SUPERFAMILY 1.75 HMM library and genome assignments server

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WD40-repeat family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   123301 123301
No Yes Homo sapiens 76_38 Human 148 148
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 39 39
No Yes Gorilla gorilla 76_3.1 Western gorilla 50 50
No Yes Pongo abelii 76_2 Sumatran orangutan 44 44
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 39 39
No Yes Papio anubis 76 Olive baboon 41 41
No Yes Macaca mulatta 76_1 Rhesus monkey 70 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 84 84
No Yes Otolemur garnettii 76_3 Small-eared galago 43 43
No Yes Microcebus murinus 76_1 Gray mouse lemur 27 27
No Yes Rattus norvegicus 76_5.0 Norway rat 50 50
No Yes Mus musculus 76_38 House mouse 109 109
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 30 30
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 40 40
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 41 41
No Yes Cavia porcellus 76_3 Domestic guinea pig 40 40
No Yes Oryctolagus cuniculus 76_2 Rabbit 39 39
No Yes Ochotona princeps 76 American pika 28 28
No Yes Tupaia belangeri 76 Northern tree shrew 25 25
No Yes Sus scrofa 76_10.2 Pig 46 46
No Yes Bos taurus 76_3.1 Cattle 41 41
No Yes Ovis aries 76_3.1 Sheep 52 52
No Yes Vicugna pacos 76_1 Alpaca 20 20
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 35 35
No Yes Mustela putorius furo 76_1.0 Domestic ferret 44 44
No Yes Ailuropoda melanoleuca 76_1 Giant panda 45 45
No Yes Canis familiaris 76_3.1 Dog 63 63
No Yes Felis catus 76_6.2 Domestic cat 46 46
No Yes Equus caballus 76_2 Horse 47 47
No Yes Myotis lucifugus 76_2.0 Little brown bat 47 46
No Yes Pteropus vampyrus 76_1 Large flying fox 31 31
No Yes Sorex araneus 76_1 European shrew 18 18
No Yes Erinaceus europaeus 76 Western European hedgehog 19 18
No Yes Procavia capensis 76_1 Cape rock hyrax 28 28
No Yes Loxodonta africana 76_3 African savanna elephant 57 57
No Yes Echinops telfairi 76 Small Madagascar hedgehog 24 24
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 47 46
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 13 13
No Yes Macropus eugenii 76_1.0 Tammar wallaby 29 29
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 40 40
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 46 46
No Yes Ornithorhynchus anatinus 76_5 Platypus 34 34
No Yes Saccoglossus kowalevskii v3.0   90 88
No Yes Petromyzon marinus 76_7.0 Sea lamprey 22 21
No Yes Meleagris gallopavo 76_2 Turkey 42 42
No Yes Gallus gallus 76_4 Chicken 39 39
No Yes Anas platyrhynchos 76_1.0 Mallard 40 40
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 41 41
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 34 34
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 34 34
No Yes Anolis carolinensis 76_2.0 Green anole 36 36
No Yes Xenopus laevis African clawed frog 101 101
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 59 59
No Yes Latimeria chalumnae 76_1 Coelacanth 51 51
No Yes Lepisosteus oculatus 76 Spotted gar 53 52
No Yes Gadus morhua 76_1 Atlantic cod 39 39
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 42 42
No Yes Takifugu rubripes 76_4 Torafugu 118 117
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 51 51
No Yes Oryzias latipes 76_1 Japanese medaka 50 50
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 42 42
No Yes Poecilia formosa 76 Amazon molly 40 39
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 56 56
No Yes Astyanax mexicanus 76 Mexican tetra 43 43
No Yes Danio rerio 76_9 Zebrafish 66 66
No Yes Oikopleura dioica   16 16
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 58 58
No Yes Ciona intestinalis 76 Vase tunicate 26 26
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 31 31
No Yes Adineta vaga   87 85
No Yes Octopus bimaculoides 280   32 32
No Yes Crassostrea gigas 22 Pacific oyster 28 28
No Yes Lottia gigantea Owl limpet 31 31
No Yes Helobdella robusta   32 31
No Yes Capitella sp. I   28 28
No Yes Danaus plexippus OGS1.0 Monarch butterfly 23 23
No Yes Heliconius melpomene Postman butterfly 19 18
No Yes Bombyx mori Domestic silkworm 18 18
No Yes Nasonia vitripennis Jewel wasp 26 25
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 50 49
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 24 24
No Yes Linepithema humile v1.1 Argentine ant 25 24
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 24 24
No Yes Solenopsis invicta v.2.2.3 Red fire ant 19 19
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 26 26
No Yes Atta cephalotes v1.1   21 21
No Yes Camponotus floridanus v3.3 Florida carpenter ant 25 25
No Yes Lucilia cuprina Australian sheep blowfly 24 23
No Yes Drosophila grimshawi 1.3   32 32
No Yes Drosophila willistoni 1.3   30 29
No Yes Drosophila pseudoobscura 2.13   27 26
No Yes Drosophila persimilis 1.3   29 28
No Yes Drosophila suzukii   27 25
No Yes Drosophila yakuba 1.3   25 24
No Yes Drosophila simulans 1.3   23 22
No Yes Drosophila sechellia 1.3   23 22
No Yes Drosophila melanogaster 76_5 Fruit fly 52 50
No Yes Drosophila erecta 1.3   23 22
No Yes Drosophila ananassae 1.3   29 28
No Yes Drosophila virilis 1.2   26 25
No Yes Drosophila mojavensis 1.3   27 26
No Yes Megaselia scalaris 22   8 8
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 25 24
No Yes Culex pipiens quinquefasciatus Southern house mosquito 34 33
No Yes Anopheles darlingi 22 American malaria mosquito 20 19
No Yes Anopheles gambiae 49_3j African malaria mosquito 30 29
No Yes Tribolium castaneum 3.0 Red flour beetle 25 24
No Yes Pediculus humanus corporis (Early assembly) Human body louse 27 27
No Yes Acyrthosiphon pisum Pea aphid 25 25
No Yes Rhodnius prolixus 22   21 21
No Yes Daphnia pulex Common water flea 29 29
No Yes Strigamia maritima 22   28 27
No Yes Sarcoptes scabiei   17 17
No Yes Tetranychus urticae Two-spotted spider mite 27 27
No Yes Ixodes scapularis (Preliminary) Black-legged tick 21 21
No Yes Pristionchus pacificus   12 12
No Yes Meloidogyne incognita Southern root-knot nematode 19 19
No Yes Meloidogyne hapla   12 11
No Yes Onchocerca volvulus 22   19 18
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 33 30
No Yes Caenorhabditis japonica   13 12
No Yes Caenorhabditis brenneri   24 22
No Yes Caenorhabditis remanei   19 18
No Yes Caenorhabditis elegans 76_235 Roundworm 31 28
No Yes Caenorhabditis briggsae 2   20 19
No Yes Trichinella spiralis 22   15 15
No Yes Hymenolepis microstoma   20 19
No Yes Echinococcus multilocularis   19 19
No Yes Echinococcus granulosus   18 18
No Yes Taenia solium Pork tapeworm 16 16
No Yes Schistosoma mansoni   24 24
No Yes Mnemiopsis leidyi Sea walnut 23 23
No Yes Thelohanellus kitauei   4 4
No Yes Acropora digitifera v1.0   9 9
No Yes Nematostella vectensis 1.0 Starlet sea anemone 41 41
No Yes Hydra vulgaris   23 23
No Yes Amphimedon queenslandica   42 42
No Yes Trichoplax adhaerens   36 35
No Yes Proterospongia sp. ATCC 50818   38 32
No Yes Monosiga brevicollis   18 18
No Yes Sphaeroforma arctica JP610   16 16
No Yes Capsaspora owczarzaki ATCC 30864   20 20
No Yes Conidiobolus coronatus NRRL28638 v1.0   20 20
No Yes Mortierella verticillata NRRL 6337   35 34
No Yes Phycomyces blakesleeanus   40 40
No Yes Rhizopus oryzae RA 99-880   35 35
No Yes Mucor circinelloides   47 46
No Yes Rhizomucor miehei CAU432   34 34
No Yes Malassezia globosa CBS 7966   29 29
No Yes Sporisorium reilianum 22   18 18
No Yes Ustilago maydis   14 14
No Yes Mixia osmundae IAM 14324 v1.0   16 16
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   18 18
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   12 12
No Yes Melampsora laricis-populina   18 18
No Yes Rhodotorula graminis WP1 v1.0   16 16
No Yes Sporobolomyces roseus IAM 13481   13 13
No Yes Microbotryum violaceum 22   21 21
No Yes Wallemia sebi v1.0   14 14
No Yes Sphaerobolus stellatus v1.0   150 121
No Yes Piloderma croceum F 1598 v1.0   165 124
No Yes Serpula lacrymans var. lacrymans S7.9   29 26
No Yes Coniophora puteana   83 67
No Yes Hydnomerulius pinastri v2.0   83 70
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   31 31
No Yes Pisolithus microcarpus 441 v1.0   72 61
No Yes Pisolithus tinctorius Marx 270 v1.0   75 63
No Yes Scleroderma citrinum Foug A v1.0   67 59
No Yes Coprinopsis cinerea okayama7 130 v3   26 24
No Yes Pleurotus ostreatus Oyster mushroom 30 28
No Yes Amanita thiersii Skay4041 v1.0   21 21
No Yes Amanita muscaria Koide v1.0 Fly agaric 54 53
No Yes Galerina marginata v1.0   43 37
No Yes Hebeloma cylindrosporum h7 v2.0   38 34
No Yes Laccaria bicolor S238N-H82   103 97
No Yes Agaricus bisporus var. bisporus   21 21
No Yes Schizophyllum commune   26 22
No Yes Stereum hirsutum FP-91666 SS1 v1.0   40 34
No Yes Heterobasidion annosum   37 34
No Yes Gloeophyllum trabeumv1.0   26 24
No Yes Punctularia strigosozonata v1.0   74 70
No Yes Sebacina vermifera MAFF 305830 v1.0   224 161
No Yes Fomitiporia mediterranea v1.0   106 78
No Yes Tulasnella calospora AL13/4D v1.0   84 71
No Yes Postia placenta   45 44
No Yes Wolfiporia cocos MD-104 SS10 v1.0   37 35
No Yes Fomitopsis pinicolav1.0   27 27
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   26 26
No Yes Phanerochaete chrysosporium RP-78 2.1   24 24
No Yes Dichomitus squalens   53 50
No Yes Trametes versicolor v1.0   26 25
No Yes Tremella mesenterica Witches' butter 14 14
No Yes Daldinia eschscholzii EC12 v1.0   17 17
No Yes Apiospora montagnei NRRL 25634 v1.0   16 16
No Yes Magnaporthe poae ATCC 64411 22   14 14
No Yes Magnaporthe grisea 70-15   16 15
No Yes Podospora anserina   30 27
No Yes Sporotrichum thermophile ATCC 42464   15 15
No Yes Thielavia terrestris NRRL 8126   18 18
No Yes Chaetomium globosum CBS 148.51   23 20
No Yes Neurospora tetrasperma   14 14
No Yes Neurospora discreta FGSC 8579   17 16
No Yes Neurospora crassa OR74A   16 16
No Yes Cryphonectria parasitica Chestnut blight fungus 16 16
No Yes Verticillium albo-atrum VaMs.102   15 15
No Yes Verticillium dahliae VdLs.17   17 17
No Yes Acremonium alcalophilumv 1.0   18 17
No Yes Glomerella graminicola 22   17 17
No Yes Fusarium graminearum   17 17
No Yes Nectria haematococca mpVI   25 24
No Yes Fusarium oxysporum f. sp. lycopersici 4286   27 27
No Yes Fusarium verticillioides 7600   16 16
No Yes Trichoderma asperellum CBS 433.97 v1.0   22 21
No Yes Trichoderma atroviride   31 29
No Yes Trichoderma citrinoviride v1.0   15 14
No Yes Trichoderma reesei 1.2   20 19
No Yes Trichoderma virens Gv29-8   37 33
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   13 13
No Yes Trichoderma harzianum CBS 226.95 v1.0   36 33
No Yes Amorphotheca resinae v1.0 Creosote fungus 16 15
No Yes Botrytis cinerea B05.10   16 16
No Yes Sclerotinia sclerotiorum   28 26
No Yes Blumeria graminis 22   13 13
No Yes Didymella exigua CBS 183.55 v1.0   17 17
No Yes Leptosphaeria maculans 22   16 16
No Yes Setosphaeria turcica v1.0   32 28
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   27 26
No Yes Cochliobolus victoriae FI3 v1.0   30 26
No Yes Cochliobolus carbonum 26-R-13 v1.0   28 25
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 36 30
No Yes Alternaria brassicicola   15 15
No Yes Cochliobolus lunatus m118 v2.0   28 25
No Yes Pyrenophora teres f. teres 22   15 15
No Yes Pyrenophora tritici-repentis   24 21
No Yes Stagonospora nodorum   17 17
No Yes Mycosphaerella graminicola IPO323   17 16
No Yes Zasmidium cellare ATCC 36951 v1.0   18 17
No Yes Dothistroma septosporum   15 15
No Yes Septoria musiva v1.0   16 15
No Yes Mycosphaerella fijiensis CIRAD86   12 12
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   16 16
No Yes Paracoccidioides brasiliensis Pb18   11 11
No Yes Coccidioides posadasii RMSCC 3488   16 16
No Yes Coccidioides immitis RS   17 17
No Yes Ajellomyces dermatitidis SLH14081   15 15
No Yes Histoplasma capsulatum class NAmI strain WU24   13 13
No Yes Microsporum canis CBS 113480   16 16
No Yes Trichophyton equinum CBS 127.97   14 13
No Yes Trichophyton verrucosum HKI 0517   15 13
No Yes Arthroderma benhamiae CBS 112371   15 14
No Yes Trichophyton tonsurans CBS 112818   18 17
No Yes Trichophyton rubrum CBS 118892   14 14
No Yes Uncinocarpus reesii 1704   15 15
No Yes Aspergillus zonatus v1.0   17 17
No Yes Penicillium chrysogenum Wisconsin 54-1255   24 23
No Yes Penicillium chrysogenum v1.0   25 24
No Yes Aspergillus acidus v1.0   20 20
No Yes Aspergillus fumigatus Af293   19 19
No Yes Aspergillus brasiliensis v1.0   19 19
No Yes Aspergillus nidulans FGSC A4   23 22
No Yes Aspergillus sydowii v1.0   18 18
No Yes Aspergillus versicolor v1.0   23 21
No Yes Aspergillus glaucus   17 17
No Yes Aspergillus carbonarius ITEM 5010   18 17
No Yes Neosartorya fischeri NRRL 181   18 18
No Yes Aspergillus terreus NIH2624   21 19
No Yes Aspergillus tubingensis v1.0   17 17
No Yes Aspergillus wentii v1.0   25 23
No Yes Aspergillus oryzae RIB40   24 24
No Yes Aspergillus niger 22   20 20
No Yes Aspergillus niger ATCC 1015   13 13
No Yes Aspergillus flavus NRRL3357   17 17
No Yes Aspergillus clavatus NRRL 1   18 18
No Yes Penicillium marneffei ATCC 18224   20 19
No Yes Tuber melanosporum Mel28 22   16 16
No Yes Tuber melanosporum Vittad Perigord truffle 16 16
No Yes Hansenula polymorpha v2.0   14 14
No Yes Dekkera bruxellensis CBS 2499 v2.0   14 14
No Yes Pichia membranifaciensv1.0   15 14
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   14 13
No Yes Candida dubliniensis CD36   11 11
No Yes Candida tropicalis MYA-3404   9 9
No Yes Candida parapsilosis   14 14
No Yes Candida albicans SC5314   11 11
No Yes Lodderomyces elongisporus NRRL YB-4239   11 11
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   15 15
No Yes Pichia stipitis CBS 6054   14 13
No Yes Candida guilliermondii ATCC 6260   10 10
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   13 12
No Yes Debaromyces hansenii   12 12
No Yes Wickerhamomyces anomalus   18 18
No Yes Pichia pastoris GS115   14 13
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   5 5
No Yes Yarrowia lipolytica CLIB122   18 17
No Yes Candida lusitaniae ATCC 42720   12 12
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   11 11
No Yes Vanderwaltozyma polyspora DSM 70294   15 14
No Yes Candida glabrata CBS138   14 13
No Yes Kluyveromyces thermotolerans CBS 6340   17 16
No Yes Lachancea kluyveri   17 16
No Yes Kluyveromyces waltii   15 14
No Yes Ashbya gossypii ATCC 10895   13 12
No Yes Zygosaccharomyces rouxii   15 14
No Yes Saccharomyces mikatae MIT   14 13
No Yes Saccharomyces paradoxus MIT   16 15
No Yes Saccharomyces cerevisiae 76 Baker's yeast 16 15
No Yes Saccharomyces bayanus MIT   15 14
No Yes Kluyveromyces lactis   12 11
No Yes Schizosaccharomyces cryophilus OY26 22   18 17
No Yes Schizosaccharomyces octosporus yFS286   17 17
No Yes Schizosaccharomyces japonicus yFS275   17 17
No Yes Schizosaccharomyces pombe Fission yeast 15 15
No Yes Catenaria anguillulae PL171 v1.0   26 26
No Yes Allomyces macrogynus ATCC 38327   47 47
No Yes Spizellomyces punctatus DAOM BR117   27 27
No Yes Dictyostelium discoideum   29 28
No Yes Dictyostelium purpureum   26 25
No Yes Entamoeba dispar 1.2   12 12
No Yes Entamoeba invadens 1.2   4 4
No Yes Entamoeba histolytica 1   11 11
No Yes Selaginella moellendorffii   43 42
No Yes Pinus taeda Loblolly pine 10 9
No Yes Picea abies Norway spruce 8 8
No Yes Eucalyptus grandis v201 Rose gum 36 36
No Yes Theobroma cacao B97-61/B2 v1 Cacao 21 20
No Yes Gossypium raimondii v221   110 110
No Yes Citrus clementina v165   38 38
No Yes Citrus sinensis v154 Sweet orange 58 58
No Yes Thellungiella halophila v173   28 28
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 37 37
No Yes Capsella rubella v183   28 27
No Yes Arabidopsis lyrata Lyrate rockcress 30 30
No Yes Arabidopsis thaliana 10 Thale cress 53 53
No Yes Carica papaya Papaya 15 15
No Yes Medicago truncatula Barrel medic 36 35
No Yes Phaseolus vulgaris v186 French bean 36 35
No Yes Glycine max v109 Soybean 57 56
No Yes Cucumis sativus v122 Cucumber 41 41
No Yes Fragaria vesca Wild strawberry 19 19
No Yes Malus domestica v196 Apple 36 36
No Yes Prunus persica v139 Peach 23 23
No Yes Linum usitatissimum v200 Flax 44 43
No Yes Manihot esculenta v147 Cassava 36 36
No Yes Populus trichocarpa v156 Black cottonwood 30 30
No Yes Vitis vinifera Wine grape 29 28
No Yes Mimulus guttatus v140 Spotted monkey flower 28 28
No Yes Solanum lycopersicum v.2.3 Tomato 25 25
No Yes Solanum tuberosum Potato 17 17
No Yes Actinidia chinensis Hongyang   23 23
No Yes Aquilegia coerulea v195   81 81
No Yes Triticum urartu 22   19 19
No Yes Triticum aestivum 22 Bread wheat 53 53
No Yes Aegilops tauschii 22   17 17
No Yes Brachypodium distachyon Stiff brome 40 40
No Yes Oryza barthii 22 African wild rice 36 35
No Yes Oryza meridionalis 22   24 23
No Yes Oryza glumaepatula 22   36 36
No Yes Oryza glaberrima African rice 21 21
No Yes Oryza punctata 22   39 39
No Yes Oryza nivara 22   40 39
No Yes Oryza brachyantha 22 Malo sina 22 22
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 34 34
No Yes Oryza sativa v193 Rice 31 31
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 25 25
No Yes Panicum virgatum v202 Switchgrass 43 42
No Yes Setaria italica v164 Foxtail millet 30 30
No Yes Zea mays subsp. mays Maize 48 48
No Yes Zea mays v181 Maize 62 62
No Yes Sorghum bicolor Sorghum 15 15
No Yes Musa balbisiana Balbis banana 24 23
No Yes Musa acuminata 22 Wild Malaysian banana 29 28
No Yes Amborella trichopoda 22   21 21
No Yes Physcomitrella patens   36 36
No Yes Coccomyxa subellipsoidea sp. C-169 v2   10 10
No Yes Asterochloris sp. Cgr/DA1pho v1.0   17 15
No Yes Chlorella variabilis sp. NC64A   12 12
No Yes Chlorella vulgaris   10 9
No Yes Volvox carteri f. nagariensis   24 22
No Yes Volvox carteri v199   23 22
No Yes Chlamydomonas reinhardtii 4.0   24 23
No Yes Ostreococcus sp. RCC809   9 9
No Yes Ostreococcus lucimarinus CCE9901   8 8
No Yes Ostreococcus tauri   8 8
No Yes Bathycoccus prasinos   8 8
No Yes Micromonas sp. RCC299   16 16
No Yes Micromonas pusilla CCMP1545 v3.0   17 17
No Yes Cyanidioschyzon merolae strain 10D 22   4 4
No Yes Cyanidioschyzon merolae   4 4
No Yes Porphyridium purpureum 02_2012   13 13
No Yes Thecamonas trahens ATCC 50062   33 30
No Yes Bigelowiella natans CCMP2755 22   28 27
No Yes Cyanophora paradoxa   28 25
No Yes Leishmania mexicana 2.4   7 7
No Yes Leishmania major strain Friedlin   7 7
No Yes Leishmania infantum JPCM5 2.4   8 8
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   4 4
No Yes Trypanosoma vivax   9 9
No Yes Trypanosoma cruzi strain CL Brener   6 6
No Yes Trypanosoma congolense 2.4   6 6
No Yes Trypanosoma brucei gambiense v4.1   7 7
No Yes Trypanosoma brucei TREU927 v4.1   8 8
No Yes Ectocarpus siliculosus   13 13
No Yes Aureococcus anophagefferens   34 33
No Yes Albugo laibachii 22   17 17
No Yes Pythium iwayamai DAOM BR242034 22   19 19
No Yes Pythium arrhenomanes ATCC 12531 22   9 9
No Yes Pythium ultimum v1.7-2   17 17
No Yes Pythium aphanidermatum DAOM BR444 22   11 11
No Yes Pythium irregulare DAOM BR486 22   16 16
No Yes Pythium vexans DAOM BR484 22   12 12
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 17 17
No Yes Phytophthora sojae 1.1   18 18
No Yes Phytophthora infestans T30-4   21 20
No Yes Phytophthora capsici   17 17
No Yes Hyaloperonospora arabidopsidis 22   21 19
No Yes Phaeodactylum tricornutumCCAP 1055/1   10 10
No Yes Fragilariopsis cylindrus   15 15
No Yes Thalassiosira pseudonana CCMP1335   7 7
No Yes Perkinsus marinus ATCC 50983   13 13
No Yes Paramecium tetraurelia   100 81
No Yes Tetrahymena thermophila SB210 1   44 32
No Yes Ichthyophthirius multifiliis strain G5   12 12
No Yes Cryptosporidium hominis   4 4
No Yes Cryptosporidium muris   5 5
No Yes Cryptosporidium parvum Iowa II   7 7
No Yes Neospora caninum   5 5
No Yes Toxoplasma gondii VEG   5 5
No Yes Toxoplasma gondii ME49   6 6
No Yes Toxoplasma gondii GT1   6 6
No Yes Babesia bovis T2Bo   4 4
No Yes Theileria parva   2 2
No Yes Theileria annulata   2 2
No Yes Plasmodium falciparum 3D7   2 2
No Yes Plasmodium vivax SaI-1 7.0   2 2
No Yes Plasmodium knowlesi strain H   3 3
No Yes Plasmodium yoelii ssp. yoelii 1   4 4
No Yes Plasmodium chabaudi   4 4
No Yes Plasmodium berghei ANKA   4 4
No Yes Symbiodinium minutum clade B1 v1.2   15 14
No Yes Naegleria gruberi   20 20
No Yes Trichomonas vaginalis   20 20
No Yes Guillardia theta CCMP2712 v1.0   50 47
No Yes Emiliania huxleyi CCMP1516   20 20
No Yes Leptolyngbya sp. PCC 7376   14 9
No Yes Pseudanabaena sp. PCC 7367   4 4
No Yes Acaryochloris marina MBIC11017   48 28
No Yes Synechocystis sp. PCC 6803   4 3
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   5 5
No Yes Microcoleus sp. PCC 7113   49 36
No Yes Trichodesmium erythraeum IMS101   19 16
No Yes Geitlerinema sp. PCC 7407   6 4
No Yes Cyanothece sp. PCC 8802   8 6
No Yes Gloeocapsa sp. PCC 7428   10 8
No Yes Halothece sp. PCC 7418   2 2
No Yes Microcystis aeruginosa NIES-843   14 11
No Yes Gloeobacter violaceus PCC 7421   18 10
No Yes Rivularia sp. PCC 7116   34 27
No Yes Calothrix sp. PCC 7507   25 19
No Yes Anabaena variabilis ATCC 29413   34 23
No Yes 'Nostoc azollae' 0708   5 5
No Yes Nostoc sp. PCC 7107   17 14
No Yes Nostoc punctiforme PCC 73102   38 24
No Yes Nostoc sp. PCC 7120   31 21
No Yes Nostoc sp. PCC 7524   32 22
No Yes Anabaena sp. 90   18 14
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Frankia symbiont of Datisca glomerata   4 4
No Yes Frankia sp. EAN1pec   6 6
No Yes Frankia alni ACN14a   7 5
No Yes Thermobifida fusca YX   1 1
No Yes Thermomonospora curvata DSM 43183   6 4
No Yes Streptosporangium roseum DSM 43021   8 6
No Yes Kitasatospora setae KM-6054   4 3
No Yes Streptomyces flavogriseus ATCC 33331   2 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   2 2
No Yes Streptomyces bingchenggensis BCW-1   5 4
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces scabiei 87.22   2 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   3 2
No Yes Actinosynnema mirum DSM 43827   2 2
No Yes Amycolatopsis mediterranei U32   2 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Micromonospora sp. L5   2 1
No Yes Micromonospora aurantiaca ATCC 27029   4 3
No Yes Actinoplanes sp. N902-109   3 2
No Yes Actinoplanes sp. SE50/110   3 3
No Yes Actinoplanes missouriensis 431   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Mycobacterium marinum M   2 1
No Yes Roseiflexus sp. RS-1   9 4
No Yes Chloroflexus sp. MS-G   5 3
No Yes Chloroflexus aggregans DSM 9485   3 2
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeobacteroides DSM 266   3 2
No Yes Chlorobium phaeovibrioides DSM 265   1 1
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   2 2
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   5 5
No Yes Prosthecochloris aestuarii DSM 271   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   13 7
No Yes Simkania negevensis Z   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Planctomyces limnophilus DSM 3776   2 2
No Yes Treponema primitia ZAS-2   2 1
No Yes Calditerrivibrio nitroreducens DSM 19672   1 1
No Yes Kosmotoga olearia TBF 19.5.1   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Desulfomonile tiedjei DSM 6799   1 1
No Yes Geobacter metallireducens GS-15   2 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   24 14
No Yes Sorangium cellulosum 'So ce 56'   14 8
No Yes Stigmatella aurantiaca DW4/3-1   2 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus xanthus DK 1622   3 2
No Yes Myxococcus fulvus HW-1   1 1
No Yes Dechloromonas aromatica RCB   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Azoarcus sp. KH32C   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   6 4
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Burkholderia sp. CCGE1002   2 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylomonas methanica MC09   2 2
No Yes Thiocystis violascens DSM 198   1 1
No Yes Methanocella paludicola SANAE   1 1
No Yes Methanosaeta harundinacea 6Ac   4 3
No Yes Methanosarcina acetivorans C2A   2 1
No Yes Methanosarcina barkeri str. Fusaro   3 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 117 117
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 47 45
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 29 28
No Yes Ascaris suum Victoria/Ghent Pig roundworm 19 18
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 23 21
No Yes Cryptococcus neoformans var. grubii H99   14 13
No Yes Cryptococcus neoformans B-3501A   11 11
No Yes Cryptococcus neoformans JEC21   9 9
No Yes Paracoccidioides brasiliensis Pb01   12 12
No Yes Paracoccidioides brasiliensis Pb03   13 13
No Yes Coccidioides posadasii str. Silveira   16 16
No Yes Coccidioides immitis RMSCC 3703   13 13
No Yes Coccidioides immitis RMSCC 2394   17 17
No Yes Coccidioides immitis H538.4   12 12
No Yes Ajellomyces dermatitidis ER-3   16 16
No Yes Histoplasma capsulatum H143   13 13
No Yes Histoplasma capsulatum H88   14 14
No Yes Histoplasma capsulatum G186AR   16 15
No Yes Aspergillus fumigatus A1163   19 18
No Yes Candida albicans WO-1   11 11
No Yes Saccharomyces cerevisiae UC5   11 10
No Yes Saccharomyces cerevisiae PW5   13 12
No Yes Saccharomyces cerevisiae FL100   6 6
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   7 7
No Yes Saccharomyces cerevisiae CBS7960   10 9
No Yes Saccharomyces cerevisiae YJM269   13 12
No Yes Saccharomyces cerevisiae T7   14 13
No Yes Saccharomyces cerevisiae FostersB   12 11
No Yes Saccharomyces cerevisiae FostersO   15 14
No Yes Saccharomyces cerevisiae VL3   15 14
No Yes Saccharomyces cerevisiae Vin13   13 12
No Yes Saccharomyces cerevisiae LalvinQA23   13 13
No Yes Saccharomyces cerevisiae AWRI796   15 14
No Yes Saccharomyces cerevisiae Sigma1278b   16 15
No Yes Saccharomyces cerevisiae W303   16 15
No Yes Saccharomyces cerevisiae JAY291   14 13
No Yes Saccharomyces cerevisiae AWRI1631   10 9
No Yes Saccharomyces cerevisiae YPS163   5 5
No Yes Saccharomyces cerevisiae M22   5 4
No Yes Saccharomyces cerevisiae T73   5 5
No Yes Saccharomyces cerevisiae CLIB215   11 10
No Yes Saccharomyces cerevisiae Y10   2 2
No Yes Saccharomyces cerevisiae YJM789   15 14
No Yes Saccharomyces cerevisiae YJM789   15 14
No Yes Saccharomyces cerevisiae RM11-1a   16 15
No Yes Saccharomyces cerevisiae RM11-1a   16 15
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 16 15
No Yes Schizosaccharomyces pombe 972h-   15 15
No Yes Batrachochytrium dendrobatidis JEL423   28 28
No Yes Batrachochytrium dendrobatidis JAM81   31 31
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 24 23
No Yes Hordeum vulgare 22 Domesticated barley 42 42
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 22 22
No Yes Trypanosoma brucei Lister 427 v4.1   8 8
No Yes Neospora caninum Nc-Liverpool 6.2   5 5
No Yes Plasmodium falciparum HB3   2 2
No Yes Chroococcidiopsis thermalis PCC 7203   20 15
No Yes Chamaesiphon minutus PCC 6605   21 16
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   3 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   3 2
No Yes Synechocystis sp. PCC 6803 substr. GT-I   3 2
No Yes Synechocystis sp. PCC 6803   4 3
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Crinalium epipsammum PCC 9333   24 18
No Yes Oscillatoria nigro-viridis PCC 7112   24 19
No Yes Oscillatoria acuminata PCC 6304   54 44
No Yes Arthrospira platensis NIES-39   27 21
No Yes Cyanothece sp. PCC 7822   29 21
No Yes Cyanothece sp. PCC 7425   7 5
No Yes Cyanothece sp. PCC 7424   22 15
No Yes Cyanothece sp. ATCC 51142   16 11
No Yes Cyanothece sp. PCC 8801   5 5
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   7 5
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   7 7
No Yes Stanieria cyanosphaera PCC 7437   13 9
No Yes Calothrix parietina Calothrix sp. PCC 6303   36 24
No Yes Cylindrospermum stagnale PCC 7417   29 19
No Yes Anabaena cylindrica PCC 7122   21 17
No Yes Frankia sp. EuI1c   11 9
No Yes Frankia sp. CcI3   3 3
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces collinus Tu 365   4 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   3 2
No Yes Amycolatopsis mediterranei RB   2 1
No Yes Amycolatopsis mediterranei S699   2 1
No Yes Amycolatopsis mediterranei S699   2 1
No Yes Amycolatopsis orientalis HCCB10007   2 2
No Yes Actinoplanes friuliensis DSM 7358   2 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Singulisphaera acidiphila DSM 18658   15 12
No Yes Sorangium cellulosum So0157-2   9 4
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   3 2
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Thioflavicoccus mobilis 8321   2 1
No Yes Homo sapiens 75_37 (old version GRC) Human 162 162
No Yes Homo sapiens (NCBI version) Human 67 67
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 43 43
No Yes Heliconius numata (Incomplete)   11 11
No Yes Loa loa v3.3 (Request) Eye worm 16 16
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 15 15
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 20 19
No Yes Moniliophthora perniciosa FA553 (Genome survey)   7 7
No Yes Encephalitozoon intestinalis (endoparasite)   2 2
No Yes Encephalitozoon cuniculi (endoparasite)   2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 2 2
No Yes Lotus japonicus (Early assembly)   11 11
No Yes Malus x domestica (Duplicate) Apple 36 36
No Yes Ricinus communis (Early assembly) Castor bean 24 23
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   36 36
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 25 25
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 25 25
No Yes Phoenix dactylifera (Early draft) Date palm 8 8
No Yes Homo sapiens 69_37 Human 46 46
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 38 38
No Yes Gorilla gorilla 69_3.1 Western gorilla 38 38
No Yes Pongo abelii 69_2 Sumatran orangutan 39 39
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 36 36
No Yes Macaca mulatta 69_1 Rhesus monkey 43 43
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 43 43
No Yes Otolemur garnettii 69_3 Small-eared galago 43 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 27 27
No Yes Rattus norvegicus 69_3.4 Norway rat 42 42
No Yes Mus musculus 69_38 House mouse 45 45
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 30 30
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 39 39
No Yes Cavia porcellus 69_3 Domestic guinea pig 39 39
No Yes Oryctolagus cuniculus 69_2 Rabbit 36 36
No Yes Ochotona princeps 69 American pika 28 28
No Yes Tupaia belangeri 69 Northern tree shrew 25 25
No Yes Sus scrofa 69_10.2 Pig 40 40
No Yes Bos taurus 69_3.1 Cattle 40 40
No Yes Vicugna pacos 69_1 Alpaca 20 20
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 35 35
No Yes Mustela putorius furo 69_1.0 Domestic ferret 44 44
No Yes Ailuropoda melanoleuca 69_1 Giant panda 42 42
No Yes Canis familiaris 69_3.1 Dog 47 47
No Yes Felis catus 69 Domestic cat 27 27
No Yes Equus caballus 69_2 Horse 41 41
No Yes Myotis lucifugus 69_2.0 Little brown bat 46 45
No Yes Pteropus vampyrus 69_1 Large flying fox 31 31
No Yes Sorex araneus 69_1 European shrew 18 18
No Yes Erinaceus europaeus 69 Western European hedgehog 19 18
No Yes Procavia capensis 69_1 Cape rock hyrax 28 28
No Yes Loxodonta africana 69_3 African savanna elephant 43 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 24 24
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 22 22
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 13 13
No Yes Macropus eugenii 69_1.0 Tammar wallaby 29 29
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 34 34
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 46 46
No Yes Ornithorhynchus anatinus 69_5 Platypus 33 33
No Yes Petromyzon marinus 69_7.0 Sea lamprey 22 21
No Yes Meleagris gallopavo 69_2 Turkey 36 36
No Yes Gallus gallus 69_2 Chicken 35 35
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 36 36
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 30 30
No Yes Anolis carolinensis 69_2.0 Green anole 33 33
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 46 46
No Yes Latimeria chalumnae 69_1 Coelacanth 42 42
No Yes Gadus morhua 69_1 Atlantic cod 38 38
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 39 39
No Yes Takifugu rubripes 69_4 Torafugu 46 45
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 40 40
No Yes Oryzias latipes 69_1 Japanese medaka 43 43
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 42 42
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 45 45
No Yes Danio rerio 69_9 Zebrafish 45 45
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 21 21
No Yes Ciona intestinalis 69 Vase tunicate 25 25
No Yes Drosophila melanogaster 69_5 Fruit fly 24 23
No Yes Caenorhabditis elegans 69_215 Roundworm 20 18
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 16 15
No Yes Arabidopsis thaliana 10 Thale cress 28 28
No Yes 2_050719S (meta-genome)   7 7
No Yes 3_050719R (meta-genome)   18 15
No Yes 4_050719Q (meta-genome)   26 26
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   38 37
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   4 4
No Yes Core Eukaryotic Genes 458 (CEGMA)   34 31
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   14 14
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   9 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   13 13
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   22 22
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   12 12
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   43366 40974
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   17 17
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   203 203
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   14 14
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   4 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   4 4
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   7 6
No Yes Sludge/US, Jazz Assembly (meta-genome)   6 4
No Yes Sludge/US, Phrap Assembly (meta-genome)   17 13
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   3 3
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   3296 3115
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   47209 43768
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   143 140
No Yes NCBI plasmid sequences (Plasmids)   84 51
No Yes PDB chains (SCOP 1.75) (PDB)   17 15
No Yes Protein Data Bank (all PDB sequenc)   246 241
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   702 702
No Yes TargetDB (Targets)   140 125

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