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TRAF domain-like superfamily domain assignments
in
Aquilegia coerulea v195

Assignment details

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Aquilegia coerulea v195 has 97 significant domains in 76 proteins.

     

Sequence ID   Evalue   Region   Family  
Aquca_002_01212.1|PACid:22051703   5.23e-27   10-143   MATH domain  
Aquca_003_00105.1|PACid:22049638   3.76e-35   21-160   MATH domain  
  0.00000000000000425   171-284   MATH domain  
Aquca_004_00584.1|PACid:22030151   9.97e-40   52-187   MATH domain  
Aquca_004_00584.2|PACid:22030152   9.65e-40   52-187   MATH domain  
Aquca_004_00584.3|PACid:22030153   9.65e-40   51-186   MATH domain  
Aquca_004_00584.4|PACid:22030154   9.65e-40   52-187   MATH domain  
Aquca_004_00584.5|PACid:22030155   9.65e-40   52-187   MATH domain  
Aquca_004_00584.6|PACid:22030156   9.16e-40   52-187   MATH domain  
Aquca_004_00584.7|PACid:22030157   7.85e-40   52-187   MATH domain  
Aquca_006_00303.1|PACid:22036803   2.45e-22   133-254   MATH domain  
  1.06e-19   5-113   MATH domain  
Aquca_006_00333.1|PACid:22036333   2.13e-35   163-299   MATH domain  
  3.27e-30   12-152   MATH domain  
Aquca_006_00335.1|PACid:22036605   3.11e-24   32-168   MATH domain  
Aquca_006_00336.1|PACid:22036948   5.07e-30   146-275   MATH domain  
  1.29e-22   10-145   MATH domain  
Aquca_006_00337.1|PACid:22036969   2.62e-27   151-284   MATH domain  
  4.25e-25   6-135   MATH domain  
Aquca_006_00338.1|PACid:22036795   1.34e-29   12-150   MATH domain  
  4.41e-28   163-294   MATH domain  
Aquca_006_00340.1|PACid:22036877   3.43e-29   146-278   MATH domain  
  2.13e-26   3-128   MATH domain  
Aquca_009_00146.1|PACid:22034614   3.92e-44   107-299   SIAH, seven in absentia homolog  
Aquca_009_00146.2|PACid:22034615   3.92e-44   107-299   SIAH, seven in absentia homolog  
Aquca_009_00146.3|PACid:22034613   3.92e-44   107-299   SIAH, seven in absentia homolog  
Aquca_009_00146.4|PACid:22034616   3.92e-44   107-299   SIAH, seven in absentia homolog  
Aquca_009_00146.5|PACid:22034617   3.92e-44   107-299   SIAH, seven in absentia homolog  
Aquca_009_00146.6|PACid:22034618   8.5e-21   107-201   SIAH, seven in absentia homolog  
Aquca_009_00556.1|PACid:22034140   2.62e-35   25-164   MATH domain  
Aquca_009_00556.2|PACid:22034141   2.45e-35   25-164   MATH domain  
Aquca_009_00556.3|PACid:22034142   1.8e-35   25-164   MATH domain  
Aquca_009_00614.1|PACid:22034208   1.8e-40   50-186   MATH domain  
Aquca_009_00614.2|PACid:22034209   1.8e-40   50-186   MATH domain  
Aquca_009_00614.3|PACid:22034210   1.8e-40   50-186   MATH domain  
Aquca_009_00614.4|PACid:22034211   1.8e-40   50-186   MATH domain  
Aquca_009_00614.5|PACid:22034212   1.8e-40   50-186   MATH domain  
Aquca_009_00614.6|PACid:22034213   1.8e-40   50-186   MATH domain  
Aquca_009_00614.7|PACid:22034214   1.8e-40   50-186   MATH domain  
Aquca_009_00614.8|PACid:22034215   1.19e-40   50-186   MATH domain  
Aquca_009_00795.1|PACid:22034052   0.0000183   84-140   SIAH, seven in absentia homolog  
Aquca_009_00795.2|PACid:22034050   0.0000183   84-140   SIAH, seven in absentia homolog  
Aquca_009_00795.3|PACid:22034051   0.0000183   84-140   SIAH, seven in absentia homolog  
Aquca_009_00795.4|PACid:22034053   0.0000183   84-140   SIAH, seven in absentia homolog  
Aquca_009_00883.1|PACid:22034959   2.78e-36   31-170   MATH domain  
Aquca_013_00081.1|PACid:22059318   2.55e-49   107-299   SIAH, seven in absentia homolog  
Aquca_013_00081.2|PACid:22059319   1.9e-41   107-270   SIAH, seven in absentia homolog  
Aquca_013_00174.1|PACid:22058767   0.000000085   442-553   MATH domain  
Aquca_014_00628.1|PACid:22027552   2.09e-45   112-304   SIAH, seven in absentia homolog  
Aquca_014_00628.2|PACid:22027553   3.53e-21   112-203   SIAH, seven in absentia homolog  
Aquca_014_00628.3|PACid:22027554   5.17e-21   112-203   SIAH, seven in absentia homolog  
Aquca_014_00677.1|PACid:22028741   0.00000000000000278   170-328   MATH domain  
  0.000000000000036   17-155   MATH domain  
Aquca_014_00677.2|PACid:22028742   0.00000000000000278   170-328   MATH domain  
  0.000000000000036   17-155   MATH domain  
Aquca_016_00170.1|PACid:22062473   8.39e-18   177-340   MATH domain  
  4.74e-16   22-167   MATH domain  
Aquca_016_00170.2|PACid:22062472   8.39e-18   177-340   MATH domain  
  4.74e-16   22-167   MATH domain  
Aquca_016_00180.1|PACid:22062512   4.41e-19   16-153   MATH domain  
  0.0000899   165-205   MATH domain  
  0.00196   240-309   MATH domain  
Aquca_016_00181.1|PACid:22062561   0.00000000011   25-95   MATH domain  
Aquca_016_00181.2|PACid:22062562   0.0000000000899   9-78   MATH domain  
Aquca_016_00186.1|PACid:22062749   3.6e-17   40-176   MATH domain  
  0.0000883   188-228   MATH domain  
Aquca_017_00398.1|PACid:22032561   8.01e-36   25-164   MATH domain  
Aquca_017_00668.1|PACid:22031232   1.01e-29   64-181   MATH domain  
Aquca_017_00668.2|PACid:22031233   8.67e-30   64-181   MATH domain  
Aquca_017_00668.3|PACid:22031234   8.34e-30   64-181   MATH domain  
Aquca_017_00669.1|PACid:22031621   1.42e-36   69-196   MATH domain  
Aquca_017_00669.2|PACid:22031622   1.34e-36   69-196   MATH domain  
Aquca_017_00669.3|PACid:22031623   1.34e-36   69-196   MATH domain  
Aquca_021_00015.1|PACid:22039603   2.62e-34   9-134   MATH domain  
Aquca_023_00177.1|PACid:22023241   0.0000000000589   72-116   SIAH, seven in absentia homolog  
Aquca_027_00003.1|PACid:22045953   1.96e-31   427-570   MATH domain  
  2.29e-30   87-227   MATH domain  
  5.4e-24   257-401   MATH domain  
  1.55e-19   594-719   MATH domain  
Aquca_027_00003.2|PACid:22045954   1.8e-31   427-570   MATH domain  
  1.96e-30   87-227   MATH domain  
  4.58e-24   257-401   MATH domain  
  1.32e-19   594-719   MATH domain  
Aquca_027_00003.3|PACid:22045955   9.65e-20   83-208   MATH domain  
  0.00000000213   4-59   MATH domain  
Aquca_027_00439.1|PACid:22045348   0.00000373   198-306   SIAH, seven in absentia homolog  
  0.0654   176-204   SIAH, seven in absentia homolog  
Aquca_027_00439.2|PACid:22045349   0.000000883   198-308   SIAH, seven in absentia homolog  
Aquca_034_00211.1|PACid:22056818   2.78e-32   142-271   MATH domain  
  2.62e-28   3-123   MATH domain  
Aquca_034_00420.1|PACid:22056626   2.78e-37   43-174   MATH domain  
Aquca_037_00025.1|PACid:22040662   0.00000196   445-559   MATH domain  
Aquca_037_00044.1|PACid:22040456   1.83e-19   63-136   SIAH, seven in absentia homolog  
Aquca_037_00058.1|PACid:22040387   1.44e-26   116-287   SIAH, seven in absentia homolog  
Aquca_042_00001.1|PACid:22032974   2.35e-24   69-230   SIAH, seven in absentia homolog  
Aquca_105_00002.1|PACid:22030881   1.63e-48   110-302   SIAH, seven in absentia homolog  
Aquca_105_00002.2|PACid:22030880   1.63e-48   110-302   SIAH, seven in absentia homolog  
Aquca_105_00002.3|PACid:22030879   1.63e-48   110-302   SIAH, seven in absentia homolog  
Aquca_105_00002.4|PACid:22030882   1.63e-48   110-302   SIAH, seven in absentia homolog  
 
Weak hits:
Aquca_004_00054.1|PACid:22030770   0.00111   174-226   SIAH, seven in absentia homolog  
  0.00314   212-296   SIAH, seven in absentia homolog  
Aquca_014_00231.1|PACid:22028064   0.00036   23-110   MATH domain  
Aquca_016_00187.1|PACid:22062933   0.00218   39-67   MATH domain  
Aquca_020_00162.1|PACid:22025154   0.085   175-203   SIAH, seven in absentia homolog  
Aquca_020_00162.2|PACid:22025153   0.085   175-203   SIAH, seven in absentia homolog  
Aquca_020_00162.3|PACid:22025155   0.085   175-203   SIAH, seven in absentia homolog  
Aquca_020_00528.1|PACid:22025161   0.00333   346-397   SIAH, seven in absentia homolog  
Aquca_032_00020.1|PACid:22057367   0.0785   410-483   SIAH, seven in absentia homolog  
Aquca_034_00234.1|PACid:22056445   0.0595   195-242   SIAH, seven in absentia homolog  
Aquca_034_00234.2|PACid:22056443   0.0595   195-242   SIAH, seven in absentia homolog  
Aquca_034_00234.3|PACid:22056444   0.0595   195-242   SIAH, seven in absentia homolog  

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Select to display   Genome       Domains   Proteins
No Yes ALL   96468 96468
No Yes Homo sapiens 76_38 Human 109 85
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 31 22
No Yes Gorilla gorilla 76_3.1 Western gorilla 39 30
No Yes Pongo abelii 76_2 Sumatran orangutan 32 22
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 40 27
No Yes Papio anubis 76 Olive baboon 34 25
No Yes Macaca mulatta 76_1 Rhesus monkey 53 38
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 76 56
No Yes Otolemur garnettii 76_3 Small-eared galago 41 32
No Yes Microcebus murinus 76_1 Gray mouse lemur 21 15
No Yes Rattus norvegicus 76_5.0 Norway rat 43 32
No Yes Mus musculus 76_38 House mouse 78 60
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 32 21
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 34 23
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 30 21
No Yes Cavia porcellus 76_3 Domestic guinea pig 52 41
No Yes Oryctolagus cuniculus 76_2 Rabbit 31 22
No Yes Ochotona princeps 76 American pika 25 17
No Yes Tupaia belangeri 76 Northern tree shrew 19 15
No Yes Sus scrofa 76_10.2 Pig 65 39
No Yes Bos taurus 76_3.1 Cattle 33 23
No Yes Ovis aries 76_3.1 Sheep 37 28
No Yes Vicugna pacos 76_1 Alpaca 18 13
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 31 21
No Yes Mustela putorius furo 76_1.0 Domestic ferret 33 23
No Yes Ailuropoda melanoleuca 76_1 Giant panda 42 26
No Yes Canis familiaris 76_3.1 Dog 39 29
No Yes Felis catus 76_6.2 Domestic cat 29 21
No Yes Equus caballus 76_2 Horse 29 22
No Yes Myotis lucifugus 76_2.0 Little brown bat 41 29
No Yes Pteropus vampyrus 76_1 Large flying fox 29 21
No Yes Sorex araneus 76_1 European shrew 21 15
No Yes Erinaceus europaeus 76 Western European hedgehog 26 20
No Yes Procavia capensis 76_1 Cape rock hyrax 26 20
No Yes Loxodonta africana 76_3 African savanna elephant 39 26
No Yes Echinops telfairi 76 Small Madagascar hedgehog 23 17
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 31 21
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 17 11
No Yes Macropus eugenii 76_1.0 Tammar wallaby 20 15
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 37 26
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 32 22
No Yes Ornithorhynchus anatinus 76_5 Platypus 25 17
No Yes Saccoglossus kowalevskii v3.0   127 69
No Yes Petromyzon marinus 76_7.0 Sea lamprey 19 13
No Yes Meleagris gallopavo 76_2 Turkey 38 26
No Yes Gallus gallus 76_4 Chicken 31 21
No Yes Anas platyrhynchos 76_1.0 Mallard 29 21
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 25 17
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 31 20
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 33 24
No Yes Anolis carolinensis 76_2.0 Green anole 30 22
No Yes Xenopus laevis African clawed frog 75 51
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 35 24
No Yes Latimeria chalumnae 76_1 Coelacanth 43 28
No Yes Lepisosteus oculatus 76 Spotted gar 43 28
No Yes Gadus morhua 76_1 Atlantic cod 31 25
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 41 31
No Yes Takifugu rubripes 76_4 Torafugu 123 79
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 50 39
No Yes Oryzias latipes 76_1 Japanese medaka 47 36
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 35 25
No Yes Poecilia formosa 76 Amazon molly 38 29
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 56 40
No Yes Astyanax mexicanus 76 Mexican tetra 46 32
No Yes Danio rerio 76_9 Zebrafish 73 48
No Yes Oikopleura dioica   13 13
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 30 23
No Yes Ciona intestinalis 76 Vase tunicate 21 16
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 31 26
No Yes Adineta vaga   134 121
No Yes Octopus bimaculoides 280   25 20
No Yes Crassostrea gigas 22 Pacific oyster 45 29
No Yes Lottia gigantea Owl limpet 34 30
No Yes Helobdella robusta   20 18
No Yes Capitella sp. I   31 23
No Yes Danaus plexippus OGS1.0 Monarch butterfly 16 13
No Yes Heliconius melpomene Postman butterfly 14 12
No Yes Bombyx mori Domestic silkworm 13 12
No Yes Nasonia vitripennis Jewel wasp 61 58
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 15 12
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 17 12
No Yes Linepithema humile v1.1 Argentine ant 18 13
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 16 12
No Yes Solenopsis invicta v.2.2.3 Red fire ant 14 10
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 14 11
No Yes Atta cephalotes v1.1   16 12
No Yes Camponotus floridanus v3.3 Florida carpenter ant 15 12
No Yes Lucilia cuprina Australian sheep blowfly 11 8
No Yes Drosophila grimshawi 1.3   15 12
No Yes Drosophila willistoni 1.3   17 14
No Yes Drosophila pseudoobscura 2.13   19 15
No Yes Drosophila persimilis 1.3   16 13
No Yes Drosophila suzukii   16 10
No Yes Drosophila yakuba 1.3   15 11
No Yes Drosophila simulans 1.3   14 10
No Yes Drosophila sechellia 1.3   16 12
No Yes Drosophila melanogaster 76_5 Fruit fly 35 25
No Yes Drosophila erecta 1.3   16 12
No Yes Drosophila ananassae 1.3   17 13
No Yes Drosophila virilis 1.2   16 13
No Yes Drosophila mojavensis 1.3   15 12
No Yes Megaselia scalaris 22   6 6
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 27 21
No Yes Culex pipiens quinquefasciatus Southern house mosquito 36 29
No Yes Anopheles darlingi 22 American malaria mosquito 19 13
No Yes Anopheles gambiae 49_3j African malaria mosquito 18 14
No Yes Tribolium castaneum 3.0 Red flour beetle 37 28
No Yes Pediculus humanus corporis (Early assembly) Human body louse 19 14
No Yes Acyrthosiphon pisum Pea aphid 9 7
No Yes Rhodnius prolixus 22   10 7
No Yes Daphnia pulex Common water flea 21 18
No Yes Strigamia maritima 22   78 56
No Yes Sarcoptes scabiei   10 9
No Yes Tetranychus urticae Two-spotted spider mite 18 14
No Yes Ixodes scapularis (Preliminary) Black-legged tick 68 56
No Yes Pristionchus pacificus   48 42
No Yes Meloidogyne incognita Southern root-knot nematode 30 30
No Yes Meloidogyne hapla   14 14
No Yes Onchocerca volvulus 22   11 11
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 12 12
No Yes Caenorhabditis japonica   15 15
No Yes Caenorhabditis brenneri   105 95
No Yes Caenorhabditis remanei   99 94
No Yes Caenorhabditis elegans 76_235 Roundworm 214 128
No Yes Caenorhabditis briggsae 2   62 56
No Yes Trichinella spiralis 22   8 7
No Yes Hymenolepis microstoma   8 6
No Yes Echinococcus multilocularis   16 13
No Yes Echinococcus granulosus   15 13
No Yes Taenia solium Pork tapeworm 20 17
No Yes Schistosoma mansoni   11 9
No Yes Mnemiopsis leidyi Sea walnut 13 12
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   80 58
No Yes Nematostella vectensis 1.0 Starlet sea anemone 71 44
No Yes Hydra vulgaris   47 36
No Yes Amphimedon queenslandica   442 246
No Yes Trichoplax adhaerens   13 9
No Yes Proterospongia sp. ATCC 50818   7 7
No Yes Monosiga brevicollis   12 10
No Yes Sphaeroforma arctica JP610   8 5
No Yes Capsaspora owczarzaki ATCC 30864   4 3
No Yes Conidiobolus coronatus NRRL28638 v1.0   3 3
No Yes Mortierella verticillata NRRL 6337   7 6
No Yes Phycomyces blakesleeanus   11 11
No Yes Rhizopus oryzae RA 99-880   5 5
No Yes Mucor circinelloides   6 5
No Yes Rhizomucor miehei CAU432   5 5
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   3 3
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   4 4
No Yes Melampsora laricis-populina   2 2
No Yes Rhodotorula graminis WP1 v1.0   3 3
No Yes Sporobolomyces roseus IAM 13481   5 4
No Yes Microbotryum violaceum 22   2 2
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   4 4
No Yes Piloderma croceum F 1598 v1.0   3 3
No Yes Serpula lacrymans var. lacrymans S7.9   2 2
No Yes Coniophora puteana   4 3
No Yes Hydnomerulius pinastri v2.0   5 4
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   4 3
No Yes Pisolithus microcarpus 441 v1.0   4 4
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   4 3
No Yes Coprinopsis cinerea okayama7 130 v3   4 4
No Yes Pleurotus ostreatus Oyster mushroom 4 3
No Yes Amanita thiersii Skay4041 v1.0   3 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 3 3
No Yes Galerina marginata v1.0   5 5
No Yes Hebeloma cylindrosporum h7 v2.0   3 3
No Yes Laccaria bicolor S238N-H82   3 3
No Yes Agaricus bisporus var. bisporus   2 2
No Yes Schizophyllum commune   3 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   4 3
No Yes Heterobasidion annosum   3 3
No Yes Gloeophyllum trabeumv1.0   5 5
No Yes Punctularia strigosozonata v1.0   4 3
No Yes Sebacina vermifera MAFF 305830 v1.0   7 6
No Yes Fomitiporia mediterranea v1.0   4 3
No Yes Tulasnella calospora AL13/4D v1.0   4 3
No Yes Postia placenta   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   3 3
No Yes Fomitopsis pinicolav1.0   4 4
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   4 4
No Yes Phanerochaete chrysosporium RP-78 2.1   3 3
No Yes Dichomitus squalens   3 3
No Yes Trametes versicolor v1.0   3 3
No Yes Tremella mesenterica Witches' butter 4 3
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   2 2
No Yes Sporotrichum thermophile ATCC 42464   2 2
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   2 2
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   3 2
No Yes Neurospora crassa OR74A   2 2
No Yes Cryphonectria parasitica Chestnut blight fungus 3 2
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   3 2
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Glomerella graminicola 22   2 2
No Yes Fusarium graminearum   2 2
No Yes Nectria haematococca mpVI   2 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   2 2
No Yes Fusarium verticillioides 7600   2 2
No Yes Trichoderma asperellum CBS 433.97 v1.0   2 2
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   2 2
No Yes Trichoderma virens Gv29-8   2 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   2 2
No Yes Trichoderma harzianum CBS 226.95 v1.0   2 2
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Blumeria graminis 22   2 2
No Yes Didymella exigua CBS 183.55 v1.0   3 3
No Yes Leptosphaeria maculans 22   3 3
No Yes Setosphaeria turcica v1.0   3 3
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 3
No Yes Alternaria brassicicola   3 3
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   3 3
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   3 3
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   4 3
No Yes Paracoccidioides brasiliensis Pb18   5 4
No Yes Coccidioides posadasii RMSCC 3488   3 3
No Yes Coccidioides immitis RS   3 3
No Yes Ajellomyces dermatitidis SLH14081   4 4
No Yes Histoplasma capsulatum class NAmI strain WU24   4 4
No Yes Microsporum canis CBS 113480   4 4
No Yes Trichophyton equinum CBS 127.97   5 4
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   2 2
No Yes Trichophyton tonsurans CBS 112818   5 4
No Yes Trichophyton rubrum CBS 118892   4 4
No Yes Uncinocarpus reesii 1704   3 3
No Yes Aspergillus zonatus v1.0   4 3
No Yes Penicillium chrysogenum Wisconsin 54-1255   4 3
No Yes Penicillium chrysogenum v1.0   4 3
No Yes Aspergillus acidus v1.0   4 3
No Yes Aspergillus fumigatus Af293   4 3
No Yes Aspergillus brasiliensis v1.0   4 3
No Yes Aspergillus nidulans FGSC A4   4 3
No Yes Aspergillus sydowii v1.0   4 3
No Yes Aspergillus versicolor v1.0   4 3
No Yes Aspergillus glaucus   4 3
No Yes Aspergillus carbonarius ITEM 5010   4 3
No Yes Neosartorya fischeri NRRL 181   6 4
No Yes Aspergillus terreus NIH2624   4 3
No Yes Aspergillus tubingensis v1.0   4 3
No Yes Aspergillus wentii v1.0   4 3
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   5 3
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   4 3
No Yes Aspergillus clavatus NRRL 1   4 3
No Yes Penicillium marneffei ATCC 18224   4 3
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0   3 2
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Pichia membranifaciensv1.0   3 2
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   2 2
No Yes Candida dubliniensis CD36   2 2
No Yes Candida tropicalis MYA-3404   2 2
No Yes Candida parapsilosis   2 2
No Yes Candida albicans SC5314   2 2
No Yes Lodderomyces elongisporus NRRL YB-4239   2 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   2 2
No Yes Candida guilliermondii ATCC 6260   2 2
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   2 2
No Yes Debaromyces hansenii   2 2
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   3 2
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   3 2
No Yes Candida lusitaniae ATCC 42720   2 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   2 2
No Yes Schizosaccharomyces octosporus yFS286   2 2
No Yes Schizosaccharomyces japonicus yFS275   2 2
No Yes Schizosaccharomyces pombe Fission yeast 2 2
No Yes Catenaria anguillulae PL171 v1.0   5 5
No Yes Allomyces macrogynus ATCC 38327   10 10
No Yes Spizellomyces punctatus DAOM BR117   8 6
No Yes Dictyostelium discoideum   74 40
No Yes Dictyostelium purpureum   103 50
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   36 29
No Yes Pinus taeda Loblolly pine 30 23
No Yes Picea abies Norway spruce 20 15
No Yes Eucalyptus grandis v201 Rose gum 135 92
No Yes Theobroma cacao B97-61/B2 v1 Cacao 46 33
No Yes Gossypium raimondii v221   170 143
No Yes Citrus clementina v165   125 86
No Yes Citrus sinensis v154 Sweet orange 100 80
No Yes Thellungiella halophila v173   148 115
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 175 132
No Yes Capsella rubella v183   135 111
No Yes Arabidopsis lyrata Lyrate rockcress 173 129
No Yes Arabidopsis thaliana 10 Thale cress 166 119
No Yes Carica papaya Papaya 43 29
No Yes Medicago truncatula Barrel medic 87 78
No Yes Phaseolus vulgaris v186 French bean 53 47
No Yes Glycine max v109 Soybean 91 81
No Yes Cucumis sativus v122 Cucumber 44 37
No Yes Fragaria vesca Wild strawberry 80 51
No Yes Malus domestica v196 Apple 153 113
No Yes Prunus persica v139 Peach 62 48
No Yes Linum usitatissimum v200 Flax 50 43
No Yes Manihot esculenta v147 Cassava 64 54
No Yes Populus trichocarpa v156 Black cottonwood 92 63
No Yes Vitis vinifera Wine grape 43 31
No Yes Mimulus guttatus v140 Spotted monkey flower 280 175
No Yes Solanum lycopersicum v.2.3 Tomato 43 39
No Yes Solanum tuberosum Potato 82 66
No Yes Actinidia chinensis Hongyang   52 43
No Yes Aquilegia coerulea v195   97 76
No Yes Triticum urartu 22   171 155
No Yes Triticum aestivum 22 Bread wheat 201 180
No Yes Aegilops tauschii 22   375 353
No Yes Brachypodium distachyon Stiff brome 132 124
No Yes Oryza barthii 22 African wild rice 187 122
No Yes Oryza meridionalis 22   168 121
No Yes Oryza glumaepatula 22   192 141
No Yes Oryza glaberrima African rice 124 123
No Yes Oryza punctata 22   154 115
No Yes Oryza nivara 22   180 136
No Yes Oryza brachyantha 22 Malo sina 76 70
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 171 165
No Yes Oryza sativa v193 Rice 170 164
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 56 48
No Yes Panicum virgatum v202 Switchgrass 399 382
No Yes Setaria italica v164 Foxtail millet 166 156
No Yes Zea mays subsp. mays Maize 122 109
No Yes Zea mays v181 Maize 124 111
No Yes Sorghum bicolor Sorghum 186 175
No Yes Musa balbisiana Balbis banana 43 35
No Yes Musa acuminata 22 Wild Malaysian banana 36 33
No Yes Amborella trichopoda 22   22 19
No Yes Physcomitrella patens   21 17
No Yes Coccomyxa subellipsoidea sp. C-169 v2   7 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   9 6
No Yes Chlorella variabilis sp. NC64A   5 5
No Yes Chlorella vulgaris   7 4
No Yes Volvox carteri f. nagariensis   6 5
No Yes Volvox carteri v199   5 5
No Yes Chlamydomonas reinhardtii 4.0   9 9
No Yes Ostreococcus sp. RCC809   8 7
No Yes Ostreococcus lucimarinus CCE9901   8 7
No Yes Ostreococcus tauri   8 5
No Yes Bathycoccus prasinos   2 2
No Yes Micromonas sp. RCC299   11 8
No Yes Micromonas pusilla CCMP1545 v3.0   15 10
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   7 7
No Yes Bigelowiella natans CCMP2755 22   12 12
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   43 36
No Yes Leishmania mexicana 2.4   6 4
No Yes Leishmania major strain Friedlin   6 4
No Yes Leishmania infantum JPCM5 2.4   5 4
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   7 6
No Yes Trypanosoma vivax   4 4
No Yes Trypanosoma cruzi strain CL Brener   2 2
No Yes Trypanosoma congolense 2.4   2 2
No Yes Trypanosoma brucei gambiense v4.1   5 5
No Yes Trypanosoma brucei TREU927 v4.1   5 5
No Yes Ectocarpus siliculosus   13 7
No Yes Aureococcus anophagefferens   9 8
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   7 5
No Yes Pythium arrhenomanes ATCC 12531 22   8 6
No Yes Pythium ultimum v1.7-2   9 5
No Yes Pythium aphanidermatum DAOM BR444 22   11 7
No Yes Pythium irregulare DAOM BR486 22   8 6
No Yes Pythium vexans DAOM BR484 22   7 5
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 7 5
No Yes Phytophthora sojae 1.1   6 5
No Yes Phytophthora infestans T30-4   13 8
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   24 24
No Yes Thalassiosira pseudonana CCMP1335   5 5
No Yes Perkinsus marinus ATCC 50983   6 4
No Yes Paramecium tetraurelia   33 28
No Yes Tetrahymena thermophila SB210 1   27 23
No Yes Ichthyophthirius multifiliis strain G5   3 3
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   3 3
No Yes Cryptosporidium parvum Iowa II   3 3
No Yes Neospora caninum   5 4
No Yes Toxoplasma gondii VEG   4 4
No Yes Toxoplasma gondii ME49   5 5
No Yes Toxoplasma gondii GT1   4 4
No Yes Babesia bovis T2Bo   6 6
No Yes Theileria parva   3 3
No Yes Theileria annulata   3 3
No Yes Plasmodium falciparum 3D7   4 4
No Yes Plasmodium vivax SaI-1 7.0   4 4
No Yes Plasmodium knowlesi strain H   4 4
No Yes Plasmodium yoelii ssp. yoelii 1   4 4
No Yes Plasmodium chabaudi   4 4
No Yes Plasmodium berghei ANKA   4 4
No Yes Symbiodinium minutum clade B1 v1.2   40 37
No Yes Naegleria gruberi   8 7
No Yes Trichomonas vaginalis   4 4
No Yes Guillardia theta CCMP2712 v1.0   12 10
No Yes Emiliania huxleyi CCMP1516   43 42
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 59 40
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 30 20
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 22 16
No Yes Ascaris suum Victoria/Ghent Pig roundworm 18 18
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 185 100
No Yes Cryptococcus neoformans var. grubii H99   3 3
No Yes Cryptococcus neoformans B-3501A   4 3
No Yes Cryptococcus neoformans JEC21   3 2
No Yes Paracoccidioides brasiliensis Pb01   5 4
No Yes Paracoccidioides brasiliensis Pb03   4 3
No Yes Coccidioides posadasii str. Silveira   3 3
No Yes Coccidioides immitis RMSCC 3703   3 3
No Yes Coccidioides immitis RMSCC 2394   3 3
No Yes Coccidioides immitis H538.4   3 3
No Yes Ajellomyces dermatitidis ER-3   4 4
No Yes Histoplasma capsulatum H143   5 4
No Yes Histoplasma capsulatum H88   4 4
No Yes Histoplasma capsulatum G186AR   4 4
No Yes Aspergillus fumigatus A1163   4 3
No Yes Candida albicans WO-1   2 2
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Schizosaccharomyces pombe 972h-   2 2
No Yes Batrachochytrium dendrobatidis JEL423   7 6
No Yes Batrachochytrium dendrobatidis JAM81   4 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 46 32
No Yes Hordeum vulgare 22 Domesticated barley 168 152
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 202 188
No Yes Trypanosoma brucei Lister 427 v4.1   5 5
No Yes Neospora caninum Nc-Liverpool 6.2   5 4
No Yes Plasmodium falciparum HB3   4 4
No Yes Plasmodium falciparum Dd2   4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 112 88
No Yes Homo sapiens (NCBI version) Human 60 41
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 48 37
No Yes Heliconius numata (Incomplete)   6 6
No Yes Loa loa v3.3 (Request) Eye worm 14 14
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 9 9
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 10 10
No Yes Picea sitchensis (Incomplete) Sitka spruce 3 3
No Yes Lotus japonicus (Early assembly)   34 31
No Yes Malus x domestica (Duplicate) Apple 154 114
No Yes Ricinus communis (Early assembly) Castor bean 26 22
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   77 63
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 43 39
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 43 39
No Yes Phoenix dactylifera (Early draft) Date palm 23 21
No Yes Homo sapiens 69_37 Human 32 23
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 31 22
No Yes Gorilla gorilla 69_3.1 Western gorilla 32 24
No Yes Pongo abelii 69_2 Sumatran orangutan 32 22
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 32 22
No Yes Macaca mulatta 69_1 Rhesus monkey 35 25
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 33 24
No Yes Otolemur garnettii 69_3 Small-eared galago 41 32
No Yes Microcebus murinus 69_1 Gray mouse lemur 21 15
No Yes Rattus norvegicus 69_3.4 Norway rat 33 24
No Yes Mus musculus 69_38 House mouse 48 37
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 32 21
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 32 22
No Yes Cavia porcellus 69_3 Domestic guinea pig 51 40
No Yes Oryctolagus cuniculus 69_2 Rabbit 24 17
No Yes Ochotona princeps 69 American pika 25 17
No Yes Tupaia belangeri 69 Northern tree shrew 19 15
No Yes Sus scrofa 69_10.2 Pig 41 26
No Yes Bos taurus 69_3.1 Cattle 33 23
No Yes Vicugna pacos 69_1 Alpaca 18 13
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 31 21
No Yes Mustela putorius furo 69_1.0 Domestic ferret 33 23
No Yes Ailuropoda melanoleuca 69_1 Giant panda 33 22
No Yes Canis familiaris 69_3.1 Dog 30 21
No Yes Felis catus 69 Domestic cat 24 18
No Yes Equus caballus 69_2 Horse 28 21
No Yes Myotis lucifugus 69_2.0 Little brown bat 37 27
No Yes Pteropus vampyrus 69_1 Large flying fox 29 21
No Yes Sorex araneus 69_1 European shrew 21 15
No Yes Erinaceus europaeus 69 Western European hedgehog 26 20
No Yes Procavia capensis 69_1 Cape rock hyrax 26 20
No Yes Loxodonta africana 69_3 African savanna elephant 32 21
No Yes Echinops telfairi 69 Small Madagascar hedgehog 23 17
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 17 13
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 17 11
No Yes Macropus eugenii 69_1.0 Tammar wallaby 20 15
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 31 22
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 29 19
No Yes Ornithorhynchus anatinus 69_5 Platypus 24 16
No Yes Petromyzon marinus 69_7.0 Sea lamprey 19 13
No Yes Meleagris gallopavo 69_2 Turkey 29 20
No Yes Gallus gallus 69_2 Chicken 28 20
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 25 17
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 30 22
No Yes Anolis carolinensis 69_2.0 Green anole 27 21
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 30 21
No Yes Latimeria chalumnae 69_1 Coelacanth 41 27
No Yes Gadus morhua 69_1 Atlantic cod 31 25
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 37 28
No Yes Takifugu rubripes 69_4 Torafugu 35 24
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 39 29
No Yes Oryzias latipes 69_1 Japanese medaka 36 25
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 35 25
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 44 32
No Yes Danio rerio 69_9 Zebrafish 53 32
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 22 18
No Yes Ciona intestinalis 69 Vase tunicate 21 16
No Yes Drosophila melanogaster 69_5 Fruit fly 15 11
No Yes Caenorhabditis elegans 69_215 Roundworm 161 87
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 132 92
No Yes Endophytic microbiome from Rice (meta-genome)   5 5
No Yes NCBI 2017_08 genome   32940 24133
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   112 106
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   3 3
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   3319 2599
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   32646 26213
No Yes Global Ocean Sampling Expedition (GOS)   42 34
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   14 14
No Yes Protein Data Bank (all PDB sequenc)   160 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   424 424
No Yes TargetDB (Targets)   192 143
No Yes UniProt viral sequences (Viral)   3 3

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