SUPERFAMILY 1.75 HMM library and genome assignments server

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Tachylectin-2 superfamily domain assignments
in
Bifidobacterium adolescentis ATCC 15703

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Select to display   Genome       Domains   Proteins
No Yes ALL   815 815
No Yes Xenopus laevis African clawed frog 8 6
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 6 5
No Yes Lepisosteus oculatus 76 Spotted gar 3 3
No Yes Acropora digitifera v1.0   2 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 9 7
No Yes Frankia sp. EuI1c   2 1
No Yes Saccharothrix espanaensis DSM 44229   2 2
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 6 5
No Yes 4_050719Q (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   327 284
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   6 5
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   284 260
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   72 72
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   35 35

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