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Hemopexin-like domain superfamily domain assignments
in
Brachypodium distachyon


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Select to display   Genome       Domains   Proteins
No Yes ALL   22070 22070
No Yes Homo sapiens 76_38 Human 50 49
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 24 23
No Yes Gorilla gorilla 76_3.1 Western gorilla 30 29
No Yes Pongo abelii 76_2 Sumatran orangutan 21 20
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 29 27
No Yes Papio anubis 76 Olive baboon 26 25
No Yes Macaca mulatta 76_1 Rhesus monkey 27 26
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 39 38
No Yes Otolemur garnettii 76_3 Small-eared galago 24 23
No Yes Microcebus murinus 76_1 Gray mouse lemur 25 20
No Yes Rattus norvegicus 76_5.0 Norway rat 27 26
No Yes Mus musculus 76_38 House mouse 41 40
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 25 23
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 22 22
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 24 23
No Yes Cavia porcellus 76_3 Domestic guinea pig 20 19
No Yes Oryctolagus cuniculus 76_2 Rabbit 26 25
No Yes Ochotona princeps 76 American pika 25 22
No Yes Tupaia belangeri 76 Northern tree shrew 22 20
No Yes Sus scrofa 76_10.2 Pig 25 24
No Yes Bos taurus 76_3.1 Cattle 24 23
No Yes Ovis aries 76_3.1 Sheep 26 25
No Yes Vicugna pacos 76_1 Alpaca 10 9
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 20 19
No Yes Mustela putorius furo 76_1.0 Domestic ferret 24 23
No Yes Ailuropoda melanoleuca 76_1 Giant panda 26 25
No Yes Canis familiaris 76_3.1 Dog 26 25
No Yes Felis catus 76_6.2 Domestic cat 24 23
No Yes Equus caballus 76_2 Horse 24 23
No Yes Myotis lucifugus 76_2.0 Little brown bat 23 22
No Yes Pteropus vampyrus 76_1 Large flying fox 24 22
No Yes Sorex araneus 76_1 European shrew 17 16
No Yes Erinaceus europaeus 76 Western European hedgehog 19 18
No Yes Procavia capensis 76_1 Cape rock hyrax 24 21
No Yes Loxodonta africana 76_3 African savanna elephant 29 28
No Yes Echinops telfairi 76 Small Madagascar hedgehog 21 18
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 26 25
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 12 11
No Yes Macropus eugenii 76_1.0 Tammar wallaby 24 21
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 27 26
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 23 22
No Yes Ornithorhynchus anatinus 76_5 Platypus 19 19
No Yes Saccoglossus kowalevskii v3.0   14 14
No Yes Petromyzon marinus 76_7.0 Sea lamprey 9 9
No Yes Meleagris gallopavo 76_2 Turkey 30 27
No Yes Gallus gallus 76_4 Chicken 18 17
No Yes Anas platyrhynchos 76_1.0 Mallard 19 19
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 13 13
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 15 15
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 19 19
No Yes Anolis carolinensis 76_2.0 Green anole 19 19
No Yes Xenopus laevis African clawed frog 60 60
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 35 34
No Yes Latimeria chalumnae 76_1 Coelacanth 31 30
No Yes Lepisosteus oculatus 76 Spotted gar 26 25
No Yes Gadus morhua 76_1 Atlantic cod 31 28
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 40 37
No Yes Takifugu rubripes 76_4 Torafugu 98 93
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 38 35
No Yes Oryzias latipes 76_1 Japanese medaka 38 34
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 31 28
No Yes Poecilia formosa 76 Amazon molly 39 35
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 44 40
No Yes Astyanax mexicanus 76 Mexican tetra 36 32
No Yes Danio rerio 76_9 Zebrafish 47 41
No Yes Oikopleura dioica   3 3
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 20 20
No Yes Ciona intestinalis 76 Vase tunicate 8 8
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 30 30
No Yes Adineta vaga   11 11
No Yes Octopus bimaculoides 280   9 9
No Yes Crassostrea gigas 22 Pacific oyster 4 4
No Yes Lottia gigantea Owl limpet 8 8
No Yes Helobdella robusta   8 8
No Yes Capitella sp. I   8 8
No Yes Danaus plexippus OGS1.0 Monarch butterfly 3 3
No Yes Heliconius melpomene Postman butterfly 3 3
No Yes Bombyx mori Domestic silkworm 3 3
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 7 7
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2
No Yes Linepithema humile v1.1 Argentine ant 2 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 2
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 9 9
No Yes Atta cephalotes v1.1   2 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 8 8
No Yes Lucilia cuprina Australian sheep blowfly 2 2
No Yes Drosophila grimshawi 1.3   2 2
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   2 2
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 11 11
No Yes Drosophila erecta 1.3   2 2
No Yes Drosophila ananassae 1.3   2 2
No Yes Drosophila virilis 1.2   2 2
No Yes Drosophila mojavensis 1.3   2 2
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 8 8
No Yes Culex pipiens quinquefasciatus Southern house mosquito 8 8
No Yes Anopheles darlingi 22 American malaria mosquito 3 3
No Yes Anopheles gambiae 49_3j African malaria mosquito 5 5
No Yes Tribolium castaneum 3.0 Red flour beetle 11 10
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 2
No Yes Acyrthosiphon pisum Pea aphid 3 3
No Yes Rhodnius prolixus 22   6 6
No Yes Daphnia pulex Common water flea 4 4
No Yes Strigamia maritima 22   4 4
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 3 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 2 2
No Yes Pristionchus pacificus   6 6
No Yes Onchocerca volvulus 22   4 4
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 4 4
No Yes Caenorhabditis japonica   5 5
No Yes Caenorhabditis brenneri   6 6
No Yes Caenorhabditis remanei   6 6
No Yes Caenorhabditis elegans 76_235 Roundworm 7 7
No Yes Caenorhabditis briggsae 2   6 6
No Yes Trichinella spiralis 22   2 2
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 17 16
No Yes Acropora digitifera v1.0   5 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 7 7
No Yes Hydra vulgaris   10 10
No Yes Amphimedon queenslandica   1 1
No Yes Capsaspora owczarzaki ATCC 30864   3 3
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Hebeloma cylindrosporum h7 v2.0   5 5
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Postia placenta   7 7
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Pinus taeda Loblolly pine 2 2
No Yes Picea abies Norway spruce 1 1
No Yes Medicago truncatula Barrel medic 24 20
No Yes Phaseolus vulgaris v186 French bean 26 24
No Yes Actinidia chinensis Hongyang   1 1
No Yes Triticum urartu 22   1 1
No Yes Aegilops tauschii 22   1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza nivara 22   1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 1
No Yes Oryza sativa v193 Rice 2 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Thecamonas trahens ATCC 50062   3 3
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Maricaulis maris MCS10   1 1
No Yes Shewanella denitrificans OS217   8 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Photorhabdus asymbiotica   3 2
No Yes Photorhabdus luminescens subsp. laumondii TTO1   4 3
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 52 49
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 10 10
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 5 5
No Yes Ascaris suum Victoria/Ghent Pig roundworm 6 6
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 6
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 52 51
No Yes Homo sapiens (NCBI version) Human 29 28
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 25 24
No Yes Loa loa v3.3 (Request) Eye worm 6 5
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 4 4
No Yes Lotus japonicus (Early assembly)   7 7
No Yes Phoenix dactylifera (Early draft) Date palm 2 1
No Yes Homo sapiens 69_37 Human 28 27
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 22 21
No Yes Gorilla gorilla 69_3.1 Western gorilla 24 23
No Yes Pongo abelii 69_2 Sumatran orangutan 21 20
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 25 23
No Yes Macaca mulatta 69_1 Rhesus monkey 25 24
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 24 23
No Yes Otolemur garnettii 69_3 Small-eared galago 24 23
No Yes Microcebus murinus 69_1 Gray mouse lemur 25 20
No Yes Rattus norvegicus 69_3.4 Norway rat 26 25
No Yes Mus musculus 69_38 House mouse 25 24
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 25 23
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 21 21
No Yes Cavia porcellus 69_3 Domestic guinea pig 20 19
No Yes Oryctolagus cuniculus 69_2 Rabbit 23 22
No Yes Ochotona princeps 69 American pika 25 22
No Yes Tupaia belangeri 69 Northern tree shrew 22 20
No Yes Sus scrofa 69_10.2 Pig 22 21
No Yes Bos taurus 69_3.1 Cattle 23 22
No Yes Vicugna pacos 69_1 Alpaca 10 9
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 20 19
No Yes Mustela putorius furo 69_1.0 Domestic ferret 24 23
No Yes Ailuropoda melanoleuca 69_1 Giant panda 25 24
No Yes Canis familiaris 69_3.1 Dog 23 22
No Yes Felis catus 69 Domestic cat 22 20
No Yes Equus caballus 69_2 Horse 22 21
No Yes Myotis lucifugus 69_2.0 Little brown bat 23 22
No Yes Pteropus vampyrus 69_1 Large flying fox 24 22
No Yes Sorex araneus 69_1 European shrew 17 16
No Yes Erinaceus europaeus 69 Western European hedgehog 19 18
No Yes Procavia capensis 69_1 Cape rock hyrax 24 21
No Yes Loxodonta africana 69_3 African savanna elephant 25 24
No Yes Echinops telfairi 69 Small Madagascar hedgehog 21 18
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 16 15
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 12 11
No Yes Macropus eugenii 69_1.0 Tammar wallaby 24 21
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 23 22
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 23 22
No Yes Ornithorhynchus anatinus 69_5 Platypus 19 19
No Yes Petromyzon marinus 69_7.0 Sea lamprey 8 8
No Yes Meleagris gallopavo 69_2 Turkey 16 15
No Yes Gallus gallus 69_2 Chicken 16 16
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 13 13
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 17 17
No Yes Anolis carolinensis 69_2.0 Green anole 19 19
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 28 27
No Yes Latimeria chalumnae 69_1 Coelacanth 26 26
No Yes Gadus morhua 69_1 Atlantic cod 28 25
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 29 27
No Yes Takifugu rubripes 69_4 Torafugu 26 23
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 27 25
No Yes Oryzias latipes 69_1 Japanese medaka 29 27
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 31 28
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 33 30
No Yes Danio rerio 69_9 Zebrafish 35 31
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 8 8
No Yes Ciona intestinalis 69 Vase tunicate 8 8
No Yes Drosophila melanogaster 69_5 Fruit fly 2 2
No Yes Caenorhabditis elegans 69_215 Roundworm 6 6
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   8947 8304
No Yes Protozoadb 2010_08 (Protozoadb)   5 5
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   763 722
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   6477 5945
No Yes Global Ocean Sampling Expedition (GOS)   9 9
No Yes NCBI viral sequences (Viral)   18 18
No Yes PDB chains (SCOP 1.75) (PDB)   11 10
No Yes Protein Data Bank (all PDB sequenc)   73 50
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   136 136
No Yes TargetDB (Targets)   19 19
No Yes UniProt viral sequences (Viral)   15 15

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