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Ricin B-like lectins superfamily domain assignments
in
Monodelphis domestica 69_5

Assignment details

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Monodelphis domestica 69_5 has 27 significant domains in 27 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMODP00000000598   1.6e-40   425-553   Ricin B-like  
ENSMODP00000003367   1.53e-19   157-287   Ricin B-like  
ENSMODP00000004296   9.28e-32   266-405   Ricin B-like  
ENSMODP00000005209   1.03e-42   394-523   Ricin B-like  
ENSMODP00000005385   8.61e-18   796-923   Ricin B-like  
ENSMODP00000005805   7.7e-29   491-621   Ricin B-like  
ENSMODP00000006313   3.76e-26   1-123   Cysteine rich domain  
ENSMODP00000006389   6.75e-25   48-173   Cysteine rich domain  
ENSMODP00000008032   0.000000000371   495-543   Ricin B-like  
ENSMODP00000008459   7.51e-21   461-593   Ricin B-like  
ENSMODP00000010834   5.57e-32   528-666   Ricin B-like  
ENSMODP00000011423   1.4e-33   431-566   Ricin B-like  
ENSMODP00000011947   0.00000207   114-219   Ricin B-like  
ENSMODP00000012378   2.51e-28   439-579   Ricin B-like  
ENSMODP00000012713   8.02e-23   55-188   Cysteine rich domain  
ENSMODP00000012870   7.38e-28   425-559   Ricin B-like  
ENSMODP00000015957   3.78e-32   453-600   Ricin B-like  
ENSMODP00000017790   7.47e-19   1753-1883   Ricin B-like  
ENSMODP00000018233   1.03e-25   159-300   Ricin B-like  
ENSMODP00000019147   1.61e-21   393-530   Ricin B-like  
ENSMODP00000019364   1.1e-27   402-549   Ricin B-like  
ENSMODP00000021223   2.37e-24   956-1086   Ricin B-like  
ENSMODP00000022777   4.46e-19   114-249   Ricin B-like  
ENSMODP00000026096   3.13e-30   2-119   Ricin B-like  
ENSMODP00000029630   2.97e-19   2015-2147   Ricin B-like  
ENSMODP00000033025   7.22e-33   22-153   Cysteine rich domain  
ENSMODP00000034626   5.64e-19   408-544   Ricin B-like  
 
Weak hits:
ENSMODP00000041012   0.0318   1063-1104   Ricin B-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   127537 127537
No Yes Homo sapiens 76_38 Human 66 65
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 26 26
No Yes Gorilla gorilla 76_3.1 Western gorilla 32 32
No Yes Pongo abelii 76_2 Sumatran orangutan 25 25
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 29 29
No Yes Papio anubis 76 Olive baboon 29 28
No Yes Macaca mulatta 76_1 Rhesus monkey 35 35
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 50 50
No Yes Otolemur garnettii 76_3 Small-eared galago 27 27
No Yes Microcebus murinus 76_1 Gray mouse lemur 25 25
No Yes Rattus norvegicus 76_5.0 Norway rat 25 25
No Yes Mus musculus 76_38 House mouse 45 44
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 22 22
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 26 26
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 28 28
No Yes Cavia porcellus 76_3 Domestic guinea pig 24 24
No Yes Oryctolagus cuniculus 76_2 Rabbit 28 27
No Yes Ochotona princeps 76 American pika 22 22
No Yes Tupaia belangeri 76 Northern tree shrew 20 20
No Yes Sus scrofa 76_10.2 Pig 30 30
No Yes Bos taurus 76_3.1 Cattle 27 27
No Yes Ovis aries 76_3.1 Sheep 30 30
No Yes Vicugna pacos 76_1 Alpaca 17 17
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 25 25
No Yes Mustela putorius furo 76_1.0 Domestic ferret 28 27
No Yes Ailuropoda melanoleuca 76_1 Giant panda 32 32
No Yes Canis familiaris 76_3.1 Dog 38 38
No Yes Felis catus 76_6.2 Domestic cat 27 27
No Yes Equus caballus 76_2 Horse 30 30
No Yes Myotis lucifugus 76_2.0 Little brown bat 29 29
No Yes Pteropus vampyrus 76_1 Large flying fox 26 26
No Yes Sorex araneus 76_1 European shrew 16 15
No Yes Erinaceus europaeus 76 Western European hedgehog 20 19
No Yes Procavia capensis 76_1 Cape rock hyrax 20 20
No Yes Loxodonta africana 76_3 African savanna elephant 36 36
No Yes Echinops telfairi 76 Small Madagascar hedgehog 25 25
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 24 24
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 21 19
No Yes Macropus eugenii 76_1.0 Tammar wallaby 23 23
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 29 29
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 27 27
No Yes Ornithorhynchus anatinus 76_5 Platypus 27 27
No Yes Saccoglossus kowalevskii v3.0   24 24
No Yes Petromyzon marinus 76_7.0 Sea lamprey 15 15
No Yes Meleagris gallopavo 76_2 Turkey 25 25
No Yes Gallus gallus 76_4 Chicken 31 31
No Yes Anas platyrhynchos 76_1.0 Mallard 30 30
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 26 26
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 29 29
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 39 39
No Yes Anolis carolinensis 76_2.0 Green anole 30 30
No Yes Xenopus laevis African clawed frog 16 16
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 28 28
No Yes Latimeria chalumnae 76_1 Coelacanth 27 27
No Yes Lepisosteus oculatus 76 Spotted gar 41 41
No Yes Gadus morhua 76_1 Atlantic cod 32 32
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 28 28
No Yes Takifugu rubripes 76_4 Torafugu 78 78
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 38 38
No Yes Oryzias latipes 76_1 Japanese medaka 35 35
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 29 29
No Yes Poecilia formosa 76 Amazon molly 33 33
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 41 41
No Yes Astyanax mexicanus 76 Mexican tetra 29 29
No Yes Danio rerio 76_9 Zebrafish 48 48
No Yes Oikopleura dioica   16 16
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 17 17
No Yes Ciona intestinalis 76 Vase tunicate 17 14
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 17 16
No Yes Adineta vaga   58 57
No Yes Octopus bimaculoides 280   17 17
No Yes Crassostrea gigas 22 Pacific oyster 19 18
No Yes Lottia gigantea Owl limpet 18 17
No Yes Helobdella robusta   36 25
No Yes Capitella sp. I   37 27
No Yes Danaus plexippus OGS1.0 Monarch butterfly 10 9
No Yes Heliconius melpomene Postman butterfly 10 9
No Yes Bombyx mori Domestic silkworm 12 12
No Yes Nasonia vitripennis Jewel wasp 7 7
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 20 20
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 10 9
No Yes Linepithema humile v1.1 Argentine ant 10 10
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 8 8
No Yes Solenopsis invicta v.2.2.3 Red fire ant 6 6
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 9 8
No Yes Atta cephalotes v1.1   10 10
No Yes Camponotus floridanus v3.3 Florida carpenter ant 9 8
No Yes Lucilia cuprina Australian sheep blowfly 13 12
No Yes Drosophila grimshawi 1.3   13 12
No Yes Drosophila willistoni 1.3   11 11
No Yes Drosophila pseudoobscura 2.13   11 11
No Yes Drosophila persimilis 1.3   11 11
No Yes Drosophila suzukii   17 13
No Yes Drosophila yakuba 1.3   17 16
No Yes Drosophila simulans 1.3   14 14
No Yes Drosophila sechellia 1.3   11 11
No Yes Drosophila melanogaster 76_5 Fruit fly 25 25
No Yes Drosophila erecta 1.3   14 14
No Yes Drosophila ananassae 1.3   14 13
No Yes Drosophila virilis 1.2   13 12
No Yes Drosophila mojavensis 1.3   11 11
No Yes Megaselia scalaris 22   4 4
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 20 20
No Yes Culex pipiens quinquefasciatus Southern house mosquito 25 24
No Yes Anopheles darlingi 22 American malaria mosquito 16 13
No Yes Anopheles gambiae 49_3j African malaria mosquito 14 14
No Yes Tribolium castaneum 3.0 Red flour beetle 14 13
No Yes Pediculus humanus corporis (Early assembly) Human body louse 9 8
No Yes Acyrthosiphon pisum Pea aphid 7 7
No Yes Rhodnius prolixus 22   11 10
No Yes Daphnia pulex Common water flea 62 50
No Yes Strigamia maritima 22   9 8
No Yes Sarcoptes scabiei   7 7
No Yes Tetranychus urticae Two-spotted spider mite 10 10
No Yes Ixodes scapularis (Preliminary) Black-legged tick 8 8
No Yes Pristionchus pacificus   8 8
No Yes Meloidogyne incognita Southern root-knot nematode 8 7
No Yes Meloidogyne hapla   5 5
No Yes Onchocerca volvulus 22   10 10
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 12 12
No Yes Caenorhabditis japonica   9 9
No Yes Caenorhabditis brenneri   10 10
No Yes Caenorhabditis remanei   11 10
No Yes Caenorhabditis elegans 76_235 Roundworm 22 22
No Yes Caenorhabditis briggsae 2   11 10
No Yes Trichinella spiralis 22   6 6
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 4 4
No Yes Schistosoma mansoni   4 4
No Yes Mnemiopsis leidyi Sea walnut 37 36
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   20 18
No Yes Nematostella vectensis 1.0 Starlet sea anemone 17 17
No Yes Hydra vulgaris   15 15
No Yes Amphimedon queenslandica   6 6
No Yes Trichoplax adhaerens   10 10
No Yes Proterospongia sp. ATCC 50818   22 19
No Yes Monosiga brevicollis   25 24
No Yes Sphaeroforma arctica JP610   14 11
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Conidiobolus coronatus NRRL28638 v1.0   6 6
No Yes Mortierella verticillata NRRL 6337   24 17
No Yes Phycomyces blakesleeanus   24 14
No Yes Rhizopus oryzae RA 99-880   36 19
No Yes Mucor circinelloides   27 13
No Yes Rhizomucor miehei CAU432   15 9
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   2 2
No Yes Microbotryum violaceum 22   1 1
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   64 53
No Yes Piloderma croceum F 1598 v1.0   25 25
No Yes Serpula lacrymans var. lacrymans S7.9   10 10
No Yes Coniophora puteana   9 9
No Yes Hydnomerulius pinastri v2.0   13 13
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   4 4
No Yes Pisolithus microcarpus 441 v1.0   19 14
No Yes Pisolithus tinctorius Marx 270 v1.0   7 7
No Yes Scleroderma citrinum Foug A v1.0   18 18
No Yes Coprinopsis cinerea okayama7 130 v3   41 29
No Yes Pleurotus ostreatus Oyster mushroom 25 25
No Yes Amanita thiersii Skay4041 v1.0   30 30
No Yes Amanita muscaria Koide v1.0 Fly agaric 10 9
No Yes Galerina marginata v1.0   45 38
No Yes Hebeloma cylindrosporum h7 v2.0   18 17
No Yes Laccaria bicolor S238N-H82   20 20
No Yes Agaricus bisporus var. bisporus   28 27
No Yes Schizophyllum commune   14 13
No Yes Stereum hirsutum FP-91666 SS1 v1.0   17 11
No Yes Heterobasidion annosum   6 6
No Yes Gloeophyllum trabeumv1.0   6 6
No Yes Punctularia strigosozonata v1.0   11 9
No Yes Sebacina vermifera MAFF 305830 v1.0   8 8
No Yes Fomitiporia mediterranea v1.0   12 12
No Yes Tulasnella calospora AL13/4D v1.0   37 31
No Yes Postia placenta   32 31
No Yes Wolfiporia cocos MD-104 SS10 v1.0   12 12
No Yes Fomitopsis pinicolav1.0   12 12
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   12 12
No Yes Phanerochaete chrysosporium RP-78 2.1   9 9
No Yes Dichomitus squalens   15 14
No Yes Trametes versicolor v1.0   11 10
No Yes Tremella mesenterica Witches' butter 26 17
No Yes Daldinia eschscholzii EC12 v1.0   3 2
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Magnaporthe poae ATCC 64411 22   4 3
No Yes Magnaporthe grisea 70-15   4 3
No Yes Podospora anserina   3 2
No Yes Sporotrichum thermophile ATCC 42464   3 2
No Yes Thielavia terrestris NRRL 8126   4 3
No Yes Chaetomium globosum CBS 148.51   3 2
No Yes Neurospora tetrasperma   2 2
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   2 2
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   2 1
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Glomerella graminicola 22   3 2
No Yes Fusarium graminearum   5 5
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   3 3
No Yes Fusarium verticillioides 7600   5 5
No Yes Trichoderma asperellum CBS 433.97 v1.0   7 6
No Yes Trichoderma atroviride   8 7
No Yes Trichoderma citrinoviride v1.0   5 4
No Yes Trichoderma reesei 1.2   6 5
No Yes Trichoderma virens Gv29-8   12 11
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   6 5
No Yes Trichoderma harzianum CBS 226.95 v1.0   11 10
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   3 3
No Yes Sclerotinia sclerotiorum   5 4
No Yes Didymella exigua CBS 183.55 v1.0   2 2
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   3 3
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   2 2
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 2 2
No Yes Alternaria brassicicola   2 2
No Yes Cochliobolus lunatus m118 v2.0   4 4
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   2 2
No Yes Stagonospora nodorum   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Aspergillus zonatus v1.0   4 4
No Yes Penicillium chrysogenum Wisconsin 54-1255   3 3
No Yes Penicillium chrysogenum v1.0   4 4
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus sydowii v1.0   3 3
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   2 2
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   2 2
No Yes Aspergillus oryzae RIB40   5 5
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Catenaria anguillulae PL171 v1.0   27 23
No Yes Allomyces macrogynus ATCC 38327   5 3
No Yes Spizellomyces punctatus DAOM BR117   2 2
No Yes Dictyostelium discoideum   20 12
No Yes Dictyostelium purpureum   3 3
No Yes Entamoeba dispar 1.2   8 8
No Yes Entamoeba invadens 1.2   4 4
No Yes Entamoeba histolytica 1   8 8
No Yes Selaginella moellendorffii   29 22
No Yes Pinus taeda Loblolly pine 32 27
No Yes Picea abies Norway spruce 9 8
No Yes Eucalyptus grandis v201 Rose gum 12 12
No Yes Theobroma cacao B97-61/B2 v1 Cacao 3 3
No Yes Gossypium raimondii v221   15 11
No Yes Citrus clementina v165   5 5
No Yes Citrus sinensis v154 Sweet orange 9 9
No Yes Thellungiella halophila v173   5 5
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 5 5
No Yes Capsella rubella v183   3 3
No Yes Arabidopsis lyrata Lyrate rockcress 5 5
No Yes Arabidopsis thaliana 10 Thale cress 3 3
No Yes Carica papaya Papaya 5 5
No Yes Medicago truncatula Barrel medic 15 15
No Yes Phaseolus vulgaris v186 French bean 9 9
No Yes Glycine max v109 Soybean 18 16
No Yes Cucumis sativus v122 Cucumber 15 13
No Yes Fragaria vesca Wild strawberry 2 2
No Yes Malus domestica v196 Apple 13 10
No Yes Prunus persica v139 Peach 3 3
No Yes Linum usitatissimum v200 Flax 7 7
No Yes Manihot esculenta v147 Cassava 3 3
No Yes Populus trichocarpa v156 Black cottonwood 17 14
No Yes Vitis vinifera Wine grape 8 8
No Yes Mimulus guttatus v140 Spotted monkey flower 6 6
No Yes Solanum lycopersicum v.2.3 Tomato 3 3
No Yes Solanum tuberosum Potato 6 6
No Yes Actinidia chinensis Hongyang   8 8
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   14 10
No Yes Triticum aestivum 22 Bread wheat 43 36
No Yes Aegilops tauschii 22   16 11
No Yes Brachypodium distachyon Stiff brome 23 18
No Yes Oryza barthii 22 African wild rice 30 10
No Yes Oryza meridionalis 22   22 12
No Yes Oryza glumaepatula 22   27 11
No Yes Oryza glaberrima African rice 11 9
No Yes Oryza punctata 22   22 11
No Yes Oryza nivara 22   19 11
No Yes Oryza brachyantha 22 Malo sina 10 7
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 21 15
No Yes Oryza sativa v193 Rice 21 15
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 18 13
No Yes Panicum virgatum v202 Switchgrass 41 32
No Yes Setaria italica v164 Foxtail millet 18 12
No Yes Zea mays subsp. mays Maize 29 23
No Yes Zea mays v181 Maize 26 20
No Yes Sorghum bicolor Sorghum 16 12
No Yes Musa balbisiana Balbis banana 11 9
No Yes Musa acuminata 22 Wild Malaysian banana 10 10
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   6 5
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Volvox carteri f. nagariensis   10 8
No Yes Volvox carteri v199   10 7
No Yes Chlamydomonas reinhardtii 4.0   5 4
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   13 8
No Yes Cyanophora paradoxa   2 2
No Yes Ectocarpus siliculosus   2 1
No Yes Aureococcus anophagefferens   10 8
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   20 9
No Yes Pythium arrhenomanes ATCC 12531 22   17 10
No Yes Pythium ultimum v1.7-2   9 5
No Yes Pythium aphanidermatum DAOM BR444 22   15 10
No Yes Pythium irregulare DAOM BR486 22   6 3
No Yes Pythium vexans DAOM BR484 22   10 7
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 21 11
No Yes Phytophthora sojae 1.1   34 12
No Yes Phytophthora infestans T30-4   17 8
No Yes Phytophthora capsici   14 11
No Yes Hyaloperonospora arabidopsidis 22   3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   10 7
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   5 5
No Yes Perkinsus marinus ATCC 50983   19 14
No Yes Paramecium tetraurelia   6 4
No Yes Tetrahymena thermophila SB210 1   6 5
No Yes Ichthyophthirius multifiliis strain G5   2 2
No Yes Cryptosporidium hominis   5 5
No Yes Cryptosporidium muris   7 7
No Yes Cryptosporidium parvum Iowa II   6 6
No Yes Neospora caninum   4 4
No Yes Toxoplasma gondii VEG   7 7
No Yes Toxoplasma gondii ME49   6 6
No Yes Toxoplasma gondii GT1   6 6
No Yes Babesia bovis T2Bo   4 4
No Yes Theileria parva   2 2
No Yes Theileria annulata   2 2
No Yes Plasmodium falciparum 3D7   2 2
No Yes Plasmodium vivax SaI-1 7.0   3 3
No Yes Plasmodium knowlesi strain H   3 3
No Yes Plasmodium yoelii ssp. yoelii 1   3 3
No Yes Plasmodium chabaudi   2 2
No Yes Plasmodium berghei ANKA   2 2
No Yes Symbiodinium minutum clade B1 v1.2   49 39
No Yes Naegleria gruberi   4 4
No Yes Trichomonas vaginalis   13 13
No Yes Guillardia theta CCMP2712 v1.0   4 4
No Yes Emiliania huxleyi CCMP1516   5 5
No Yes Microcoleus sp. PCC 7113   2 2
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   3 3
No Yes Calothrix sp. PCC 7507   3 3
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   2 2
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Eggerthella sp. YY7918   8 2
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Thermobispora bispora DSM 43833   2 2
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Modestobacter marinus   1 1
No Yes Catenulispora acidiphila DSM 44928   87 79
No Yes Stackebrandtia nassauensis DSM 44728   9 8
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   7 7
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   4 4
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   16 13
No Yes Kitasatospora setae KM-6054   15 15
No Yes Streptomyces coelicolor A3(2)   17 17
No Yes Streptomyces sp. PAMC26508   12 12
No Yes Streptomyces flavogriseus ATCC 33331   11 11
No Yes Streptomyces sp. SirexAA-E   8 7
No Yes Streptomyces griseus subsp. griseus NBRC 13350   14 14
No Yes Streptomyces bingchenggensis BCW-1   24 21
No Yes Streptomyces violaceusniger Tu 4113   7 7
No Yes Streptomyces avermitilis MA-4680   12 12
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   12 11
No Yes Streptomyces scabiei 87.22   43 42
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   28 27
No Yes Actinosynnema mirum DSM 43827   32 31
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   55 54
No Yes Kribbella flavida DSM 17836   12 11
No Yes Salinispora arenicola CNS-205   4 4
No Yes Salinispora tropica CNB-440   3 3
No Yes Verrucosispora maris AB-18-032   28 27
No Yes Micromonospora sp. L5   24 22
No Yes Micromonospora aurantiaca ATCC 27029   23 22
No Yes Actinoplanes sp. N902-109   36 32
No Yes Actinoplanes sp. SE50/110   46 40
No Yes Actinoplanes missouriensis 431   31 28
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Mycobacterium canettii CIPT 140010059   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium marinum M   1 1
No Yes Sanguibacter keddieii DSM 10542   2 2
No Yes Microbacterium testaceum StLB037   7 6
No Yes Jonesia denitrificans DSM 20603   3 3
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Cellulomonas flavigena DSM 20109   7 7
No Yes Cellulomonas fimi ATCC 484   10 10
No Yes [Cellvibrio] gilvus ATCC 13127   4 4
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. Rue61a   1 1
No Yes Renibacterium salmoninarum ATCC 33209   6 6
No Yes Bifidobacterium longum subsp. longum JDM301   1 1
No Yes Bifidobacterium bifidum S17   5 3
No Yes Arcanobacterium haemolyticum DSM 20595   1 1
No Yes Herpetosiphon aurantiacus DSM 785   4 3
No Yes Deinococcus deserti VCD115   1 1
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Clostridium cellulolyticum H10   3 3
No Yes Clostridium thermocellum ATCC 27405   2 2
No Yes Faecalibacterium prausnitzii   2 2
No Yes Ruminococcus bromii   1 1
No Yes Ruminococcus albus 7   13 9
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium phytofermentans ISDg   2 2
No Yes Clostridium lentocellum DSM 5427   6 6
No Yes [Ruminococcus] torques   2 1
No Yes Eubacterium rectale M104/1   3 1
No Yes Butyrivibrio proteoclasticus B316   3 3
No Yes Butyrivibrio fibrisolvens   4 4
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   4 4
No Yes Clostridium botulinum A str. ATCC 3502   3 2
No Yes Clostridium acetobutylicum ATCC 824   7 6
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   5 2
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Streptococcus gallolyticus UCN34   2 2
No Yes Paenibacillus sp. JDR-2   8 4
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   6 6
No Yes Paenibacillus polymyxa M1   3 3
No Yes Lysinibacillus sphaericus C3-41   2 2
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   7 7
No Yes Niastella koreensis GR20-10   4 4
No Yes Chitinophaga pinensis DSM 2588   14 14
No Yes Fibrella aestuarina   2 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   2 2
No Yes Runella slithyformis DSM 19594   1 1
No Yes Paludibacter propionicigenes WB4   2 2
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella ruminicola 23   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   2 2
No Yes Bacteroides fragilis YCH46   1 1
No Yes Pedobacter heparinus DSM 2366   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Zobellia galactanivorans   1 1
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Flavobacterium johnsoniae UW101   6 6
No Yes Fibrobacter succinogenes subsp. succinogenes S85   5 5
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   3 2
No Yes Granulicella mallensis MP5ACTX8   9 8
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Campylobacter lari RM2100   2 2
No Yes Campylobacter sp. 03-427   4 4
No Yes Campylobacter fetus subsp. fetus 82-40   6 6
No Yes Helicobacter hepaticus ATCC 51449   2 2
No Yes Helicobacter cinaedi PAGU611   2 2
No Yes Geobacter uraniireducens Rf4   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   9 9
No Yes Stigmatella aurantiaca DW4/3-1   17 15
No Yes Corallococcus coralloides DSM 2259   10 9
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   3 3
No Yes Aromatoleum aromaticum EbN1   1 1
No Yes Laribacter hongkongensis HLHK9   1 1
No Yes Chromobacterium violaceum ATCC 12472   3 3
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Burkholderia sp. RPE64   2 2
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   2 1
No Yes Burkholderia pseudomallei 1106a   4 2
No Yes Burkholderia mallei SAVP1   4 2
No Yes Burkholderia ambifaria AMMD   2 2
No Yes Burkholderia glumae BGR1   2 2
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax sp. KKS102   1 1
No Yes Collimonas fungivorans Ter331   3 2
No Yes Caulobacter sp. K31   1 1
No Yes Sphingomonas wittichii RW1   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Candidatus Pelagibacter sp. IMCC9063   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   2 1
No Yes Methylobacterium sp. 4-46   2 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Saccharophagus degradans 2-40   13 10
No Yes Teredinibacter turnerae T7901   9 8
No Yes Cellvibrio japonicus Ueda107   6 4
No Yes Aggregatibacter actinomycetemcomitans D7S-1   2 2
No Yes Haemophilus parasuis SH0165   4 4
No Yes Haemophilus ducreyi 35000HP   3 3
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   2 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 2
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Ferrimonas balearica DSM 9799   6 2
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella sp. MR-4   2 1
No Yes Shewanella putrefaciens CN-32   2 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Hahella chejuensis KCTC 2396   11 10
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes gamma proteobacterium HdN1   1 1
No Yes Pectobacterium wasabiae WPP163   2 2
No Yes Pectobacterium sp. SCC3193   2 2
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   3 1
No Yes Pseudomonas putida F1   1 1
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Halopiger xanaduensis SH-6   3 3
No Yes Haloterrigena turkmenica DSM 5511   6 6
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   3 3
No Yes Haloarcula marismortui ATCC 43049   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 42 42
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 25 25
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 15 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 10 10
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 15 15
No Yes Cryptococcus neoformans var. grubii H99   5 5
No Yes Cryptococcus neoformans B-3501A   5 5
No Yes Cryptococcus neoformans JEC21   5 5
No Yes Batrachochytrium dendrobatidis JEL423   3 2
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 3 3
No Yes Hordeum vulgare 22 Domesticated barley 21 17
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 17 12
No Yes Neospora caninum Nc-Liverpool 6.2   4 4
No Yes Plasmodium falciparum HB3   2 2
No Yes Plasmodium falciparum Dd2   2 2
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   7 7
No Yes Streptomyces rapamycinicus NRRL 5491   9 9
No Yes Streptomyces davawensis JCM 4913   39 39
No Yes Streptomyces fulvissimus DSM 40593   15 15
No Yes Streptomyces venezuelae ATCC 10712   17 15
No Yes Streptomyces collinus Tu 365   15 14
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   12 11
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   23 22
No Yes Saccharothrix espanaensis DSM 44229   23 22
No Yes Amycolatopsis mediterranei RB   54 53
No Yes Amycolatopsis mediterranei S699   55 54
No Yes Amycolatopsis mediterranei S699   55 54
No Yes Amycolatopsis orientalis HCCB10007   12 10
No Yes Actinoplanes friuliensis DSM 7358   52 50
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium canettii CIPT 140070017   1 1
No Yes Mycobacterium canettii CIPT 140060008   1 1
No Yes Mycobacterium canettii CIPT 140070008   1 1
No Yes Mycobacterium canettii CIPT 140070010   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis CAS/NITR204   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   3 1
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   1 1
No Yes Bifidobacterium longum subsp. longum KACC 91563   1 1
No Yes Bifidobacterium longum subsp. longum BBMN68   1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   1 1
No Yes Bifidobacterium bifidum PRL2010   4 2
No Yes Bifidobacterium bifidum BGN4   4 2
No Yes Actinomyces graevenitzii C83   1 1
No Yes Actinomyces odontolyticus ATCC 17982   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium thermocellum DSM 1313   2 2
No Yes Faecalibacterium prausnitzii L2-6   2 2
No Yes Ruminococcus champanellensis 18P13   9 6
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Coprococcus catus GD/7   4 2
No Yes Clostridium saccharobutylicum DSM 13864   3 3
No Yes Clostridium botulinum H04402 065   3 2
No Yes Clostridium botulinum BKT015925   3 2
No Yes Clostridium botulinum B1 str. Okra   3 2
No Yes Clostridium botulinum Ba4 str. 657   3 2
No Yes Clostridium botulinum A str. Hall   3 2
No Yes Clostridium botulinum A str. ATCC 19397   3 2
No Yes Clostridium acetobutylicum DSM 1731   7 6
No Yes Clostridium acetobutylicum EA 2018   7 6
No Yes Enterococcus mundtii QU 25   5 5
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   2 2
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   2 2
No Yes Streptococcus mutans LJ23   2 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus sp. Y412MC10   3 3
No Yes Paenibacillus mucilaginosus KNP414   6 6
No Yes Paenibacillus mucilaginosus K02   6 6
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   2 2
No Yes Paenibacillus polymyxa SC2   3 3
No Yes Paenibacillus polymyxa E681   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus thuringiensis HD-789   3 2
No Yes Bacillus thuringiensis MC28   10 9
No Yes Bacillus cereus Q1   1 1
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   5 5
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   2 2
No Yes Campylobacter jejuni RM1221   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2544   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2538   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2426   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2425   2 2
No Yes Campylobacter jejuni subsp. jejuni PT14   2 2
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   2 2
No Yes Campylobacter jejuni subsp. jejuni S3   2 2
No Yes Campylobacter jejuni subsp. jejuni M1   2 2
No Yes Campylobacter jejuni subsp. jejuni IA3902   2 2
No Yes Campylobacter jejuni subsp. jejuni 81116   2 2
No Yes Campylobacter jejuni subsp. jejuni 81-176   2 2
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   2 2
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   2 2
No Yes Campylobacter coli 76339   2 2
No Yes Campylobacter coli 15-537360   1 1
No Yes Campylobacter coli CVM N29710   2 2
No Yes Sorangium cellulosum So0157-2   14 13
No Yes Myxococcus stipitatus DSM 14675   5 5
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Burkholderia sp. YI23   2 2
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia pseudomallei MSHR305   4 2
No Yes Burkholderia pseudomallei NCTC 13179   4 2
No Yes Burkholderia pseudomallei BPC006   4 2
No Yes Burkholderia pseudomallei 1026b   4 2
No Yes Burkholderia pseudomallei MSHR346   3 2
No Yes Burkholderia pseudomallei 668   4 2
No Yes Burkholderia pseudomallei 1710b   4 2
No Yes Burkholderia pseudomallei K96243   4 2
No Yes Burkholderia mallei NCTC 10229   4 2
No Yes Burkholderia mallei NCTC 10247   4 2
No Yes Burkholderia mallei ATCC 23344   4 2
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   3 3
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Bradyrhizobium oligotrophicum S58   3 3
No Yes Simiduia agarivorans SA1 = DSM 21679   3 3
No Yes Aggregatibacter actinomycetemcomitans ANH9381   2 2
No Yes Aggregatibacter actinomycetemcomitans D11S-1   2 2
No Yes Haemophilus parasuis ZJ0906   4 4
No Yes Actinobacillus suis H91-0380   1 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   1 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Shewanella sp. W3-18-1   2 1
No Yes Shewanella sp. ANA-3   2 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS223   2 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella sp. MR-7   2 1
No Yes Shewanella putrefaciens 200   2 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Stenotrophomonas maltophilia JV3   2 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   3 3
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Escherichia coli IHE3034   2 2
No Yes Escherichia coli APEC O1   2 2
No Yes Pseudomonas syringae pv. syringae B728a   2 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Acinetobacter junii SH205   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 81 80
No Yes Homo sapiens (NCBI version) Human 38 38
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 27 26
No Yes Loa loa v3.3 (Request) Eye worm 12 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 9 9
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 9 9
No Yes Moniliophthora perniciosa FA553 (Genome survey)   4 4
No Yes Encephalitozoon intestinalis (endoparasite)   2 2
No Yes Encephalitozoon cuniculi (endoparasite)   4 4
No Yes Picea sitchensis (Incomplete) Sitka spruce 10 8
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 13 10
No Yes Ricinus communis (Early assembly) Castor bean 35 23
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   9 9
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 2
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 3 3
No Yes Phoenix dactylifera (Early draft) Date palm 3 3
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 33 33
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 25 25
No Yes Gorilla gorilla 69_3.1 Western gorilla 27 27
No Yes Pongo abelii 69_2 Sumatran orangutan 25 25
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 26 26
No Yes Macaca mulatta 69_1 Rhesus monkey 26 26
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 25 25
No Yes Otolemur garnettii 69_3 Small-eared galago 26 26
No Yes Microcebus murinus 69_1 Gray mouse lemur 25 25
No Yes Rattus norvegicus 69_3.4 Norway rat 26 26
No Yes Mus musculus 69_38 House mouse 30 29
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 22 22
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 24 24
No Yes Cavia porcellus 69_3 Domestic guinea pig 23 23
No Yes Oryctolagus cuniculus 69_2 Rabbit 28 28
No Yes Ochotona princeps 69 American pika 22 22
No Yes Tupaia belangeri 69 Northern tree shrew 20 20
No Yes Sus scrofa 69_10.2 Pig 26 26
No Yes Bos taurus 69_3.1 Cattle 27 27
No Yes Vicugna pacos 69_1 Alpaca 17 17
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 25 25
No Yes Mustela putorius furo 69_1.0 Domestic ferret 28 27
No Yes Ailuropoda melanoleuca 69_1 Giant panda 27 27
No Yes Canis familiaris 69_3.1 Dog 27 27
No Yes Felis catus 69 Domestic cat 22 21
No Yes Equus caballus 69_2 Horse 28 28
No Yes Myotis lucifugus 69_2.0 Little brown bat 27 27
No Yes Pteropus vampyrus 69_1 Large flying fox 26 26
No Yes Sorex araneus 69_1 European shrew 16 15
No Yes Erinaceus europaeus 69 Western European hedgehog 20 19
No Yes Procavia capensis 69_1 Cape rock hyrax 20 20
No Yes Loxodonta africana 69_3 African savanna elephant 25 25
No Yes Echinops telfairi 69 Small Madagascar hedgehog 25 25
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 21 20
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 21 19
No Yes Macropus eugenii 69_1.0 Tammar wallaby 23 23
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 24 24
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 27 27
No Yes Ornithorhynchus anatinus 69_5 Platypus 24 24
No Yes Petromyzon marinus 69_7.0 Sea lamprey 15 15
No Yes Meleagris gallopavo 69_2 Turkey 23 23
No Yes Gallus gallus 69_2 Chicken 27 27
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 25 25
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 31 31
No Yes Anolis carolinensis 69_2.0 Green anole 26 26
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 24 24
No Yes Latimeria chalumnae 69_1 Coelacanth 25 25
No Yes Gadus morhua 69_1 Atlantic cod 31 31
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 28 28
No Yes Takifugu rubripes 69_4 Torafugu 27 27
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 29 29
No Yes Oryzias latipes 69_1 Japanese medaka 26 26
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 29 29
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 34 34
No Yes Danio rerio 69_9 Zebrafish 31 31
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 10 10
No Yes Ciona intestinalis 69 Vase tunicate 17 14
No Yes Drosophila melanogaster 69_5 Fruit fly 15 15
No Yes Caenorhabditis elegans 69_215 Roundworm 9 9
No Yes Arabidopsis thaliana 10 Thale cress 3 3
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Combined (meta-genome)   5 5
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   6 6
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   10 10
No Yes Dump top (Dump top) (meta-genome)   6 6
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   3 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   4 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   10 6
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   8 7
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   8 8
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   9 9
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   15 15
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   6 6
No Yes Mouse Gut Community ob1 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   71684 66402
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   6 6
No Yes Protozoadb 2010_08 (Protozoadb)   130 130
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   6 6
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   4 4
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   3 3
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   26 26
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   68 68
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   46 46
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   37 37
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   28 27
No Yes STRING v9.0.5 (STRING)   1919 1771
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   10 10
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   7 7
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   36655 33002
No Yes Global Ocean Sampling Expedition (GOS)   201 193
No Yes NCBI plasmid sequences (Plasmids)   116 103
No Yes NCBI viral sequences (Viral)   16 12
No Yes PDB chains (SCOP 1.75) (PDB)   49 31
No Yes Protein Data Bank (all PDB sequenc)   561 441
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1220 1220
No Yes TargetDB (Targets)   60 57
No Yes The Salmonella enterica Pan-genome (meta-genome)   33 33
No Yes UniProt viral sequences (Viral)   11 8

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