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SMAD/FHA domain superfamily domain assignments
in
Bifidobacterium adolescentis ATCC 15703

Assignment details

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Bifidobacterium adolescentis ATCC 15703 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|119025061|ref|YP_908906.1|   2.3e-26   58-170   FHA domain  
gi|119025062|ref|YP_908907.1|   3.25e-24   146-231   FHA domain  
gi|119025304|ref|YP_909149.1|   0.0000000000604   24-119   FHA domain  
gi|119025841|ref|YP_909686.1|   1.05e-31   22-138   FHA domain  
gi|119026335|ref|YP_910180.1|   0.00000000000000249   113-220   FHA domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   321677 321677
No Yes Homo sapiens 76_38 Human 278 278
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 49 49
No Yes Gorilla gorilla 76_3.1 Western gorilla 71 71
No Yes Pongo abelii 76_2 Sumatran orangutan 50 50
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 52 52
No Yes Papio anubis 76 Olive baboon 50 50
No Yes Macaca mulatta 76_1 Rhesus monkey 95 95
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 108 108
No Yes Otolemur garnettii 76_3 Small-eared galago 53 53
No Yes Microcebus murinus 76_1 Gray mouse lemur 40 37
No Yes Rattus norvegicus 76_5.0 Norway rat 56 56
No Yes Mus musculus 76_38 House mouse 129 129
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 40 39
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 48 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 52 52
No Yes Cavia porcellus 76_3 Domestic guinea pig 44 44
No Yes Oryctolagus cuniculus 76_2 Rabbit 53 53
No Yes Ochotona princeps 76 American pika 40 40
No Yes Tupaia belangeri 76 Northern tree shrew 32 32
No Yes Sus scrofa 76_10.2 Pig 66 66
No Yes Bos taurus 76_3.1 Cattle 62 62
No Yes Ovis aries 76_3.1 Sheep 58 58
No Yes Vicugna pacos 76_1 Alpaca 26 26
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 47 47
No Yes Mustela putorius furo 76_1.0 Domestic ferret 52 52
No Yes Ailuropoda melanoleuca 76_1 Giant panda 58 58
No Yes Canis familiaris 76_3.1 Dog 80 80
No Yes Felis catus 76_6.2 Domestic cat 55 55
No Yes Equus caballus 76_2 Horse 62 62
No Yes Myotis lucifugus 76_2.0 Little brown bat 45 45
No Yes Pteropus vampyrus 76_1 Large flying fox 49 48
No Yes Sorex araneus 76_1 European shrew 30 27
No Yes Erinaceus europaeus 76 Western European hedgehog 32 31
No Yes Procavia capensis 76_1 Cape rock hyrax 45 43
No Yes Loxodonta africana 76_3 African savanna elephant 64 64
No Yes Echinops telfairi 76 Small Madagascar hedgehog 39 38
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 66 66
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 28 27
No Yes Macropus eugenii 76_1.0 Tammar wallaby 39 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 59 59
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 58 58
No Yes Ornithorhynchus anatinus 76_5 Platypus 41 41
No Yes Saccoglossus kowalevskii v3.0   79 79
No Yes Petromyzon marinus 76_7.0 Sea lamprey 25 25
No Yes Meleagris gallopavo 76_2 Turkey 51 51
No Yes Gallus gallus 76_4 Chicken 46 46
No Yes Anas platyrhynchos 76_1.0 Mallard 50 50
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 41 41
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 40 40
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 51 51
No Yes Anolis carolinensis 76_2.0 Green anole 49 49
No Yes Xenopus laevis African clawed frog 123 123
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 67 67
No Yes Latimeria chalumnae 76_1 Coelacanth 60 60
No Yes Lepisosteus oculatus 76 Spotted gar 63 63
No Yes Gadus morhua 76_1 Atlantic cod 59 59
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 83 83
No Yes Takifugu rubripes 76_4 Torafugu 228 228
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 84 84
No Yes Oryzias latipes 76_1 Japanese medaka 71 71
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 63 63
No Yes Poecilia formosa 76 Amazon molly 67 67
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 91 91
No Yes Astyanax mexicanus 76 Mexican tetra 64 64
No Yes Danio rerio 76_9 Zebrafish 121 121
No Yes Oikopleura dioica   29 29
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 60 59
No Yes Ciona intestinalis 76 Vase tunicate 31 31
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 50 46
No Yes Adineta vaga   72 72
No Yes Octopus bimaculoides 280   65 65
No Yes Crassostrea gigas 22 Pacific oyster 38 38
No Yes Lottia gigantea Owl limpet 33 33
No Yes Helobdella robusta   24 23
No Yes Capitella sp. I   37 37
No Yes Danaus plexippus OGS1.0 Monarch butterfly 23 23
No Yes Heliconius melpomene Postman butterfly 22 22
No Yes Bombyx mori Domestic silkworm 21 21
No Yes Nasonia vitripennis Jewel wasp 18 18
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 33 33
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 23 23
No Yes Linepithema humile v1.1 Argentine ant 26 26
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 27 27
No Yes Solenopsis invicta v.2.2.3 Red fire ant 23 22
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 25 25
No Yes Atta cephalotes v1.1   22 22
No Yes Camponotus floridanus v3.3 Florida carpenter ant 23 23
No Yes Lucilia cuprina Australian sheep blowfly 25 25
No Yes Drosophila grimshawi 1.3   24 24
No Yes Drosophila willistoni 1.3   25 25
No Yes Drosophila pseudoobscura 2.13   28 28
No Yes Drosophila persimilis 1.3   27 27
No Yes Drosophila suzukii   26 25
No Yes Drosophila yakuba 1.3   26 26
No Yes Drosophila simulans 1.3   25 25
No Yes Drosophila sechellia 1.3   24 24
No Yes Drosophila melanogaster 76_5 Fruit fly 60 60
No Yes Drosophila erecta 1.3   25 25
No Yes Drosophila ananassae 1.3   26 26
No Yes Drosophila virilis 1.2   25 25
No Yes Drosophila mojavensis 1.3   23 23
No Yes Megaselia scalaris 22   15 15
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 27 27
No Yes Culex pipiens quinquefasciatus Southern house mosquito 28 28
No Yes Anopheles darlingi 22 American malaria mosquito 21 20
No Yes Anopheles gambiae 49_3j African malaria mosquito 24 24
No Yes Tribolium castaneum 3.0 Red flour beetle 25 25
No Yes Pediculus humanus corporis (Early assembly) Human body louse 26 26
No Yes Acyrthosiphon pisum Pea aphid 27 27
No Yes Rhodnius prolixus 22   19 19
No Yes Daphnia pulex Common water flea 30 30
No Yes Strigamia maritima 22   30 30
No Yes Sarcoptes scabiei   19 19
No Yes Tetranychus urticae Two-spotted spider mite 21 21
No Yes Ixodes scapularis (Preliminary) Black-legged tick 19 19
No Yes Pristionchus pacificus   22 21
No Yes Meloidogyne incognita Southern root-knot nematode 22 22
No Yes Meloidogyne hapla   9 9
No Yes Onchocerca volvulus 22   21 21
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 27 27
No Yes Caenorhabditis japonica   19 19
No Yes Caenorhabditis brenneri   25 24
No Yes Caenorhabditis remanei   23 23
No Yes Caenorhabditis elegans 76_235 Roundworm 40 40
No Yes Caenorhabditis briggsae 2   20 20
No Yes Trichinella spiralis 22   15 15
No Yes Hymenolepis microstoma   31 31
No Yes Echinococcus multilocularis   23 23
No Yes Echinococcus granulosus   23 23
No Yes Taenia solium Pork tapeworm 21 21
No Yes Schistosoma mansoni   29 29
No Yes Mnemiopsis leidyi Sea walnut 27 27
No Yes Thelohanellus kitauei   6 6
No Yes Acropora digitifera v1.0   35 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 35 33
No Yes Hydra vulgaris   28 28
No Yes Amphimedon queenslandica   30 30
No Yes Trichoplax adhaerens   25 25
No Yes Proterospongia sp. ATCC 50818   27 27
No Yes Monosiga brevicollis   16 16
No Yes Sphaeroforma arctica JP610   9 9
No Yes Capsaspora owczarzaki ATCC 30864   18 18
No Yes Conidiobolus coronatus NRRL28638 v1.0   6 6
No Yes Mortierella verticillata NRRL 6337   19 18
No Yes Phycomyces blakesleeanus   22 22
No Yes Rhizopus oryzae RA 99-880   24 24
No Yes Mucor circinelloides   19 19
No Yes Rhizomucor miehei CAU432   20 20
No Yes Malassezia globosa CBS 7966   8 8
No Yes Sporisorium reilianum 22   7 7
No Yes Ustilago maydis   6 6
No Yes Mixia osmundae IAM 14324 v1.0   11 11
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   10 10
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   7 7
No Yes Melampsora laricis-populina   8 8
No Yes Rhodotorula graminis WP1 v1.0   8 8
No Yes Sporobolomyces roseus IAM 13481   7 7
No Yes Microbotryum violaceum 22   10 10
No Yes Wallemia sebi v1.0   8 8
No Yes Sphaerobolus stellatus v1.0   15 15
No Yes Piloderma croceum F 1598 v1.0   16 16
No Yes Serpula lacrymans var. lacrymans S7.9   10 10
No Yes Coniophora puteana   27 27
No Yes Hydnomerulius pinastri v2.0   11 11
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   11 11
No Yes Pisolithus microcarpus 441 v1.0   10 10
No Yes Pisolithus tinctorius Marx 270 v1.0   10 10
No Yes Scleroderma citrinum Foug A v1.0   14 14
No Yes Coprinopsis cinerea okayama7 130 v3   10 10
No Yes Pleurotus ostreatus Oyster mushroom 13 13
No Yes Amanita thiersii Skay4041 v1.0   10 10
No Yes Amanita muscaria Koide v1.0 Fly agaric 15 15
No Yes Galerina marginata v1.0   15 15
No Yes Hebeloma cylindrosporum h7 v2.0   11 11
No Yes Laccaria bicolor S238N-H82   13 13
No Yes Agaricus bisporus var. bisporus   8 8
No Yes Schizophyllum commune   11 11
No Yes Stereum hirsutum FP-91666 SS1 v1.0   12 12
No Yes Heterobasidion annosum   11 11
No Yes Gloeophyllum trabeumv1.0   11 11
No Yes Punctularia strigosozonata v1.0   11 11
No Yes Sebacina vermifera MAFF 305830 v1.0   17 17
No Yes Fomitiporia mediterranea v1.0   10 10
No Yes Tulasnella calospora AL13/4D v1.0   13 13
No Yes Postia placenta   17 17
No Yes Wolfiporia cocos MD-104 SS10 v1.0   10 10
No Yes Fomitopsis pinicolav1.0   10 10
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   10 10
No Yes Phanerochaete chrysosporium RP-78 2.1   12 12
No Yes Dichomitus squalens   13 13
No Yes Trametes versicolor v1.0   15 15
No Yes Tremella mesenterica Witches' butter 9 9
No Yes Daldinia eschscholzii EC12 v1.0   11 11
No Yes Apiospora montagnei NRRL 25634 v1.0   12 12
No Yes Magnaporthe poae ATCC 64411 22   8 8
No Yes Magnaporthe grisea 70-15   12 12
No Yes Podospora anserina   9 9
No Yes Sporotrichum thermophile ATCC 42464   12 12
No Yes Thielavia terrestris NRRL 8126   12 12
No Yes Chaetomium globosum CBS 148.51   11 11
No Yes Neurospora tetrasperma   9 9
No Yes Neurospora discreta FGSC 8579   11 11
No Yes Neurospora crassa OR74A   10 10
No Yes Cryphonectria parasitica Chestnut blight fungus 10 10
No Yes Verticillium albo-atrum VaMs.102   12 12
No Yes Verticillium dahliae VdLs.17   12 12
No Yes Acremonium alcalophilumv 1.0   10 10
No Yes Glomerella graminicola 22   11 11
No Yes Fusarium graminearum   10 10
No Yes Nectria haematococca mpVI   14 14
No Yes Fusarium oxysporum f. sp. lycopersici 4286   9 9
No Yes Fusarium verticillioides 7600   9 9
No Yes Trichoderma asperellum CBS 433.97 v1.0   12 12
No Yes Trichoderma atroviride   12 12
No Yes Trichoderma citrinoviride v1.0   12 12
No Yes Trichoderma reesei 1.2   12 12
No Yes Trichoderma virens Gv29-8   13 13
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   12 12
No Yes Trichoderma harzianum CBS 226.95 v1.0   12 12
No Yes Amorphotheca resinae v1.0 Creosote fungus 12 12
No Yes Botrytis cinerea B05.10   10 10
No Yes Sclerotinia sclerotiorum   8 8
No Yes Blumeria graminis 22   8 8
No Yes Didymella exigua CBS 183.55 v1.0   11 11
No Yes Leptosphaeria maculans 22   10 10
No Yes Setosphaeria turcica v1.0   10 10
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   10 10
No Yes Cochliobolus victoriae FI3 v1.0   10 10
No Yes Cochliobolus carbonum 26-R-13 v1.0   10 10
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 9 9
No Yes Alternaria brassicicola   8 8
No Yes Cochliobolus lunatus m118 v2.0   11 11
No Yes Pyrenophora teres f. teres 22   11 11
No Yes Pyrenophora tritici-repentis   11 11
No Yes Stagonospora nodorum   11 11
No Yes Mycosphaerella graminicola IPO323   10 10
No Yes Zasmidium cellare ATCC 36951 v1.0   11 11
No Yes Dothistroma septosporum   10 9
No Yes Septoria musiva v1.0   11 10
No Yes Mycosphaerella fijiensis CIRAD86   9 9
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   11 11
No Yes Paracoccidioides brasiliensis Pb18   9 9
No Yes Coccidioides posadasii RMSCC 3488   12 12
No Yes Coccidioides immitis RS   12 12
No Yes Ajellomyces dermatitidis SLH14081   14 14
No Yes Histoplasma capsulatum class NAmI strain WU24   12 12
No Yes Microsporum canis CBS 113480   12 12
No Yes Trichophyton equinum CBS 127.97   9 9
No Yes Trichophyton verrucosum HKI 0517   12 12
No Yes Arthroderma benhamiae CBS 112371   12 12
No Yes Trichophyton tonsurans CBS 112818   11 11
No Yes Trichophyton rubrum CBS 118892   12 12
No Yes Uncinocarpus reesii 1704   11 11
No Yes Aspergillus zonatus v1.0   11 11
No Yes Penicillium chrysogenum Wisconsin 54-1255   10 10
No Yes Penicillium chrysogenum v1.0   10 10
No Yes Aspergillus acidus v1.0   11 11
No Yes Aspergillus fumigatus Af293   8 8
No Yes Aspergillus brasiliensis v1.0   11 11
No Yes Aspergillus nidulans FGSC A4   10 10
No Yes Aspergillus sydowii v1.0   10 10
No Yes Aspergillus versicolor v1.0   11 11
No Yes Aspergillus glaucus   11 11
No Yes Aspergillus carbonarius ITEM 5010   10 10
No Yes Neosartorya fischeri NRRL 181   11 11
No Yes Aspergillus terreus NIH2624   9 9
No Yes Aspergillus tubingensis v1.0   11 11
No Yes Aspergillus wentii v1.0   11 11
No Yes Aspergillus oryzae RIB40   10 10
No Yes Aspergillus niger 22   10 10
No Yes Aspergillus niger ATCC 1015   5 5
No Yes Aspergillus flavus NRRL3357   9 9
No Yes Aspergillus clavatus NRRL 1   11 11
No Yes Penicillium marneffei ATCC 18224   11 11
No Yes Tuber melanosporum Mel28 22   12 11
No Yes Tuber melanosporum Vittad Perigord truffle 13 12
No Yes Hansenula polymorpha v2.0   10 9
No Yes Dekkera bruxellensis CBS 2499 v2.0   10 9
No Yes Pichia membranifaciensv1.0   11 10
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   10 9
No Yes Candida dubliniensis CD36   11 10
No Yes Candida tropicalis MYA-3404   10 9
No Yes Candida parapsilosis   9 8
No Yes Candida albicans SC5314   9 8
No Yes Lodderomyces elongisporus NRRL YB-4239   9 9
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   11 10
No Yes Pichia stipitis CBS 6054   9 8
No Yes Candida guilliermondii ATCC 6260   8 7
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   9 8
No Yes Debaromyces hansenii   11 10
No Yes Wickerhamomyces anomalus   11 10
No Yes Pichia pastoris GS115   10 9
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   9 8
No Yes Yarrowia lipolytica CLIB122   9 8
No Yes Candida lusitaniae ATCC 42720   9 8
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   9 8
No Yes Vanderwaltozyma polyspora DSM 70294   14 13
No Yes Candida glabrata CBS138   13 12
No Yes Kluyveromyces thermotolerans CBS 6340   11 10
No Yes Lachancea kluyveri   11 10
No Yes Kluyveromyces waltii   10 9
No Yes Ashbya gossypii ATCC 10895   12 11
No Yes Zygosaccharomyces rouxii   11 10
No Yes Saccharomyces mikatae MIT   13 12
No Yes Saccharomyces paradoxus MIT   16 15
No Yes Saccharomyces cerevisiae 76 Baker's yeast 16 15
No Yes Saccharomyces bayanus MIT   13 12
No Yes Kluyveromyces lactis   11 10
No Yes Schizosaccharomyces cryophilus OY26 22   8 8
No Yes Schizosaccharomyces octosporus yFS286   8 8
No Yes Schizosaccharomyces japonicus yFS275   8 8
No Yes Schizosaccharomyces pombe Fission yeast 8 8
No Yes Catenaria anguillulae PL171 v1.0   12 12
No Yes Allomyces macrogynus ATCC 38327   23 22
No Yes Spizellomyces punctatus DAOM BR117   20 19
No Yes Dictyostelium discoideum   26 25
No Yes Dictyostelium purpureum   22 22
No Yes Entamoeba dispar 1.2   23 23
No Yes Entamoeba invadens 1.2   22 22
No Yes Entamoeba histolytica 1   24 24
No Yes Selaginella moellendorffii   19 19
No Yes Pinus taeda Loblolly pine 9 9
No Yes Picea abies Norway spruce 6 6
No Yes Eucalyptus grandis v201 Rose gum 26 26
No Yes Theobroma cacao B97-61/B2 v1 Cacao 19 19
No Yes Gossypium raimondii v221   64 64
No Yes Citrus clementina v165   27 27
No Yes Citrus sinensis v154 Sweet orange 59 59
No Yes Thellungiella halophila v173   26 26
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 31 31
No Yes Capsella rubella v183   21 21
No Yes Arabidopsis lyrata Lyrate rockcress 25 25
No Yes Arabidopsis thaliana 10 Thale cress 28 28
No Yes Carica papaya Papaya 14 14
No Yes Medicago truncatula Barrel medic 44 44
No Yes Phaseolus vulgaris v186 French bean 24 24
No Yes Glycine max v109 Soybean 42 42
No Yes Cucumis sativus v122 Cucumber 33 33
No Yes Fragaria vesca Wild strawberry 18 18
No Yes Malus domestica v196 Apple 35 35
No Yes Prunus persica v139 Peach 18 18
No Yes Linum usitatissimum v200 Flax 33 33
No Yes Manihot esculenta v147 Cassava 29 29
No Yes Populus trichocarpa v156 Black cottonwood 33 33
No Yes Vitis vinifera Wine grape 17 17
No Yes Mimulus guttatus v140 Spotted monkey flower 21 21
No Yes Solanum lycopersicum v.2.3 Tomato 20 20
No Yes Solanum tuberosum Potato 22 22
No Yes Actinidia chinensis Hongyang   17 17
No Yes Aquilegia coerulea v195   39 39
No Yes Triticum urartu 22   14 14
No Yes Triticum aestivum 22 Bread wheat 45 45
No Yes Aegilops tauschii 22   15 15
No Yes Brachypodium distachyon Stiff brome 27 27
No Yes Oryza barthii 22 African wild rice 24 24
No Yes Oryza meridionalis 22   22 22
No Yes Oryza glumaepatula 22   27 27
No Yes Oryza glaberrima African rice 18 18
No Yes Oryza punctata 22   24 24
No Yes Oryza nivara 22   35 35
No Yes Oryza brachyantha 22 Malo sina 18 18
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 28 28
No Yes Oryza sativa v193 Rice 28 28
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 24 24
No Yes Panicum virgatum v202 Switchgrass 46 46
No Yes Setaria italica v164 Foxtail millet 25 25
No Yes Zea mays subsp. mays Maize 25 25
No Yes Zea mays v181 Maize 29 29
No Yes Sorghum bicolor Sorghum 19 19
No Yes Musa balbisiana Balbis banana 20 20
No Yes Musa acuminata 22 Wild Malaysian banana 21 21
No Yes Amborella trichopoda 22   15 15
No Yes Physcomitrella patens   18 18
No Yes Coccomyxa subellipsoidea sp. C-169 v2   14 14
No Yes Asterochloris sp. Cgr/DA1pho v1.0   8 8
No Yes Chlorella variabilis sp. NC64A   15 15
No Yes Chlorella vulgaris   10 10
No Yes Volvox carteri f. nagariensis   13 13
No Yes Volvox carteri v199   17 17
No Yes Chlamydomonas reinhardtii 4.0   15 15
No Yes Ostreococcus sp. RCC809   11 11
No Yes Ostreococcus lucimarinus CCE9901   11 11
No Yes Ostreococcus tauri   10 9
No Yes Bathycoccus prasinos   11 11
No Yes Micromonas sp. RCC299   14 13
No Yes Micromonas pusilla CCMP1545 v3.0   18 17
No Yes Cyanidioschyzon merolae strain 10D 22   3 3
No Yes Cyanidioschyzon merolae   3 3
No Yes Porphyridium purpureum 02_2012   3 3
No Yes Thecamonas trahens ATCC 50062   41 39
No Yes Bigelowiella natans CCMP2755 22   55 50
No Yes Giardia lamblia 2.3   3 3
No Yes Cyanophora paradoxa   16 16
No Yes Leishmania mexicana 2.4   13 13
No Yes Leishmania major strain Friedlin   12 12
No Yes Leishmania infantum JPCM5 2.4   11 11
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   12 12
No Yes Trypanosoma vivax   14 14
No Yes Trypanosoma cruzi strain CL Brener   12 12
No Yes Trypanosoma congolense 2.4   13 13
No Yes Trypanosoma brucei gambiense v4.1   13 13
No Yes Trypanosoma brucei TREU927 v4.1   12 12
No Yes Ectocarpus siliculosus   24 21
No Yes Aureococcus anophagefferens   14 14
No Yes Albugo laibachii 22   31 26
No Yes Pythium iwayamai DAOM BR242034 22   23 20
No Yes Pythium arrhenomanes ATCC 12531 22   21 17
No Yes Pythium ultimum v1.7-2   26 22
No Yes Pythium aphanidermatum DAOM BR444 22   21 20
No Yes Pythium irregulare DAOM BR486 22   28 24
No Yes Pythium vexans DAOM BR484 22   25 21
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 24 21
No Yes Phytophthora sojae 1.1   23 21
No Yes Phytophthora infestans T30-4   25 21
No Yes Phytophthora capsici   20 19
No Yes Hyaloperonospora arabidopsidis 22   16 15
No Yes Phaeodactylum tricornutumCCAP 1055/1   8 8
No Yes Fragilariopsis cylindrus   16 16
No Yes Thalassiosira pseudonana CCMP1335   7 7
No Yes Perkinsus marinus ATCC 50983   32 30
No Yes Paramecium tetraurelia   131 102
No Yes Tetrahymena thermophila SB210 1   56 44
No Yes Ichthyophthirius multifiliis strain G5   29 23
No Yes Cryptosporidium hominis   7 6
No Yes Cryptosporidium muris   8 7
No Yes Cryptosporidium parvum Iowa II   8 7
No Yes Neospora caninum   14 13
No Yes Toxoplasma gondii VEG   11 10
No Yes Toxoplasma gondii ME49   12 11
No Yes Toxoplasma gondii GT1   9 8
No Yes Babesia bovis T2Bo   14 12
No Yes Theileria parva   7 6
No Yes Theileria annulata   7 6
No Yes Plasmodium falciparum 3D7   6 5
No Yes Plasmodium vivax SaI-1 7.0   6 5
No Yes Plasmodium knowlesi strain H   6 5
No Yes Plasmodium yoelii ssp. yoelii 1   6 5
No Yes Plasmodium chabaudi   6 5
No Yes Plasmodium berghei ANKA   6 5
No Yes Symbiodinium minutum clade B1 v1.2   117 104
No Yes Naegleria gruberi   12 12
No Yes Trichomonas vaginalis   15 15
No Yes Guillardia theta CCMP2712 v1.0   44 42
No Yes Emiliania huxleyi CCMP1516   102 100
No Yes Thermobaculum terrenum ATCC BAA-798   2 2
No Yes Leptolyngbya sp. PCC 7376   13 12
No Yes Pseudanabaena sp. PCC 7367   15 14
No Yes Acaryochloris marina MBIC11017   39 34
No Yes Synechocystis sp. PCC 6803   11 10
No Yes Thermosynechococcus sp. NK55   20 16
No Yes Thermosynechococcus elongatus BP-1   22 18
No Yes Synechococcus sp. PCC 7502   7 7
No Yes Synechococcus sp. PCC 6312   19 16
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   2 2
No Yes Microcoleus sp. PCC 7113   23 22
No Yes Trichodesmium erythraeum IMS101   14 13
No Yes Geitlerinema sp. PCC 7407   13 13
No Yes Cyanothece sp. PCC 8802   13 12
No Yes Gloeocapsa sp. PCC 7428   6 6
No Yes Halothece sp. PCC 7418   7 7
No Yes Microcystis aeruginosa NIES-843   9 8
No Yes Gloeobacter violaceus PCC 7421   6 6
No Yes Rivularia sp. PCC 7116   16 15
No Yes Calothrix sp. PCC 7507   13 13
No Yes Anabaena variabilis ATCC 29413   13 13
No Yes 'Nostoc azollae' 0708   6 6
No Yes Nostoc sp. PCC 7107   12 12
No Yes Nostoc punctiforme PCC 73102   13 13
No Yes Nostoc sp. PCC 7120   13 13
No Yes Nostoc sp. PCC 7524   14 14
No Yes Anabaena sp. 90   9 9
No Yes Conexibacter woesei DSM 14684   5 5
No Yes Cryptobacterium curtum DSM 15641   3 3
No Yes Eggerthella sp. YY7918   3 3
No Yes Eggerthella lenta DSM 2243   3 3
No Yes Slackia heliotrinireducens DSM 20476   7 7
No Yes Olsenella uli DSM 7084   6 6
No Yes Atopobium parvulum DSM 20469   3 3
No Yes Coriobacterium glomerans PW2   3 3
No Yes Rubrobacter xylanophilus DSM 9941   3 3
No Yes Ilumatobacter coccineus   7 7
No Yes Acidimicrobium ferrooxidans DSM 10331   3 3
No Yes Thermobispora bispora DSM 43833   6 6
No Yes Nakamurella multipartita DSM 44233   8 8
No Yes Acidothermus cellulolyticus 11B   4 4
No Yes Modestobacter marinus   5 5
No Yes Blastococcus saxobsidens DD2   5 5
No Yes Geodermatophilus obscurus DSM 43160   5 5
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   13 11
No Yes Stackebrandtia nassauensis DSM 44728   6 6
No Yes Frankia symbiont of Datisca glomerata   10 8
No Yes Frankia sp. EAN1pec   20 16
No Yes Frankia alni ACN14a   15 12
No Yes Thermobifida fusca YX   4 4
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   5 5
No Yes Thermomonospora curvata DSM 43183   7 7
No Yes Streptosporangium roseum DSM 43021   7 7
No Yes Kitasatospora setae KM-6054   11 9
No Yes Streptomyces coelicolor A3(2)   10 9
No Yes Streptomyces sp. PAMC26508   9 8
No Yes Streptomyces flavogriseus ATCC 33331   9 8
No Yes Streptomyces sp. SirexAA-E   8 7
No Yes Streptomyces griseus subsp. griseus NBRC 13350   8 7
No Yes Streptomyces bingchenggensis BCW-1   14 12
No Yes Streptomyces violaceusniger Tu 4113   11 9
No Yes Streptomyces avermitilis MA-4680   12 10
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   10 9
No Yes Streptomyces scabiei 87.22   13 11
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   11 10
No Yes Actinosynnema mirum DSM 43827   4 4
No Yes Saccharomonospora viridis DSM 43017   3 3
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   4 4
No Yes Amycolatopsis mediterranei U32   4 4
No Yes Kribbella flavida DSM 17836   5 5
No Yes Nocardioides sp. JS614   5 5
No Yes Propionibacterium propionicum F0230a   6 6
No Yes Propionibacterium acnes SK137   4 4
No Yes Microlunatus phosphovorus NM-1   9 8
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   4 4
No Yes Salinispora arenicola CNS-205   4 4
No Yes Salinispora tropica CNB-440   4 4
No Yes Verrucosispora maris AB-18-032   5 5
No Yes Micromonospora sp. L5   5 5
No Yes Micromonospora aurantiaca ATCC 27029   5 5
No Yes Actinoplanes sp. N902-109   5 5
No Yes Actinoplanes sp. SE50/110   5 5
No Yes Actinoplanes missouriensis 431   6 6
No Yes Segniliparus rotundus DSM 44985   3 3
No Yes Tsukamurella paurometabola DSM 20162   8 7
No Yes Gordonia sp. KTR9   6 5
No Yes Gordonia polyisoprenivorans VH2   6 5
No Yes Gordonia bronchialis DSM 43247   6 5
No Yes Rhodococcus jostii RHA1   14 12
No Yes Rhodococcus equi 103S   6 5
No Yes Rhodococcus opacus B4   8 7
No Yes Rhodococcus erythropolis PR4   3 3
No Yes Nocardia cyriacigeorgica GUH-2   9 8
No Yes Nocardia farcinica IFM 10152   9 8
No Yes Amycolicicoccus subflavus DQS3-9A1   4 4
No Yes Mycobacterium massiliense str. GO 06   3 2
No Yes Mycobacterium abscessus ATCC 19977   5 4
No Yes Mycobacterium sp. JLS   8 7
No Yes Mycobacterium intracellulare ATCC 13950   14 9
No Yes Mycobacterium avium 104   13 9
No Yes Mycobacterium vanbaalenii PYR-1   6 5
No Yes Mycobacterium canettii CIPT 140010059   11 9
No Yes Mycobacterium africanum GM041182   11 9
No Yes Mycobacterium tuberculosis KZN 1435   8 7
No Yes Mycobacterium tuberculosis   9 8
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   9 8
No Yes Mycobacterium rhodesiae NBB3   17 14
No Yes Mycobacterium ulcerans Agy99   10 8
No Yes Mycobacterium gilvum PYR-GCK   5 4
No Yes Mycobacterium chubuense NBB4   8 7
No Yes Mycobacterium marinum M   15 11
No Yes Mycobacterium smegmatis str. MC2 155   5 4
No Yes Mycobacterium leprae Br4923   3 3
No Yes Corynebacterium resistens DSM 45100   3 3
No Yes Corynebacterium aurimucosum ATCC 700975   3 3
No Yes Corynebacterium kroppenstedtii DSM 44385   3 3
No Yes Corynebacterium efficiens YS-314   4 4
No Yes Corynebacterium ulcerans 0102   3 3
No Yes Corynebacterium urealyticum DSM 7109   3 3
No Yes Corynebacterium jeikeium K411   3 3
No Yes Corynebacterium variabile DSM 44702   3 3
No Yes Corynebacterium pseudotuberculosis 316   3 3
No Yes Corynebacterium glutamicum R   3 3
No Yes Corynebacterium diphtheriae NCTC 13129   3 3
No Yes Tropheryma whipplei TW08/27   3 3
No Yes Sanguibacter keddieii DSM 10542   7 7
No Yes Kytococcus sedentarius DSM 20547   3 3
No Yes Beutenbergia cavernae DSM 12333   7 7
No Yes Leifsonia xyli subsp. xyli str. CTCB07   8 8
No Yes Microbacterium testaceum StLB037   7 7
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   4 4
No Yes Jonesia denitrificans DSM 20603   6 6
No Yes Intrasporangium calvum DSM 43043   5 5
No Yes Brachybacterium faecium DSM 4810   6 6
No Yes Isoptericola variabilis 225   6 6
No Yes Xylanimonas cellulosilytica DSM 15894   7 7
No Yes Cellulomonas flavigena DSM 20109   9 9
No Yes Cellulomonas fimi ATCC 484   7 7
No Yes [Cellvibrio] gilvus ATCC 13127   8 8
No Yes Arthrobacter phenanthrenivorans Sphe3   8 8
No Yes Arthrobacter chlorophenolicus A6   8 8
No Yes Arthrobacter aurescens TC1   8 8
No Yes Arthrobacter arilaitensis Re117   6 6
No Yes Kocuria rhizophila DC2201   3 3
No Yes Rothia mucilaginosa DY-18   3 3
No Yes Rothia dentocariosa ATCC 17931   3 3
No Yes Arthrobacter sp. Rue61a   7 7
No Yes Arthrobacter sp. FB24   10 10
No Yes Renibacterium salmoninarum ATCC 33209   3 3
No Yes Micrococcus luteus NCTC 2665   3 3
No Yes Gardnerella vaginalis 409-05   4 4
No Yes Bifidobacterium longum subsp. longum JDM301   8 7
No Yes Bifidobacterium animalis subsp. lactis Bl-04   5 5
No Yes Bifidobacterium dentium Bd1   6 6
No Yes Bifidobacterium breve ACS-071-V-Sch8b   4 4
No Yes Bifidobacterium bifidum S17   5 5
No Yes Bifidobacterium adolescentis ATCC 15703   5 5
No Yes Arcanobacterium haemolyticum DSM 20595   3 3
No Yes Mobiluncus curtisii ATCC 43063   4 4
No Yes Actinomyces sp. F0330   11 10
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   3 3
No Yes Anaerolinea thermophila UNI-1   7 7
No Yes Thermomicrobium roseum DSM 5159   3 3
No Yes Sphaerobacter thermophilus DSM 20745   3 3
No Yes Herpetosiphon aurantiacus DSM 785   14 13
No Yes Roseiflexus sp. RS-1   29 28
No Yes Roseiflexus castenholzii DSM 13941   25 24
No Yes Chloroflexus sp. MS-G   12 11
No Yes Chloroflexus sp. Y-400-fl   13 12
No Yes Chloroflexus aggregans DSM 9485   13 12
No Yes Chloroflexus aurantiacus J-10-fl   13 12
No Yes Deinococcus gobiensis I-0   2 2
No Yes Deinococcus deserti VCD115   2 2
No Yes Deinococcus maricopensis DSM 21211   2 2
No Yes Deinococcus radiodurans R1   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Finegoldia magna ATCC 29328   1 1
No Yes Megamonas hypermegale   1 1
No Yes Selenomonas sputigena ATCC 35185   2 2
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   4 4
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   1 1
No Yes Clostridium clariflavum DSM 19732   3 3
No Yes Clostridium cellulolyticum H10   2 2
No Yes Clostridium thermocellum ATCC 27405   4 3
No Yes Oscillibacter valericigenes Sjm18-20   3 3
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes Thermincola potens JR   4 4
No Yes Pelotomaculum thermopropionicum SI   2 2
No Yes Desulfosporosinus acidiphilus SJ4   2 2
No Yes Desulfosporosinus orientis DSM 765   2 2
No Yes Dehalobacter sp. DCA   2 2
No Yes Dehalobacter sp. CF   2 2
No Yes Syntrophobotulus glycolicus DSM 8271   2 2
No Yes Desulfitobacterium hafniense Y51   2 2
No Yes Desulfitobacterium dehalogenans ATCC 51507   2 2
No Yes Desulfotomaculum reducens MI-1   2 2
No Yes Desulfotomaculum acetoxidans DSM 771   2 2
No Yes Desulfotomaculum kuznetsovii DSM 6115   2 2
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   2 2
No Yes Desulfotomaculum ruminis DSM 2154   2 2
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   2 2
No Yes Eubacterium rectale ATCC 33656   4 4
No Yes Coprococcus sp. ART55/1   5 5
No Yes Roseburia hominis A2-183   1 1
No Yes Roseburia intestinalis   1 1
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Butyrivibrio fibrisolvens   3 3
No Yes Syntrophothermus lipocalidus DSM 12680   2 2
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium novyi NT   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Clostridium beijerinckii NCIMB 8052   3 3
No Yes Clostridium tetani E88   1 1
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Clostridium acetobutylicum ATCC 824   5 5
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor bescii DSM 6725   1 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Thermoanaerobacter tengcongensis MB4   1 1
No Yes Moorella thermoacetica ATCC 39073   2 2
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Brevibacillus brevis NBRC 100599   4 4
No Yes Paenibacillus sp. JDR-2   2 2
No Yes Paenibacillus terrae HPL-003   4 4
No Yes Paenibacillus mucilaginosus 3016   2 2
No Yes Paenibacillus polymyxa M1   3 3
No Yes Lysinibacillus sphaericus C3-41   2 2
No Yes Bacillus sp. 1NLA3E   2 2
No Yes Bacillus halodurans C-125   2 2
No Yes Bacillus clausii KSM-K16   2 2
No Yes Bacillus cellulosilyticus DSM 2522   2 2
No Yes Bacillus megaterium DSM 319   1 1
No Yes Staphylococcus lugdunensis HKU09-01   2 1
No Yes Staphylococcus aureus subsp. aureus JH1   2 1
No Yes Staphylococcus aureus   2 1
No Yes Gemmatimonas aurantiaca T-27   2 2
No Yes Pelodictyon phaeoclathratiforme BU-1   3 2
No Yes Niastella koreensis GR20-10   2 2
No Yes Fibrella aestuarina   5 5
No Yes Spirosoma linguale DSM 74   4 4
No Yes Runella slithyformis DSM 19594   2 2
No Yes Parabacteroides distasonis ATCC 8503   3 3
No Yes Tannerella forsythia ATCC 43037   2 2
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella intermedia 17   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Prevotella ruminicola 23   2 2
No Yes Porphyromonas asaccharolytica DSM 20707   1 1
No Yes Porphyromonas gingivalis ATCC 33277   1 1
No Yes Bacteroides salanitronis DSM 18170   5 4
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   6 5
No Yes Bacteroides fragilis YCH46   1 1
No Yes Pedobacter heparinus DSM 2366   1 1
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   2 2
No Yes Waddlia chondrophila WSU 86-1044   3 2
No Yes Candidatus Protochlamydia amoebophila UWE25   3 2
No Yes Parachlamydia acanthamoebae UV-7   3 2
No Yes Simkania negevensis Z   2 1
No Yes Chlamydophila pecorum E58   2 1
No Yes Chlamydia muridarum Nigg   2 1
No Yes Chlamydophila pneumoniae TW-183   2 1
No Yes Chlamydophila caviae GPIC   2 1
No Yes Chlamydophila felis Fe/C-56   2 1
No Yes Chlamydophila abortus S26/3   2 1
No Yes Chlamydia psittaci 01DC11   2 1
No Yes Chlamydia trachomatis B/Jali20/OT   2 1
No Yes Phycisphaera mikurensis NBRC 102666   5 5
No Yes Isosphaera pallida ATCC 43644   21 21
No Yes Planctomyces brasiliensis DSM 5305   19 19
No Yes Planctomyces limnophilus DSM 3776   18 18
No Yes Rhodopirellula baltica SH 1   12 12
No Yes Pirellula staleyi DSM 6068   18 18
No Yes Coraliomargarita akajimensis DSM 45221   2 2
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Treponema brennaborense DSM 12168   1 1
No Yes Treponema succinifaciens DSM 2489   2 2
No Yes Spirochaeta africana DSM 8902   2 2
No Yes Spirochaeta thermophila DSM 6192   3 3
No Yes Dictyoglomus turgidum DSM 6724   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   23 19
No Yes Candidatus Solibacter usitatus Ellin6076   10 9
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   4 4
No Yes Candidatus Koribacter versatilis Ellin345   3 2
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Candidatus Nitrospira defluvii   5 4
No Yes Streptobacillus moniliformis DSM 12112   2 2
No Yes Sebaldella termitidis ATCC 33386   2 2
No Yes Leptotrichia buccalis C-1013-b   5 5
No Yes Candidatus Saccharimonas aalborgensis   1 1
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Acidithiobacillus caldus SM-1   1 1
No Yes Bacteriovorax marinus SJ   11 10
No Yes Bdellovibrio bacteriovorus HD100   9 8
No Yes Arcobacter sp. L   1 1
No Yes Arcobacter nitrofigilis DSM 7299   1 1
No Yes Helicobacter hepaticus ATCC 51449   1 1
No Yes Helicobacter cinaedi PAGU611   1 1
No Yes Nitratiruptor sp. SB155-2   1 1
No Yes Desulfobacca acetoxidans DSM 11109   2 2
No Yes Desulfomonile tiedjei DSM 6799   4 3
No Yes Syntrophobacter fumaroxidans MPOB   4 3
No Yes Desulfotalea psychrophila LSv54   4 2
No Yes Desulfobulbus propionicus DSM 2032   3 2
No Yes Desulfatibacillum alkenivorans AK-01   3 2
No Yes Desulfococcus oleovorans Hxd3   3 3
No Yes Lawsonia intracellularis PHE/MN1-00   1 1
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Haliangium ochraceum DSM 14365   64 60
No Yes Sorangium cellulosum 'So ce 56'   73 66
No Yes Anaeromyxobacter sp. Fw109-5   14 13
No Yes Anaeromyxobacter dehalogenans 2CP-1   17 14
No Yes Stigmatella aurantiaca DW4/3-1   55 49
No Yes Corallococcus coralloides DSM 2259   49 43
No Yes Myxococcus xanthus DK 1622   50 44
No Yes Myxococcus fulvus HW-1   51 45
No Yes Dechloromonas aromatica RCB   6 5
No Yes Thauera sp. MZ1T   4 3
No Yes Azoarcus sp. KH32C   7 5
No Yes Azoarcus sp. BH72   6 5
No Yes Aromatoleum aromaticum EbN1   7 5
No Yes Dechlorosoma suillum PS   4 3
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   8 6
No Yes Methylibium petroleiphilum PM1   4 3
No Yes Thiomonas arsenitoxydans   4 4
No Yes Thiomonas intermedia K12   2 2
No Yes Rubrivivax gelatinosus IL144   3 2
No Yes Leptothrix cholodnii SP-6   4 3
No Yes Burkholderia phytofirmans PsJN   4 3
No Yes Burkholderia phymatum STM815   3 2
No Yes Burkholderia xenovorans LB400   4 3
No Yes Ralstonia eutropha JMP134   3 2
No Yes Cupriavidus taiwanensis LMG 19424   4 3
No Yes Cupriavidus necator N-1   3 2
No Yes Ralstonia eutropha H16   4 3
No Yes Burkholderia sp. RPE64   2 1
No Yes Burkholderia sp. CCGE1002   2 1
No Yes Burkholderia thailandensis E264   2 2
No Yes Burkholderia pseudomallei 1106a   2 2
No Yes Burkholderia mallei SAVP1   2 2
No Yes Burkholderia ambifaria AMMD   2 2
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   3 3
No Yes Verminephrobacter eiseniae EF01-2   3 2
No Yes Alicycliphilus denitrificans K601   3 2
No Yes Ramlibacter tataouinensis TTB310   4 3
No Yes Delftia sp. Cs1-4   4 3
No Yes Delftia acidovorans SPH-1   4 3
No Yes Polaromonas sp. JS666   5 3
No Yes Polaromonas naphthalenivorans CJ2   3 2
No Yes Variovorax paradoxus S110   5 4
No Yes Rhodoferax ferrireducens T118   3 2
No Yes Acidovorax ebreus TPSY   3 2
No Yes Acidovorax sp. KKS102   4 3
No Yes Acidovorax sp. JS42   2 1
No Yes Acidovorax citrulli AAC00-1   5 4
No Yes Acidovorax avenae subsp. avenae ATCC 19860   5 4
No Yes Comamonas testosteroni CNB-2   2 1
No Yes Herminiimonas arsenicoxydans   2 1
No Yes Collimonas fungivorans Ter331   4 3
No Yes Janthinobacterium sp. Marseille   2 1
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Pusillimonas sp. T7-7   2 2
No Yes Advenella kashmirensis WT001   2 2
No Yes Taylorella asinigenitalis MCE3   1 1
No Yes Taylorella equigenitalis MCE9   1 1
No Yes Bordetella petrii DSM 12804   2 2
No Yes Bordetella avium 197N   1 1
No Yes Bordetella parapertussis 12822   2 2
No Yes Bordetella bronchiseptica RB50   2 2
No Yes Achromobacter xylosoxidans A8   2 2
No Yes Achromobacter xylosoxidans   1 1
No Yes Nitrosomonas sp. Is79A3   1 1
No Yes Sideroxydans lithotrophicus ES-1   3 2
No Yes Gallionella capsiferriformans ES-2   4 3
No Yes Methylotenera versatilis 301   3 2
No Yes Methylotenera mobilis JLW8   3 2
No Yes Methylovorus sp. MP688   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Methylobacillus flagellatus KT   2 1
No Yes Magnetococcus marinus MC-1   2 2
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Novosphingobium sp. PP1Y   2 2
No Yes Novosphingobium aromaticivorans DSM 12444   1 1
No Yes Sphingobium japonicum UT26S   1 1
No Yes Sphingobium chlorophenolicum L-1   1 1
No Yes Sphingomonas sp. MM-1   1 1
No Yes Sphingomonas wittichii RW1   1 1
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Pseudovibrio sp. FO-BEG1   3 3
No Yes Jannaschia sp. CCS1   3 3
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   4 4
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Azospirillum lipoferum 4B   8 8
No Yes Azospirillum sp. B510   4 4
No Yes Azospirillum brasilense Sp245   2 2
No Yes Acidiphilium multivorum AIU301   2 2
No Yes Acidiphilium cryptum JF-5   2 2
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Azorhizobium caulinodans ORS 571   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium nodulans ORS 2060   2 2
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Rhizobium etli CIAT 652   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   3 3
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   2 2
No Yes Mesorhizobium loti MAFF303099   2 2
No Yes Methylocella silvestris BL2   2 2
No Yes Hyphomicrobium sp. MC1   3 3
No Yes Hyphomicrobium denitrificans ATCC 51888   2 2
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Methylocystis sp. SC2   1 1
No Yes Saccharophagus degradans 2-40   10 8
No Yes Teredinibacter turnerae T7901   6 4
No Yes Cellvibrio japonicus Ueda107   7 5
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   2 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   2 2
No Yes Vibrio fischeri MJ11   2 2
No Yes Vibrio sp. Ex25   3 3
No Yes Vibrio harveyi ATCC BAA-1116   2 2
No Yes Vibrio parahaemolyticus RIMD 2210633   2 2
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio anguillarum 775   2 2
No Yes Vibrio furnissii NCTC 11218   2 2
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Psychromonas sp. CNPT3   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella woodyi ATCC 51908   3 3
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Colwellia psychrerythraea 34H   2 2
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Glaciecola nitratireducens FR1064   2 2
No Yes Marinobacter adhaerens HP15   2 2
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   6 5
No Yes Kangiella koreensis DSM 16069   3 3
No Yes Hahella chejuensis KCTC 2396   7 6
No Yes Marinomonas posidonica IVIA-Po-181   2 2
No Yes Marinomonas sp. MWYL1   1 1
No Yes Marinomonas mediterranea MMB-1   3 3
No Yes Halomonas elongata DSM 2581   1 1
No Yes Methylomicrobium alcaliphilum   9 7
No Yes Methylomonas methanica MC09   12 9
No Yes Dichelobacter nodosus VCS1703A   1 1
No Yes Rhodanobacter denitrificans   3 3
No Yes Frateuria aurantia DSM 6220   2 2
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   2 2
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xylella fastidiosa M23   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   2 2
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   2 2
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Halothiobacillus neapolitanus c2   2 2
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   6 5
No Yes Thioalkalivibrio sp. K90mix   1 1
No Yes Thiocystis violascens DSM 198   8 7
No Yes Nitrosococcus halophilus Nc4   7 5
No Yes gamma proteobacterium HdN1   7 5
No Yes Photorhabdus asymbiotica   2 2
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Proteus mirabilis HI4320   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   2 2
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya zeae Ech1591   2 2
No Yes Pectobacterium wasabiae WPP163   2 2
No Yes Pectobacterium sp. SCC3193   2 2
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 2
No Yes Pantoea sp. At-9b   2 2
No Yes Pantoea vagans C9-1   2 2
No Yes Pantoea ananatis LMG 20103   2 2
No Yes Erwinia tasmaniensis Et1/99   2 2
No Yes Erwinia sp. Ejp617   3 3
No Yes Erwinia billingiae Eb661   2 2
No Yes Erwinia pyrifoliae Ep1/96   3 3
No Yes Erwinia amylovora ATCC 49946   3 3
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Enterobacter sp. R4-368   2 2
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. TKP   3 3
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   2 2
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   2 2
No Yes Pseudomonas stutzeri A1501   2 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas mendocina ymp   5 4
No Yes Pseudomonas aeruginosa UCBPP-PA14   2 2
No Yes Pseudomonas sp. VLB120   1 1
No Yes Psychrobacter sp. G   1 1
No Yes Psychrobacter sp. PRwf-1   1 1
No Yes Psychrobacter arcticus 273-4   1 1
No Yes Psychrobacter cryohalolentis K5   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Acinetobacter calcoaceticus PHEA-2   1 1
No Yes Acinetobacter baumannii ATCC 17978   1 1
No Yes Acinetobacter sp. ADP1   1 1
No Yes Cycloclasticus sp. P1   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Pyrolobus fumarii 1A   3 3
No Yes Thermogladius cellulolyticus 1633   1 1
No Yes Ignisphaera aggregans DSM 17230   2 2
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Staphylothermus marinus F1   1 1
No Yes Metallosphaera cuprina Ar-4   1 1
No Yes Metallosphaera sedula DSM 5348   1 1
No Yes Acidianus hospitalis W1   1 1
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Pyrobaculum sp. 1860   2 2
No Yes Pyrobaculum calidifontis JCM 11548   2 2
No Yes Pyrobaculum arsenaticum DSM 13514   2 2
No Yes Pyrobaculum oguniense TE7   2 2
No Yes Thermoproteus neutrophilus V24Sta   2 2
No Yes Pyrobaculum aerophilum str. IM2   2 2
No Yes Pyrobaculum islandicum DSM 4184   2 2
No Yes Thermoproteus uzoniensis 768-20   5 5
No Yes Thermoproteus tenax Kra 1   1 1
No Yes Methanosphaerula palustris E1-9c   1 1
No Yes Methanoregula boonei 6A8   2 2
No Yes Methanospirillum hungatei JF-1   3 3
No Yes Methanoplanus petrolearius DSM 11571   3 3
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Picrophilus torridus DSM 9790   1 1
No Yes Halomicrobium mukohataei DSM 12286   3 3
No Yes Haloarcula hispanica ATCC 33960   2 2
No Yes Haloarcula marismortui ATCC 43049   2 2
No Yes Methanobrevibacter ruminantium M1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 96 95
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 48 48
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 28 28
No Yes Ascaris suum Victoria/Ghent Pig roundworm 24 23
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 34 34
No Yes Cryptococcus neoformans var. grubii H99   9 9
No Yes Cryptococcus neoformans B-3501A   9 9
No Yes Cryptococcus neoformans JEC21   8 8
No Yes Paracoccidioides brasiliensis Pb01   11 11
No Yes Paracoccidioides brasiliensis Pb03   7 7
No Yes Coccidioides posadasii str. Silveira   12 12
No Yes Coccidioides immitis RMSCC 3703   11 11
No Yes Coccidioides immitis RMSCC 2394   13 13
No Yes Coccidioides immitis H538.4   9 9
No Yes Ajellomyces dermatitidis ER-3   13 13
No Yes Histoplasma capsulatum H143   15 15
No Yes Histoplasma capsulatum H88   16 16
No Yes Histoplasma capsulatum G186AR   17 17
No Yes Aspergillus fumigatus A1163   10 10
No Yes Candida albicans WO-1   10 9
No Yes Saccharomyces cerevisiae UC5   14 13
No Yes Saccharomyces cerevisiae PW5   15 14
No Yes Saccharomyces cerevisiae FL100   7 7
No Yes Saccharomyces cerevisiae CLIB324   6 6
No Yes Saccharomyces cerevisiae CBS7960   10 10
No Yes Saccharomyces cerevisiae YJM269   13 12
No Yes Saccharomyces cerevisiae T7   16 15
No Yes Saccharomyces cerevisiae FostersB   10 10
No Yes Saccharomyces cerevisiae FostersO   13 12
No Yes Saccharomyces cerevisiae VL3   12 11
No Yes Saccharomyces cerevisiae Vin13   15 14
No Yes Saccharomyces cerevisiae LalvinQA23   12 11
No Yes Saccharomyces cerevisiae AWRI796   10 9
No Yes Saccharomyces cerevisiae Sigma1278b   16 15
No Yes Saccharomyces cerevisiae W303   15 14
No Yes Saccharomyces cerevisiae JAY291   15 14
No Yes Saccharomyces cerevisiae AWRI1631   10 10
No Yes Saccharomyces cerevisiae YPS163   4 4
No Yes Saccharomyces cerevisiae M22   6 6
No Yes Saccharomyces cerevisiae T73   4 4
No Yes Saccharomyces cerevisiae CLIB215   15 14
No Yes Saccharomyces cerevisiae Y10   5 5
No Yes Saccharomyces cerevisiae YJM789   16 15
No Yes Saccharomyces cerevisiae YJM789   16 15
No Yes Saccharomyces cerevisiae RM11-1a   16 15
No Yes Saccharomyces cerevisiae RM11-1a   15 14
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 16 15
No Yes Schizosaccharomyces pombe 972h-   8 8
No Yes Batrachochytrium dendrobatidis JEL423   12 12
No Yes Batrachochytrium dendrobatidis JAM81   12 12
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 20 20
No Yes Hordeum vulgare 22 Domesticated barley 28 28
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 19 18
No Yes Trypanosoma brucei Lister 427 v4.1   12 12
No Yes Neospora caninum Nc-Liverpool 6.2   14 13
No Yes Plasmodium falciparum HB3   6 5
No Yes Plasmodium falciparum Dd2   5 4
No Yes Chroococcidiopsis thermalis PCC 7203   15 13
No Yes Chamaesiphon minutus PCC 6605   14 11
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   11 10
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   11 10
No Yes Synechocystis sp. PCC 6803 substr. GT-I   11 10
No Yes Synechocystis sp. PCC 6803   11 10
No Yes Cyanobium gracile PCC 6307   5 4
No Yes Dactylococcopsis salina PCC 8305   5 4
No Yes Synechococcus sp. JA-2-3B'a(2-13)   10 10
No Yes Synechococcus sp. JA-3-3Ab   10 10
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   9 9
No Yes Synechococcus elongatus PCC 6301   2 2
No Yes Prochlorococcus marinus str. MIT 9303   2 1
No Yes Crinalium epipsammum PCC 9333   13 13
No Yes Oscillatoria nigro-viridis PCC 7112   13 12
No Yes Oscillatoria acuminata PCC 6304   17 16
No Yes Arthrospira platensis NIES-39   19 15
No Yes Cyanothece sp. PCC 7822   22 20
No Yes Cyanothece sp. PCC 7425   23 20
No Yes Cyanothece sp. PCC 7424   15 14
No Yes Cyanothece sp. ATCC 51142   15 14
No Yes Cyanothece sp. PCC 8801   13 12
No Yes Cyanobacterium aponinum PCC 10605   15 14
No Yes Cyanobacterium stanieri PCC 7202   12 11
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   5 5
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   14 14
No Yes Stanieria cyanosphaera PCC 7437   15 14
No Yes Calothrix parietina Calothrix sp. PCC 6303   16 15
No Yes Cylindrospermum stagnale PCC 7417   13 13
No Yes Anabaena cylindrica PCC 7122   11 11
No Yes Adlercreutzia equolifaciens DSM 19450   4 4
No Yes Frankia sp. EuI1c   13 11
No Yes Frankia sp. CcI3   12 9
No Yes Nocardiopsis alba ATCC BAA-2165   5 5
No Yes Streptomyces albus J1074   8 7
No Yes Streptomyces rapamycinicus NRRL 5491   12 11
No Yes Streptomyces davawensis JCM 4913   11 9
No Yes Streptomyces fulvissimus DSM 40593   12 10
No Yes Streptomyces venezuelae ATCC 10712   11 9
No Yes Streptomyces collinus Tu 365   12 10
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   10 9
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   11 10
No Yes Saccharothrix espanaensis DSM 44229   7 7
No Yes Amycolatopsis mediterranei RB   4 4
No Yes Amycolatopsis mediterranei S699   4 4
No Yes Amycolatopsis mediterranei S699   4 4
No Yes Amycolatopsis orientalis HCCB10007   5 5
No Yes Propionibacterium avidum 44067   4 4
No Yes Propionibacterium acnes ATCC 11828   4 4
No Yes Propionibacterium acnes TypeIA2 P.acn31   4 4
No Yes Propionibacterium acnes TypeIA2 P.acn17   4 4
No Yes Propionibacterium acnes TypeIA2 P.acn33   4 4
No Yes Propionibacterium acnes C1   4 4
No Yes Propionibacterium acnes HL096PA1   4 4
No Yes Propionibacterium acnes 6609   4 4
No Yes Propionibacterium acnes 266   4 4
No Yes Propionibacterium acnes KPA171202   4 4
No Yes Propionibacterium acidipropionici ATCC 4875   6 5
No Yes Actinoplanes friuliensis DSM 7358   5 5
No Yes Rhodococcus pyridinivorans SB3094   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   14 13
No Yes Mycobacterium sp. MOTT36Y   15 10
No Yes Mycobacterium sp. JDM601   6 5
No Yes Mycobacterium abscessus subsp. bolletii 50594   5 4
No Yes Mycobacterium liflandii 128FXT   11 9
No Yes Mycobacterium sp. KMS   7 6
No Yes Mycobacterium sp. MCS   7 6
No Yes Mycobacterium yongonense 05-1390   14 9
No Yes Mycobacterium intracellulare MOTT-64   14 9
No Yes Mycobacterium indicus pranii MTCC 9506   14 9
No Yes Mycobacterium intracellulare MOTT-02   14 9
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   14 10
No Yes Mycobacterium avium subsp. paratuberculosis K-10   13 9
No Yes Mycobacterium canettii CIPT 140070017   10 8
No Yes Mycobacterium canettii CIPT 140060008   11 9
No Yes Mycobacterium canettii CIPT 140070008   11 9
No Yes Mycobacterium canettii CIPT 140070010   11 9
No Yes Mycobacterium tuberculosis EAI5/NITR206   8 7
No Yes Mycobacterium tuberculosis EAI5   8 7
No Yes Mycobacterium tuberculosis CAS/NITR204   6 5
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   8 7
No Yes Mycobacterium tuberculosis UT205   8 7
No Yes Mycobacterium tuberculosis RGTB423   5 5
No Yes Mycobacterium tuberculosis RGTB327   6 5
No Yes Mycobacterium tuberculosis CTRI-2   9 8
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   8 7
No Yes Mycobacterium tuberculosis KZN 605   8 7
No Yes Mycobacterium tuberculosis KZN 4207   8 7
No Yes Mycobacterium tuberculosis CCDC5180   8 7
No Yes Mycobacterium tuberculosis CCDC5079   9 8
No Yes Mycobacterium tuberculosis CCDC5079   9 8
No Yes Mycobacterium tuberculosis H37Ra   8 7
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   6 6
No Yes Mycobacterium tuberculosis str. Haarlem   9 8
No Yes Mycobacterium tuberculosis F11   8 7
No Yes Mycobacterium tuberculosis H37Rv   8 7
No Yes Mycobacterium tuberculosis CDC1551   9 8
No Yes Mycobacterium bovis AF2122/97   9 8
No Yes Mycobacterium bovis BCG str. Korea 1168P   9 8
No Yes Mycobacterium bovis BCG str. Mexico   8 7
No Yes Mycobacterium bovis BCG str. Tokyo 172   9 8
No Yes Mycobacterium gilvum Spyr1   5 4
No Yes Mycobacterium smegmatis str. MC2 155   5 4
No Yes Mycobacterium leprae TN   3 3
No Yes Mycobacterium kansasii ATCC 12478   21 14
No Yes Corynebacterium maris DSM 45190   3 3
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   3 3
No Yes Corynebacterium terpenotabidum Y-11   3 3
No Yes Corynebacterium ulcerans BR-AD22   3 3
No Yes Corynebacterium ulcerans 809   3 3
No Yes Corynebacterium urealyticum DSM 7111   3 3
No Yes Corynebacterium argentoratense DSM 44202   3 3
No Yes Corynebacterium callunae DSM 20147   3 3
No Yes Corynebacterium pseudotuberculosis 258   3 3
No Yes Corynebacterium pseudotuberculosis Cp162   3 3
No Yes Corynebacterium pseudotuberculosis P54B96   3 3
No Yes Corynebacterium pseudotuberculosis 267   3 3
No Yes Corynebacterium pseudotuberculosis 1/06-A   3 3
No Yes Corynebacterium pseudotuberculosis 42/02-A   3 3
No Yes Corynebacterium pseudotuberculosis 3/99-5   3 3
No Yes Corynebacterium pseudotuberculosis 31   3 3
No Yes Corynebacterium pseudotuberculosis CIP 52.97   3 3
No Yes Corynebacterium pseudotuberculosis PAT10   3 3
No Yes Corynebacterium pseudotuberculosis I19   3 3
No Yes Corynebacterium pseudotuberculosis FRC41   3 3
No Yes Corynebacterium pseudotuberculosis C231   3 3
No Yes Corynebacterium pseudotuberculosis 1002   3 3
No Yes Corynebacterium glutamicum MB001   3 3
No Yes Corynebacterium glutamicum SCgG2   3 3
No Yes Corynebacterium glutamicum SCgG1   3 3
No Yes Corynebacterium glutamicum ATCC 13032   3 3
No Yes Corynebacterium glutamicum ATCC 13032   3 3
No Yes Corynebacterium glutamicum ATCC 13032   3 3
No Yes Corynebacterium diphtheriae BH8   3 3
No Yes Corynebacterium diphtheriae INCA 402   3 3
No Yes Corynebacterium diphtheriae VA01   3 3
No Yes Corynebacterium diphtheriae HC04   3 3
No Yes Corynebacterium diphtheriae HC03   3 3
No Yes Corynebacterium diphtheriae HC02   3 3
No Yes Corynebacterium diphtheriae HC01   3 3
No Yes Corynebacterium diphtheriae 241   3 3
No Yes Corynebacterium diphtheriae CDCE 8392   3 3
No Yes Corynebacterium diphtheriae PW8   3 3
No Yes Corynebacterium diphtheriae C7 (beta)   3 3
No Yes Corynebacterium diphtheriae 31A   3 3
No Yes Tropheryma whipplei str. Twist   3 3
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   7 7
No Yes Clavibacter michiganensis subsp. sepedonicus   5 5
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   4 4
No Yes Gardnerella vaginalis HMP9231   4 4
No Yes Gardnerella vaginalis ATCC 14019   4 4
No Yes Bifidobacterium longum NCC2705   4 4
No Yes Bifidobacterium longum DJO10A   5 5
No Yes Bifidobacterium longum subsp. infantis 157F   5 5
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   5 5
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   5 5
No Yes Bifidobacterium longum subsp. longum KACC 91563   5 5
No Yes Bifidobacterium longum subsp. longum BBMN68   5 5
No Yes Bifidobacterium longum subsp. longum F8   4 4
No Yes Bifidobacterium longum subsp. longum JCM 1217   5 5
No Yes Bifidobacterium thermophilum RBL67   4 4
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   5 5
No Yes Bifidobacterium animalis subsp. lactis Bl12   5 5
No Yes Bifidobacterium animalis subsp. lactis B420   5 5
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   5 5
No Yes Bifidobacterium animalis subsp. lactis BLC1   5 5
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   5 5
No Yes Bifidobacterium animalis subsp. lactis Bi-07   5 5
No Yes Bifidobacterium animalis subsp. lactis V9   5 5
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   5 5
No Yes Bifidobacterium animalis subsp. lactis BB-12   5 5
No Yes Bifidobacterium animalis subsp. lactis AD011   5 5
No Yes Bifidobacterium breve UCC2003   4 4
No Yes Bifidobacterium asteroides PRL2011   4 4
No Yes Bifidobacterium bifidum PRL2010   5 5
No Yes Bifidobacterium bifidum BGN4   5 5
No Yes Actinomyces graevenitzii C83   8 8
No Yes Actinomyces odontolyticus ATCC 17982   5 5
No Yes Actinomyces viscosus C505   11 11
No Yes Chthonomonas calidirosea T49   7 4
No Yes Deinococcus peraridilitoris DSM 19664   2 2
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   1 1
No Yes Clostridium thermocellum DSM 1313   4 3
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Faecalibacterium prausnitzii L2-6   4 4
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   2 2
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   2 2
No Yes Desulfitobacterium hafniense DCB-2   2 2
No Yes Desulfotomaculum gibsoniae DSM 7213   2 2
No Yes Coprococcus catus GD/7   2 2
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium saccharobutylicum DSM 13864   3 3
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   4 4
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Clostridium acetobutylicum DSM 1731   5 5
No Yes Clostridium acetobutylicum EA 2018   5 5
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Thermacetogenium phaeum DSM 12270   2 2
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Streptococcus suis ST3   1 1
No Yes Streptococcus suis D12   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus sp. Y412MC10   2 2
No Yes Paenibacillus mucilaginosus KNP414   2 2
No Yes Paenibacillus mucilaginosus K02   2 2
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   3 3
No Yes Paenibacillus polymyxa SC2   3 3
No Yes Paenibacillus polymyxa E681   3 3
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   2 1
No Yes Staphylococcus aureus CA-347   2 1
No Yes Staphylococcus aureus Bmb9393   2 1
No Yes Staphylococcus aureus M1   2 1
No Yes Staphylococcus aureus 08BA02176   2 1
No Yes Staphylococcus aureus ST228/18412   2 1
No Yes Staphylococcus aureus ST228/18341   2 1
No Yes Staphylococcus aureus ST228/16125   2 1
No Yes Staphylococcus aureus ST228/16035   2 1
No Yes Staphylococcus aureus ST228/15532   2 1
No Yes Staphylococcus aureus ST228/10497   2 1
No Yes Staphylococcus aureus ST228/10388   2 1
No Yes Staphylococcus aureus 04-02981   2 1
No Yes Staphylococcus aureus RF122   2 1
No Yes Staphylococcus aureus subsp. aureus Z172   2 1
No Yes Staphylococcus aureus subsp. aureus 6850   2 1
No Yes Staphylococcus aureus subsp. aureus SA957   2 1
No Yes Staphylococcus aureus subsp. aureus CN1   2 1
No Yes Staphylococcus aureus subsp. aureus SA40   2 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   2 1
No Yes Staphylococcus aureus subsp. aureus M013   2 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   2 1
No Yes Staphylococcus aureus subsp. aureus VC40   2 2
No Yes Staphylococcus aureus subsp. aureus T0131   2 1
No Yes Staphylococcus aureus subsp. aureus LGA251   2 1
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   2 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   2 1
No Yes Staphylococcus aureus subsp. aureus ED133   2 1
No Yes Staphylococcus aureus subsp. aureus ED98   2 1
No Yes Staphylococcus aureus subsp. aureus TW20   2 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   2 1
No Yes Staphylococcus aureus subsp. aureus TCH60   2 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   2 1
No Yes Staphylococcus aureus subsp. aureus 71193   2 1
No Yes Staphylococcus aureus subsp. aureus S0385   2 1
No Yes Staphylococcus aureus subsp. aureus str. Newman   2 1
No Yes Staphylococcus aureus subsp. aureus Mu3   2 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   2 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   2 1
No Yes Staphylococcus aureus subsp. aureus JH9   2 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   2 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   2 1
No Yes Staphylococcus aureus subsp. aureus MW2   2 1
No Yes Staphylococcus aureus subsp. aureus N315   2 1
No Yes Staphylococcus aureus subsp. aureus Mu50   2 1
No Yes Staphylococcus aureus subsp. aureus COL   2 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   2 1
No Yes Prevotella sp. oral taxon 299 str. F0039   1 1
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Porphyromonas gingivalis TDC60   1 1
No Yes Porphyromonas gingivalis W83   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   2 2
No Yes Chlamydia pecorum P787   2 1
No Yes Chlamydia pecorum W73   2 1
No Yes Chlamydia pecorum PV3056/3   2 1
No Yes Chlamydophila pneumoniae LPCoLN   2 1
No Yes Chlamydophila pneumoniae J138   2 1
No Yes Chlamydophila pneumoniae CWL029   2 1
No Yes Chlamydophila pneumoniae AR39   2 1
No Yes Chlamydia psittaci 01DC12   2 1
No Yes Chlamydia psittaci WC   2 1
No Yes Chlamydia psittaci M56   2 1
No Yes Chlamydia psittaci WS/RT/E30   2 1
No Yes Chlamydia psittaci VS225   2 1
No Yes Chlamydia psittaci MN   2 1
No Yes Chlamydia psittaci GR9   2 1
No Yes Chlamydia psittaci 84/55   2 1
No Yes Chlamydia psittaci 08DC60   2 1
No Yes Chlamydia psittaci 02DC15   2 1
No Yes Chlamydia psittaci C19/98   2 1
No Yes Chlamydia psittaci NJ1   2 1
No Yes Chlamydia psittaci CP3   2 1
No Yes Chlamydophila psittaci RD1   2 1
No Yes Chlamydia psittaci Mat116   2 1
No Yes Chlamydophila psittaci 6BC   2 1
No Yes Chlamydophila psittaci 6BC   2 1
No Yes Chlamydia trachomatis C/TW-3   2 1
No Yes Chlamydia trachomatis L2/434/Bu(f)   2 1
No Yes Chlamydia trachomatis L2/434/Bu(i)   2 1
No Yes Chlamydia trachomatis IU888   2 1
No Yes Chlamydia trachomatis IU824   2 1
No Yes Chlamydia trachomatis L2b/Canada2   2 1
No Yes Chlamydia trachomatis L2b/Canada1   2 1
No Yes Chlamydia trachomatis L3/404/LN   2 1
No Yes Chlamydia trachomatis L2b/Ams5   2 1
No Yes Chlamydia trachomatis L2b/Ams4   2 1
No Yes Chlamydia trachomatis L2b/Ams3   2 1
No Yes Chlamydia trachomatis L2b/Ams2   2 1
No Yes Chlamydia trachomatis L2b/Ams1   2 1
No Yes Chlamydia trachomatis L2b/795   2 1
No Yes Chlamydia trachomatis L2b/CV204   2 1
No Yes Chlamydia trachomatis L2b/LST   2 1
No Yes Chlamydia trachomatis L2b/UCH-2   2 1
No Yes Chlamydia trachomatis L2b/8200/07   2 1
No Yes Chlamydia trachomatis L2/25667R   2 1
No Yes Chlamydia trachomatis L1/224   2 1
No Yes Chlamydia trachomatis L1/115   2 1
No Yes Chlamydia trachomatis L1/440/LN   2 1
No Yes Chlamydia trachomatis K/SotonK1   2 1
No Yes Chlamydia trachomatis Ia/SotonIa3   2 1
No Yes Chlamydia trachomatis Ia/SotonIa1   2 1
No Yes Chlamydia trachomatis G/SotonG1   2 1
No Yes Chlamydia trachomatis F/SotonF3   2 1
No Yes Chlamydia trachomatis F/SW5   2 1
No Yes Chlamydia trachomatis F/SW4   2 1
No Yes Chlamydia trachomatis E/SotonE8   2 1
No Yes Chlamydia trachomatis E/SotonE4   2 1
No Yes Chlamydia trachomatis E/SW3   2 1
No Yes Chlamydia trachomatis D/SotonD6   2 1
No Yes Chlamydia trachomatis D/SotonD5   2 1
No Yes Chlamydia trachomatis D/SotonD1   2 1
No Yes Chlamydia trachomatis A/5291   2 1
No Yes Chlamydia trachomatis A/363   2 1
No Yes Chlamydia trachomatis RC-J/971   2 1
No Yes Chlamydia trachomatis RC-L2/55   2 1
No Yes Chlamydia trachomatis J/6276tet1   2 1
No Yes Chlamydia trachomatis RC-J/966   2 1
No Yes Chlamydia trachomatis RC-J(s)/122   2 1
No Yes Chlamydia trachomatis RC-F(s)/342   2 1
No Yes Chlamydia trachomatis RC-L2(s)/3   2 1
No Yes Chlamydia trachomatis RC-J/953   2 1
No Yes Chlamydia trachomatis RC-J943   2 1
No Yes Chlamydia trachomatis RC-Fs852   2 1
No Yes Chlamydia trachomatis RC-L2s46   2 1
No Yes Chlamydia trachomatis RC-F69   2 1
No Yes Chlamydia trachomatis L2c   2 1
No Yes Chlamydia trachomatis D-LC   2 1
No Yes Chlamydia trachomatis D-EC   2 1
No Yes Chlamydia trachomatis G/9301   2 1
No Yes Chlamydia trachomatis G/11074   2 1
No Yes Chlamydia trachomatis G/11222   2 1
No Yes Chlamydia trachomatis G/9768   2 1
No Yes Chlamydia trachomatis E/150   2 1
No Yes Chlamydia trachomatis E/11023   2 1
No Yes Chlamydia trachomatis B/TZ1A828/OT   2 1
No Yes Chlamydia trachomatis Sweden2   2 1
No Yes Chlamydia trachomatis E/Bour   2 1
No Yes Chlamydia trachomatis A2497   2 1
No Yes Chlamydia trachomatis A2497   2 1
No Yes Chlamydia trachomatis L2b/UCH-1/proctitis   2 1
No Yes Chlamydia trachomatis 434/Bu   2 1
No Yes Chlamydia trachomatis A/HAR-13   2 1
No Yes Chlamydia trachomatis D/UW-3/CX   2 1
No Yes Singulisphaera acidiphila DSM 18658   28 22
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Spirochaeta thermophila DSM 6578   3 3
No Yes Bdellovibrio exovorus JSS   7 6
No Yes Bdellovibrio bacteriovorus str. Tiberius   9 8
No Yes Campylobacter jejuni RM1221   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   6 5
No Yes Lawsonia intracellularis N343   1 1
No Yes Desulfovibrio vulgaris RCH1   1 1
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   1 1
No Yes Desulfovibrio vulgaris str. Hildenborough   1 1
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   1 1
No Yes Sorangium cellulosum So0157-2   59 56
No Yes Anaeromyxobacter sp. K   17 14
No Yes Anaeromyxobacter dehalogenans 2CP-C   17 14
No Yes Myxococcus stipitatus DSM 14675   56 50
No Yes Burkholderia phenoliruptrix BR3459a   3 2
No Yes Pandoraea pnomenusa 3kgm   2 2
No Yes Burkholderia sp. YI23   4 3
No Yes Burkholderia sp. CCGE1003   4 3
No Yes Burkholderia sp. CCGE1001   3 2
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia thailandensis MSMB121   3 3
No Yes Burkholderia pseudomallei MSHR305   2 2
No Yes Burkholderia pseudomallei NCTC 13179   2 2
No Yes Burkholderia pseudomallei BPC006   2 2
No Yes Burkholderia pseudomallei 1026b   2 2
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   2 2
No Yes Burkholderia pseudomallei 1710b   2 2
No Yes Burkholderia pseudomallei K96243   2 2
No Yes Burkholderia mallei NCTC 10229   2 2
No Yes Burkholderia mallei NCTC 10247   2 2
No Yes Burkholderia mallei ATCC 23344   2 2
No Yes Burkholderia lata   3 3
No Yes Burkholderia ambifaria MC40-6   2 2
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   2 2
No Yes Burkholderia cenocepacia J2315   2 2
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   3 2
No Yes Alicycliphilus denitrificans BC   3 2
No Yes Variovorax paradoxus B4   5 5
No Yes Variovorax paradoxus EPS   7 7
No Yes Taylorella asinigenitalis 14/45   2 2
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Taylorella equigenitalis ATCC 35865   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   2 2
No Yes Bordetella bronchiseptica 253   2 2
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Sulfuricella denitrificans skB26   6 3
No Yes Leisingera methylohalidivorans DSM 14336   1 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   3 3
No Yes Rhodobacter sphaeroides 2.4.1   2 2
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Sinorhizobium fredii USDA 257   2 2
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   3 3
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   2 2
No Yes Hyphomicrobium nitrativorans NL23   5 4
No Yes Hyphomicrobium denitrificans 1NES1   2 2
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   2 2
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   8 6
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio parahaemolyticus BB22OP   3 3
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   2 2
No Yes Vibrio anguillarum Listonella anguillarum M3   2 2
No Yes Vibrio nigripulchritudo VibrioScope   2 2
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Glaciecola psychrophila 170   2 2
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Thalassolituus oleivorans MIL-1   4 4
No Yes Stenotrophomonas maltophilia D457   2 2
No Yes Stenotrophomonas maltophilia JV3   2 2
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   2 2
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   3 3
No Yes Xanthomonas axonopodis pv. citrumelo F1   3 3
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   2 2
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   2 2
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Spiribacter salinus M19-40   1 1
No Yes Thioflavicoccus mobilis 8321   2 1
No Yes Proteus mirabilis BB2000   1 1
No Yes Yersinia pseudotuberculosis PB1/+   2 2
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   2 2
No Yes Yersinia pestis biovar Microtus str. 91001   2 2
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   2 2
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   2 2
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Dickeya dadantii Ech586   2 2
No Yes Dickeya dadantii 3937   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Pantoea ananatis LMG 5342   2 2
No Yes Pantoea ananatis PA13   2 2
No Yes Pantoea ananatis AJ13355   2 2
No Yes Erwinia pyrifoliae DSM 12163   3 3
No Yes Erwinia amylovora CFBP1430   3 3
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   2 2
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri CCUG 29243   3 2
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas stutzeri DSM 4166   3 2
No Yes Pseudomonas stutzeri RCH2   3 2
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   3 2
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas poae RE*1-1-14   3 3
No Yes Pseudomonas fluorescens F113   3 3
No Yes Pseudomonas fluorescens A506   3 3
No Yes Pseudomonas fluorescens R124   2 2
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   2 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   2 2
No Yes Pseudomonas aeruginosa MTB-1   3 3
No Yes Pseudomonas aeruginosa LES431   2 2
No Yes Pseudomonas aeruginosa RP73   2 2
No Yes Pseudomonas aeruginosa B136-33   2 2
No Yes Pseudomonas aeruginosa PA1R   2 2
No Yes Pseudomonas aeruginosa PA1   2 2
No Yes Pseudomonas aeruginosa DK2   2 2
No Yes Pseudomonas aeruginosa NCGM2.S1   2 2
No Yes Pseudomonas aeruginosa M18   2 2
No Yes Pseudomonas aeruginosa LESB58   2 2
No Yes Pseudomonas aeruginosa PA7   2 2
No Yes Pseudomonas aeruginosa PAO1   2 2
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter calcoaceticus ruh2202   1 1
No Yes Acinetobacter baumannii ZW85-1   1 1
No Yes Acinetobacter baumannii TYTH-1   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii BJAB07104   1 1
No Yes Acinetobacter baumannii TCDC-AB0715   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii MDR-TJ   1 1
No Yes Acinetobacter baumannii 1656-2   1 1
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii AB307-0294   1 1
No Yes Acinetobacter baumannii AYE   1 1
No Yes Acinetobacter baumannii SDF   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   1 1
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Acinetobacter baumannii ACICU   1 1
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Acinetobacter junii SH205   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   1 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Sulfolobus acidocaldarius Ron12/I   1 1
No Yes Sulfolobus acidocaldarius N8   1 1
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Halovivax ruber XH-70   3 3
No Yes Natronobacterium gregoryi SP2   3 3
No Yes Haloarcula hispanica N601   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 293 293
No Yes Homo sapiens (NCBI version) Human 105 105
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 52 52
No Yes Heliconius numata (Incomplete)   7 6
No Yes Loa loa v3.3 (Request) Eye worm 22 22
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 21 21
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 20 20
No Yes Moniliophthora perniciosa FA553 (Genome survey)   4 4
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 5 5
No Yes Lotus japonicus (Early assembly)   16 16
No Yes Malus x domestica (Duplicate) Apple 35 35
No Yes Ricinus communis (Early assembly) Castor bean 19 19
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   36 36
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 20 20
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 20 20
No Yes Phoenix dactylifera (Early draft) Date palm 8 8
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   8 7
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   2 2
No Yes Homo sapiens 69_37 Human 65 65
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 48 48
No Yes Gorilla gorilla 69_3.1 Western gorilla 50 50
No Yes Pongo abelii 69_2 Sumatran orangutan 49 49
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 47 47
No Yes Macaca mulatta 69_1 Rhesus monkey 45 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 51 51
No Yes Otolemur garnettii 69_3 Small-eared galago 51 51
No Yes Microcebus murinus 69_1 Gray mouse lemur 40 37
No Yes Rattus norvegicus 69_3.4 Norway rat 47 47
No Yes Mus musculus 69_38 House mouse 53 53
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 40 39
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 44 44
No Yes Cavia porcellus 69_3 Domestic guinea pig 43 43
No Yes Oryctolagus cuniculus 69_2 Rabbit 43 43
No Yes Ochotona princeps 69 American pika 40 40
No Yes Tupaia belangeri 69 Northern tree shrew 32 32
No Yes Sus scrofa 69_10.2 Pig 50 50
No Yes Bos taurus 69_3.1 Cattle 49 49
No Yes Vicugna pacos 69_1 Alpaca 26 26
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 47 47
No Yes Mustela putorius furo 69_1.0 Domestic ferret 51 51
No Yes Ailuropoda melanoleuca 69_1 Giant panda 51 51
No Yes Canis familiaris 69_3.1 Dog 54 54
No Yes Felis catus 69 Domestic cat 36 34
No Yes Equus caballus 69_2 Horse 49 49
No Yes Myotis lucifugus 69_2.0 Little brown bat 44 44
No Yes Pteropus vampyrus 69_1 Large flying fox 49 48
No Yes Sorex araneus 69_1 European shrew 30 27
No Yes Erinaceus europaeus 69 Western European hedgehog 32 31
No Yes Procavia capensis 69_1 Cape rock hyrax 45 43
No Yes Loxodonta africana 69_3 African savanna elephant 47 47
No Yes Echinops telfairi 69 Small Madagascar hedgehog 39 38
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 36 35
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 28 27
No Yes Macropus eugenii 69_1.0 Tammar wallaby 39 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 48 48
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 52 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 41 41
No Yes Petromyzon marinus 69_7.0 Sea lamprey 20 20
No Yes Meleagris gallopavo 69_2 Turkey 39 39
No Yes Gallus gallus 69_2 Chicken 42 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 40 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 39 39
No Yes Anolis carolinensis 69_2.0 Green anole 45 45
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 55 55
No Yes Latimeria chalumnae 69_1 Coelacanth 51 51
No Yes Gadus morhua 69_1 Atlantic cod 59 59
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 62 62
No Yes Takifugu rubripes 69_4 Torafugu 60 60
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 60 60
No Yes Oryzias latipes 69_1 Japanese medaka 55 55
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 63 63
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 66 66
No Yes Danio rerio 69_9 Zebrafish 69 69
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 28 27
No Yes Ciona intestinalis 69 Vase tunicate 29 29
No Yes Drosophila melanogaster 69_5 Fruit fly 27 27
No Yes Caenorhabditis elegans 69_215 Roundworm 23 23
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 16 15
No Yes Arabidopsis thaliana 10 Thale cress 22 22
No Yes 1_050719N (meta-genome)   12 12
No Yes 2_050719S (meta-genome)   14 13
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   22 17
No Yes 3_Below_base_of_euphotic (meta-genome)   7 5
No Yes 4_050719Q (meta-genome)   121 109
No Yes 4_Deep_abyss (meta-genome)   9 7
No Yes 5_050719P (meta-genome)   108 98
No Yes 5_Below_upper_mesopelagic (meta-genome)   4 4
No Yes 6_Upper_euphotic (meta-genome)   2 2
No Yes 7_Oxygen_minimum_layer (meta-genome)   8 8
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   2 2
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   4 4
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   6 6
No Yes Bath Hot Springs, filamentous community (meta-genome)   9 9
No Yes Bath Hot Springs, planktonic community (meta-genome)   13 13
No Yes Combined (meta-genome)   18 18
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   20 20
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   11 11
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   7 7
No Yes Dump bottom (Dump bottom) (meta-genome)   129 129
No Yes Dump top (Dump top) (meta-genome)   93 91
No Yes Endophytic microbiome from Rice (meta-genome)   7 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   4 4
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   49 45
No Yes Fungus garden combined (combined) (meta-genome)   12 12
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   17 17
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   20 20
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   13 12
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   10 10
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   9 9
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   9 8
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   12 12
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   19 16
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   15 15
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   6 6
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   26 21
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   17 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   57 52
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   70 69
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   17 17
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   44 41
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   22 22
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   45 42
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   62 59
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   43 42
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   8 8
No Yes Human Gut Community Subject 7 (meta-genome)   25 25
No Yes Human Gut Community Subject 8 (meta-genome)   25 24
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   20 20
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   57 57
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   52 51
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   4 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   268 246
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   66 62
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   19 16
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   78 72
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   62 60
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   46 39
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   74 74
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   44 44
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   13 13
No Yes Mouse Gut Community ob1 (meta-genome)   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   198301 177134
No Yes Nymph Lake Bulk Water (meta-genome)   1 1
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   89 86
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   14 13
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   6 5
No Yes Protozoadb 2010_08 (Protozoadb)   350 331
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   33 32
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   19 18
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   16 16
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   28 25
No Yes Sludge/US, Jazz Assembly (meta-genome)   10 8
No Yes Sludge/US, Phrap Assembly (meta-genome)   22 20
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   157 147
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   236 234
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   271 268
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   137 137
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   151 149
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   158 157
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   191 190
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   16 16
No Yes STRING v9.0.5 (STRING)   4621 4389
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   17 17
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   113 111
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   43 43
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   79873 75224
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   2 2
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   32 31
No Yes Global Ocean Sampling Expedition (GOS)   786 765
No Yes NCBI plasmid sequences (Plasmids)   80 78
No Yes NCBI viral sequences (Viral)   12 12
No Yes PDB chains (SCOP 1.75) (PDB)   38 37
No Yes Protein Data Bank (all PDB sequenc)   246 245
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   487 487
No Yes TargetDB (Targets)   186 183
No Yes UniProt viral sequences (Viral)   41 41

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