SUPERFAMILY 1.75 HMM library and genome assignments server

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gp9 superfamily domain assignments
in
Clostridium perfringens ATCC 13124

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   2449 2449
No Yes Achromobacter xylosoxidans   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes NCBI 2017_08 genome   359 358
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1 1
No Yes Uniprot 2018_03 genome   623 622
No Yes Global Ocean Sampling Expedition (GOS)   812 812
No Yes NCBI viral sequences (Viral)   129 128
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   154 154
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   303 303
No Yes UniProt viral sequences (Viral)   48 48

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]