SUPERFAMILY 1.75 HMM library and genome assignments server

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STI-like superfamily domain assignments
in
Clostridium perfringens ATCC 13124

Network of domain occurrence in all genomes



No domain assignments for these genomes.


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View all assignments containing a STI-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   5662 5662
No Yes Meloidogyne hapla   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Pinus taeda Loblolly pine 4 4
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 4 4
No Yes Theobroma cacao B97-61/B2 v1 Cacao 8 8
No Yes Gossypium raimondii v221   8 8
No Yes Citrus clementina v165   27 27
No Yes Citrus sinensis v154 Sweet orange 17 17
No Yes Thellungiella halophila v173   8 8
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 36 35
No Yes Capsella rubella v183   8 8
No Yes Arabidopsis lyrata Lyrate rockcress 9 9
No Yes Arabidopsis thaliana 10 Thale cress 7 7
No Yes Carica papaya Papaya 6 6
No Yes Medicago truncatula Barrel medic 50 50
No Yes Phaseolus vulgaris v186 French bean 17 17
No Yes Glycine max v109 Soybean 48 48
No Yes Cucumis sativus v122 Cucumber 5 5
No Yes Fragaria vesca Wild strawberry 5 5
No Yes Malus domestica v196 Apple 4 4
No Yes Prunus persica v139 Peach 3 3
No Yes Linum usitatissimum v200 Flax 21 21
No Yes Manihot esculenta v147 Cassava 5 5
No Yes Populus trichocarpa v156 Black cottonwood 31 31
No Yes Vitis vinifera Wine grape 6 6
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 16 16
No Yes Solanum tuberosum Potato 36 36
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   4 4
No Yes Triticum urartu 22   3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Aegilops tauschii 22   12 10
No Yes Brachypodium distachyon Stiff brome 2 2
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   2 2
No Yes Oryza nivara 22   2 2
No Yes Oryza brachyantha 22 Malo sina 2 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 2 2
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   2 2
No Yes Clostridium tetani E88   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 8 8
No Yes Hordeum vulgare 22 Domesticated barley 2 2
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   2 2
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis YBT-1518   6 6
No Yes Lotus japonicus (Early assembly)   23 23
No Yes Malus x domestica (Duplicate) Apple 4 4
No Yes Ricinus communis (Early assembly) Castor bean 3 3
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   13 13
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 16 16
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 16 16
No Yes Arabidopsis thaliana 10 Thale cress 7 7
No Yes NCBI 2017_08 genome   1534 1527
No Yes STRING v9.0.5 (STRING)   67 67
No Yes Uniprot 2018_03 genome   2405 2387
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   15 15
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   22 22
No Yes Protein Data Bank (all PDB sequenc)   226 226
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   510 510
No Yes UniProt viral sequences (Viral)   4 4

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