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Periplasmic chaperone C-domain superfamily domain assignments
in
Pseudomonas protegens CHA0

Assignment details

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Pseudomonas protegens CHA0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|501678965|ref|YP_007998791.1|   3.53e-16   142-240   Periplasmic chaperone C-domain  
gi|501678967|ref|YP_007998793.1|   0.0000000000000876   147-246   Periplasmic chaperone C-domain  
gi|501681426|ref|YP_008001252.1|   2.62e-16   133-230   Periplasmic chaperone C-domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   294042 294042
No Yes Thelohanellus kitauei   3 3
No Yes Amphimedon queenslandica   1 1
No Yes Phytophthora capsici   1 1
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia xenovorans LB400   2 2
No Yes Ralstonia eutropha JMP134   2 2
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   5 5
No Yes Ralstonia eutropha H16   1 1
No Yes Ralstonia pickettii 12D   2 2
No Yes Burkholderia sp. RPE64   3 3
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   2 2
No Yes Burkholderia pseudomallei 1106a   4 4
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   4 4
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   4 4
No Yes Burkholderia glumae BGR1   2 2
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   2 2
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Collimonas fungivorans Ter331   2 2
No Yes Advenella kashmirensis WT001   1 1
No Yes Bordetella petrii DSM 12804   3 3
No Yes Bordetella avium 197N   2 2
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   3 3
No Yes Achromobacter xylosoxidans   2 2
No Yes Gallibacterium anatis UMN179   3 3
No Yes Haemophilus ducreyi 35000HP   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio furnissii NCTC 11218   4 4
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella putrefaciens CN-32   2 2
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Frateuria aurantia DSM 6220   2 2
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Stenotrophomonas maltophilia K279a   2 2
No Yes Xylella fastidiosa M23   1 1
No Yes Photorhabdus asymbiotica   7 7
No Yes Photorhabdus luminescens subsp. laumondii TTO1   15 15
No Yes Xenorhabdus bovienii SS-2004   4 4
No Yes Xenorhabdus nematophila ATCC 19061   2 2
No Yes Providencia stuartii MRSN 2154   32 32
No Yes Proteus mirabilis HI4320   16 16
No Yes Edwardsiella ictaluri 93-146   2 2
No Yes Edwardsiella tarda EIB202   5 5
No Yes Rahnella sp. Y9602   5 5
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   7 7
No Yes Yersinia pseudotuberculosis IP 31758   11 11
No Yes Yersinia pestis Pestoides F   12 12
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   10 10
No Yes Serratia sp. AS12   5 5
No Yes Serratia symbiotica str. 'Cinara cedri'   1 1
No Yes Serratia plymuthica AS9   5 5
No Yes Serratia proteamaculans 568   8 8
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   4 4
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 2
No Yes Pantoea vagans C9-1   5 5
No Yes Pantoea ananatis LMG 20103   6 6
No Yes Erwinia tasmaniensis Et1/99   14 14
No Yes Erwinia sp. Ejp617   2 2
No Yes Erwinia billingiae Eb661   4 4
No Yes Erwinia pyrifoliae Ep1/96   2 2
No Yes Erwinia amylovora ATCC 49946   2 2
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   6 6
No Yes Cronobacter sakazakii ES15   9 9
No Yes Enterobacteriaceae bacterium strain FGI 57   14 14
No Yes Shigella sonnei Ss046   7 7
No Yes Shigella flexneri 5 str. 8401   8 8
No Yes Shigella dysenteriae Sd197   3 3
No Yes Shigella boydii CDC 3083-94   3 3
No Yes Salmonella bongori NCTC 12419   9 9
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   13 13
No Yes Klebsiella oxytoca E718   15 15
No Yes Klebsiella variicola At-22   10 10
No Yes Klebsiella pneumoniae NTUH-K2044   9 9
No Yes Enterobacter aerogenes KCTC 2190   10 10
No Yes Escherichia fergusonii ATCC 35469   7 7
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   9 9
No Yes Enterobacter sp. R4-368   3 3
No Yes Enterobacter sp. 638   4 4
No Yes Enterobacter asburiae LF7a   9 9
No Yes Enterobacter cloacae subsp. dissolvens SDM   8 8
No Yes Citrobacter rodentium ICC168   11 11
No Yes Citrobacter koseri ATCC BAA-895   17 17
No Yes Pseudomonas sp. TKP   5 5
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   3 3
No Yes Pseudomonas putida F1   3 3
No Yes Pseudomonas protegens Pf-5   3 3
No Yes Pseudomonas fluorescens SBW25   4 4
No Yes Pseudomonas aeruginosa UCBPP-PA14   7 7
No Yes Pseudomonas sp. VLB120   3 3
No Yes Psychrobacter sp. PRwf-1   1 1
No Yes Acinetobacter oleivorans DR1   2 2
No Yes Acinetobacter calcoaceticus PHEA-2   2 2
No Yes Acinetobacter baumannii ATCC 17978   1 1
No Yes Acinetobacter sp. ADP1   3 3
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 2 2
No Yes Ralstonia pickettii 12J   2 2
No Yes Burkholderia sp. YI23   2 2
No Yes Burkholderia sp. KJ006   2 2
No Yes Burkholderia pseudomallei MSHR305   3 3
No Yes Burkholderia pseudomallei NCTC 13179   3 3
No Yes Burkholderia pseudomallei BPC006   4 4
No Yes Burkholderia pseudomallei 1026b   4 4
No Yes Burkholderia pseudomallei MSHR346   2 2
No Yes Burkholderia pseudomallei 668   3 3
No Yes Burkholderia pseudomallei 1710b   4 4
No Yes Burkholderia pseudomallei K96243   4 4
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   7 7
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia cepacia GG4   5 5
No Yes Variovorax paradoxus EPS   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   3 3
No Yes Haemophilus parasuis ZJ0906   1 1
No Yes Haemophilus influenzae KR494   1 1
No Yes Haemophilus influenzae F3047   6 6
No Yes Haemophilus influenzae F3031   5 5
No Yes Haemophilus influenzae PittGG   1 1
No Yes Haemophilus influenzae R2866   1 1
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Shewanella sp. W3-18-1   2 2
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   2 2
No Yes Alcanivorax dieselolei B5   2 2
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   4 4
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Proteus mirabilis BB2000   16 16
No Yes Morganella morganii subsp. morganii KT   10 10
No Yes Edwardsiella tarda C07-087   6 6
No Yes Edwardsiella tarda FL6-60   5 5
No Yes Rahnella aquatilis HX2   4 4
No Yes Yersinia pseudotuberculosis PB1/+   11 11
No Yes Yersinia pseudotuberculosis YPIII   11 11
No Yes Yersinia pseudotuberculosis IP 32953   11 11
No Yes Yersinia pestis biovar Microtus str. 91001   12 12
No Yes Yersinia pestis A1122   10 10
No Yes Yersinia pestis Z176003   9 9
No Yes Yersinia pestis D182038   12 12
No Yes Yersinia pestis D106004   12 12
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   10 10
No Yes Yersinia pestis Nepal516   10 10
No Yes Yersinia pestis Antiqua   12 12
No Yes Yersinia pestis Angola   10 10
No Yes Yersinia pestis CO92   12 12
No Yes Yersinia pestis KIM10+   12 12
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   10 10
No Yes Yersinia enterocolitica subsp. palearctica Y11   10 10
No Yes Serratia sp. AS13   5 5
No Yes Serratia plymuthica S13   6 6
No Yes Serratia plymuthica 4Rx13   6 6
No Yes Serratia marcescens FGI94   6 6
No Yes Serratia marcescens WW4   11 11
No Yes Serratia liquefaciens ATCC 27592   4 4
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Pantoea ananatis LMG 5342   9 9
No Yes Pantoea ananatis PA13   7 7
No Yes Pantoea ananatis AJ13355   9 9
No Yes Erwinia pyrifoliae DSM 12163   2 2
No Yes Erwinia amylovora CFBP1430   2 2
No Yes Cronobacter sakazakii CMCC 45402   6 6
No Yes Cronobacter sakazakii SP291   8 8
No Yes Cronobacter sakazakii ATCC BAA-894   8 8
No Yes Raoultella ornithinolytica B6   6 6
No Yes Shigella sonnei 53G   11 11
No Yes Shigella flexneri 2002017   7 7
No Yes Shigella flexneri 2a str. 2457T   6 6
No Yes Shigella flexneri 2a str. 301   5 5
No Yes Shigella dysenteriae 1617   3 3
No Yes Shigella boydii Sb227   4 4
No Yes Salmonella bongori N268-08   10 10
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   5 5
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   13 13
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   13 13
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   13 13
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   15 15
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   14 14
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   12 12
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   15 15
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   15 15
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   14 14
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   14 14
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   13 13
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   13 13
No Yes Salmonella enterica serovar Bovismorbificans genomics   14 14
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   18 18
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   15 15
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   15 15
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   12 12
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   14 14
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   13 13
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   13 13
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   14 14
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   14 14
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   14 14
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   14 14
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   11 11
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   11 11
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   11 11
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   15 15
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   12 12
No Yes Klebsiella oxytoca KCTC 1686   14 14
No Yes Klebsiella pneumoniae JM45   8 8
No Yes Klebsiella pneumoniae CG43   12 12
No Yes Klebsiella pneumoniae KCTC 2242   11 11
No Yes Klebsiella pneumoniae 342   10 10
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   9 9
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   6 6
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   14 14
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   7 7
No Yes Enterobacter aerogenes EA1509E   9 9
No Yes Escherichia coli E24377A   12 12
No Yes Escherichia coli E. coli PMV-1   9 9
No Yes Escherichia coli JJ1886   8 8
No Yes Escherichia coli LY180   12 12
No Yes Escherichia coli APEC O78   12 12
No Yes Escherichia coli O7:K1 str. CE10   11 11
No Yes Escherichia coli O104:H4 str. 2009EL-2050   12 12
No Yes Escherichia coli O104:H4 str. 2009EL-2071   12 12
No Yes Escherichia coli O104:H4 str. 2011C-3493   12 12
No Yes Escherichia coli NA114   6 6
No Yes Escherichia coli P12b   7 7
No Yes Escherichia coli str. 'clone D i2'   9 9
No Yes Escherichia coli str. 'clone D i14'   9 9
No Yes Escherichia coli UM146   11 11
No Yes Escherichia coli 042   11 11
No Yes Escherichia coli Xuzhou21   14 14
No Yes Escherichia coli IHE3034   9 9
No Yes Escherichia coli UMNK88   11 11
No Yes Escherichia coli O83:H1 str. NRG 857C   9 9
No Yes Escherichia coli ABU 83972   10 10
No Yes Escherichia coli KO11FL   14 14
No Yes Escherichia coli KO11FL   14 14
No Yes Escherichia coli LF82   9 9
No Yes Escherichia coli ED1a   8 8
No Yes Escherichia coli IAI39   11 11
No Yes Escherichia coli UMN026   12 12
No Yes Escherichia coli 55989   12 12
No Yes Escherichia coli S88   8 8
No Yes Escherichia coli IAI1   13 13
No Yes Escherichia coli W   14 14
No Yes Escherichia coli W   14 14
No Yes Escherichia coli DH1   11 11
No Yes Escherichia coli DH1   11 11
No Yes Escherichia coli ATCC 8739   9 9
No Yes Escherichia coli BL21(DE3)   9 9
No Yes Escherichia coli BL21(DE3)   9 9
No Yes Escherichia coli SMS-3-5   9 9
No Yes Escherichia coli SE15   8 8
No Yes Escherichia coli SE11   17 17
No Yes Escherichia coli APEC O1   9 9
No Yes Escherichia coli O103:H2 str. 12009   12 12
No Yes Escherichia coli UTI89   11 11
No Yes Escherichia coli 536   11 11
No Yes Escherichia coli HS   10 10
No Yes Escherichia coli ETEC H10407   10 10
No Yes Escherichia coli O55:H7 str. RM12579   14 14
No Yes Escherichia coli O55:H7 str. CB9615   14 14
No Yes Escherichia coli O26:H11 str. 11368   13 13
No Yes Escherichia coli CFT073   11 11
No Yes Escherichia coli O111:H- str. 11128   12 12
No Yes Escherichia coli O127:H6 str. E2348/69   4 4
No Yes Escherichia coli O157:H7 str. TW14359   14 14
No Yes Escherichia coli O157:H7 str. EC4115   13 13
No Yes Escherichia coli O157:H7 str. Sakai   14 14
No Yes Escherichia coli O157:H7 str. EDL933   15 15
No Yes Escherichia coli str. K-12 substr. MDS42   8 8
No Yes Escherichia coli BW2952   11 11
No Yes Escherichia coli str. K-12 substr. MG1655   11 11
No Yes Escherichia coli str. K-12 substr. W3110   11 11
No Yes Escherichia coli str. K-12 substr. DH10B   10 10
No Yes Escherichia coli B str. REL606   9 9
No Yes Enterobacter cloacae SCF1   15 15
No Yes Enterobacter cloacae EcWSU1   7 7
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   12 12
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   11 11
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   12 12
No Yes Pseudomonas denitrificans ATCC 13867   3 3
No Yes Pseudomonas syringae pv. phaseolicola 1448A   3 3
No Yes Pseudomonas syringae pv. syringae B728a   3 3
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   3 3
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   2 2
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida ND6   3 3
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas putida GB-1   2 2
No Yes Pseudomonas protegens CHA0   3 3
No Yes Pseudomonas poae RE*1-1-14   4 4
No Yes Pseudomonas fluorescens A506   6 6
No Yes Pseudomonas fluorescens R124   2 2
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   2 2
No Yes Pseudomonas aeruginosa SCV20265   5 5
No Yes Pseudomonas aeruginosa MTB-1   5 5
No Yes Pseudomonas aeruginosa LES431   6 6
No Yes Pseudomonas aeruginosa RP73   6 6
No Yes Pseudomonas aeruginosa B136-33   5 5
No Yes Pseudomonas aeruginosa PA1R   4 4
No Yes Pseudomonas aeruginosa PA1   5 5
No Yes Pseudomonas aeruginosa DK2   6 6
No Yes Pseudomonas aeruginosa NCGM2.S1   4 4
No Yes Pseudomonas aeruginosa M18   6 6
No Yes Pseudomonas aeruginosa LESB58   6 6
No Yes Pseudomonas aeruginosa PA7   5 5
No Yes Pseudomonas aeruginosa PAO1   6 6
No Yes Acinetobacter genomosp. 13TU RUH2624   2 2
No Yes Acinetobacter sp. SH024   2 2
No Yes Acinetobacter calcoaceticus ruh2202   2 2
No Yes Acinetobacter baumannii ZW85-1   2 2
No Yes Acinetobacter baumannii TYTH-1   2 2
No Yes Acinetobacter baumannii BJAB0868   2 2
No Yes Acinetobacter baumannii BJAB0715   2 2
No Yes Acinetobacter baumannii BJAB07104   2 2
No Yes Acinetobacter baumannii TCDC-AB0715   3 3
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii MDR-TJ   2 2
No Yes Acinetobacter baumannii 1656-2   2 2
No Yes Acinetobacter baumannii ATCC 19606   2 2
No Yes Acinetobacter baumannii AB307-0294   2 2
No Yes Acinetobacter baumannii AYE   2 2
No Yes Acinetobacter baumannii MDR-ZJ06   2 2
No Yes Acinetobacter baumannii AB0057   2 2
No Yes Acinetobacter baumannii ACICU   2 2
No Yes Acinetobacter junii SH205   1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   9 9
No Yes 5_050719P (meta-genome)   11 11
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   73 73
No Yes Combined (meta-genome)   132 132
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   117 117
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   21 21
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   30 30
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   8 8
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   56 56
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   160 160
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   173 173
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   18 18
No Yes NCBI 2017_08 genome   273098 273093
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   5 5
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   3 3
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   3 3
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   4 4
No Yes STRING v9.0.5 (STRING)   1000 1000
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   5 5
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   7 7
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   14864 14864
No Yes Global Ocean Sampling Expedition (GOS)   21 21
No Yes NCBI plasmid sequences (Plasmids)   85 85
No Yes PDB chains (SCOP 1.75) (PDB)   11 11
No Yes Protein Data Bank (all PDB sequenc)   113 113
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   290 290
No Yes TargetDB (Targets)   15 15
No Yes The Salmonella enterica Pan-genome (meta-genome)   413 413

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