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C2 domain (Calcium/lipid-binding domain, CaLB) superfamily domain assignments
in
Brachypodium distachyon

Assignment details

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Brachypodium distachyon has 177 significant domains in 119 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G13460.1   5.36e-24   628-770   Synaptotagmin-like (S variant)  
  2.53e-21   10-156   Synaptotagmin-like (S variant)  
  5.8e-19   462-618   Synaptotagmin-like (S variant)  
  0.0000000000115   301-444   Synaptotagmin-like (S variant)  
EG:BRADI1G16560.1   1.93e-25   472-599   PLC-like (P variant)  
EG:BRADI1G18260.1   0.0000000000000123   3-143   Synaptotagmin-like (S variant)  
EG:BRADI1G18270.1   3.87e-16   3-144   Synaptotagmin-like (S variant)  
EG:BRADI1G18280.1   0.00000000000000117   4-137   PLC-like (P variant)  
EG:BRADI1G18290.1   4.37e-16   3-147   Synaptotagmin-like (S variant)  
EG:BRADI1G22717.1   1.18e-20   201-336   PLC-like (P variant)  
EG:BRADI1G22717.2   1.24e-20   201-336   PLC-like (P variant)  
EG:BRADI1G22717.3   1.24e-20   201-336   PLC-like (P variant)  
EG:BRADI1G23257.1   0.0000000000000011   17-152   Synaptotagmin-like (S variant)  
EG:BRADI1G26840.1   1.36e-25   6-155   PLC-like (P variant)  
EG:BRADI1G26850.1   1.64e-28   4-99,135-163   PLC-like (P variant)  
EG:BRADI1G27740.1   5.69e-32   271-407   Synaptotagmin-like (S variant)  
  1.99e-25   594-742   PLC-like (P variant)  
  1.02e-24   5-134   Synaptotagmin-like (S variant)  
  5.05e-24   431-586   Synaptotagmin-like (S variant)  
EG:BRADI1G30310.1   9.67e-26   4-126   Synaptotagmin-like (S variant)  
EG:BRADI1G30310.2   0.000000000000717   5-83   PLC-like (P variant)  
EG:BRADI1G33150.1   2.99e-31   257-391   PLC-like (P variant)  
  9.68e-20   419-536   Synaptotagmin-like (S variant)  
EG:BRADI1G35960.1   1.28e-34   41-178   Synaptotagmin-like (S variant)  
  1.87e-32   201-354   Synaptotagmin-like (S variant)  
  2.23e-28   363-500   PLC-like (P variant)  
EG:BRADI1G35970.1   3e-30   62-203   Synaptotagmin-like (S variant)  
  1.35e-28   226-383   PLC-like (P variant)  
  6.69e-25   392-534   PLC-like (P variant)  
EG:BRADI1G36387.1   5.06e-32   2-140   PLC-like (P variant)  
  2.38e-17   585-704   Synaptotagmin-like (S variant)  
EG:BRADI1G36580.1   0.00000000000000415   5-156   PLC-like (P variant)  
EG:BRADI1G43230.1   1.03e-32   2-131   Synaptotagmin-like (S variant)  
  7.14e-23   549-671   Synaptotagmin-like (S variant)  
EG:BRADI1G45400.1   0.000000000000311   2022-2141   Synaptotagmin-like (S variant)  
EG:BRADI1G47310.1   5.89e-20   203-339   PLC-like (P variant)  
EG:BRADI1G49690.1   0.00000589   19-165   Synaptotagmin-like (S variant)  
EG:BRADI1G52680.1   6.12e-31   260-392   Synaptotagmin-like (S variant)  
EG:BRADI1G53085.1   3.87e-28   13-168   Synaptotagmin-like (S variant)  
EG:BRADI1G56630.1   1.2e-23   584-737   PLC-like (P variant)  
  1.25e-23   9-152   Synaptotagmin-like (S variant)  
  0.000000000000067   413-575   PLC-like (P variant)  
  0.00000000012   239-384   Synaptotagmin-like (S variant)  
EG:BRADI1G59226.1   4.02e-28   6-126   Synaptotagmin-like (S variant)  
EG:BRADI1G59232.1   2.83e-29   13-138   Synaptotagmin-like (S variant)  
EG:BRADI1G60680.1   0.0000000000000265   67-169   PLC-like (P variant)  
EG:BRADI1G65610.1   6.1e-26   471-597   PLC-like (P variant)  
EG:BRADI1G67950.1   5.14e-29   219-355   PLC-like (P variant)  
EG:BRADI1G71590.1   2.49e-16   35-169   Synaptotagmin-like (S variant)  
EG:BRADI1G77265.1   4.52e-22   22-172   PLC-like (P variant)  
EG:BRADI2G02010.1   3.13e-28   608-722   PLC-like (P variant)  
  5.06e-27   480-592   PLC-like (P variant)  
  0.000000000655   282-402   Synaptotagmin-like (S variant)  
EG:BRADI2G04480.1   4.7e-19   6-153   Synaptotagmin-like (S variant)  
EG:BRADI2G08500.2   2.49e-29   277-404   Synaptotagmin-like (S variant)  
EG:BRADI2G13000.1   8.18e-18   3-140   Synaptotagmin-like (S variant)  
EG:BRADI2G16690.1   2.7e-22   216-355   PLC-like (P variant)  
  5.06e-21   533-667   PLC-like (P variant)  
  0.00000000000698   5-130   PLC-like (P variant)  
EG:BRADI2G24410.1   1.24e-31   71-209   PLC-like (P variant)  
  1.27e-30   396-533   PLC-like (P variant)  
  5.66e-24   234-387   Synaptotagmin-like (S variant)  
EG:BRADI2G27007.1   2.68e-28   215-312   Synaptotagmin-like (S variant)  
EG:BRADI2G27267.1   1.01e-16   62-186   Synaptotagmin-like (S variant)  
  0.00000000000000311   201-292   Synaptotagmin-like (S variant)  
EG:BRADI2G27410.1   6.39e-16   3-138   Synaptotagmin-like (S variant)  
EG:BRADI2G34290.1   2.34e-19   6-155   PLC-like (P variant)  
EG:BRADI2G35890.1   2.65e-17   4-142   PLC-like (P variant)  
EG:BRADI2G38170.1   5.27e-21   474-601   PLC-like (P variant)  
EG:BRADI2G38520.1   1.31e-25   214-352   PLC-like (P variant)  
EG:BRADI2G40030.1   6.14e-25   82-190   Synaptotagmin-like (S variant)  
EG:BRADI2G42110.1   5.55e-27   672-824   PLC-like (P variant)  
  1.57e-22   14-155   PLC-like (P variant)  
  5.41e-21   342-480   Synaptotagmin-like (S variant)  
  6.83e-19   496-663   PLC-like (P variant)  
EG:BRADI2G45590.1   0.0000000000117   18-159   PLC-like (P variant)  
EG:BRADI2G53370.1   0.0000000342   5-140   Synaptotagmin-like (S variant)  
EG:BRADI2G54660.1   8.04e-29   2-134   Synaptotagmin-like (S variant)  
EG:BRADI2G54660.2   6.55e-29   2-134   Synaptotagmin-like (S variant)  
EG:BRADI2G54660.3   4.17e-27   2-135   Synaptotagmin-like (S variant)  
EG:BRADI2G55240.1   0.000000000000112   42-188   Synaptotagmin-like (S variant)  
EG:BRADI2G55240.2   0.000000000000106   42-188   Synaptotagmin-like (S variant)  
EG:BRADI2G59920.1   1.56e-17   4-134   Synaptotagmin-like (S variant)  
EG:BRADI2G60950.2   1.64e-27   240-337   Synaptotagmin-like (S variant)  
EG:BRADI2G61060.1   0.00000052   31-163   Synaptotagmin-like (S variant)  
EG:BRADI2G61400.1   0.000000000000164   69-183   PLC-like (P variant)  
EG:BRADI3G01860.1   1.94e-16   11-36,102-209   Synaptotagmin-like (S variant)  
EG:BRADI3G07237.1   3.13e-29   150-302   PLC-like (P variant)  
EG:BRADI3G07237.2   6.85e-18   143-207   PLC-like (P variant)  
EG:BRADI3G07237.3   1.49e-29   82-234   PLC-like (P variant)  
EG:BRADI3G07360.1   4.32e-30   17-141   PLC-like (P variant)  
  6.4e-22   601-720   PLC-like (P variant)  
EG:BRADI3G10810.1   3.72e-26   7-94   PLC-like (P variant)  
EG:BRADI3G10810.3   0.00000000000000177   20-74,124-140   Synaptotagmin-like (S variant)  
EG:BRADI3G11080.1   1.37e-27   284-402   Synaptotagmin-like (S variant)  
EG:BRADI3G12250.3   1.44e-31   258-392   Synaptotagmin-like (S variant)  
  2.38e-20   419-536   Synaptotagmin-like (S variant)  
EG:BRADI3G12510.1   1.85e-16   4-139   PLC-like (P variant)  
EG:BRADI3G20060.1   6.55e-33   394-517   PLC-like (P variant)  
  1.24e-31   225-357   PLC-like (P variant)  
EG:BRADI3G20220.1   8.66e-20   44-186   PLC-like (P variant)  
EG:BRADI3G31637.1   5.61e-23   170-320   Synaptotagmin-like (S variant)  
EG:BRADI3G31655.1   3.74e-24   62-215   PLC-like (P variant)  
EG:BRADI3G39100.1   1.44e-35   2-135   PLC-like (P variant)  
  1.64e-22   583-705   Synaptotagmin-like (S variant)  
EG:BRADI3G43340.1   0.000000154   714-822   Synaptotagmin-like (S variant)  
EG:BRADI3G43340.2   0.000000154   714-822   Synaptotagmin-like (S variant)  
EG:BRADI3G43340.4   0.000000154   714-822   Synaptotagmin-like (S variant)  
EG:BRADI3G43780.1   0.0000000327   457-565   Synaptotagmin-like (S variant)  
EG:BRADI3G44400.1   0.00000000000000246   168-288   Synaptotagmin-like (S variant)  
  0.0000000000000067   52-161   Synaptotagmin-like (S variant)  
EG:BRADI3G44400.2   0.0000000000000018   168-288   Synaptotagmin-like (S variant)  
  0.00000000000000499   52-161   Synaptotagmin-like (S variant)  
EG:BRADI3G44400.3   0.0000000000000018   168-288   Synaptotagmin-like (S variant)  
  0.00000000000000452   52-161   Synaptotagmin-like (S variant)  
EG:BRADI3G44540.1   0.000000155   8-166   Synaptotagmin-like (S variant)  
EG:BRADI3G48257.1   0.00000000229   128-211   Synaptotagmin-like (S variant)  
EG:BRADI3G49890.1   2.38e-28   2-124   Synaptotagmin-like (S variant)  
EG:BRADI3G50990.1   2.08e-22   366-520   PLC-like (P variant)  
  1.56e-21   47-181   PLC-like (P variant)  
  2.53e-18   205-355   Synaptotagmin-like (S variant)  
EG:BRADI3G51050.1   3.74e-17   3-138   Synaptotagmin-like (S variant)  
EG:BRADI3G55180.1   0.00000000000405   15-159   PLC-like (P variant)  
EG:BRADI3G55250.1   1.02e-25   440-602   Synaptotagmin-like (S variant)  
  1.3e-25   612-751   PLC-like (P variant)  
  2.32e-23   6-138   PLC-like (P variant)  
  0.0000000000147   282-416   Synaptotagmin-like (S variant)  
EG:BRADI3G56560.1   3.84e-27   176-325   Synaptotagmin-like (S variant)  
EG:BRADI3G60430.1   5.92e-19   403-536   Synaptotagmin-like (S variant)  
EG:BRADI3G60430.2   5.61e-19   403-536   Synaptotagmin-like (S variant)  
EG:BRADI4G03720.1   7.85e-28   196-335   PLC-like (P variant)  
EG:BRADI4G08080.1   0.0000255   431-485   PLC-like (P variant)  
EG:BRADI4G08660.1   1.93e-27   13-115   Synaptotagmin-like (S variant)  
EG:BRADI4G17080.1   0.00000000164   10-134   PLC-like (P variant)  
EG:BRADI4G23680.1   2.49e-17   2006-2125   PLC-like (P variant)  
EG:BRADI4G27090.1   6.55e-34   40-178   Synaptotagmin-like (S variant)  
  6.26e-31   200-353   Synaptotagmin-like (S variant)  
  0.0000000000000185   354-415   PLC-like (P variant)  
EG:BRADI4G30500.1   0.000000000000982   21-165   PLC-like (P variant)  
EG:BRADI4G35301.1   8.78e-24   80-191   Synaptotagmin-like (S variant)  
EG:BRADI4G36490.1   9.52e-32   255-393   Synaptotagmin-like (S variant)  
  5.06e-22   419-537   Synaptotagmin-like (S variant)  
EG:BRADI4G36490.2   9.52e-32   255-393   Synaptotagmin-like (S variant)  
  5.06e-22   419-537   Synaptotagmin-like (S variant)  
EG:BRADI4G36800.1   1.44e-23   16-48,77-182   PLC-like (P variant)  
EG:BRADI4G38860.1   3.13e-18   4-135   Synaptotagmin-like (S variant)  
EG:BRADI4G40830.1   8.19e-24   505-645   PLC-like (P variant)  
  7.02e-21   180-318   Synaptotagmin-like (S variant)  
  1.99e-17   4-131   Synaptotagmin-like (S variant)  
  0.00000000061   335-493   Synaptotagmin-like (S variant)  
EG:BRADI4G45180.1   2.23e-25   458-584   PLC-like (P variant)  
EG:BRADI5G13230.1   6.24e-23   376-513   PLC-like (P variant)  
  8.42e-21   212-367   PLC-like (P variant)  
  0.0000000000000982   47-185   PLC-like (P variant)  
EG:BRADI5G13380.1   6.7e-22   544-667   Synaptotagmin-like (S variant)  
  0.00000000000551   2-140   Synaptotagmin-like (S variant)  
EG:BRADI5G15300.1   2.23e-24   136-255   Synaptotagmin-like (S variant)  
EG:BRADI5G16570.1   7.74e-29   2-127   Synaptotagmin-like (S variant)  
EG:BRADI5G16570.2   8.48e-29   2-127   Synaptotagmin-like (S variant)  
EG:BRADI5G16570.3   7.29e-17   20-105   Synaptotagmin-like (S variant)  
EG:BRADI5G16570.4   8.04e-22   1-103   Synaptotagmin-like (S variant)  
EG:BRADI5G17100.2   3.27e-22   202-337   PLC-like (P variant)  
EG:BRADI5G23880.1   4.7e-33   445-565   PLC-like (P variant)  
  8.26e-31   260-392   PLC-like (P variant)  
EG:BRADI5G26490.1   3.56e-29   2-130   Synaptotagmin-like (S variant)  
EG:BRADI5G26730.1   5.41e-33   273-410   Synaptotagmin-like (S variant)  
  5.69e-29   434-587   PLC-like (P variant)  
  1.5e-26   596-732   PLC-like (P variant)  
  4.91e-23   4-134   Synaptotagmin-like (S variant)  
EG:BRADI5G26730.2   4.27e-33   273-410   Synaptotagmin-like (S variant)  
  4.56e-29   434-587   PLC-like (P variant)  
  1.2e-26   596-732   PLC-like (P variant)  
  3.96e-23   4-134   Synaptotagmin-like (S variant)  
EG:BRADI5G27530.1   1.85e-33   284-424   Synaptotagmin-like (S variant)  
  7.29e-25   619-739   PLC-like (P variant)  
  8.63e-20   448-610   PLC-like (P variant)  
  2.23e-18   2-138   Synaptotagmin-like (S variant)  
 
Weak hits:
EG:BRADI4G13280.1   0.0719   408-463   Synaptotagmin-like (S variant)  
EG:BRADI4G35770.1   0.00937   21-155   Synaptotagmin-like (S variant)  

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Select to display   Genome       Domains   Proteins
No Yes ALL   444571 444571
No Yes Homo sapiens 76_38 Human 988 626
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 228 144
No Yes Gorilla gorilla 76_3.1 Western gorilla 373 214
No Yes Pongo abelii 76_2 Sumatran orangutan 252 161
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 257 157
No Yes Papio anubis 76 Olive baboon 260 168
No Yes Macaca mulatta 76_1 Rhesus monkey 450 275
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 560 356
No Yes Otolemur garnettii 76_3 Small-eared galago 248 153
No Yes Microcebus murinus 76_1 Gray mouse lemur 188 123
No Yes Rattus norvegicus 76_5.0 Norway rat 305 188
No Yes Mus musculus 76_38 House mouse 607 383
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 200 126
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 253 163
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 248 146
No Yes Cavia porcellus 76_3 Domestic guinea pig 246 152
No Yes Oryctolagus cuniculus 76_2 Rabbit 239 147
No Yes Ochotona princeps 76 American pika 194 126
No Yes Tupaia belangeri 76 Northern tree shrew 162 105
No Yes Sus scrofa 76_10.2 Pig 259 169
No Yes Bos taurus 76_3.1 Cattle 259 160
No Yes Ovis aries 76_3.1 Sheep 288 176
No Yes Vicugna pacos 76_1 Alpaca 118 77
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 235 144
No Yes Mustela putorius furo 76_1.0 Domestic ferret 255 150
No Yes Ailuropoda melanoleuca 76_1 Giant panda 280 172
No Yes Canis familiaris 76_3.1 Dog 377 208
No Yes Felis catus 76_6.2 Domestic cat 261 156
No Yes Equus caballus 76_2 Horse 320 184
No Yes Myotis lucifugus 76_2.0 Little brown bat 236 148
No Yes Pteropus vampyrus 76_1 Large flying fox 231 142
No Yes Sorex araneus 76_1 European shrew 133 82
No Yes Erinaceus europaeus 76 Western European hedgehog 153 110
No Yes Procavia capensis 76_1 Cape rock hyrax 205 134
No Yes Loxodonta africana 76_3 African savanna elephant 333 204
No Yes Echinops telfairi 76 Small Madagascar hedgehog 168 112
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 285 191
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 114 77
No Yes Macropus eugenii 76_1.0 Tammar wallaby 193 124
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 256 169
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 235 147
No Yes Ornithorhynchus anatinus 76_5 Platypus 231 170
No Yes Saccoglossus kowalevskii v3.0   221 155
No Yes Petromyzon marinus 76_7.0 Sea lamprey 118 87
No Yes Meleagris gallopavo 76_2 Turkey 235 153
No Yes Gallus gallus 76_4 Chicken 230 143
No Yes Anas platyrhynchos 76_1.0 Mallard 223 142
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 216 147
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 220 140
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 284 185
No Yes Anolis carolinensis 76_2.0 Green anole 248 158
No Yes Xenopus laevis African clawed frog 172 136
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 325 196
No Yes Latimeria chalumnae 76_1 Coelacanth 305 191
No Yes Lepisosteus oculatus 76 Spotted gar 385 226
No Yes Gadus morhua 76_1 Atlantic cod 301 184
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 485 279
No Yes Takifugu rubripes 76_4 Torafugu 1288 726
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 397 238
No Yes Oryzias latipes 76_1 Japanese medaka 371 235
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 336 208
No Yes Poecilia formosa 76 Amazon molly 357 211
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 481 299
No Yes Astyanax mexicanus 76 Mexican tetra 320 208
No Yes Danio rerio 76_9 Zebrafish 545 348
No Yes Oikopleura dioica   66 47
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 359 169
No Yes Ciona intestinalis 76 Vase tunicate 136 79
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 162 108
No Yes Adineta vaga   304 211
No Yes Octopus bimaculoides 280   175 119
No Yes Crassostrea gigas 22 Pacific oyster 134 90
No Yes Lottia gigantea Owl limpet 131 88
No Yes Helobdella robusta   133 98
No Yes Capitella sp. I   129 90
No Yes Danaus plexippus OGS1.0 Monarch butterfly 79 56
No Yes Heliconius melpomene Postman butterfly 62 47
No Yes Bombyx mori Domestic silkworm 70 55
No Yes Nasonia vitripennis Jewel wasp 58 38
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 203 132
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 88 59
No Yes Linepithema humile v1.1 Argentine ant 86 59
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 83 56
No Yes Solenopsis invicta v.2.2.3 Red fire ant 76 54
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 87 55
No Yes Atta cephalotes v1.1   92 64
No Yes Camponotus floridanus v3.3 Florida carpenter ant 87 57
No Yes Lucilia cuprina Australian sheep blowfly 64 41
No Yes Drosophila grimshawi 1.3   71 51
No Yes Drosophila willistoni 1.3   70 49
No Yes Drosophila pseudoobscura 2.13   68 47
No Yes Drosophila persimilis 1.3   62 44
No Yes Drosophila suzukii   79 50
No Yes Drosophila yakuba 1.3   70 50
No Yes Drosophila simulans 1.3   67 49
No Yes Drosophila sechellia 1.3   68 48
No Yes Drosophila melanogaster 76_5 Fruit fly 285 197
No Yes Drosophila erecta 1.3   69 48
No Yes Drosophila ananassae 1.3   68 47
No Yes Drosophila virilis 1.2   72 52
No Yes Drosophila mojavensis 1.3   70 49
No Yes Megaselia scalaris 22   31 23
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 66 47
No Yes Culex pipiens quinquefasciatus Southern house mosquito 75 53
No Yes Anopheles darlingi 22 American malaria mosquito 43 35
No Yes Anopheles gambiae 49_3j African malaria mosquito 74 54
No Yes Tribolium castaneum 3.0 Red flour beetle 87 54
No Yes Pediculus humanus corporis (Early assembly) Human body louse 89 57
No Yes Acyrthosiphon pisum Pea aphid 66 43
No Yes Rhodnius prolixus 22   71 49
No Yes Daphnia pulex Common water flea 98 76
No Yes Strigamia maritima 22   110 69
No Yes Sarcoptes scabiei   51 40
No Yes Tetranychus urticae Two-spotted spider mite 69 51
No Yes Ixodes scapularis (Preliminary) Black-legged tick 76 54
No Yes Pristionchus pacificus   68 54
No Yes Meloidogyne incognita Southern root-knot nematode 49 39
No Yes Meloidogyne hapla   48 35
No Yes Onchocerca volvulus 22   70 52
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 68 50
No Yes Caenorhabditis japonica   67 49
No Yes Caenorhabditis brenneri   95 72
No Yes Caenorhabditis remanei   85 61
No Yes Caenorhabditis elegans 76_235 Roundworm 160 113
No Yes Caenorhabditis briggsae 2   75 52
No Yes Trichinella spiralis 22   51 43
No Yes Hymenolepis microstoma   81 50
No Yes Echinococcus multilocularis   68 42
No Yes Echinococcus granulosus   76 44
No Yes Taenia solium Pork tapeworm 66 42
No Yes Schistosoma mansoni   83 55
No Yes Mnemiopsis leidyi Sea walnut 120 80
No Yes Thelohanellus kitauei   15 11
No Yes Acropora digitifera v1.0   125 91
No Yes Nematostella vectensis 1.0 Starlet sea anemone 186 123
No Yes Hydra vulgaris   148 93
No Yes Amphimedon queenslandica   103 68
No Yes Trichoplax adhaerens   98 58
No Yes Proterospongia sp. ATCC 50818   82 60
No Yes Monosiga brevicollis   56 43
No Yes Sphaeroforma arctica JP610   56 48
No Yes Capsaspora owczarzaki ATCC 30864   83 62
No Yes Conidiobolus coronatus NRRL28638 v1.0   46 38
No Yes Mortierella verticillata NRRL 6337   58 39
No Yes Phycomyces blakesleeanus   46 31
No Yes Rhizopus oryzae RA 99-880   52 33
No Yes Mucor circinelloides   48 31
No Yes Rhizomucor miehei CAU432   41 26
No Yes Malassezia globosa CBS 7966   28 20
No Yes Sporisorium reilianum 22   19 12
No Yes Ustilago maydis   17 10
No Yes Mixia osmundae IAM 14324 v1.0   22 14
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   20 13
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   17 11
No Yes Melampsora laricis-populina   20 14
No Yes Rhodotorula graminis WP1 v1.0   16 11
No Yes Sporobolomyces roseus IAM 13481   13 9
No Yes Microbotryum violaceum 22   23 17
No Yes Wallemia sebi v1.0   18 11
No Yes Sphaerobolus stellatus v1.0   39 32
No Yes Piloderma croceum F 1598 v1.0   56 51
No Yes Serpula lacrymans var. lacrymans S7.9   23 18
No Yes Coniophora puteana   18 14
No Yes Hydnomerulius pinastri v2.0   20 15
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   21 16
No Yes Pisolithus microcarpus 441 v1.0   18 14
No Yes Pisolithus tinctorius Marx 270 v1.0   22 18
No Yes Scleroderma citrinum Foug A v1.0   20 16
No Yes Coprinopsis cinerea okayama7 130 v3   26 18
No Yes Pleurotus ostreatus Oyster mushroom 23 19
No Yes Amanita thiersii Skay4041 v1.0   25 20
No Yes Amanita muscaria Koide v1.0 Fly agaric 27 19
No Yes Galerina marginata v1.0   33 27
No Yes Hebeloma cylindrosporum h7 v2.0   25 20
No Yes Laccaria bicolor S238N-H82   22 16
No Yes Agaricus bisporus var. bisporus   20 16
No Yes Schizophyllum commune   24 18
No Yes Stereum hirsutum FP-91666 SS1 v1.0   26 19
No Yes Heterobasidion annosum   24 19
No Yes Gloeophyllum trabeumv1.0   23 16
No Yes Punctularia strigosozonata v1.0   26 20
No Yes Sebacina vermifera MAFF 305830 v1.0   38 32
No Yes Fomitiporia mediterranea v1.0   39 33
No Yes Tulasnella calospora AL13/4D v1.0   18 13
No Yes Postia placenta   33 22
No Yes Wolfiporia cocos MD-104 SS10 v1.0   20 14
No Yes Fomitopsis pinicolav1.0   19 14
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   20 14
No Yes Phanerochaete chrysosporium RP-78 2.1   24 17
No Yes Dichomitus squalens   19 14
No Yes Trametes versicolor v1.0   22 15
No Yes Tremella mesenterica Witches' butter 20 13
No Yes Daldinia eschscholzii EC12 v1.0   23 16
No Yes Apiospora montagnei NRRL 25634 v1.0   30 21
No Yes Magnaporthe poae ATCC 64411 22   20 14
No Yes Magnaporthe grisea 70-15   25 17
No Yes Podospora anserina   24 16
No Yes Sporotrichum thermophile ATCC 42464   19 12
No Yes Thielavia terrestris NRRL 8126   17 11
No Yes Chaetomium globosum CBS 148.51   20 13
No Yes Neurospora tetrasperma   22 15
No Yes Neurospora discreta FGSC 8579   20 13
No Yes Neurospora crassa OR74A   23 16
No Yes Cryphonectria parasitica Chestnut blight fungus 21 14
No Yes Verticillium albo-atrum VaMs.102   13 8
No Yes Verticillium dahliae VdLs.17   21 15
No Yes Acremonium alcalophilumv 1.0   19 13
No Yes Glomerella graminicola 22   23 16
No Yes Fusarium graminearum   27 19
No Yes Nectria haematococca mpVI   27 20
No Yes Fusarium oxysporum f. sp. lycopersici 4286   31 24
No Yes Fusarium verticillioides 7600   26 19
No Yes Trichoderma asperellum CBS 433.97 v1.0   22 15
No Yes Trichoderma atroviride   22 15
No Yes Trichoderma citrinoviride v1.0   20 14
No Yes Trichoderma reesei 1.2   21 14
No Yes Trichoderma virens Gv29-8   23 16
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   23 16
No Yes Trichoderma harzianum CBS 226.95 v1.0   22 15
No Yes Amorphotheca resinae v1.0 Creosote fungus 19 13
No Yes Botrytis cinerea B05.10   20 13
No Yes Sclerotinia sclerotiorum   17 11
No Yes Blumeria graminis 22   17 12
No Yes Didymella exigua CBS 183.55 v1.0   23 15
No Yes Leptosphaeria maculans 22   23 15
No Yes Setosphaeria turcica v1.0   22 14
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   23 15
No Yes Cochliobolus victoriae FI3 v1.0   24 16
No Yes Cochliobolus carbonum 26-R-13 v1.0   23 15
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 22 14
No Yes Alternaria brassicicola   21 13
No Yes Cochliobolus lunatus m118 v2.0   23 16
No Yes Pyrenophora teres f. teres 22   24 16
No Yes Pyrenophora tritici-repentis   23 15
No Yes Stagonospora nodorum   22 15
No Yes Mycosphaerella graminicola IPO323   21 15
No Yes Zasmidium cellare ATCC 36951 v1.0   23 16
No Yes Dothistroma septosporum   21 15
No Yes Septoria musiva v1.0   21 15
No Yes Mycosphaerella fijiensis CIRAD86   19 13
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   20 14
No Yes Paracoccidioides brasiliensis Pb18   18 13
No Yes Coccidioides posadasii RMSCC 3488   20 14
No Yes Coccidioides immitis RS   23 17
No Yes Ajellomyces dermatitidis SLH14081   19 13
No Yes Histoplasma capsulatum class NAmI strain WU24   19 13
No Yes Microsporum canis CBS 113480   17 12
No Yes Trichophyton equinum CBS 127.97   19 13
No Yes Trichophyton verrucosum HKI 0517   16 11
No Yes Arthroderma benhamiae CBS 112371   15 11
No Yes Trichophyton tonsurans CBS 112818   16 10
No Yes Trichophyton rubrum CBS 118892   17 12
No Yes Uncinocarpus reesii 1704   17 12
No Yes Aspergillus zonatus v1.0   18 13
No Yes Penicillium chrysogenum Wisconsin 54-1255   19 13
No Yes Penicillium chrysogenum v1.0   19 13
No Yes Aspergillus acidus v1.0   19 13
No Yes Aspergillus fumigatus Af293   19 13
No Yes Aspergillus brasiliensis v1.0   19 13
No Yes Aspergillus nidulans FGSC A4   17 12
No Yes Aspergillus sydowii v1.0   19 13
No Yes Aspergillus versicolor v1.0   19 13
No Yes Aspergillus glaucus   19 13
No Yes Aspergillus carbonarius ITEM 5010   19 13
No Yes Neosartorya fischeri NRRL 181   19 13
No Yes Aspergillus terreus NIH2624   19 14
No Yes Aspergillus tubingensis v1.0   19 13
No Yes Aspergillus wentii v1.0   18 12
No Yes Aspergillus oryzae RIB40   18 12
No Yes Aspergillus niger 22   17 12
No Yes Aspergillus niger ATCC 1015   14 8
No Yes Aspergillus flavus NRRL3357   19 13
No Yes Aspergillus clavatus NRRL 1   19 13
No Yes Penicillium marneffei ATCC 18224   19 13
No Yes Tuber melanosporum Mel28 22   18 12
No Yes Tuber melanosporum Vittad Perigord truffle 18 12
No Yes Hansenula polymorpha v2.0   19 11
No Yes Dekkera bruxellensis CBS 2499 v2.0   15 9
No Yes Pichia membranifaciensv1.0   15 9
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   19 11
No Yes Candida dubliniensis CD36   19 11
No Yes Candida tropicalis MYA-3404   18 11
No Yes Candida parapsilosis   19 11
No Yes Candida albicans SC5314   18 11
No Yes Lodderomyces elongisporus NRRL YB-4239   16 10
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   19 11
No Yes Pichia stipitis CBS 6054   19 11
No Yes Candida guilliermondii ATCC 6260   18 11
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   19 11
No Yes Debaromyces hansenii   18 11
No Yes Wickerhamomyces anomalus   19 12
No Yes Pichia pastoris GS115   18 10
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   10 5
No Yes Yarrowia lipolytica CLIB122   13 9
No Yes Candida lusitaniae ATCC 42720   19 11
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   19 11
No Yes Vanderwaltozyma polyspora DSM 70294   15 11
No Yes Candida glabrata CBS138   16 11
No Yes Kluyveromyces thermotolerans CBS 6340   19 11
No Yes Lachancea kluyveri   19 11
No Yes Kluyveromyces waltii   19 11
No Yes Ashbya gossypii ATCC 10895   19 11
No Yes Zygosaccharomyces rouxii   17 11
No Yes Saccharomyces mikatae MIT   21 13
No Yes Saccharomyces paradoxus MIT   23 12
No Yes Saccharomyces cerevisiae 76 Baker's yeast 23 12
No Yes Saccharomyces bayanus MIT   22 13
No Yes Kluyveromyces lactis   18 10
No Yes Schizosaccharomyces cryophilus OY26 22   22 16
No Yes Schizosaccharomyces octosporus yFS286   22 16
No Yes Schizosaccharomyces japonicus yFS275   21 15
No Yes Schizosaccharomyces pombe Fission yeast 22 16
No Yes Catenaria anguillulae PL171 v1.0   44 37
No Yes Allomyces macrogynus ATCC 38327   87 80
No Yes Spizellomyces punctatus DAOM BR117   42 30
No Yes Dictyostelium discoideum   65 58
No Yes Dictyostelium purpureum   64 54
No Yes Entamoeba dispar 1.2   43 39
No Yes Entamoeba invadens 1.2   62 59
No Yes Entamoeba histolytica 1   45 42
No Yes Selaginella moellendorffii   145 111
No Yes Pinus taeda Loblolly pine 139 111
No Yes Picea abies Norway spruce 90 75
No Yes Eucalyptus grandis v201 Rose gum 225 169
No Yes Theobroma cacao B97-61/B2 v1 Cacao 133 87
No Yes Gossypium raimondii v221   444 305
No Yes Citrus clementina v165   186 133
No Yes Citrus sinensis v154 Sweet orange 237 167
No Yes Thellungiella halophila v173   177 119
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 246 175
No Yes Capsella rubella v183   185 120
No Yes Arabidopsis lyrata Lyrate rockcress 165 111
No Yes Arabidopsis thaliana 10 Thale cress 203 142
No Yes Carica papaya Papaya 104 68
No Yes Medicago truncatula Barrel medic 227 165
No Yes Phaseolus vulgaris v186 French bean 201 140
No Yes Glycine max v109 Soybean 320 221
No Yes Cucumis sativus v122 Cucumber 168 115
No Yes Fragaria vesca Wild strawberry 156 101
No Yes Malus domestica v196 Apple 260 175
No Yes Prunus persica v139 Peach 157 103
No Yes Linum usitatissimum v200 Flax 220 162
No Yes Manihot esculenta v147 Cassava 191 131
No Yes Populus trichocarpa v156 Black cottonwood 242 152
No Yes Vitis vinifera Wine grape 138 91
No Yes Mimulus guttatus v140 Spotted monkey flower 188 137
No Yes Solanum lycopersicum v.2.3 Tomato 168 117
No Yes Solanum tuberosum Potato 218 142
No Yes Actinidia chinensis Hongyang   220 155
No Yes Aquilegia coerulea v195   183 127
No Yes Triticum urartu 22   128 85
No Yes Triticum aestivum 22 Bread wheat 338 261
No Yes Aegilops tauschii 22   122 87
No Yes Brachypodium distachyon Stiff brome 177 119
No Yes Oryza barthii 22 African wild rice 179 124
No Yes Oryza meridionalis 22   179 115
No Yes Oryza glumaepatula 22   228 146
No Yes Oryza glaberrima African rice 118 83
No Yes Oryza punctata 22   214 151
No Yes Oryza nivara 22   214 145
No Yes Oryza brachyantha 22 Malo sina 138 92
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 198 133
No Yes Oryza sativa v193 Rice 198 133
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 159 108
No Yes Panicum virgatum v202 Switchgrass 258 182
No Yes Setaria italica v164 Foxtail millet 170 120
No Yes Zea mays subsp. mays Maize 251 184
No Yes Zea mays v181 Maize 261 184
No Yes Sorghum bicolor Sorghum 130 89
No Yes Musa balbisiana Balbis banana 192 130
No Yes Musa acuminata 22 Wild Malaysian banana 177 123
No Yes Amborella trichopoda 22   92 66
No Yes Physcomitrella patens   112 87
No Yes Coccomyxa subellipsoidea sp. C-169 v2   20 14
No Yes Asterochloris sp. Cgr/DA1pho v1.0   20 16
No Yes Chlorella variabilis sp. NC64A   23 18
No Yes Chlorella vulgaris   19 14
No Yes Volvox carteri f. nagariensis   29 25
No Yes Volvox carteri v199   29 25
No Yes Chlamydomonas reinhardtii 4.0   33 30
No Yes Ostreococcus sp. RCC809   19 12
No Yes Ostreococcus lucimarinus CCE9901   22 12
No Yes Ostreococcus tauri   18 10
No Yes Bathycoccus prasinos   18 9
No Yes Micromonas sp. RCC299   28 19
No Yes Micromonas pusilla CCMP1545 v3.0   23 18
No Yes Cyanidioschyzon merolae strain 10D 22   4 2
No Yes Cyanidioschyzon merolae   4 2
No Yes Porphyridium purpureum 02_2012   39 28
No Yes Thecamonas trahens ATCC 50062   147 88
No Yes Bigelowiella natans CCMP2755 22   100 80
No Yes Giardia lamblia 2.3   2 2
No Yes Cyanophora paradoxa   118 97
No Yes Leishmania mexicana 2.4   29 22
No Yes Leishmania major strain Friedlin   28 20
No Yes Leishmania infantum JPCM5 2.4   30 22
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   24 19
No Yes Trypanosoma vivax   20 15
No Yes Trypanosoma cruzi strain CL Brener   28 20
No Yes Trypanosoma congolense 2.4   28 20
No Yes Trypanosoma brucei gambiense v4.1   27 18
No Yes Trypanosoma brucei TREU927 v4.1   26 18
No Yes Ectocarpus siliculosus   94 53
No Yes Aureococcus anophagefferens   65 37
No Yes Albugo laibachii 22   54 44
No Yes Pythium iwayamai DAOM BR242034 22   94 63
No Yes Pythium arrhenomanes ATCC 12531 22   95 65
No Yes Pythium ultimum v1.7-2   93 64
No Yes Pythium aphanidermatum DAOM BR444 22   101 63
No Yes Pythium irregulare DAOM BR486 22   100 68
No Yes Pythium vexans DAOM BR484 22   90 61
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 84 56
No Yes Phytophthora sojae 1.1   91 65
No Yes Phytophthora infestans T30-4   105 73
No Yes Phytophthora capsici   63 47
No Yes Hyaloperonospora arabidopsidis 22   67 42
No Yes Phaeodactylum tricornutumCCAP 1055/1   30 20
No Yes Fragilariopsis cylindrus   34 26
No Yes Thalassiosira pseudonana CCMP1335   16 15
No Yes Perkinsus marinus ATCC 50983   28 25
No Yes Paramecium tetraurelia   158 111
No Yes Tetrahymena thermophila SB210 1   92 55
No Yes Ichthyophthirius multifiliis strain G5   55 31
No Yes Cryptosporidium hominis   14 7
No Yes Cryptosporidium muris   16 6
No Yes Cryptosporidium parvum Iowa II   16 6
No Yes Neospora caninum   23 14
No Yes Toxoplasma gondii VEG   22 14
No Yes Toxoplasma gondii ME49   23 15
No Yes Toxoplasma gondii GT1   23 15
No Yes Babesia bovis T2Bo   20 10
No Yes Theileria parva   10 7
No Yes Theileria annulata   10 5
No Yes Plasmodium falciparum 3D7   15 7
No Yes Plasmodium vivax SaI-1 7.0   17 9
No Yes Plasmodium knowlesi strain H   17 9
No Yes Plasmodium yoelii ssp. yoelii 1   14 7
No Yes Plasmodium chabaudi   16 8
No Yes Plasmodium berghei ANKA   16 8
No Yes Symbiodinium minutum clade B1 v1.2   136 112
No Yes Naegleria gruberi   98 88
No Yes Trichomonas vaginalis   134 97
No Yes Guillardia theta CCMP2712 v1.0   192 158
No Yes Emiliania huxleyi CCMP1516   77 63
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 408 261
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 205 144
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 99 65
No Yes Ascaris suum Victoria/Ghent Pig roundworm 84 64
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 141 100
No Yes Cryptococcus neoformans var. grubii H99   20 13
No Yes Cryptococcus neoformans B-3501A   20 13
No Yes Cryptococcus neoformans JEC21   19 12
No Yes Paracoccidioides brasiliensis Pb01   17 12
No Yes Paracoccidioides brasiliensis Pb03   18 13
No Yes Coccidioides posadasii str. Silveira   19 13
No Yes Coccidioides immitis RMSCC 3703   16 13
No Yes Coccidioides immitis RMSCC 2394   19 13
No Yes Coccidioides immitis H538.4   18 13
No Yes Ajellomyces dermatitidis ER-3   18 12
No Yes Histoplasma capsulatum H143   15 9
No Yes Histoplasma capsulatum H88   19 13
No Yes Histoplasma capsulatum G186AR   21 14
No Yes Aspergillus fumigatus A1163   19 13
No Yes Candida albicans WO-1   14 9
No Yes Saccharomyces cerevisiae UC5   21 10
No Yes Saccharomyces cerevisiae PW5   23 12
No Yes Saccharomyces cerevisiae CLIB324   3 3
No Yes Saccharomyces cerevisiae CBS7960   9 5
No Yes Saccharomyces cerevisiae YJM269   14 9
No Yes Saccharomyces cerevisiae T7   21 12
No Yes Saccharomyces cerevisiae FostersB   12 8
No Yes Saccharomyces cerevisiae FostersO   14 8
No Yes Saccharomyces cerevisiae VL3   16 9
No Yes Saccharomyces cerevisiae Vin13   18 11
No Yes Saccharomyces cerevisiae LalvinQA23   14 11
No Yes Saccharomyces cerevisiae AWRI796   17 10
No Yes Saccharomyces cerevisiae Sigma1278b   23 12
No Yes Saccharomyces cerevisiae W303   20 12
No Yes Saccharomyces cerevisiae JAY291   23 12
No Yes Saccharomyces cerevisiae AWRI1631   10 7
No Yes Saccharomyces cerevisiae YPS163   2 2
No Yes Saccharomyces cerevisiae M22   2 2
No Yes Saccharomyces cerevisiae T73   7 4
No Yes Saccharomyces cerevisiae CLIB215   10 6
No Yes Saccharomyces cerevisiae Y10   2 2
No Yes Saccharomyces cerevisiae YJM789   23 12
No Yes Saccharomyces cerevisiae YJM789   23 12
No Yes Saccharomyces cerevisiae RM11-1a   20 12
No Yes Saccharomyces cerevisiae RM11-1a   18 10
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 23 12
No Yes Schizosaccharomyces pombe 972h-   22 16
No Yes Batrachochytrium dendrobatidis JEL423   27 18
No Yes Batrachochytrium dendrobatidis JAM81   23 16
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 132 89
No Yes Hordeum vulgare 22 Domesticated barley 306 208
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 146 101
No Yes Trypanosoma brucei Lister 427 v4.1   27 18
No Yes Neospora caninum Nc-Liverpool 6.2   23 14
No Yes Plasmodium falciparum HB3   13 5
No Yes Plasmodium falciparum Dd2   8 4
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1104 696
No Yes Homo sapiens (NCBI version) Human 537 284
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 245 147
No Yes Heliconius numata (Incomplete)   8 8
No Yes Loa loa v3.3 (Request) Eye worm 69 50
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 65 57
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 51 37
No Yes Moniliophthora perniciosa FA553 (Genome survey)   10 9
No Yes Encephalitozoon intestinalis (endoparasite)   2 1
No Yes Encephalitozoon cuniculi (endoparasite)   2 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 13 13
No Yes Lotus japonicus (Early assembly)   125 92
No Yes Malus x domestica (Duplicate) Apple 260 175
No Yes Ricinus communis (Early assembly) Castor bean 125 85
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   280 202
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 163 113
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 168 117
No Yes Phoenix dactylifera (Early draft) Date palm 78 63
No Yes Homo sapiens 69_37 Human 274 164
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 224 141
No Yes Gorilla gorilla 69_3.1 Western gorilla 256 153
No Yes Pongo abelii 69_2 Sumatran orangutan 237 150
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 242 148
No Yes Macaca mulatta 69_1 Rhesus monkey 240 150
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 252 152
No Yes Otolemur garnettii 69_3 Small-eared galago 242 149
No Yes Microcebus murinus 69_1 Gray mouse lemur 188 123
No Yes Rattus norvegicus 69_3.4 Norway rat 253 152
No Yes Mus musculus 69_38 House mouse 255 150
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 198 125
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 227 147
No Yes Cavia porcellus 69_3 Domestic guinea pig 243 149
No Yes Oryctolagus cuniculus 69_2 Rabbit 222 136
No Yes Ochotona princeps 69 American pika 194 126
No Yes Tupaia belangeri 69 Northern tree shrew 162 105
No Yes Sus scrofa 69_10.2 Pig 224 147
No Yes Bos taurus 69_3.1 Cattle 243 148
No Yes Vicugna pacos 69_1 Alpaca 116 76
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 232 142
No Yes Mustela putorius furo 69_1.0 Domestic ferret 254 149
No Yes Ailuropoda melanoleuca 69_1 Giant panda 247 149
No Yes Canis familiaris 69_3.1 Dog 259 155
No Yes Felis catus 69 Domestic cat 176 111
No Yes Equus caballus 69_2 Horse 241 146
No Yes Myotis lucifugus 69_2.0 Little brown bat 229 143
No Yes Pteropus vampyrus 69_1 Large flying fox 228 140
No Yes Sorex araneus 69_1 European shrew 133 82
No Yes Erinaceus europaeus 69 Western European hedgehog 153 110
No Yes Procavia capensis 69_1 Cape rock hyrax 203 133
No Yes Loxodonta africana 69_3 African savanna elephant 231 144
No Yes Echinops telfairi 69 Small Madagascar hedgehog 168 112
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 154 106
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 112 76
No Yes Macropus eugenii 69_1.0 Tammar wallaby 191 122
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 209 134
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 227 140
No Yes Ornithorhynchus anatinus 69_5 Platypus 206 151
No Yes Petromyzon marinus 69_7.0 Sea lamprey 101 73
No Yes Meleagris gallopavo 69_2 Turkey 206 135
No Yes Gallus gallus 69_2 Chicken 206 131
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 214 145
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 227 150
No Yes Anolis carolinensis 69_2.0 Green anole 234 149
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 262 161
No Yes Latimeria chalumnae 69_1 Coelacanth 258 162
No Yes Gadus morhua 69_1 Atlantic cod 300 183
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 334 205
No Yes Takifugu rubripes 69_4 Torafugu 336 205
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 323 195
No Yes Oryzias latipes 69_1 Japanese medaka 299 189
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 333 206
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 356 215
No Yes Danio rerio 69_9 Zebrafish 347 216
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 93 55
No Yes Ciona intestinalis 69 Vase tunicate 102 67
No Yes Drosophila melanogaster 69_5 Fruit fly 73 50
No Yes Caenorhabditis elegans 69_215 Roundworm 75 52
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 23 12
No Yes Arabidopsis thaliana 10 Thale cress 168 111
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   5 5
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   3 3
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes NCBI 2017_08 genome   203761 124868
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   933 661
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   3 3
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   11460 7440
No Yes Uniprot 2018_03 genome   127967 86310
No Yes Global Ocean Sampling Expedition (GOS)   360 312
No Yes PDB chains (SCOP 1.75) (PDB)   37 35
No Yes Protein Data Bank (all PDB sequenc)   520 493
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   991 991
No Yes TargetDB (Targets)   336 272
No Yes UniProt viral sequences (Viral)   1 1

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