No Yes Solanum tuberosum Potato 288 153
No Yes Actinidia chinensis Hongyang   272 145
No Yes Aquilegia coerulea v195   227 109
No Yes Triticum urartu 22   205 120
No Yes Triticum aestivum 22 Bread wheat 547 422
No Yes Aegilops tauschii 22   229 142
No Yes Brachypodium distachyon Stiff brome 201 114
No Yes Oryza barthii 22 African wild rice 204 104
No Yes Oryza meridionalis 22   213 111
No Yes Oryza glumaepatula 22   216 111
No Yes Oryza glaberrima African rice 167 95
No Yes Oryza punctata 22   216 111
No Yes Oryza nivara 22   230 113
No Yes Oryza brachyantha 22 Malo sina 182 110
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 223 119
No Yes Oryza sativa v193 Rice 223 119
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 159 92
No Yes Panicum virgatum v202 Switchgrass 364 199
No Yes Setaria italica v164 Foxtail millet 281 136
No Yes Zea mays subsp. mays Maize 235 134
No Yes Zea mays v181 Maize 249 141
No Yes Sorghum bicolor Sorghum 199 115
No Yes Musa balbisiana Balbis banana 229 123
No Yes Musa acuminata 22 Wild Malaysian banana 218 116
No Yes Amborella trichopoda 22   119 72
No Yes Physcomitrella patens   69 44
No Yes Coccomyxa subellipsoidea sp. C-169 v2   21 11
No Yes Asterochloris sp. Cgr/DA1pho v1.0   10 6
No Yes Chlorella variabilis sp. NC64A   27 15
No Yes Chlorella vulgaris   18 10
No Yes Volvox carteri f. nagariensis   21 9
No Yes Volvox carteri v199   19 8
No Yes Chlamydomonas reinhardtii 4.0   36 16
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   2 2
No Yes Ostreococcus tauri   3 2
No Yes Bathycoccus prasinos   7 5
No Yes Micromonas sp. RCC299   3 3
No Yes Micromonas pusilla CCMP1545 v3.0   5 3
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Thecamonas trahens ATCC 50062   3 1
No Yes Bigelowiella natans CCMP2755 22   5 3
No Yes Cyanophora paradoxa   7 4
No Yes Leishmania mexicana 2.4   3 1
No Yes Leishmania major strain Friedlin   3 1
No Yes Leishmania infantum JPCM5 2.4   3 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   3 1
No Yes Trypanosoma vivax   3 1
No Yes Trypanosoma cruzi strain CL Brener   3 1
No Yes Trypanosoma congolense 2.4   2 2
No Yes Trypanosoma brucei gambiense v4.1   3 1
No Yes Trypanosoma brucei TREU927 v4.1   3 1
No Yes Ectocarpus siliculosus   7 4
No Yes Aureococcus anophagefferens   15 11
No Yes Albugo laibachii 22   19 7
No Yes Pythium iwayamai DAOM BR242034 22   15 6
No Yes Pythium arrhenomanes ATCC 12531 22   18 6
No Yes Pythium ultimum v1.7-2   15 6
No Yes Pythium aphanidermatum DAOM BR444 22   17 7
No Yes Pythium irregulare DAOM BR486 22   16 6
No Yes Pythium vexans DAOM BR484 22   24 11
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 36 12
No Yes Phytophthora sojae 1.1   42 16
No Yes Phytophthora infestans T30-4   23 8
No Yes Phytophthora capsici   21 9
No Yes Hyaloperonospora arabidopsidis 22   8 4
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 1
No Yes Fragilariopsis cylindrus   48 31
No Yes Thalassiosira pseudonana CCMP1335   3 1
No Yes Perkinsus marinus ATCC 50983   6 6
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Neospora caninum   1 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Toxoplasma gondii GT1   1 1
No Yes Babesia bovis T2Bo   4 4
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   8 5
No Yes Naegleria gruberi   6 3
No Yes Guillardia theta CCMP2712 v1.0   5 2
No Yes Emiliania huxleyi CCMP1516   63 39
No Yes Thermobaculum terrenum ATCC BAA-798   12 6
No Yes Leptolyngbya sp. PCC 7376   6 3
No Yes Pseudanabaena sp. PCC 7367   6 4
No Yes Acaryochloris marina MBIC11017   3 3
No Yes Synechocystis sp. PCC 6803   3 3
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   4 4
No Yes Synechococcus sp. PCC 6312   3 3
No Yes Synechococcus sp. CC9311   6 4
No Yes Synechococcus elongatus PCC 7942   4 4
No Yes Prochlorococcus marinus str. MIT 9515   3 3
No Yes Microcoleus sp. PCC 7113   9 8
No Yes Trichodesmium erythraeum IMS101   11 6
No Yes Geitlerinema sp. PCC 7407   6 5
No Yes Cyanothece sp. PCC 8802   13 6
No Yes Gloeocapsa sp. PCC 7428   15 9
No Yes cyanobacterium UCYN-A   2 2
No Yes Halothece sp. PCC 7418   9 6
No Yes Microcystis aeruginosa NIES-843   3 3
No Yes Gloeobacter violaceus PCC 7421   7 6
No Yes Rivularia sp. PCC 7116   14 9
No Yes Calothrix sp. PCC 7507   7 6
No Yes Anabaena variabilis ATCC 29413   11 9
No Yes 'Nostoc azollae' 0708   7 6
No Yes Nostoc sp. PCC 7107   7 6
No Yes Nostoc punctiforme PCC 73102   6 6
No Yes Nostoc sp. PCC 7120   10 8
No Yes Nostoc sp. PCC 7524   8 6
No Yes Anabaena sp. 90   7 6
No Yes Conexibacter woesei DSM 14684   20 16
No Yes Rubrobacter xylanophilus DSM 9941   5 2
No Yes Ilumatobacter coccineus   14 11
No Yes Acidimicrobium ferrooxidans DSM 10331   2 2
No Yes Thermobispora bispora DSM 43833   11 5
No Yes Nakamurella multipartita DSM 44233   4 2
No Yes Acidothermus cellulolyticus 11B   4 2
No Yes Modestobacter marinus   6 4
No Yes Blastococcus saxobsidens DD2   23 16
No Yes Geodermatophilus obscurus DSM 43160   11 7
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   10 7
No Yes Stackebrandtia nassauensis DSM 44728   11 5
No Yes Frankia symbiont of Datisca glomerata   4 3
No Yes Frankia sp. EAN1pec   7 5
No Yes Frankia alni ACN14a   5 3
No Yes Thermobifida fusca YX   4 2
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   24 10
No Yes Kitasatospora setae KM-6054   7 3
No Yes Streptomyces coelicolor A3(2)   7 6
No Yes Streptomyces sp. PAMC26508   8 5
No Yes Streptomyces flavogriseus ATCC 33331   7 4
No Yes Streptomyces sp. SirexAA-E   13 6
No Yes Streptomyces griseus subsp. griseus NBRC 13350   10 5
No Yes Streptomyces bingchenggensis BCW-1   14 6
No Yes Streptomyces violaceusniger Tu 4113   16 7
No Yes Streptomyces avermitilis MA-4680   9 6
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   8 3
No Yes Streptomyces scabiei 87.22   10 5
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   14 8
No Yes Actinosynnema mirum DSM 43827   4 2
No Yes Saccharomonospora viridis DSM 43017   6 4
No Yes Pseudonocardia dioxanivorans CB1190   11 6
No Yes Saccharopolyspora erythraea NRRL 2338   8 6
No Yes Amycolatopsis mediterranei U32   8 5
No Yes Kribbella flavida DSM 17836   11 5
No Yes Nocardioides sp. JS614   15 9
No Yes Propionibacterium propionicum F0230a   6 2
No Yes Propionibacterium acnes SK137   4 2
No Yes Microlunatus phosphovorus NM-1   15 7
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   6 2
No Yes Salinispora arenicola CNS-205   10 4
No Yes Salinispora tropica CNB-440   9 4
No Yes Verrucosispora maris AB-18-032   4 2
No Yes Micromonospora sp. L5   11 5
No Yes Micromonospora aurantiaca ATCC 27029   7 3
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes sp. SE50/110   10 6
No Yes Actinoplanes missouriensis 431   14 6
No Yes Segniliparus rotundus DSM 44985   1 1
No Yes Tsukamurella paurometabola DSM 20162   4 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   2 2
No Yes Gordonia bronchialis DSM 43247   6 4
No Yes Rhodococcus jostii RHA1   20 10
No Yes Rhodococcus equi 103S   14 8
No Yes Rhodococcus opacus B4   22 11
No Yes Rhodococcus erythropolis PR4   26 13
No Yes Nocardia cyriacigeorgica GUH-2   11 6
No Yes Nocardia farcinica IFM 10152   11 6
No Yes Amycolicicoccus subflavus DQS3-9A1   16 8
No Yes Mycobacterium massiliense str. GO 06   9 5
No Yes Mycobacterium abscessus ATCC 19977   10 6
No Yes Mycobacterium sp. JLS   11 5
No Yes Mycobacterium intracellulare ATCC 13950   9 5
No Yes Mycobacterium avium 104   6 4
No Yes Mycobacterium vanbaalenii PYR-1   11 7
No Yes Mycobacterium canettii CIPT 140010059   4 2
No Yes Mycobacterium africanum GM041182   4 2
No Yes Mycobacterium tuberculosis KZN 1435   4 2
No Yes Mycobacterium tuberculosis   4 2
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   4 2
No Yes Mycobacterium rhodesiae NBB3   15 9
No Yes Mycobacterium ulcerans Agy99   4 2
No Yes Mycobacterium gilvum PYR-GCK   9 5
No Yes Mycobacterium chubuense NBB4   11 7
No Yes Mycobacterium marinum M   8 4
No Yes Mycobacterium smegmatis str. MC2 155   3 3
No Yes Mycobacterium leprae Br4923   1 1
No Yes Corynebacterium resistens DSM 45100   1 1
No Yes Corynebacterium aurimucosum ATCC 700975   7 3
No Yes Corynebacterium kroppenstedtii DSM 44385   7 3
No Yes Corynebacterium efficiens YS-314   8 4
No Yes Corynebacterium ulcerans 0102   4 2
No Yes Corynebacterium urealyticum DSM 7109   4 2
No Yes Corynebacterium jeikeium K411   4 2
No Yes Corynebacterium variabile DSM 44702   1 1
No Yes Corynebacterium pseudotuberculosis 316   4 2
No Yes Corynebacterium glutamicum R   8 4
No Yes Corynebacterium diphtheriae NCTC 13129   7 3
No Yes Tropheryma whipplei TW08/27   1 1
No Yes Sanguibacter keddieii DSM 10542   2 2
No Yes Kytococcus sedentarius DSM 20547   4 2
No Yes Beutenbergia cavernae DSM 12333   4 2
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   1 1
No Yes Jonesia denitrificans DSM 20603   4 2
No Yes Intrasporangium calvum DSM 43043   18 8
No Yes Brachybacterium faecium DSM 4810   5 3
No Yes Isoptericola variabilis 225   7 4
No Yes Xylanimonas cellulosilytica DSM 15894   5 3
No Yes Cellulomonas flavigena DSM 20109   4 2
No Yes Cellulomonas fimi ATCC 484   4 2
No Yes [Cellvibrio] gilvus ATCC 13127   5 3
No Yes Arthrobacter phenanthrenivorans Sphe3   5 3
No Yes Arthrobacter chlorophenolicus A6   3 2
No Yes Arthrobacter aurescens TC1   16 7
No Yes Arthrobacter arilaitensis Re117   4 2
No Yes Kocuria rhizophila DC2201   1 1
No Yes Rothia mucilaginosa DY-18   3 1
No Yes Rothia dentocariosa ATCC 17931   5 3
No Yes Arthrobacter sp. Rue61a   9 4
No Yes Arthrobacter sp. FB24   15 7
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Micrococcus luteus NCTC 2665   4 2
No Yes Bifidobacterium longum subsp. longum JDM301   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl-04   1 1
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Bifidobacterium breve ACS-071-V-Sch8b   1 1
No Yes Bifidobacterium bifidum S17   1 1
No Yes Bifidobacterium adolescentis ATCC 15703   1 1
No Yes Actinomyces sp. F0330   6 2
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   8 7
No Yes Anaerolinea thermophila UNI-1   2 2
No Yes Thermomicrobium roseum DSM 5159   13 11
No Yes Sphaerobacter thermophilus DSM 20745   18 13
No Yes Herpetosiphon aurantiacus DSM 785   10 6
No Yes Roseiflexus sp. RS-1   5 5
No Yes Roseiflexus castenholzii DSM 13941   5 5
No Yes Chloroflexus sp. MS-G   7 7
No Yes Chloroflexus sp. Y-400-fl   13 10
No Yes Chloroflexus aggregans DSM 9485   9 8
No Yes Chloroflexus aurantiacus J-10-fl   13 10
No Yes Truepera radiovictrix DSM 17093   3 3
No Yes Deinococcus gobiensis I-0   2 2
No Yes Deinococcus deserti VCD115   6 4
No Yes Deinococcus maricopensis DSM 21211   5 3
No Yes Deinococcus geothermalis DSM 11300   5 4
No Yes Deinococcus proteolyticus MRP   2 2
No Yes Deinococcus radiodurans R1   1 1
No Yes Oceanithermus profundus DSM 14977   7 5
No Yes Marinithermus hydrothermalis DSM 14884   7 6
No Yes Meiothermus silvanus DSM 9946   7 5
No Yes Meiothermus ruber DSM 1279   6 4
No Yes Thermus sp. CCB_US3_UF1   2 2
No Yes Thermus scotoductus SA-01   9 5
No Yes Thermus thermophilus HB27   5 3
No Yes Symbiobacterium thermophilum IAM 14863   6 5
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Clostridium cellulolyticum H10   1 1
No Yes Ruminococcus albus 7   2 1
No Yes Thermaerobacter marianensis DSM 12885   16 12
No Yes Sulfobacillus acidophilus DSM 10332   8 7
No Yes Thermincola potens JR   4 2
No Yes Pelotomaculum thermopropionicum SI   2 1
No Yes Desulfosporosinus acidiphilus SJ4   5 3
No Yes Desulfosporosinus orientis DSM 765   4 2
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   6 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Clostridium lentocellum DSM 5427   6 2
No Yes Alkaliphilus oremlandii OhILAs   1 1
No Yes Clostridium sp. BNL1100   1 1
No Yes Clostridium beijerinckii NCIMB 8052   3 2
No Yes Clostridium cellulovorans 743B   2 1
No Yes Clostridium botulinum A str. ATCC 3502   3 1
No Yes Thermosediminibacter oceani DSM 16646   3 1
No Yes Carnobacterium sp. WN1359   3 1
No Yes Enterococcus sp. 7L76   2 1
No Yes Enterococcus faecalis 62   2 1
No Yes Weissella koreensis KACC 15510   1 1
No Yes Oenococcus oeni PSU-1   2 1
No Yes Leuconostoc citreum KM20   2 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   2 1
No Yes Lactobacillus casei ATCC 334   2 1
No Yes Lactobacillus kefiranofaciens ZW3   2 2
No Yes Lactobacillus crispatus ST1   5 3
No Yes Lactobacillus rhamnosus Lc 705   3 1
No Yes Lactobacillus johnsonii FI9785   2 2
No Yes Lactobacillus sanfranciscensis TMW 1.1304   2 1
No Yes Lactobacillus fermentum IFO 3956   5 3
No Yes Lactobacillus amylovorus GRL1118   5 3
No Yes Lactobacillus reuteri DSM 20016   2 2
No Yes Lactobacillus gasseri ATCC 33323   2 2
No Yes Lactobacillus plantarum JDM1   4 2
No Yes Lactobacillus helveticus DPC 4571   2 2
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   1 1
No Yes Lactobacillus buchneri NRRL B-30929   5 3
No Yes Lactobacillus buchneri   5 3
No Yes Lactobacillus brevis ATCC 367   3 2
No Yes Lactobacillus acidophilus 30SC   5 3
No Yes Pediococcus claussenii ATCC BAA-344   5 2
No Yes Pediococcus pentosaceus ATCC 25745   3 1
No Yes Streptococcus pseudopneumoniae IS7493   2 2
No Yes Streptococcus mitis B6   2 2
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus pneumoniae P1031   2 2
No Yes Streptococcus oralis Uo5   2 2
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Exiguobacterium sp. MH3   2 2
No Yes Exiguobacterium sp. AT1b   5 3
No Yes Exiguobacterium sibiricum 255-15   2 2
No Yes Kyrpidia tusciae DSM 2912   8 5
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   16 9
No Yes Brevibacillus brevis NBRC 100599   13 9
No Yes Paenibacillus sp. JDR-2   12 10
No Yes Paenibacillus terrae HPL-003   2 2
No Yes Paenibacillus mucilaginosus 3016   11 7
No Yes Paenibacillus polymyxa M1   2 2
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Solibacillus silvestris StLB046   5 3
No Yes Geobacillus thermoglucosidasius C56-YS93   5 4
No Yes Lysinibacillus sphaericus C3-41   11 6
No Yes Oceanobacillus iheyensis HTE831   6 4
No Yes Anoxybacillus flavithermus WK1   3 3
No Yes Geobacillus thermoleovorans CCB_US3_UF5   9 6
No Yes Geobacillus kaustophilus HTA426   10 7
No Yes Geobacillus sp. GHH01   9 6
No Yes Geobacillus sp. WCH70   6 4
No Yes Geobacillus thermodenitrificans NG80-2   14 9
No Yes Halobacillus halophilus DSM 2266   4 4
No Yes Bacillus sp. JS   5 3
No Yes Bacillus sp. 1NLA3E   18 9
No Yes Bacillus amyloliquefaciens FZB42   5 3
No Yes Bacillus atrophaeus 1942   5 3
No Yes Bacillus subtilis subsp. subtilis str. 168   5 3
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   5 3
No Yes Bacillus halodurans C-125   7 5
No Yes Bacillus weihenstephanensis KBAB4   6 4
No Yes Bacillus thuringiensis str. Al Hakam   5 3
No Yes Bacillus cereus 03BB102   6 4
No Yes Bacillus anthracis str. A0248   6 4
No Yes Bacillus pseudofirmus OF4   8 4
No Yes Bacillus clausii KSM-K16   6 4
No Yes Bacillus cellulosilyticus DSM 2522   8 8
No Yes Bacillus pumilus SAFR-032   5 3
No Yes Bacillus megaterium DSM 319   4 4
No Yes Bacillus coagulans 2-6   8 4
No Yes Macrococcus caseolyticus JCSC5402   2 2
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   1 1
No Yes Staphylococcus lugdunensis HKU09-01   1 1
No Yes Staphylococcus haemolyticus JCSC1435   4 2
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Staphylococcus aureus subsp. aureus JH1   1 1
No Yes Staphylococcus aureus   1 1
No Yes Gemmatimonas aurantiaca T-27   9 7
No Yes Melioribacter roseus P3M   4 4
No Yes Ignavibacterium album JCM 16511   2 2
No Yes Chlorobaculum parvum NCIB 8327   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   11 7
No Yes Saprospira grandis str. Lewin   1 1
No Yes Niastella koreensis GR20-10   5 3
No Yes Chitinophaga pinensis DSM 2588   4 2
No Yes Salinibacter ruber M8   5 5
No Yes Rhodothermus marinus DSM 4252   13 8
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Belliella baltica DSM 15883   8 5
No Yes Cyclobacterium marinum DSM 745   6 4
No Yes Marivirga tractuosa DSM 4126   13 8
No Yes Fibrella aestuarina   11 7
No Yes Leadbetterella byssophila DSM 17132   5 3
No Yes Dyadobacter fermentans DSM 18053   9 9
No Yes Cytophaga hutchinsonii ATCC 33406   2 2
No Yes Spirosoma linguale DSM 74   18 10
No Yes Runella slithyformis DSM 19594   9 7
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Pedobacter saltans DSM 12145   10 8
No Yes Solitalea canadensis DSM 3403   4 3
No Yes Pedobacter heparinus DSM 2366   2 2
No Yes Sphingobacterium sp. 21   5 3
No Yes Fluviicola taffensis DSM 16823   5 3
No Yes Owenweeksia hongkongensis DSM 17368   4 4
No Yes Zunongwangia profunda SM-A87   11 5
No Yes Krokinobacter sp. 4H-3-7-5   5 3
No Yes Gramella forsetii KT0803   14 6
No Yes Lacinutrix sp. 5H-3-7-4   5 3
No Yes Maribacter sp. HTCC2170   6 5
No Yes Robiginitalea biformata HTCC2501   7 5
No Yes Croceibacter atlanticus HTCC2559   5 3
No Yes Aequorivita sublithincola DSM 14238   10 7
No Yes Zobellia galactanivorans   4 4
No Yes Muricauda ruestringensis DSM 13258   6 5
No Yes Cellulophaga algicola DSM 14237   6 4
No Yes Cellulophaga lytica DSM 7489   2 2
No Yes Flavobacteriaceae bacterium 3519-10   3 2
No Yes Polaribacter sp. MED152   2 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   4 2
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga canimorsus Cc5   2 2
No Yes Weeksella virosa DSM 16922   1 1
No Yes Flavobacterium indicum GPTSA100-9   1 1
No Yes Flavobacterium psychrophilum JIP02/86   1 1
No Yes Flavobacterium branchiophilum FL-15   4 2
No Yes Flavobacterium columnare ATCC 49512   4 3
No Yes Flavobacterium johnsoniae UW101   10 5
No Yes Waddlia chondrophila WSU 86-1044   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Parachlamydia acanthamoebae UV-7   6 3
No Yes Simkania negevensis Z   6 3
No Yes Phycisphaera mikurensis NBRC 102666   8 4
No Yes Isosphaera pallida ATCC 43644   3 3
No Yes Planctomyces brasiliensis DSM 5305   4 4
No Yes Planctomyces limnophilus DSM 3776   4 4
No Yes Rhodopirellula baltica SH 1   5 5
No Yes Pirellula staleyi DSM 6068   2 2
No Yes Methylacidiphilum infernorum V4   9 5
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Opitutus terrae PB90-1   14 11
No Yes Turneriella parva DSM 21527   7 5
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   5 4
No Yes Leptospira interrogans serovar Lai str. IPAV   5 4
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   7 5
No Yes Treponema azotonutricium ZAS-9   4 2
No Yes Treponema primitia ZAS-2   1 1
No Yes Spirochaeta africana DSM 8902   1 1
No Yes Desulfurispirillum indicum S5   4 4
No Yes Denitrovibrio acetiphilus DSM 12809   2 2
No Yes Deferribacter desulfuricans SSM1   3 1
No Yes Sulfurihydrogenibium sp. YO3AOP1   4 2
No Yes Sulfurihydrogenibium azorense Az-Fu1   1 1
No Yes Persephonella marina EX-H1   6 4
No Yes Thermocrinis albus DSM 14484   6 4
No Yes Aquifex aeolicus VF5   4 2
No Yes Hydrogenobacter thermophilus TK-6   6 6
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   12 8
No Yes Granulicella tundricola MP5ACTX9   12 8
No Yes Granulicella mallensis MP5ACTX8   27 13
No Yes Candidatus Koribacter versatilis Ellin345   19 10
No Yes Terriglobus saanensis SP1PR4   20 12
No Yes Terriglobus roseus DSM 18391   9 6
No Yes Acidobacterium capsulatum ATCC 51196   8 4
No Yes Candidatus Nitrospira defluvii   26 11
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes Ilyobacter polytropus DSM 2926   8 4
No Yes Candidatus Methylomirabilis oxyfera   15 10
No Yes candidate division WWE3 bacterium RAAC2_WWE3_1   4 4
No Yes Candidatus Saccharibacteria bacterium RAAC3_TM7_1   2 2
No Yes Acidithiobacillus ferrivorans SS3   8 8
No Yes Acidithiobacillus caldus SM-1   6 4
No Yes Acidithiobacillus ferrooxidans ATCC 53993   4 4
No Yes Bacteriovorax marinus SJ   3 3
No Yes Bdellovibrio bacteriovorus HD100   5 4
No Yes Nitratifractor salsuginis DSM 16511   1 1
No Yes Campylobacter lari RM2100   3 1
No Yes Campylobacter curvus 525.92   1 1
No Yes Campylobacter concisus 13826   1 1
No Yes Campylobacter jejuni subsp. doylei 269.97   3 2
No Yes Campylobacter sp. 03-427   4 2
No Yes Campylobacter fetus subsp. fetus 82-40   4 2
No Yes uncultured Sulfuricurvum sp. RIFRC-1   2 1
No Yes Sulfuricurvum kujiense DSM 16994   2 1
No Yes Sulfurimonas autotrophica DSM 16294   2 2
No Yes Sulfurimonas denitrificans DSM 1251   3 3
No Yes Wolinella succinogenes DSM 1740   1 1
No Yes Nitratiruptor sp. SB155-2   4 2
No Yes Sulfurovum sp. NBC37-1   11 5
No Yes Desulfomonile tiedjei DSM 6799   2 2
No Yes Syntrophobacter fumaroxidans MPOB   3 1
No Yes Desulfurivibrio alkaliphilus AHT2   1 1
No Yes Desulfobulbus propionicus DSM 2032   2 1
No Yes Desulfococcus oleovorans Hxd3   3 1
No Yes Desulfohalobium retbaense DSM 5692   3 1
No Yes Desulfomicrobium baculatum DSM 4028   4 3
No Yes Desulfovibrio piezophilus   1 1
No Yes Desulfovibrio magneticus RS-1   3 2
No Yes Desulfovibrio alaskensis G20   1 1
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   4 2
No Yes Desulfovibrio africanus str. Walvis Bay   5 2
No Yes Geobacter daltonii FRC-32   10 4
No Yes Geobacter sp. M21   7 3
No Yes Geobacter uraniireducens Rf4   6 4
No Yes Geobacter lovleyi SZ   6 2
No Yes Geobacter bemidjiensis Bem   10 4
No Yes Geobacter sulfurreducens KN400   10 5
No Yes Geobacter metallireducens GS-15   16 7
No Yes Pelobacter carbinolicus DSM 2380   1 1
No Yes Haliangium ochraceum DSM 14365   6 4
No Yes Sorangium cellulosum 'So ce 56'   32 16
No Yes Anaeromyxobacter sp. Fw109-5   22 12
No Yes Anaeromyxobacter dehalogenans 2CP-1   15 10
No Yes Stigmatella aurantiaca DW4/3-1   17 10
No Yes Corallococcus coralloides DSM 2259   9 8
No Yes Myxococcus xanthus DK 1622   14 10
No Yes Myxococcus fulvus HW-1   6 6
No Yes Dechloromonas aromatica RCB   5 5
No Yes Thauera sp. MZ1T   7 6
No Yes Azoarcus sp. KH32C   13 10
No Yes Azoarcus sp. BH72   6 5
No Yes Aromatoleum aromaticum EbN1   7 7
No Yes Dechlorosoma suillum PS   5 4
No Yes Pseudogulbenkiania sp. NH8B   11 9
No Yes Laribacter hongkongensis HLHK9   7 3
No Yes Chromobacterium violaceum ATCC 12472   9 6
No Yes Neisseria meningitidis alpha14   3 2
No Yes Neisseria meningitidis FAM18   3 2
No Yes Neisseria lactamica 020-06   4 3
No Yes Neisseria gonorrhoeae NCCP11945   4 3
No Yes syncytium symbiont of Diaphorina citri   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   3 3
No Yes beta proteobacterium CB   4 3
No Yes Methylibium petroleiphilum PM1   9 7
No Yes Thiomonas arsenitoxydans   15 8
No Yes Thiomonas intermedia K12   12 7
No Yes Rubrivivax gelatinosus IL144   4 4
No Yes Leptothrix cholodnii SP-6   23 12
No Yes Burkholderia rhizoxinica HKI 454   4 3
No Yes Burkholderia phytofirmans PsJN   8 7
No Yes Burkholderia phymatum STM815   13 12
No Yes Burkholderia xenovorans LB400   16 11
No Yes Ralstonia eutropha JMP134   11 9
No Yes Cupriavidus taiwanensis LMG 19424   7 5
No Yes Cupriavidus metallidurans CH34   19 13
No Yes Cupriavidus necator N-1   11 9
No Yes Ralstonia eutropha H16   9 7
No Yes Ralstonia pickettii 12D   17 11
No Yes Ralstonia solanacearum CFBP2957   11 7
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   1 1
No Yes Burkholderia sp. RPE64   5 5
No Yes Burkholderia sp. CCGE1002   19 16
No Yes Burkholderia thailandensis E264   16 11
No Yes Burkholderia pseudomallei 1106a   19 14
No Yes Burkholderia mallei SAVP1   13 9
No Yes Burkholderia ambifaria AMMD   16 13
No Yes Burkholderia cenocepacia HI2424   12 9
No Yes Burkholderia multivorans ATCC 17616   16 11
No Yes Burkholderia vietnamiensis G4   17 12
No Yes Burkholderia gladioli BSR3   8 6
No Yes Burkholderia glumae BGR1   7 5
No Yes Verminephrobacter eiseniae EF01-2   3 3
No Yes Alicycliphilus denitrificans K601   16 11
No Yes Ramlibacter tataouinensis TTB310   10 7
No Yes Delftia sp. Cs1-4   11 8
No Yes Delftia acidovorans SPH-1   12 7
No Yes Polaromonas sp. JS666   9 6
No Yes Polaromonas naphthalenivorans CJ2   15 9
No Yes Variovorax paradoxus S110   10 9
No Yes Rhodoferax ferrireducens T118   3 3
No Yes Acidovorax ebreus TPSY   9 7
No Yes Acidovorax sp. KKS102   16 11
No Yes Acidovorax sp. JS42   15 10
No Yes Acidovorax citrulli AAC00-1   6 5
No Yes Acidovorax avenae subsp. avenae ATCC 19860   10 7
No Yes Comamonas testosteroni CNB-2   9 6
No Yes Candidatus Zinderia insecticola CARI   1 1
No Yes Herminiimonas arsenicoxydans   18 11
No Yes Collimonas fungivorans Ter331   7 6
No Yes Janthinobacterium sp. Marseille   11 7
No Yes Herbaspirillum seropedicae SmR1   7 6
No Yes Pusillimonas sp. T7-7   17 10
No Yes Advenella kashmirensis WT001   4 4
No Yes Taylorella asinigenitalis MCE3   3 2
No Yes Taylorella equigenitalis MCE9   3 2
No Yes Bordetella petrii DSM 12804   14 10
No Yes Bordetella avium 197N   2 2
No Yes Bordetella pertussis Tohama I   8 6
No Yes Bordetella parapertussis 12822   9 7
No Yes Bordetella bronchiseptica RB50   9 7
No Yes Achromobacter xylosoxidans A8   16 11
No Yes Achromobacter xylosoxidans   17 12
No Yes Thiobacillus denitrificans ATCC 25259   8 4
No Yes Nitrosospira multiformis ATCC 25196   17 11
No Yes Nitrosomonas sp. Is79A3   19 11
No Yes Nitrosomonas eutropha C91   29 16
No Yes Nitrosomonas europaea ATCC 19718   23 12
No Yes Sideroxydans lithotrophicus ES-1   6 4
No Yes Gallionella capsiferriformans ES-2   4 4
No Yes Methylotenera versatilis 301   11 8
No Yes Methylotenera mobilis JLW8   5 4
No Yes Methylovorus sp. MP688   5 4
No Yes Methylovorus glucosetrophus SIP3-4   5 4
No Yes Methylobacillus flagellatus KT   9 7
No Yes Parvularcula bermudensis HTCC2503   8 4
No Yes Asticcacaulis excentricus CB 48   8 4
No Yes Brevundimonas subvibrioides ATCC 15264   6 4
No Yes Caulobacter sp. K31   9 4
No Yes Caulobacter crescentus NA1000   5 3
No Yes Caulobacter segnis ATCC 21756   12 7
No Yes Phenylobacterium zucineum HLK1   17 9
No Yes Erythrobacter litoralis HTCC2594   10 4
No Yes Sphingopyxis alaskensis RB2256   11 5
No Yes Novosphingobium sp. PP1Y   10 6
No Yes Novosphingobium aromaticivorans DSM 12444   7 3
No Yes Sphingobium sp. SYK-6   14 6
No Yes Sphingobium japonicum UT26S   13 7
No Yes Sphingobium chlorophenolicum L-1   13 7
No Yes Sphingomonas sp. MM-1   14 6
No Yes Sphingomonas wittichii RW1   10 6
No Yes Maricaulis maris MCS10   8 5
No Yes Hirschia baltica ATCC 49814   4 2
No Yes Hyphomonas neptunium ATCC 15444   8 4
No Yes Dinoroseobacter shibae DFL 12   19 9
No Yes Phaeobacter gallaeciensis 2.10   10 5
No Yes Pseudovibrio sp. FO-BEG1   14 8
No Yes Jannaschia sp. CCS1   2 2
No Yes Ruegeria sp. TM1040   5 3
No Yes Ruegeria pomeroyi DSS-3   20 10
No Yes Ketogulonicigenium vulgare Y25   2 2
No Yes Ketogulonigenium vulgarum WSH-001   2 2
No Yes Roseobacter litoralis Och 149   12 7
No Yes Roseobacter denitrificans OCh 114   6 4
No Yes Rhodobacter sphaeroides ATCC 17029   5 5
No Yes Rhodobacter capsulatus SB 1003   5 3
No Yes Paracoccus denitrificans PD1222   7 7
No Yes Tistrella mobilis KA081020-065   16 8
No Yes Magnetospirillum magneticum AMB-1   6 6
No Yes Rhodospirillum centenum SW   3 3
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum lipoferum 4B   16 9
No Yes Azospirillum sp. B510   11 6
No Yes Azospirillum brasilense Sp245   14 9
No Yes Gluconacetobacter xylinus NBRC 3288   6 4
No Yes Granulibacter bethesdensis CGDNIH1   5 3
No Yes Gluconacetobacter diazotrophicus PAl 5   6 4
No Yes Acidiphilium multivorum AIU301   13 7
No Yes Acidiphilium cryptum JF-5   6 4
No Yes Gluconobacter oxydans 621H   4 2
No Yes Acetobacter pasteurianus IFO 3283-01   5 3
No Yes Polymorphum gilvum SL003B-26A1   5 3
No Yes Micavibrio aeruginosavorus ARL-13   4 2
No Yes Candidatus Puniceispirillum marinum IMCC1322   2 2
No Yes alpha proteobacterium HIMB5   1 1
No Yes alpha proteobacterium HIMB59   2 2
No Yes Candidatus Pelagibacter sp. IMCC9063   4 4
No Yes Neorickettsia sennetsu str. Miyayama   1 1
No Yes Neorickettsia risticii str. Illinois   1 1
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel   1 1
No Yes Wolbachia sp. wRi   1 1
No Yes Ehrlichia chaffeensis str. Arkansas   1 1
No Yes Ehrlichia canis str. Jake   1 1
No Yes Ehrlichia ruminantium str. Gardel   1 1
No Yes Anaplasma phagocytophilum HZ   1 1
No Yes Anaplasma marginale str. Florida   1 1
No Yes Anaplasma centrale str. Israel   1 1
No Yes Orientia tsutsugamushi str. Boryong   2 2
No Yes Rickettsia bellii OSU 85-389   2 2
No Yes Rickettsia canadensis str. McKiel   2 2
No Yes Rickettsia typhi str. Wilmington   1 1
No Yes Rickettsia prowazekii str. BuV67-CWPP   2 2
No Yes Rickettsia philipii str. 364D   2 2
No Yes Rickettsia heilongjiangensis 054   2 2
No Yes Rickettsia peacockii str. Rustic   2 2
No Yes Rickettsia felis URRWXCal2   2 2
No Yes Rickettsia slovaca 13-B   2 2
No Yes Rickettsia parkeri str. Portsmouth   2 2
No Yes Rickettsia massiliae MTU5   2 2
No Yes Rickettsia japonica YH   2 2
No Yes Rickettsia africae ESF-5   2 2
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   2 2
No Yes Rickettsia montanensis str. OSU 85-930   2 2
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   2 2
No Yes Rickettsia australis str. Cutlack   2 2
No Yes Rickettsia akari str. Hartford   2 2
No Yes Rickettsia rickettsii str. 'Sheila Smith'   2 2
No Yes Rickettsia conorii str. Malish 7   2 2
No Yes Starkeya novella DSM 506   13 8
No Yes Xanthobacter autotrophicus Py2   40 18
No Yes Azorhizobium caulinodans ORS 571   11 5
No Yes Methylobacterium chloromethanicum CM4   14 11
No Yes Methylobacterium extorquens AM1   22 14
No Yes Methylobacterium sp. 4-46   16 13
No Yes Methylobacterium populi BJ001   12 9
No Yes Methylobacterium nodulans ORS 2060   20 15
No Yes Methylobacterium radiotolerans JCM 2831   11 9
No Yes Parvibaculum lavamentivorans DS-1   9 6
No Yes Candidatus Hodgkinia cicadicola Dsem   1 1
No Yes Ochrobactrum anthropi ATCC 49188   16 10
No Yes Brucella microti CCM 4915   10 7
No Yes Brucella pinnipedialis B2/94   10 7
No Yes Brucella canis ATCC 23365   10 7
No Yes Brucella suis ATCC 23445   10 7
No Yes Brucella melitensis ATCC 23457   9 6
No Yes Brucella ovis ATCC 25840   9 6
No Yes Brucella abortus S19   10 7
No Yes Sinorhizobium fredii NGR234   29 19
No Yes Sinorhizobium medicae WSM419   22 14
No Yes Sinorhizobium meliloti AK83   16 11
No Yes Genome sequence of Rhizobium sp. strain IRBG74   11 9
No Yes Rhizobium etli CIAT 652   15 10
No Yes Rhizobium leguminosarum bv. viciae 3841   15 10
No Yes Agrobacterium tumefaciens str. C58   9 7
No Yes Agrobacterium radiobacter K84   10 7
No Yes Agrobacterium sp. H13-3   9 8
No Yes Agrobacterium vitis S4   14 9
No Yes Candidatus Liberibacter asiaticus str. psy62   1 1
No Yes Mesorhizobium sp. BNC1   23 16
No Yes Mesorhizobium opportunistum WSM2075   19 13
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   17 12
No Yes Mesorhizobium loti MAFF303099   14 10
No Yes Methylocella silvestris BL2   16 9
No Yes Beijerinckia indica subsp. indica ATCC 9039   8 5
No Yes Pelagibacterium halotolerans B2   6 4
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   14 10
No Yes Hyphomicrobium denitrificans ATCC 51888   13 9
No Yes Oligotropha carboxidovorans OM4   27 14
No Yes Rhodopseudomonas palustris BisA53   8 6
No Yes Nitrobacter winogradskyi Nb-255   12 7
No Yes Nitrobacter hamburgensis X14   21 14
No Yes Bradyrhizobium japonicum USDA 110   19 15
No Yes Bradyrhizobium sp. ORS 278   17 12
No Yes Methylocystis sp. SC2   22 14
No Yes Bartonella tribocorum CIP 105476   1 1
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella henselae str. Houston-1   1 1
No Yes Bartonella grahamii as4aup   1 1
No Yes Bartonella quintana str. Toulouse   1 1
No Yes Bartonella bacilliformis KC583   1 1
No Yes Saccharophagus degradans 2-40   9 5
No Yes Teredinibacter turnerae T7901   2 2
No Yes Cellvibrio japonicus Ueda107   8 5
No Yes Aggregatibacter aphrophilus NJ8700   3 1
No Yes Aggregatibacter actinomycetemcomitans D7S-1   3 1
No Yes Haemophilus somnus 129PT   3 1
No Yes Gallibacterium anatis UMN179   9 4
No Yes Pasteurella multocida subsp. multocida str. 3480   3 1
No Yes Haemophilus parasuis SH0165   3 1
No Yes Haemophilus ducreyi 35000HP   3 1
No Yes Haemophilus parainfluenzae T3T1   6 3
No Yes Haemophilus influenzae PittEE   3 1
No Yes Actinobacillus succinogenes 130Z   6 3
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   6 3
No Yes Oceanimonas sp. GK1   9 6
No Yes Tolumonas auensis DSM 9187   5 3
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   2 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   5 3
No Yes Aliivibrio salmonicida LFI1238   2 2
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   7 5
No Yes Vibrio harveyi ATCC BAA-1116   7 5
No Yes Vibrio parahaemolyticus RIMD 2210633   4 4
No Yes Vibrio splendidus LGP32   6 4
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   8 6
No Yes Vibrio vulnificus MO6-24/O   5 3
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   9 7
No Yes Psychromonas ingrahamii 37   4 4
No Yes Idiomarina loihiensis L2TR   9 6
No Yes Ferrimonas balearica DSM 9799   2 2
No Yes Shewanella piezotolerans WP3   6 6
No Yes Shewanella loihica PV-4   9 6
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella denitrificans OS217   9 6
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   3 3
No Yes Shewanella baltica OS185   5 5
No Yes Shewanella woodyi ATCC 51908   9 7
No Yes Shewanella sp. MR-4   5 5
No Yes Shewanella amazonensis SB2B   5 4
No Yes Shewanella violacea DSS12   4 4
No Yes Shewanella frigidimarina NCIMB 400   9 7
No Yes Shewanella putrefaciens CN-32   8 6
No Yes Colwellia psychrerythraea 34H   5 5
No Yes Pseudoalteromonas sp. SM9913   10 8
No Yes Pseudoalteromonas atlantica T6c   6 6
No Yes Pseudoalteromonas haloplanktis TAC125   9 6
No Yes Glaciecola sp. 4H-3-7+YE-5   13 9
No Yes Glaciecola nitratireducens FR1064   4 4
No Yes Marinobacter adhaerens HP15   7 5
No Yes Marinobacter sp. BSs20148   9 6
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   6 4
No Yes Marinobacter aquaeolei VT8   6 4
No Yes Alteromonas sp. SN2   11 9
No Yes Alteromonas macleodii str. 'Deep ecotype'   12 10
No Yes Kangiella koreensis DSM 16069   12 7
No Yes Hahella chejuensis KCTC 2396   7 6
No Yes Alcanivorax borkumensis SK2   10 6
No Yes Marinomonas posidonica IVIA-Po-181   3 3
No Yes Marinomonas sp. MWYL1   5 3
No Yes Marinomonas mediterranea MMB-1   6 4
No Yes Candidatus Carsonella ruddii PV   1 1
No Yes Chromohalobacter salexigens DSM 3043   1 1
No Yes Halomonas elongata DSM 2581   7 5
No Yes Methylomicrobium alcaliphilum   21 13
No Yes Methylomonas methanica MC09   16 9
No Yes Methylococcus capsulatus str. Bath   11 6
No Yes Dichelobacter nodosus VCS1703A   1 1
No Yes Rhodanobacter denitrificans   19 12
No Yes Frateuria aurantia DSM 6220   7 3
No Yes Pseudoxanthomonas spadix BD-a59   9 5
No Yes Pseudoxanthomonas suwonensis 11-1   9 6
No Yes Stenotrophomonas maltophilia K279a   10 6
No Yes Xylella fastidiosa M23   8 4
No Yes Xanthomonas axonopodis pv. citri str. 306   7 5
No Yes Xanthomonas albilineans GPE PC73   3 3
No Yes Xanthomonas oryzae pv. oryzae PXO99A   7 5
No Yes Xanthomonas campestris pv. campestris str. B100   7 5
No Yes Halothiobacillus neapolitanus c2   7 3
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   4 3
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   8 5
No Yes Thioalkalivibrio sp. K90mix   12 6
No Yes Nitrosococcus watsonii C-113   17 12
No Yes Nitrosococcus halophilus Nc4   27 18
No Yes Nitrosococcus oceani ATCC 19707   16 12
No Yes Coxiella burnetii Dugway 5J108-111   4 2
No Yes Legionella longbeachae NSW150   7 3
No Yes Legionella pneumophila str. Corby   7 3
No Yes Baumannia cicadellinicola str. Hc (Homalodisca coagulata)   1 1
No Yes gamma proteobacterium HdN1   5 4
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)   3 2
No Yes Candidatus Vesicomyosocius okutanii HA   4 2
No Yes Photorhabdus asymbiotica   7 3
No Yes Photorhabdus luminescens subsp. laumondii TTO1   7 3
No Yes Xenorhabdus bovienii SS-2004   4 2
No Yes Xenorhabdus nematophila ATCC 19061   4 2
No Yes Providencia stuartii MRSN 2154   8 4
No Yes Proteus mirabilis HI4320   8 4
No Yes Edwardsiella ictaluri 93-146   4 2
No Yes Edwardsiella tarda EIB202   3 1
No Yes Rahnella sp. Y9602   8 4
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   8 4
No Yes Yersinia pseudotuberculosis IP 31758   8 4
No Yes Yersinia pestis Pestoides F   8 4
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   8 4
No Yes Serratia sp. AS12   8 4
No Yes Serratia symbiotica str. 'Cinara cedri'   1 1
No Yes Serratia sp. ATCC 39006   8 4
No Yes Serratia plymuthica AS9   8 4
No Yes Serratia proteamaculans 568   8 4
No Yes Dickeya dadantii Ech703   8 4
No Yes Dickeya zeae Ech1591   11 5
No Yes Pectobacterium wasabiae WPP163   7 3
No Yes Pectobacterium sp. SCC3193   7 3
No Yes Pectobacterium atrosepticum SCRI1043   4 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   4 2
No Yes Sodalis glossinidius str. 'morsitans'   4 2
No Yes Halyomorpha halys symbiont   1 1
No Yes Pantoea sp. At-9b   7 3
No Yes Pantoea vagans C9-1   8 4
No Yes Pantoea ananatis LMG 20103   7 3
No Yes Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis   1 1
No Yes Buchnera aphidicola BCc   1 1
No Yes Erwinia tasmaniensis Et1/99   8 4
No Yes Erwinia sp. Ejp617   8 4
No Yes Erwinia billingiae Eb661   8 4
No Yes Erwinia pyrifoliae Ep1/96   8 4
No Yes Erwinia amylovora ATCC 49946   8 4
No Yes Escherichia blattae DSM 4481   8 4
No Yes Cronobacter turicensis z3032   10 5
No Yes Cronobacter sakazakii ES15   8 4
No Yes Candidatus Riesia pediculicola USDA   1 1
No Yes secondary endosymbiont of Ctenarytaina eucalypti   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   1 1
No Yes Candidatus Blochmannia floridanus   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   8 4
No Yes Shigella sonnei Ss046   8 4
No Yes Shigella flexneri 5 str. 8401   7 3
No Yes Shigella dysenteriae Sd197   7 3
No Yes Shigella boydii CDC 3083-94   7 3
No Yes Salmonella bongori NCTC 12419   7 3
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   7 3
No Yes Klebsiella oxytoca E718   8 4
No Yes Klebsiella variicola At-22   8 4
No Yes Klebsiella pneumoniae NTUH-K2044   11 5
No Yes Enterobacter aerogenes KCTC 2190   8 4
No Yes Escherichia fergusonii ATCC 35469   8 4
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   8 4
No Yes Enterobacter sp. R4-368   8 4
No Yes Enterobacter sp. 638   8 4
No Yes Enterobacter asburiae LF7a   7 3
No Yes Enterobacter cloacae subsp. dissolvens SDM   8 4
No Yes Citrobacter rodentium ICC168   8 4
No Yes Citrobacter koseri ATCC BAA-895   8 4
No Yes Azotobacter vinelandii DJ   8 4
No Yes Pseudomonas sp. TKP   21 13
No Yes Pseudomonas sp. UW4   16 9
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   13 9
No Yes Pseudomonas entomophila L48   18 9
No Yes Pseudomonas syringae pv. tomato str. DC3000   9 5
No Yes Pseudomonas stutzeri A1501   14 8
No Yes Pseudomonas fulva 12-X   9 7
No Yes Pseudomonas putida F1   17 9
No Yes Pseudomonas protegens Pf-5   13 8
No Yes Pseudomonas fluorescens SBW25   8 6
No Yes Pseudomonas mendocina ymp   15 10
No Yes Pseudomonas aeruginosa UCBPP-PA14   11 7
No Yes Pseudomonas sp. VLB120   18 9
No Yes Psychrobacter sp. G   3 1
No Yes Psychrobacter sp. PRwf-1   3 1
No Yes Psychrobacter arcticus 273-4   4 2
No Yes Psychrobacter cryohalolentis K5   3 1
No Yes Moraxella catarrhalis RH4   2 1
No Yes Acinetobacter oleivorans DR1   4 2
No Yes Acinetobacter calcoaceticus PHEA-2   4 2
No Yes Acinetobacter baumannii ATCC 17978   7 3
No Yes Acinetobacter sp. ADP1   4 2
No Yes Methylophaga sp. JAM1   10 7
No Yes Cycloclasticus sp. P1   6 4
No Yes Thiomicrospira crunogena XCL-2   13 5
No Yes Francisella noatunensis subsp. orientalis str. Toba 04   2 2
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   3 1
No Yes Francisella tularensis subsp. tularensis WY96-3418   1 1
No Yes Francisella cf. novicida 3523   1 1
No Yes Francisella novicida U112   1 1
No Yes Candidatus Caldiarchaeum subterraneum   14 10
No Yes Cenarchaeum symbiosum A   19 17
No Yes Candidatus Nitrosopumilus sp. AR2   37 24
No Yes Nitrosopumilus maritimus SCM1   37 27
No Yes Aeropyrum pernix K1   3 3
No Yes Metallosphaera cuprina Ar-4   7 7
No Yes Metallosphaera sedula DSM 5348   9 8
No Yes Acidianus hospitalis W1   3 3
No Yes Sulfolobus tokodaii str. 7   7 7
No Yes Sulfolobus islandicus Y.N.15.51   8 7
No Yes Sulfolobus solfataricus P2   5 5
No Yes Sulfolobus acidocaldarius DSM 639   5 5
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Caldivirga maquilingensis IC-167   3 3
No Yes Pyrobaculum sp. 1860   4 4
No Yes Pyrobaculum calidifontis JCM 11548   3 3
No Yes Pyrobaculum oguniense TE7   2 2
No Yes Pyrobaculum aerophilum str. IM2   5 3
No Yes Thermoproteus uzoniensis 768-20   1 1
No Yes halophilic archaeon DL31   16 14
No Yes Methanocella arvoryzae MRE50   3 3
No Yes Methanocella conradii HZ254   1 1
No Yes Methanocella paludicola SANAE   4 4
No Yes Methanosalsum zhilinae DSM 4017   4 4
No Yes Methanohalobium evestigatum Z-7303   2 2
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   8 7
No Yes Methanosarcina mazei Go1   6 6
No Yes Methanosarcina barkeri str. Fusaro   5 4
No Yes Methanohalophilus mahii DSM 5219   4 4
No Yes Methanosphaerula palustris E1-9c   6 4
No Yes Methanoregula boonei 6A8   6 6
No Yes Methanoculleus bourgensis MS2   5 5
No Yes Methanoculleus marisnigri JR1   4 4
No Yes Ferroglobus placidus DSM 10642   3 3
No Yes Archaeoglobus fulgidus DSM 4304   2 2
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Picrophilus torridus DSM 9790   2 2
No Yes Salinarchaeum sp. Harcht-Bsk1   25 20
No Yes Halopiger xanaduensis SH-6   23 15
No Yes Haloterrigena turkmenica DSM 5511   30 18
No Yes Natrinema sp. J7-2   18 15
No Yes Natrialba magadii ATCC 43099   8 8
No Yes Halorubrum lacusprofundi ATCC 49239   25 16
No Yes Haloquadratum walsbyi DSM 16790   4 4
No Yes Halogeometricum borinquense DSM 11551   31 23
No Yes Haloferax mediterranei ATCC 33500   30 23
No Yes Haloferax volcanii DS2   19 15
No Yes Halomicrobium mukohataei DSM 12286   18 14
No Yes Halorhabdus utahensis DSM 12940   8 7
No Yes Natronomonas pharaonis DSM 2160   12 11
No Yes Haloarcula hispanica ATCC 33960   20 16
No Yes Haloarcula marismortui ATCC 43049   26 21
No Yes Halalkalicoccus jeotgali B3   16 8
No Yes Halobacterium salinarum R1   14 11
No Yes Halobacterium sp. NRC-1   13 11
No Yes Methanococcus maripaludis C5   1 1
No Yes Methanococcus vannielii SB   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 46 27
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 32 14
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 19 8
No Yes Ascaris suum Victoria/Ghent Pig roundworm 5 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 8 6
No Yes Cryptococcus neoformans var. grubii H99   15 5
No Yes Cryptococcus neoformans B-3501A   15 5
No Yes Cryptococcus neoformans JEC21   15 5
No Yes Paracoccidioides brasiliensis Pb01   16 9
No Yes Paracoccidioides brasiliensis Pb03   14 7
No Yes Coccidioides posadasii str. Silveira   12 8
No Yes Coccidioides immitis RMSCC 3703   13 9
No Yes Coccidioides immitis RMSCC 2394   13 8
No Yes Coccidioides immitis H538.4   11 8
No Yes Ajellomyces dermatitidis ER-3   14 8
No Yes Histoplasma capsulatum H143   18 11
No Yes Histoplasma capsulatum H88   18 9
No Yes Histoplasma capsulatum G186AR   18 9
No Yes Aspergillus fumigatus A1163   20 9
No Yes Candida albicans WO-1   12 4
No Yes Saccharomyces cerevisiae UC5   9 3
No Yes Saccharomyces cerevisiae PW5   9 3
No Yes Saccharomyces cerevisiae FL100   4 2
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   6 2
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   9 3
No Yes Saccharomyces cerevisiae FostersB   8 3
No Yes Saccharomyces cerevisiae FostersO   6 2
No Yes Saccharomyces cerevisiae VL3   8 3
No Yes Saccharomyces cerevisiae Vin13   9 3
No Yes Saccharomyces cerevisiae LalvinQA23   9 3
No Yes Saccharomyces cerevisiae AWRI796   9 3
No Yes Saccharomyces cerevisiae Sigma1278b   9 3
No Yes Saccharomyces cerevisiae W303   9 3
No Yes Saccharomyces cerevisiae JAY291   9 3
No Yes Saccharomyces cerevisiae AWRI1631   6 2
No Yes Saccharomyces cerevisiae M22   3 1
No Yes Saccharomyces cerevisiae T73   6 2
No Yes Saccharomyces cerevisiae CLIB215   3 1
No Yes Saccharomyces cerevisiae Y10   2 1
No Yes Saccharomyces cerevisiae YJM789   10 4
No Yes Saccharomyces cerevisiae YJM789   9 3
No Yes Saccharomyces cerevisiae RM11-1a   9 3
No Yes Saccharomyces cerevisiae RM11-1a   9 3
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 10 4
No Yes Schizosaccharomyces pombe 972h-   3 1
No Yes Batrachochytrium dendrobatidis JEL423   11 5
No Yes Batrachochytrium dendrobatidis JAM81   13 5
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 203 111
No Yes Hordeum vulgare 22 Domesticated barley 271 143
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 205 118
No Yes Trypanosoma brucei Lister 427 v4.1   3 1
No Yes Neospora caninum Nc-Liverpool 6.2   1 1
No Yes Plasmodium falciparum HB3   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   18 11
No Yes Chamaesiphon minutus PCC 6605   15 8
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   3 3
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   3 3
No Yes Synechocystis sp. PCC 6803 substr. GT-I   3 3
No Yes Synechocystis sp. PCC 6803   3 3
No Yes Cyanobium gracile PCC 6307   6 4
No Yes Dactylococcopsis salina PCC 8305   4 4
No Yes Synechococcus sp. JA-2-3B'a(2-13)   4 4
No Yes Synechococcus sp. JA-3-3Ab   3 3
No Yes Synechococcus sp. CC9902   5 3
No Yes Synechococcus sp. RCC307   5 3
No Yes Synechococcus sp. CC9605   3 3
No Yes Synechococcus sp. WH 8102   3 3
No Yes Synechococcus sp. WH 7803   9 5
No Yes Synechococcus sp. PCC 7002   8 5
No Yes Synechococcus elongatus PCC 6301   4 4
No Yes Prochlorococcus marinus str. NATL1A   2 2
No Yes Prochlorococcus marinus str. MIT 9301   2 2
No Yes Prochlorococcus marinus str. AS9601   2 2
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   2 2
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   3 3
No Yes Prochlorococcus marinus str. MIT 9215   3 3
No Yes Prochlorococcus marinus str. MIT 9211   2 2
No Yes Prochlorococcus marinus str. MIT 9313   2 2
No Yes Prochlorococcus marinus str. MIT 9312   2 2
No Yes Prochlorococcus marinus str. MIT 9303   5 3
No Yes Prochlorococcus marinus str. NATL2A   2 2
No Yes Crinalium epipsammum PCC 9333   6 3
No Yes Oscillatoria nigro-viridis PCC 7112   10 7
No Yes Oscillatoria acuminata PCC 6304   2 2
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   20 11
No Yes Cyanothece sp. PCC 7425   6 5
No Yes Cyanothece sp. PCC 7424   14 9
No Yes Cyanothece sp. ATCC 51142   11 8
No Yes Cyanothece sp. PCC 8801   13 6
No Yes Cyanobacterium aponinum PCC 10605   10 5
No Yes Cyanobacterium stanieri PCC 7202   6 4
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   16 13
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   8 6
No Yes Stanieria cyanosphaera PCC 7437   24 12
No Yes Calothrix parietina Calothrix sp. PCC 6303   8 7
No Yes Cylindrospermum stagnale PCC 7417   6 5
No Yes Anabaena cylindrica PCC 7122   9 7
No Yes Frankia sp. EuI1c   3 3
No Yes Frankia sp. CcI3   5 4
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   7 4
No Yes Streptomyces rapamycinicus NRRL 5491   10 5
No Yes Streptomyces davawensis JCM 4913   9 6
No Yes Streptomyces fulvissimus DSM 40593   7 4
No Yes Streptomyces venezuelae ATCC 10712   9 5
No Yes Streptomyces collinus Tu 365   5 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   8 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   14 8
No Yes Saccharothrix espanaensis DSM 44229   7 5
No Yes Amycolatopsis mediterranei RB   8 5
No Yes Amycolatopsis mediterranei S699   8 5
No Yes Amycolatopsis mediterranei S699   8 5
No Yes Amycolatopsis orientalis HCCB10007   13 7
No Yes Propionibacterium avidum 44067   4 2
No Yes Propionibacterium acnes ATCC 11828   4 2
No Yes Propionibacterium acnes TypeIA2 P.acn31   4 2
No Yes Propionibacterium acnes TypeIA2 P.acn17   4 2
No Yes Propionibacterium acnes TypeIA2 P.acn33   4 2
No Yes Propionibacterium acnes C1   4 2
No Yes Propionibacterium acnes HL096PA1   4 2
No Yes Propionibacterium acnes 6609   4 2
No Yes Propionibacterium acnes 266   4 2
No Yes Propionibacterium acnes KPA171202   4 2
No Yes Propionibacterium acidipropionici ATCC 4875   10 4
No Yes Actinoplanes friuliensis DSM 7358   10 5
No Yes Rhodococcus pyridinivorans SB3094   9 5
No Yes Rhodococcus erythropolis CCM2595   24 12
No Yes Nocardia brasiliensis ATCC 700358   8 4
No Yes Mycobacterium sp. MOTT36Y   12 6
No Yes Mycobacterium sp. JDM601   4 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   8 6
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium sp. KMS   6 4
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium yongonense 05-1390   12 6
No Yes Mycobacterium intracellulare MOTT-64   12 6
No Yes Mycobacterium indicus pranii MTCC 9506   15 7
No Yes Mycobacterium intracellulare MOTT-02   9 5
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   9 5
No Yes Mycobacterium avium subsp. paratuberculosis K-10   9 5
No Yes Mycobacterium canettii CIPT 140070017   4 2
No Yes Mycobacterium canettii CIPT 140060008   4 2
No Yes Mycobacterium canettii CIPT 140070008   4 2
No Yes Mycobacterium canettii CIPT 140070010   4 2
No Yes Mycobacterium tuberculosis EAI5/NITR206   4 2
No Yes Mycobacterium tuberculosis EAI5   4 2
No Yes Mycobacterium tuberculosis CAS/NITR204   4 2
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   4 2
No Yes Mycobacterium tuberculosis UT205   4 2
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   3 1
No Yes Mycobacterium tuberculosis CTRI-2   4 2
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   4 2
No Yes Mycobacterium tuberculosis KZN 605   4 2
No Yes Mycobacterium tuberculosis KZN 4207   4 2
No Yes Mycobacterium tuberculosis CCDC5180   4 2
No Yes Mycobacterium tuberculosis CCDC5079   4 2
No Yes Mycobacterium tuberculosis CCDC5079   4 2
No Yes Mycobacterium tuberculosis H37Ra   4 2
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   4 2
No Yes Mycobacterium tuberculosis str. Haarlem   4 2
No Yes Mycobacterium tuberculosis F11   4 2
No Yes Mycobacterium tuberculosis H37Rv   4 2
No Yes Mycobacterium tuberculosis CDC1551   4 2
No Yes Mycobacterium bovis AF2122/97   4 2
No Yes Mycobacterium bovis BCG str. Korea 1168P   4 2
No Yes Mycobacterium bovis BCG str. Mexico   4 2
No Yes Mycobacterium bovis BCG str. Tokyo 172   4 2
No Yes Mycobacterium gilvum Spyr1   10 4
No Yes Mycobacterium smegmatis str. MC2 155   3 3
No Yes Mycobacterium leprae TN   1 1
No Yes Mycobacterium kansasii ATCC 12478   11 5
No Yes Corynebacterium maris DSM 45190   5 3
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   7 3
No Yes Corynebacterium terpenotabidum Y-11   1 1
No Yes Corynebacterium ulcerans BR-AD22   4 2
No Yes Corynebacterium ulcerans 809   4 2
No Yes Corynebacterium urealyticum DSM 7111   7 3
No Yes Corynebacterium argentoratense DSM 44202   1 1
No Yes Corynebacterium callunae DSM 20147   9 5
No Yes Corynebacterium pseudotuberculosis 258   4 2
No Yes Corynebacterium pseudotuberculosis Cp162   7 3
No Yes Corynebacterium pseudotuberculosis P54B96   7 3
No Yes Corynebacterium pseudotuberculosis 267   7 3
No Yes Corynebacterium pseudotuberculosis 1/06-A   4 2
No Yes Corynebacterium pseudotuberculosis 42/02-A   7 3
No Yes Corynebacterium pseudotuberculosis 3/99-5   7 3
No Yes Corynebacterium pseudotuberculosis 31   4 2
No Yes Corynebacterium pseudotuberculosis CIP 52.97   4 2
No Yes Corynebacterium pseudotuberculosis PAT10   7 3
No Yes Corynebacterium pseudotuberculosis I19   7 3
No Yes Corynebacterium pseudotuberculosis FRC41   7 3
No Yes Corynebacterium pseudotuberculosis C231   7 3
No Yes Corynebacterium pseudotuberculosis 1002   7 3
No Yes Corynebacterium glutamicum MB001   8 4
No Yes Corynebacterium glutamicum SCgG2   8 4
No Yes Corynebacterium glutamicum SCgG1   8 4
No Yes Corynebacterium glutamicum ATCC 13032   8 4
No Yes Corynebacterium glutamicum ATCC 13032   8 4
No Yes Corynebacterium glutamicum ATCC 13032   8 4
No Yes Corynebacterium diphtheriae BH8   4 2
No Yes Corynebacterium diphtheriae INCA 402   4 2
No Yes Corynebacterium diphtheriae VA01   4 2
No Yes Corynebacterium diphtheriae HC04   4 2
No Yes Corynebacterium diphtheriae HC03   1 1
No Yes Corynebacterium diphtheriae HC02   7 3
No Yes Corynebacterium diphtheriae HC01   4 2
No Yes Corynebacterium diphtheriae 241   4 2
No Yes Corynebacterium diphtheriae CDCE 8392   4 2
No Yes Corynebacterium diphtheriae PW8   6 3
No Yes Corynebacterium diphtheriae C7 (beta)   4 2
No Yes Corynebacterium diphtheriae 31A   7 3
No Yes Tropheryma whipplei str. Twist   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   1 1
No Yes Clavibacter michiganensis subsp. sepedonicus   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. longum KACC 91563   1 1
No Yes Bifidobacterium longum subsp. longum BBMN68   1 1
No Yes Bifidobacterium longum subsp. longum F8   1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   1 1
No Yes Bifidobacterium thermophilum RBL67   1 1
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl12   1 1
No Yes Bifidobacterium animalis subsp. lactis B420   1 1
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   1 1
No Yes Bifidobacterium animalis subsp. lactis BLC1   1 1
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   1 1
No Yes Bifidobacterium animalis subsp. lactis Bi-07   1 1
No Yes Bifidobacterium animalis subsp. lactis V9   1 1
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   1 1
No Yes Bifidobacterium animalis subsp. lactis BB-12   1 1
No Yes Bifidobacterium animalis subsp. lactis AD011   1 1
No Yes Bifidobacterium breve UCC2003   1 1
No Yes Bifidobacterium asteroides PRL2011   4 2
No Yes Bifidobacterium bifidum PRL2010   1 1
No Yes Bifidobacterium bifidum BGN4   1 1
No Yes Actinomyces graevenitzii C83   3 1
No Yes Actinomyces odontolyticus ATCC 17982   3 1
No Yes Actinomyces viscosus C505   6 2
No Yes Chthonomonas calidirosea T49   3 2
No Yes Deinococcus peraridilitoris DSM 19664   7 5
No Yes Thermus oshimai JL-2   8 4
No Yes Thermus thermophilus JL-18   5 3
No Yes Thermus thermophilus SG0.5JP17-16   5 3
No Yes Thermus thermophilus HB8   2 2
No Yes Sulfobacillus acidophilus TPY   8 7
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   6 3
No Yes Clostridium saccharobutylicum DSM 13864   3 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   7 3
No Yes Clostridium pasteurianum BC1   10 4
No Yes Clostridium botulinum BKT015925   3 1
No Yes Clostridium botulinum F str. 230613   2 1
No Yes Clostridium botulinum F str. Langeland   2 1
No Yes Clostridium botulinum A str. Hall   3 1
No Yes Clostridium botulinum A str. ATCC 19397   3 1
No Yes Thermacetogenium phaeum DSM 12270   6 3
No Yes Carnobacterium maltaromaticum LMA28   3 1
No Yes Enterococcus faecium NRRL B-2354   3 1
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   2 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   2 1
No Yes Lactobacillus casei LOCK919   2 1
No Yes Lactobacillus casei W56   2 1
No Yes Lactobacillus casei LC2W   2 1
No Yes Lactobacillus casei BD-II   2 1
No Yes Lactobacillus casei BL23   2 1
No Yes Lactobacillus casei str. Zhang   2 1
No Yes Lactobacillus rhamnosus LOCK908   3 1
No Yes Lactobacillus rhamnosus LOCK900   3 1
No Yes Lactobacillus rhamnosus ATCC 8530   3 1
No Yes Lactobacillus rhamnosus GG   3 1
No Yes Lactobacillus rhamnosus GG   3 1
No Yes Lactobacillus johnsonii N6.2   2 2
No Yes Lactobacillus johnsonii DPC 6026   2 2
No Yes Lactobacillus johnsonii NCC 533   2 2
No Yes Lactobacillus salivarius UCC118   2 2
No Yes Lactobacillus fermentum F-6   5 3
No Yes Lactobacillus fermentum CECT 5716   3 1
No Yes Lactobacillus amylovorus GRL 1112   5 3
No Yes Lactobacillus reuteri TD1   2 2
No Yes Lactobacillus reuteri I5007   2 2
No Yes Lactobacillus reuteri JCM 1112   2 2
No Yes Lactobacillus reuteri SD2112   1 1
No Yes Lactobacillus plantarum 16   5 3
No Yes Lactobacillus plantarum ZJ316   5 3
No Yes Lactobacillus plantarum subsp. plantarum ST-III   4 2
No Yes Lactobacillus plantarum subsp. plantarum P-8   7 4
No Yes Lactobacillus plantarum WCFS1   5 3
No Yes Lactobacillus helveticus R0052   2 2
No Yes Lactobacillus helveticus H10   2 2
No Yes Lactobacillus helveticus CNRZ32   2 2
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   3 2
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   4 2
No Yes Lactobacillus brevis KB290   3 2
No Yes Lactobacillus acidophilus La-14   2 2
No Yes Lactobacillus acidophilus NCFM   2 2
No Yes Lactococcus lactis subsp. cremoris SK11   3 1
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus pneumoniae A026   2 2
No Yes Streptococcus pneumoniae ST556   2 2
No Yes Streptococcus pneumoniae SPNA45   2 2
No Yes Streptococcus pneumoniae SPN994039   2 2
No Yes Streptococcus pneumoniae SPN994038   2 2
No Yes Streptococcus pneumoniae SPN034183   2 2
No Yes Streptococcus pneumoniae SPN034156   2 2
No Yes Streptococcus pneumoniae INV104   2 2
No Yes Streptococcus pneumoniae INV200   2 2
No Yes Streptococcus pneumoniae OXC141   2 2
No Yes Streptococcus pneumoniae gamPNI0373   2 2
No Yes Streptococcus pneumoniae AP200   2 2
No Yes Streptococcus pneumoniae ATCC 700669   2 2
No Yes Streptococcus pneumoniae TCH8431/19A   2 2
No Yes Streptococcus pneumoniae CGSP14   2 2
No Yes Streptococcus pneumoniae G54   1 1
No Yes Streptococcus pneumoniae JJA   2 2
No Yes Streptococcus pneumoniae 70585   2 2
No Yes Streptococcus pneumoniae Hungary19A-6   2 2
No Yes Streptococcus pneumoniae Taiwan19F-14   2 2
No Yes Streptococcus pneumoniae D39   2 2
No Yes Streptococcus pneumoniae 670-6B   1 1
No Yes Streptococcus pneumoniae R6   2 2
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Exiguobacterium antarcticum B7   2 2
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   10 6
No Yes Thermobacillus composti KWC4   9 7
No Yes Paenibacillus sp. Y412MC10   3 3
No Yes Paenibacillus mucilaginosus KNP414   11 7
No Yes Paenibacillus mucilaginosus K02   11 7
No Yes Paenibacillus larvae subsp. larvae DSM 25430   5 5
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   2 2
No Yes Paenibacillus polymyxa E681   5 3
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   3 2
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   3 2
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   3 2
No Yes Listeria monocytogenes 08-5578   4 3
No Yes Listeria monocytogenes 08-5923   1 1
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   1 1
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Geobacillus sp. C56-T3   9 6
No Yes Geobacillus sp. Y4.1MC1   5 4
No Yes Geobacillus sp. Y412MC52   6 5
No Yes Geobacillus sp. Y412MC61   6 5
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   5 3
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   5 3
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   5 3
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   5 3
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   5 3
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   5 3
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   5 3
No Yes Bacillus amyloliquefaciens LFB112   5 3
No Yes Bacillus amyloliquefaciens CC178   5 3
No Yes Bacillus amyloliquefaciens Y2   5 3
No Yes Bacillus amyloliquefaciens IT-45   5 3
No Yes Bacillus amyloliquefaciens XH7   5 3
No Yes Bacillus amyloliquefaciens LL3   5 3
No Yes Bacillus amyloliquefaciens TA208   5 3
No Yes Bacillus amyloliquefaciens DSM 7   5 3
No Yes Bacillus licheniformis 9945A   5 3
No Yes Bacillus subtilis PY79   5 3
No Yes Bacillus subtilis XF-1   5 3
No Yes Bacillus subtilis QB928   5 3
No Yes Bacillus subtilis BSn5   5 3
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   5 3
No Yes Bacillus subtilis subsp. subtilis str. BSP1   5 3
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   2 2
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   5 3
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   2 2
No Yes Bacillus subtilis subsp. spizizenii str. W23   5 3
No Yes Bacillus subtilis subsp. natto BEST195   5 3
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   5 3
No Yes Bacillus infantis NRRL B-14911   4 4
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   2 2
No Yes Bacillus toyonensis BCT-7112   9 5
No Yes Bacillus thuringiensis HD-771   6 4
No Yes Bacillus thuringiensis HD-789   6 4
No Yes Bacillus thuringiensis MC28   6 4
No Yes Bacillus thuringiensis serovar chinensis CT-43   6 4
No Yes Bacillus thuringiensis YBT-1518   6 4
No Yes Bacillus thuringiensis Bt407   6 4
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   6 4
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   6 4
No Yes Bacillus thuringiensis BMB171   8 4
No Yes Bacillus thuringiensis serovar finitimus YBT-020   3 3
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   6 4
No Yes Bacillus cereus FRI-35   3 3
No Yes Bacillus cereus biovar anthracis str. CI   3 3
No Yes Bacillus cereus AH820   9 5
No Yes Bacillus cereus AH187   3 3
No Yes Bacillus cereus B4264   6 4
No Yes Bacillus cereus G9842   6 4
No Yes Bacillus cereus Q1   2 2
No Yes Bacillus cereus F837/76   6 4
No Yes Bacillus cereus NC7401   3 3
No Yes Bacillus cereus E33L   3 3
No Yes Bacillus cereus ATCC 14579   6 4
No Yes Bacillus cereus ATCC 10987   6 4
No Yes Bacillus anthracis str. H9401   6 4
No Yes Bacillus anthracis str. CDC 684   6 5
No Yes Bacillus anthracis str. 'Ames Ancestor'   6 4
No Yes Bacillus anthracis str. Sterne   6 4
No Yes Bacillus anthracis str. Ames   6 4
No Yes Bacillus megaterium WSH-002   4 4
No Yes Bacillus megaterium QM B1551   4 4
No Yes Bacillus coagulans 36D1   10 5
No Yes Staphylococcus aureus subsp. aureus MSHR1132   1 1
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Staphylococcus lugdunensis N920143   1 1
No Yes Staphylococcus warneri SG1   1 1
No Yes Staphylococcus epidermidis ATCC 12228   4 2
No Yes Staphylococcus aureus CA-347   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus M1   1 1
No Yes Staphylococcus aureus 08BA02176   1 1
No Yes Staphylococcus aureus ST228/18412   1 1
No Yes Staphylococcus aureus ST228/18341   1 1
No Yes Staphylococcus aureus ST228/16125   1 1
No Yes Staphylococcus aureus ST228/16035   1 1
No Yes Staphylococcus aureus ST228/15532   1 1
No Yes Staphylococcus aureus ST228/10497   1 1
No Yes Staphylococcus aureus ST228/10388   1 1
No Yes Staphylococcus aureus 04-02981   1 1
No Yes Staphylococcus aureus RF122   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus 6850   1 1
No Yes Staphylococcus aureus subsp. aureus SA957   1 1
No Yes Staphylococcus aureus subsp. aureus CN1   1 1
No Yes Staphylococcus aureus subsp. aureus SA40   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus M013   1 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   1 1
No Yes Staphylococcus aureus subsp. aureus VC40   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   1 1
No Yes Staphylococcus aureus subsp. aureus LGA251   1 1
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   1 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   1 1
No Yes Staphylococcus aureus subsp. aureus ED133   1 1
No Yes Staphylococcus aureus subsp. aureus ED98   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   1 1
No Yes Staphylococcus aureus subsp. aureus TCH60   1 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   1 1
No Yes Staphylococcus aureus subsp. aureus 71193   1 1
No Yes Staphylococcus aureus subsp. aureus S0385   1 1
No Yes Staphylococcus aureus subsp. aureus str. Newman   1 1
No Yes Staphylococcus aureus subsp. aureus Mu3   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   1 1
No Yes Staphylococcus aureus subsp. aureus JH9   1 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   1 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   4 2
No Yes Staphylococcus aureus subsp. aureus MW2   1 1
No Yes Staphylococcus aureus subsp. aureus N315   1 1
No Yes Staphylococcus aureus subsp. aureus Mu50   1 1
No Yes Staphylococcus aureus subsp. aureus COL   1 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   1 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Salinibacter ruber DSM 13855   5 5
No Yes Rhodothermus marinus SG0.5JP17-172   10 7
No Yes Echinicola vietnamensis DSM 17526   7 3
No Yes Emticicia oligotrophica DSM 17448   7 5
No Yes Nonlabens dokdonensis DSW-6   4 2
No Yes Psychroflexus torquis ATCC 700755   4 4
No Yes Riemerella anatipestifer RA-CH-2   4 2
No Yes Riemerella anatipestifer RA-CH-1   1 1
No Yes Riemerella anatipestifer RA-GD   4 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   4 2
No Yes Singulisphaera acidiphila DSM 18658   12 10
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   5 4
No Yes Leptospira interrogans serovar Lai str. 56601   5 4
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   5 4
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   7 5
No Yes Hydrogenobacter thermophilus TK-6   6 6
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   4 4
No Yes Bdellovibrio exovorus JSS   2 2
No Yes Bdellovibrio bacteriovorus str. Tiberius   5 4
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   3 1
No Yes Campylobacter jejuni RM1221   3 1
No Yes Campylobacter jejuni subsp. jejuni 00-2544   3 1
No Yes Campylobacter jejuni subsp. jejuni 00-2538   3 1
No Yes Campylobacter jejuni subsp. jejuni 00-2426   3 1
No Yes Campylobacter jejuni subsp. jejuni 00-2425   3 1
No Yes Campylobacter jejuni subsp. jejuni PT14   3 1
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   3 1
No Yes Campylobacter jejuni subsp. jejuni S3   3 1
No Yes Campylobacter jejuni subsp. jejuni M1   3 1
No Yes Campylobacter jejuni subsp. jejuni IA3902   3 1
No Yes Campylobacter jejuni subsp. jejuni 81116   3 1
No Yes Campylobacter jejuni subsp. jejuni 81-176   3 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   3 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   3 1
No Yes Campylobacter coli 15-537360   3 1
No Yes Campylobacter coli CVM N29710   3 1
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Desulfovibrio vulgaris RCH1   4 2
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   7 3
No Yes Desulfovibrio vulgaris str. Hildenborough   4 2
No Yes Desulfovibrio desulfuricans ND132   1 1
No Yes Geobacter sp. M18   4 2
No Yes Geobacter sulfurreducens PCA   11 5
No Yes Sorangium cellulosum So0157-2   32 15
No Yes Anaeromyxobacter sp. K   13 9
No Yes Anaeromyxobacter dehalogenans 2CP-C   13 9
No Yes Myxococcus stipitatus DSM 14675   14 10
No Yes Neisseria meningitidis WUE 2594   3 2
No Yes Neisseria meningitidis G2136   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   3 2
No Yes Neisseria meningitidis NZ-05/33   3 2
No Yes Neisseria meningitidis M01-240355   3 2
No Yes Neisseria meningitidis 8013   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   3 2
No Yes Neisseria meningitidis H44/76   3 2
No Yes Neisseria meningitidis alpha710   3 2
No Yes Neisseria meningitidis MC58   3 2
No Yes Neisseria gonorrhoeae TCDC-NG08107   3 2
No Yes Neisseria gonorrhoeae FA 1090   3 2
No Yes Candidatus Nasuia deltocephalinicola str. NAS-ALF   1 1
No Yes Burkholderia phenoliruptrix BR3459a   10 9
No Yes Pandoraea pnomenusa 3kgm   9 8
No Yes Ralstonia pickettii 12J   23 13
No Yes Ralstonia solanacearum FQY_4   18 11
No Yes Ralstonia solanacearum Po82   17 9
No Yes Ralstonia solanacearum PSI07   12 7
No Yes Ralstonia solanacearum CMR15   18 11
No Yes Ralstonia solanacearum GMI1000   18 11
No Yes Polynucleobacter necessarius subsp. necessarius STIR1   1 1
No Yes Burkholderia sp. YI23   10 9
No Yes Burkholderia sp. CCGE1003   8 7
No Yes Burkholderia sp. CCGE1001   10 9
No Yes Burkholderia sp. KJ006   13 10
No Yes Burkholderia thailandensis MSMB121   12 9
No Yes Burkholderia pseudomallei MSHR305   19 14
No Yes Burkholderia pseudomallei NCTC 13179   18 13
No Yes Burkholderia pseudomallei BPC006   20 15
No Yes Burkholderia pseudomallei 1026b   19 14
No Yes Burkholderia pseudomallei MSHR346   9 7
No Yes Burkholderia pseudomallei 668   19 14
No Yes Burkholderia pseudomallei 1710b   19 14
No Yes Burkholderia pseudomallei K96243   19 14
No Yes Burkholderia mallei NCTC 10229   13 9
No Yes Burkholderia mallei NCTC 10247   13 9
No Yes Burkholderia mallei ATCC 23344   14 10
No Yes Burkholderia lata   13 10
No Yes Burkholderia ambifaria MC40-6   16 13
No Yes Burkholderia cenocepacia MC0-3   12 9
No Yes Burkholderia cenocepacia AU 1054   12 9
No Yes Burkholderia cenocepacia J2315   12 9
No Yes Burkholderia multivorans ATCC 17616   16 11
No Yes Burkholderia cepacia GG4   18 13
No Yes Alicycliphilus denitrificans BC   13 9
No Yes Variovorax paradoxus B4   7 6
No Yes Variovorax paradoxus EPS   7 6
No Yes Taylorella asinigenitalis 14/45   3 2
No Yes Taylorella equigenitalis 14/56   3 2
No Yes Taylorella equigenitalis ATCC 35865   3 2
No Yes Bordetella pertussis CS   8 6
No Yes Bordetella parapertussis 18323   7 5
No Yes Bordetella parapertussis Bpp5   9 7
No Yes Bordetella bronchiseptica MO149   9 7
No Yes Bordetella bronchiseptica 253   9 7
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   14 11
No Yes Nitrosomonas sp. AL212   24 13
No Yes Sulfuricella denitrificans skB26   7 5
No Yes Caulobacter crescentus CB15   5 3
No Yes Phaeobacter gallaeciensis DSM 17395   6 3
No Yes Phaeobacter gallaeciensis DSM 26640   18 10
No Yes Leisingera methylohalidivorans DSM 14336   5 5
No Yes Octadecabacter antarcticus 307   5 4
No Yes Octadecabacter arcticus 238   5 5
No Yes Rhodobacter sphaeroides KD131   9 8
No Yes Rhodobacter sphaeroides ATCC 17025   8 7
No Yes Rhodobacter sphaeroides 2.4.1   5 5
No Yes Paracoccus aminophilus JCM 7686   7 5
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   3 3
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   6 4
No Yes Gluconobacter oxydans H24   5 3
No Yes Acetobacter pasteurianus 386B   5 3
No Yes Acetobacter pasteurianus IFO 3283-12   5 3
No Yes Acetobacter pasteurianus IFO 3283-01-42C   5 3
No Yes Acetobacter pasteurianus IFO 3283-32   5 3
No Yes Acetobacter pasteurianus IFO 3283-26   5 3
No Yes Acetobacter pasteurianus IFO 3283-22   5 3
No Yes Acetobacter pasteurianus IFO 3283-07   5 3
No Yes Acetobacter pasteurianus IFO 3283-03   5 3
No Yes Micavibrio aeruginosavorus EPB   1 1
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Wolbachia endosymbiont of Drosophila melanogaster   1 1
No Yes Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon   1 1
No Yes Wolbachia endosymbiont strain TRS of Brugia malayi   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wHa   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wNo   1 1
No Yes Ehrlichia muris AS145   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Anaplasma phagocytophilum str. Dog2   1 1
No Yes Anaplasma phagocytophilum str. HZ2   1 1
No Yes Anaplasma phagocytophilum str. JM   1 1
No Yes Anaplasma marginale str. Dawn   1 1
No Yes Anaplasma marginale str. Gypsy Plains   1 1
No Yes Anaplasma marginale str. St. Maries   1 1
No Yes Orientia tsutsugamushi str. Ikeda   2 2
No Yes Rickettsia bellii RML369-C   2 2
No Yes Rickettsia canadensis str. CA410   2 2
No Yes Rickettsia typhi str. B9991CWPP   2 2
No Yes Rickettsia typhi str. TH1527   2 2
No Yes Rickettsia prowazekii str. Breinl   2 2
No Yes Rickettsia prowazekii str. NMRC Madrid E   2 2
No Yes Rickettsia prowazekii str. RpGvF24   2 2
No Yes Rickettsia prowazekii str. GvV257   2 2
No Yes Rickettsia prowazekii str. Dachau   2 2
No Yes Rickettsia prowazekii str. Katsinyian   2 2
No Yes Rickettsia prowazekii str. Chernikova   2 2
No Yes Rickettsia prowazekii Rp22   2 2
No Yes Rickettsia prowazekii str. Madrid E   2 2
No Yes Rickettsia slovaca str. D-CWPP   2 2
No Yes Rickettsia massiliae str. AZT80   2 2
No Yes Rickettsia rickettsii str. Arizona   2 2
No Yes Rickettsia rickettsii str. Brazil   2 2
No Yes Rickettsia rickettsii str. Hauke   2 2
No Yes Rickettsia rickettsii str. Colombia   2 2
No Yes Rickettsia rickettsii str. Hlp#2   2 2
No Yes Rickettsia rickettsii str. Hino   2 2
No Yes Rickettsia rickettsii str. Iowa   2 2
No Yes Methylobacterium extorquens DM4   16 11
No Yes Methylobacterium extorquens PA1   10 8
No Yes Brucella ceti TE10759-12   9 6
No Yes Brucella ceti TE28753-12   8 6
No Yes Brucella canis HSK A52141   10 7
No Yes Brucella suis VBI22   10 7
No Yes Brucella suis 1330   10 7
No Yes Brucella suis 1330   10 7
No Yes Brucella melitensis NI   10 7
No Yes Brucella melitensis M5-90   10 7
No Yes Brucella melitensis M28   10 7
No Yes Brucella melitensis bv. 1 str. 16M   10 7
No Yes Brucella abortus A13334   10 7
No Yes Brucella melitensis biovar Abortus 2308   10 7
No Yes Brucella abortus bv. 1 str. 9-941   10 7
No Yes Sinorhizobium fredii USDA 257   24 17
No Yes Sinorhizobium fredii HH103   25 16
No Yes Sinorhizobium meliloti 2011   12 9
No Yes Sinorhizobium meliloti GR4   25 16
No Yes Sinorhizobium meliloti Rm41   17 13
No Yes Sinorhizobium meliloti SM11   16 11
No Yes Sinorhizobium meliloti BL225C   20 14
No Yes Sinorhizobium meliloti 1021   21 16
No Yes Rhizobium etli CFN 42   20 14
No Yes Rhizobium etli bv. mimosae str. Mim1   17 13
No Yes Rhizobium tropici CIAT 899   10 6
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   12 9
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   9 7
No Yes Liberibacter crescens BT-1   5 3
No Yes Candidatus Liberibacter solanacearum CLso-ZC1   2 2
No Yes Candidatus Liberibacter americanus str. Sao Paulo   2 2
No Yes Candidatus Liberibacter asiaticus str. gxpsy   1 1
No Yes Mesorhizobium australicum WSM2073   14 10
No Yes Hyphomicrobium nitrativorans NL23   10 9
No Yes Hyphomicrobium denitrificans 1NES1   17 9
No Yes Oligotropha carboxidovorans OM5   28 15
No Yes Oligotropha carboxidovorans OM5   28 15
No Yes Rhodopseudomonas palustris DX-1   7 5
No Yes Rhodopseudomonas palustris TIE-1   13 8
No Yes Rhodopseudomonas palustris HaA2   6 5
No Yes Rhodopseudomonas palustris BisB5   7 5
No Yes Rhodopseudomonas palustris BisB18   8 7
No Yes Rhodopseudomonas palustris CGA009   8 5
No Yes Bradyrhizobium sp. S23321   12 9
No Yes Bradyrhizobium sp. BTAi1   27 18
No Yes Bradyrhizobium oligotrophicum S58   16 12
No Yes Bradyrhizobium japonicum USDA 6   21 14
No Yes Bartonella australis Aust/NH1   1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   1 1
No Yes Bartonella quintana RM-11   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   6 4
No Yes Mannheimia succiniciproducens MBEL55E   5 2
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   3 1
No Yes Aggregatibacter actinomycetemcomitans ANH9381   2 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   3 1
No Yes Haemophilus somnus 2336   9 3
No Yes Mannheimia haemolytica USMARC_2286   4 2
No Yes Mannheimia haemolytica M42548   7 3
No Yes Mannheimia haemolytica D174   4 2
No Yes Mannheimia haemolytica D171   4 2
No Yes Mannheimia haemolytica D153   4 2
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   4 2
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   4 2
No Yes Pasteurella multocida 36950   6 2
No Yes Pasteurella multocida subsp. multocida str. HN06   3 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   6 2
No Yes Haemophilus influenzae KR494   3 1
No Yes Haemophilus influenzae F3047   3 1
No Yes Haemophilus influenzae F3031   3 1
No Yes Haemophilus influenzae 10810   3 1
No Yes Haemophilus influenzae PittGG   3 2
No Yes Haemophilus influenzae 86-028NP   3 1
No Yes Haemophilus influenzae R2866   3 1
No Yes Haemophilus influenzae R2846   3 1
No Yes Actinobacillus suis H91-0380   6 3
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   6 3
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   6 3
No Yes Aeromonas hydrophila ML09-119   5 3
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   7 5
No Yes Vibrio parahaemolyticus BB22OP   4 4
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   7 5
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   7 5
No Yes Vibrio vulnificus CMCP6   6 4
No Yes Vibrio vulnificus YJ016   6 4
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Idiomarina loihiensis GSL 199   9 6
No Yes Shewanella sp. W3-18-1   4 4
No Yes Shewanella sp. ANA-3   8 6
No Yes Shewanella baltica BA175   5 5
No Yes Shewanella baltica OS678   5 5
No Yes Shewanella baltica OS117   5 5
No Yes Shewanella baltica OS223   5 5
No Yes Shewanella baltica OS195   5 5
No Yes Shewanella baltica OS155   4 4
No Yes Shewanella sp. MR-7   4 4
No Yes Shewanella putrefaciens 200   4 4
No Yes Glaciecola psychrophila 170   8 8
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   12 10
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   12 10
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   10 8
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   10 8
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   10 8
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   11 9
No Yes Alteromonas macleodii str. 'English Channel 615'   8 6
No Yes Alteromonas macleodii AltDE1   12 10
No Yes Alteromonas macleodii str. 'English Channel 673'   6 6
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   9 7
No Yes Alteromonas macleodii str. 'Black Sea 11'   9 7
No Yes Alteromonas macleodii ATCC 27126   5 5
No Yes Alcanivorax dieselolei B5   10 7
No Yes Thalassolituus oleivorans MIL-1   11 5
No Yes Candidatus Portiera aleyrodidarum TV   1 1
No Yes Candidatus Portiera aleyrodidarum BT-QVLC   1 1
No Yes Candidatus Portiera aleyrodidarum BT-Q-AWRs   1 1
No Yes Candidatus Portiera aleyrodidarum BT-B-HRs whitefly B from Isarael   1 1
No Yes Candidatus Portiera aleyrodidarum BT-B-HRs   1 1
No Yes Candidatus Carsonella ruddii PC isolate NHV   1 1
No Yes Candidatus Carsonella ruddii HT isolate Thao2000   1 1
No Yes Candidatus Carsonella ruddii CS isolate Thao2000   1 1
No Yes Candidatus Carsonella ruddii CE isolate Thao2000   1 1
No Yes Candidatus Carsonella ruddii DC   1 1
No Yes Candidatus Carsonella ruddii HC isolate Thao2000   1 1
No Yes Stenotrophomonas maltophilia D457   10 6
No Yes Stenotrophomonas maltophilia JV3   7 5
No Yes Stenotrophomonas maltophilia R551-3   7 5
No Yes Xylella fastidiosa subsp. fastidiosa GB514   8 4
No Yes Xylella fastidiosa M12   8 4
No Yes Xylella fastidiosa Temecula1   8 4
No Yes Xylella fastidiosa 9a5c   8 4
No Yes Xanthomonas citri subsp. citri Aw12879   7 5
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   7 5
No Yes Xanthomonas axonopodis pv. citrumelo F1   7 5
No Yes Xanthomonas axonopodis Xac29-1   7 5
No Yes Xanthomonas oryzae pv. oryzicola BLS256   7 5
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   7 5
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   7 5
No Yes Xanthomonas campestris pv. raphani 756C   7 5
No Yes Xanthomonas campestris pv. campestris str. 8004   7 5
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   7 5
No Yes Spiribacter salinus M19-40   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   5 4
No Yes Coxiella burnetii CbuK_Q154   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Legionella pneumophila str. Paris   8 4
No Yes Legionella pneumophila str. Lens   4 2
No Yes Legionella pneumophila subsp. pneumophila LPE509   10 4
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   7 3
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   7 3
No Yes Legionella pneumophila subsp. pneumophila   10 4
No Yes Legionella pneumophila subsp. pneumophila   4 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   4 2
No Yes Legionella pneumophila 2300/99 Alcoy   7 3
No Yes Proteus mirabilis BB2000   8 4
No Yes Morganella morganii subsp. morganii KT   8 4
No Yes Edwardsiella tarda C07-087   3 1
No Yes Edwardsiella tarda FL6-60   3 1
No Yes Rahnella aquatilis HX2   8 4
No Yes Yersinia pseudotuberculosis PB1/+   8 4
No Yes Yersinia pseudotuberculosis YPIII   8 4
No Yes Yersinia pseudotuberculosis IP 32953   8 4
No Yes Yersinia pestis biovar Microtus str. 91001   8 4
No Yes Yersinia pestis A1122   8 4
No Yes Yersinia pestis Z176003   8 4
No Yes Yersinia pestis D182038   8 5
No Yes Yersinia pestis D106004   8 4
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   8 4
No Yes Yersinia pestis Nepal516   8 4
No Yes Yersinia pestis Antiqua   8 4
No Yes Yersinia pestis Angola   8 4
No Yes Yersinia pestis CO92   8 4
No Yes Yersinia pestis KIM10+   8 4
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   8 4
No Yes Yersinia enterocolitica subsp. palearctica Y11   8 4
No Yes Serratia sp. AS13   8 4
No Yes Serratia plymuthica S13   8 4
No Yes Serratia plymuthica 4Rx13   8 4
No Yes Serratia marcescens FGI94   7 3
No Yes Serratia marcescens WW4   8 4
No Yes Serratia liquefaciens ATCC 27592   8 4
No Yes Dickeya dadantii Ech586   8 4
No Yes Dickeya dadantii 3937   11 5
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   4 2
No Yes Pantoea ananatis LMG 5342   7 3
No Yes Pantoea ananatis PA13   7 3
No Yes Pantoea ananatis AJ13355   7 3
No Yes Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)   1 1
No Yes Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)   1 1
No Yes Buchnera aphidicola (Cinara tujafilina)   1 1
No Yes Buchnera aphidicola str. Bp (Baizongia pistaciae)   1 1
No Yes Buchnera aphidicola str. Ua (Uroleucon ambrosiae)   1 1
No Yes Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. 5A (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. APS (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. Sg (Schizaphis graminum)   1 1
No Yes Erwinia pyrifoliae DSM 12163   8 4
No Yes Erwinia amylovora CFBP1430   8 4
No Yes Cronobacter sakazakii CMCC 45402   11 5
No Yes Cronobacter sakazakii SP291   11 6
No Yes Cronobacter sakazakii ATCC BAA-894   11 5
No Yes Candidatus Blochmannia chromaiodes str. 640   1 1
No Yes Candidatus Blochmannia vafer str. BVAF   1 1
No Yes Candidatus Blochmannia pennsylvanicus str. BPEN   1 1
No Yes Raoultella ornithinolytica B6   8 4
No Yes Shigella sonnei 53G   8 4
No Yes Shigella flexneri 2002017   8 4
No Yes Shigella flexneri 2a str. 2457T   7 3
No Yes Shigella flexneri 2a str. 301   7 3
No Yes Shigella dysenteriae 1617   6 2
No Yes Shigella boydii Sb227   8 4
No Yes Salmonella bongori N268-08   7 3
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   7 3
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   7 3
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   7 3
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   7 3
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   10 4
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   7 3
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   7 3
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   7 3
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   7 3
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   7 3
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   7 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   7 3
No Yes Salmonella enterica serovar Bovismorbificans genomics   7 3
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   7 3
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   7 3
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   7 3
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   7 3
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   7 3
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   7 3
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   7 3
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   10 4
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   7 3
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   7 3
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   7 3
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   7 3
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   7 3
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   7 3
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   7 3
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   7 3
No Yes Klebsiella oxytoca KCTC 1686   8 4
No Yes Klebsiella pneumoniae JM45   11 5
No Yes Klebsiella pneumoniae CG43   8 4
No Yes Klebsiella pneumoniae KCTC 2242   8 4
No Yes Klebsiella pneumoniae 342   8 4
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   8 4
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   8 4
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   11 5
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   8 4
No Yes Enterobacter aerogenes EA1509E   8 4
No Yes Escherichia coli E24377A   8 4
No Yes Escherichia coli E. coli PMV-1   8 4
No Yes Escherichia coli JJ1886   8 4
No Yes Escherichia coli LY180   8 4
No Yes Escherichia coli APEC O78   8 4
No Yes Escherichia coli O7:K1 str. CE10   9 5
No Yes Escherichia coli O104:H4 str. 2009EL-2050   11 5
No Yes Escherichia coli O104:H4 str. 2009EL-2071   11 5
No Yes Escherichia coli O104:H4 str. 2011C-3493   11 5
No Yes Escherichia coli NA114   8 4
No Yes Escherichia coli P12b   11 5
No Yes Escherichia coli str. 'clone D i2'   8 4
No Yes Escherichia coli str. 'clone D i14'   8 4
No Yes Escherichia coli UM146   8 4
No Yes Escherichia coli 042   9 5
No Yes Escherichia coli Xuzhou21   8 4
No Yes Escherichia coli IHE3034   8 4
No Yes Escherichia coli UMNK88   8 4
No Yes Escherichia coli O83:H1 str. NRG 857C   8 4
No Yes Escherichia coli ABU 83972   8 4
No Yes Escherichia coli KO11FL   8 4
No Yes Escherichia coli KO11FL   8 4
No Yes Escherichia coli LF82   8 4
No Yes Escherichia coli ED1a   8 4
No Yes Escherichia coli IAI39   9 5
No Yes Escherichia coli UMN026   9 5
No Yes Escherichia coli 55989   11 5
No Yes Escherichia coli S88   8 4
No Yes Escherichia coli IAI1   8 4
No Yes Escherichia coli W   8 4
No Yes Escherichia coli W   8 4
No Yes Escherichia coli DH1   5 3
No Yes Escherichia coli DH1   5 3
No Yes Escherichia coli ATCC 8739   11 5
No Yes Escherichia coli BL21(DE3)   8 4
No Yes Escherichia coli BL21(DE3)   8 4
No Yes Escherichia coli SMS-3-5   8 4
No Yes Escherichia coli SE15   8 4
No Yes Escherichia coli SE11   8 4
No Yes Escherichia coli APEC O1   11 5
No Yes Escherichia coli O103:H2 str. 12009   8 4
No Yes Escherichia coli UTI89   8 4
No Yes Escherichia coli 536   8 4
No Yes Escherichia coli HS   8 4
No Yes Escherichia coli ETEC H10407   12 6
No Yes Escherichia coli O55:H7 str. RM12579   8 4
No Yes Escherichia coli O55:H7 str. CB9615   8 4
No Yes Escherichia coli O26:H11 str. 11368   8 4
No Yes Escherichia coli CFT073   8 4
No Yes Escherichia coli O111:H- str. 11128   8 4
No Yes Escherichia coli O127:H6 str. E2348/69   8 4
No Yes Escherichia coli O157:H7 str. TW14359   8 4
No Yes Escherichia coli O157:H7 str. EC4115   8 4
No Yes Escherichia coli O157:H7 str. Sakai   8 4
No Yes Escherichia coli O157:H7 str. EDL933   8 4
No Yes Escherichia coli str. K-12 substr. MDS42   8 4
No Yes Escherichia coli BW2952   8 4
No Yes Escherichia coli str. K-12 substr. MG1655   8 4
No Yes Escherichia coli str. K-12 substr. W3110   8 4
No Yes Escherichia coli str. K-12 substr. DH10B   8 4
No Yes Escherichia coli B str. REL606   8 4
No Yes Enterobacter cloacae SCF1   7 3
No Yes Enterobacter cloacae EcWSU1   7 3
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   7 3
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   11 5
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   14 6
No Yes Azotobacter vinelandii CA6   8 4
No Yes Azotobacter vinelandii CA   8 4
No Yes Pseudomonas denitrificans ATCC 13867   14 9
No Yes Pseudomonas syringae pv. phaseolicola 1448A   6 4
No Yes Pseudomonas syringae pv. syringae B728a   12 6
No Yes Pseudomonas stutzeri CCUG 29243   17 9
No Yes Pseudomonas stutzeri DSM 10701   14 9
No Yes Pseudomonas stutzeri DSM 4166   16 9
No Yes Pseudomonas stutzeri RCH2   17 9
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   15 9
No Yes Pseudomonas monteilii SB3101   18 9
No Yes Pseudomonas monteilii SB3078   18 9
No Yes Pseudomonas putida H8234   25 15
No Yes Pseudomonas putida HB3267   18 9
No Yes Pseudomonas putida NBRC 14164   19 11
No Yes Pseudomonas putida DOT-T1E   15 10
No Yes Pseudomonas putida S16   18 9
No Yes Pseudomonas putida BIRD-1   12 7
No Yes Pseudomonas putida W619   19 10
No Yes Pseudomonas putida ND6   14 8
No Yes Pseudomonas putida KT2440   17 9
No Yes Pseudomonas putida GB-1   19 11
No Yes Pseudomonas protegens CHA0   12 7
No Yes Pseudomonas poae RE*1-1-14   8 6
No Yes Pseudomonas fluorescens F113   13 9
No Yes Pseudomonas fluorescens A506   11 7
No Yes Pseudomonas fluorescens R124   8 6
No Yes Pseudomonas fluorescens Pf0-1   14 8
No Yes Pseudomonas resinovorans NBRC 106553   34 15
No Yes Pseudomonas mendocina NK-01   19 13
No Yes Pseudomonas aeruginosa SCV20265   14 8
No Yes Pseudomonas aeruginosa MTB-1   11 7
No Yes Pseudomonas aeruginosa LES431   11 7
No Yes Pseudomonas aeruginosa RP73   11 7
No Yes Pseudomonas aeruginosa B136-33   11 7
No Yes Pseudomonas aeruginosa PA1R   8 6
No Yes Pseudomonas aeruginosa PA1   11 7
No Yes Pseudomonas aeruginosa DK2   14 8
No Yes Pseudomonas aeruginosa NCGM2.S1   11 7
No Yes Pseudomonas aeruginosa M18   11 7
No Yes Pseudomonas aeruginosa LESB58   11 7
No Yes Pseudomonas aeruginosa PA7   11 7
No Yes Pseudomonas aeruginosa PAO1   11 7
No Yes Acinetobacter genomosp. 13TU RUH2624   8 4
No Yes Acinetobacter sp. SH024   7 4
No Yes Acinetobacter calcoaceticus ruh2202   7 3
No Yes Acinetobacter baumannii ZW85-1   4 2
No Yes Acinetobacter baumannii TYTH-1   4 2
No Yes Acinetobacter baumannii BJAB0868   4 2
No Yes Acinetobacter baumannii BJAB0715   4 2
No Yes Acinetobacter baumannii BJAB07104   4 2
No Yes Acinetobacter baumannii TCDC-AB0715   4 2
No Yes Acinetobacter baumannii D1279779   4 2
No Yes Acinetobacter baumannii MDR-TJ   4 2
No Yes Acinetobacter baumannii 1656-2   4 2
No Yes Acinetobacter baumannii ATCC 19606   4 2
No Yes Acinetobacter baumannii AB307-0294   4 2
No Yes Acinetobacter baumannii AYE   7 3
No Yes Acinetobacter baumannii SDF   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   4 2
No Yes Acinetobacter baumannii AB0057   7 3
No Yes Acinetobacter baumannii ACICU   4 2
No Yes Acinetobacter radioresistens SH164   7 3
No Yes Acinetobacter junii SH205   7 3
No Yes Acinetobacter johnsonii SH046   7 3
No Yes Acinetobacter lwoffii SH145   8 4
No Yes Methylophaga sp. JAM7   9 6
No Yes Cycloclasticus zancles 7-ME   11 7
No Yes Francisella noatunensis subsp. orientalis LADL--07-285A   2 2
No Yes Francisella tularensis subsp. mediasiatica FSC147   1 1
No Yes Francisella tularensis subsp. holarctica F92   1 1
No Yes Francisella tularensis subsp. holarctica FTNF002-00   1 1
No Yes Francisella tularensis subsp. holarctica OSU18   1 1
No Yes Francisella tularensis subsp. holarctica LVS   1 1
No Yes Francisella tularensis subsp. holarctica FSC200   1 1
No Yes Francisella tularensis subsp. tularensis TIGB03   2 2
No Yes Francisella tularensis subsp. tularensis TI0902   1 1
No Yes Francisella tularensis subsp. tularensis NE061598   1 1
No Yes Francisella tularensis subsp. tularensis FSC198   1 1
No Yes Francisella tularensis subsp. tularensis SCHU S4   1 1
No Yes Francisella cf. novicida Fx1   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   38 28
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   28 19
No Yes Caldisphaera lagunensis DSM 15908   1 1
No Yes Aeropyrum camini SY1 = JCM 12091   6 6
No Yes Sulfolobus islandicus LAL14/1   6 6
No Yes Sulfolobus islandicus REY15A   6 6
No Yes Sulfolobus islandicus HVE10/4   5 5
No Yes Sulfolobus islandicus Y.G.57.14   7 6
No Yes Sulfolobus islandicus L.S.2.15   5 5
No Yes Sulfolobus islandicus M.16.27   5 5
No Yes Sulfolobus islandicus M.14.25   5 5
No Yes Sulfolobus islandicus M.16.4   5 5
No Yes Sulfolobus islandicus L.D.8.5   5 5
No Yes Sulfolobus solfataricus 98/2   5 5
No Yes Sulfolobus acidocaldarius SUSAZ   6 6
No Yes Sulfolobus acidocaldarius Ron12/I   5 5
No Yes Sulfolobus acidocaldarius N8   5 5
No Yes Methanomethylovorans hollandica DSM 15978   6 4
No Yes Methanolobus psychrophilus R15   7 7
No Yes Methanosarcina mazei Tuc01   5 5
No Yes Methanoregula formicica Methanoregula formicicum SMSP   3 3
No Yes Archaeoglobus sulfaticallidus PM70-1   3 3
No Yes Ferroplasma acidarmanus fer1   2 2
No Yes Halovivax ruber XH-70   19 13
No Yes Natrinema pellirubrum DSM 15624   18 14
No Yes Natronococcus occultus SP4   12 9
No Yes Natronobacterium gregoryi SP2   4 4
No Yes Haloquadratum walsbyi C23   5 5
No Yes Halorhabdus tiamatea SARL4B   7 7
No Yes Natronomonas moolapensis 8.8.11   8 7
No Yes Haloarcula hispanica N601   20 16
No Yes Methanococcus maripaludis X1   1 1
No Yes Methanococcus maripaludis C7   1 1
No Yes Methanococcus maripaludis S2   1 1
No Yes Methanobacterium sp. SWAN-1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 123 47
No Yes Homo sapiens (NCBI version) Human 59 25
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 45 20
No Yes Heliconius numata (Incomplete)   11 9
No Yes Loa loa v3.3 (Request) Eye worm 4 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Moniliophthora perniciosa FA553 (Genome survey)   49 35
No Yes Pinus sylvestris (Incomplete) Scots pine 5 5
No Yes Picea sitchensis (Incomplete) Sitka spruce 14 11
No Yes Lotus japonicus (Early assembly)   199 134
No Yes Malus x domestica (Duplicate) Apple 398 248
No Yes Ricinus communis (Early assembly) Castor bean 183 93
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   407 221
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 214 117
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 216 118
No Yes Phoenix dactylifera (Early draft) Date palm 76 46
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   4 2
No Yes Wolbachia endosymbiont of Brugia malayi v1.0 (Broad Institute)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   7 5
No Yes Homo sapiens 69_37 Human 45 20
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 37 17
No Yes Gorilla gorilla 69_3.1 Western gorilla 44 19
No Yes Pongo abelii 69_2 Sumatran orangutan 39 16
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 41 17
No Yes Macaca mulatta 69_1 Rhesus monkey 36 20
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 49 19
No Yes Otolemur garnettii 69_3 Small-eared galago 43 19
No Yes Microcebus murinus 69_1 Gray mouse lemur 38 13
No Yes Rattus norvegicus 69_3.4 Norway rat 45 20
No Yes Mus musculus 69_38 House mouse 45 20
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 41 17
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 40 19
No Yes Cavia porcellus 69_3 Domestic guinea pig 42 17
No Yes Oryctolagus cuniculus 69_2 Rabbit 40 17
No Yes Ochotona princeps 69 American pika 31 16
No Yes Tupaia belangeri 69 Northern tree shrew 35 14
No Yes Sus scrofa 69_10.2 Pig 48 21
No Yes Bos taurus 69_3.1 Cattle 44 19
No Yes Vicugna pacos 69_1 Alpaca 35 9
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 42 17
No Yes Mustela putorius furo 69_1.0 Domestic ferret 44 22
No Yes Ailuropoda melanoleuca 69_1 Giant panda 48 22
No Yes Canis familiaris 69_3.1 Dog 46 19
No Yes Felis catus 69 Domestic cat 40 13
No Yes Equus caballus 69_2 Horse 37 17
No Yes Myotis lucifugus 69_2.0 Little brown bat 46 18
No Yes Pteropus vampyrus 69_1 Large flying fox 42 18
No Yes Sorex araneus 69_1 European shrew 33 14
No Yes Erinaceus europaeus 69 Western European hedgehog 32 10
No Yes Procavia capensis 69_1 Cape rock hyrax 36 18
No Yes Loxodonta africana 69_3 African savanna elephant 44 19
No Yes Echinops telfairi 69 Small Madagascar hedgehog 31 14
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 33 11
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 22 10
No Yes Macropus eugenii 69_1.0 Tammar wallaby 40 14
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 47 17
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 49 21
No Yes Ornithorhynchus anatinus 69_5 Platypus 46 21
No Yes Petromyzon marinus 69_7.0 Sea lamprey 9 5
No Yes Meleagris gallopavo 69_2 Turkey 37 12
No Yes Gallus gallus 69_2 Chicken 43 13
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 43 16
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 38 13
No Yes Anolis carolinensis 69_2.0 Green anole 37 12
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 32 13
No Yes Latimeria chalumnae 69_1 Coelacanth 39 14
No Yes Gadus morhua 69_1 Atlantic cod 38 18
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 39 19
No Yes Takifugu rubripes 69_4 Torafugu 39 19
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 39 19
No Yes Oryzias latipes 69_1 Japanese medaka 38 18
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 37 18
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 39 19
No Yes Danio rerio 69_9 Zebrafish 50 26
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 29 16
No Yes Ciona intestinalis 69 Vase tunicate 35 22
No Yes Drosophila melanogaster 69_5 Fruit fly 20 8
No Yes Caenorhabditis elegans 69_215 Roundworm 8 6
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 10 4
No Yes Arabidopsis thaliana 10 Thale cress 175 90
No Yes 1_050719N (meta-genome)   38 35
No Yes 1_Upper_euphotic (meta-genome)   4 3
No Yes 2_050719S (meta-genome)   62 59
No Yes 2_Base_of_chrolophyll_max (meta-genome)   4 4
No Yes 3_050719R (meta-genome)   37 36
No Yes 3_Below_base_of_euphotic (meta-genome)   5 5
No Yes 4_050719Q (meta-genome)   56 53
No Yes 4_Deep_abyss (meta-genome)   17 14
No Yes 5_050719P (meta-genome)   50 44
No Yes 5_Below_upper_mesopelagic (meta-genome)   12 12
No Yes 6_Upper_euphotic (meta-genome)   11 10
No Yes 7_Oxygen_minimum_layer (meta-genome)   13 12
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   22 22
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   17 17
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   51 42
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   55 43
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   64 47
No Yes Bath Hot Springs, filamentous community (meta-genome)   3 3
No Yes Bath Hot Springs, planktonic community (meta-genome)   12 12
No Yes Combined (meta-genome)   186 155
No Yes Crater Hills (meta-genome)   3 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   175 147
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   51 45
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   46 38
No Yes Dump bottom (Dump bottom) (meta-genome)   380 357
No Yes Dump top (Dump top) (meta-genome)   333 305
No Yes Endophytic microbiome from Rice (meta-genome)   38 32
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   36 27
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   53 44
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   51 43
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   103 93
No Yes Fungus garden combined (combined) (meta-genome)   82 61
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   170 143
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   190 162
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   14 14
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   5 4
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   5 5
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   36 35
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   17 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   17 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   29 29
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   17 17
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   19 19
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   27 27
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   27 26
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   4 4
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   150 147
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   127 124
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   28 24
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   479 398
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   114 97
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   58 46
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   111 93
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   114 100
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   89 71
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   206 205
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   87 85
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   36 28
No Yes NCBI 2017_08 genome   544368 313335
No Yes Nymph Lake Bulk Water (meta-genome)   5 4
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   216 194
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   6 4
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   6 4
No Yes Protozoadb 2010_08 (Protozoadb)   33 21
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   132 121
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   101 91
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   123 102
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   26 22
No Yes Sludge/US, Jazz Assembly (meta-genome)   14 13
No Yes Sludge/US, Phrap Assembly (meta-genome)   48 37
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   318 270
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   276 270
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   537 510
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   231 222
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   256 239
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   324 318
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   406 395
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   9 7
No Yes STRING v9.0.5 (STRING)   9590 5509
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   69 68
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   271 255
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   100 98
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   259556 182572
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   42 28
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   16 12
No Yes Global Ocean Sampling Expedition (GOS)   6968 6622
No Yes NCBI plasmid sequences (Plasmids)   956 515
No Yes NCBI viral sequences (Viral)   55 53
No Yes PDB chains (SCOP 1.75) (PDB)   222 151
No Yes Protein Data Bank (all PDB sequenc)   2673 1647
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6215 6213
No Yes TargetDB (Targets)   110 72
No Yes The Salmonella enterica Pan-genome (meta-genome)   219 93
No Yes UniProt viral sequences (Viral)   8 7

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