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Carbohydrate binding domain superfamily domain assignments
in
Coniophora puteana

Assignment details

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Coniophora puteana has 15 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Conpu1|114748|estExt_Genewise1Plus.C_1_t20499   0.000000000000719   416-464   Carbohydrate binding domain  
  0.000000000183   335-390   Carbohydrate binding domain  
jgi|Conpu1|146862|estExt_fgenesh1_pg.C_140269   0.00000000000719   137-187   Carbohydrate binding domain  
  0.00000000785   30-81   Carbohydrate binding domain  
jgi|Conpu1|147842|estExt_fgenesh1_pg.C_210055   0.000000000615   352-402   Carbohydrate binding domain  
jgi|Conpu1|149555|gm1.1546_g   0.00000000000562   170-220   Carbohydrate binding domain  
  0.000000017   30-81   Carbohydrate binding domain  
jgi|Conpu1|150653|gm1.2644_g   0.00000314   21-63   Carbohydrate binding domain  
jgi|Conpu1|158462|gm1.10453_g   0.00000981   38-81   Carbohydrate binding domain  
jgi|Conpu1|158485|gm1.10476_g   0.0000000000157   138-188   Carbohydrate binding domain  
  0.00000000785   30-81   Carbohydrate binding domain  
jgi|Conpu1|165887|estExt_Genemark1.C_7_t10202   0.000000000000175   373-421   Carbohydrate binding domain  
jgi|Conpu1|169400|estExt_Genemark1.C_160207   0.00000000000192   446-495   Carbohydrate binding domain  
jgi|Conpu1|72142|fgenesh1_pg.5_#_66   0.000000183   32-83   Carbohydrate binding domain  
jgi|Conpu1|81298|fgenesh1_kg.4_#_440_#_isotig00260   0.000000000000301   5-46   Carbohydrate binding domain  
 
Weak hits:
jgi|Conpu1|121455|estExt_Genewise1Plus.C_4_t20494   0.0471   26-61   Carbohydrate binding domain  
jgi|Conpu1|158489|gm1.10480_g   0.000373   31-76   Carbohydrate binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   78001 78001
No Yes Adineta vaga   8 8
No Yes Capitella sp. I   2 2
No Yes Mortierella verticillata NRRL 6337   10 7
No Yes Phycomyces blakesleeanus   1 1
No Yes Rhizopus oryzae RA 99-880   4 4
No Yes Mucor circinelloides   3 3
No Yes Rhizomucor miehei CAU432   4 2
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Sphaerobolus stellatus v1.0   5 4
No Yes Piloderma croceum F 1598 v1.0   4 3
No Yes Serpula lacrymans var. lacrymans S7.9   4 3
No Yes Coniophora puteana   15 11
No Yes Hydnomerulius pinastri v2.0   12 10
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   9 6
No Yes Pisolithus microcarpus 441 v1.0   4 4
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   2 2
No Yes Coprinopsis cinerea okayama7 130 v3   4 3
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0   6 5
No Yes Amanita muscaria Koide v1.0 Fly agaric 5 4
No Yes Galerina marginata v1.0   3 3
No Yes Hebeloma cylindrosporum h7 v2.0   3 2
No Yes Laccaria bicolor S238N-H82   3 2
No Yes Agaricus bisporus var. bisporus   4 4
No Yes Schizophyllum commune   4 4
No Yes Stereum hirsutum FP-91666 SS1 v1.0   11 10
No Yes Heterobasidion annosum   5 4
No Yes Gloeophyllum trabeumv1.0   5 4
No Yes Punctularia strigosozonata v1.0   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Fomitiporia mediterranea v1.0   6 5
No Yes Tulasnella calospora AL13/4D v1.0   3 3
No Yes Postia placenta   6 6
No Yes Wolfiporia cocos MD-104 SS10 v1.0   4 3
No Yes Fomitopsis pinicolav1.0   5 4
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   5 4
No Yes Phanerochaete chrysosporium RP-78 2.1   4 3
No Yes Dichomitus squalens   6 5
No Yes Trametes versicolor v1.0   7 6
No Yes Fusarium oxysporum f. sp. lycopersici 4286   4 2
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Spizellomyces punctatus DAOM BR117   2 2
No Yes Nostoc sp. PCC 7120   1 1
No Yes Conexibacter woesei DSM 14684   2 1
No Yes Acidimicrobium ferrooxidans DSM 10331   2 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 1
No Yes Acidothermus cellulolyticus 11B   2 2
No Yes Catenulispora acidiphila DSM 44928   8 7
No Yes Stackebrandtia nassauensis DSM 44728   3 3
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   4 4
No Yes Streptosporangium roseum DSM 43021   11 10
No Yes Kitasatospora setae KM-6054   12 12
No Yes Streptomyces coelicolor A3(2)   8 8
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   6 6
No Yes Streptomyces griseus subsp. griseus NBRC 13350   5 5
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Amycolatopsis mediterranei U32   6 6
No Yes Kribbella flavida DSM 17836   3 3
No Yes Salinispora arenicola CNS-205   4 3
No Yes Salinispora tropica CNB-440   4 3
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   4 3
No Yes Micromonospora aurantiaca ATCC 27029   4 3
No Yes Actinoplanes sp. N902-109   9 9
No Yes Actinoplanes sp. SE50/110   16 14
No Yes Actinoplanes missouriensis 431   10 10
No Yes Sanguibacter keddieii DSM 10542   2 2
No Yes Beutenbergia cavernae DSM 12333   2 1
No Yes Microbacterium testaceum StLB037   2 1
No Yes Jonesia denitrificans DSM 20603   1 1
No Yes Isoptericola variabilis 225   2 2
No Yes Xylanimonas cellulosilytica DSM 15894   8 4
No Yes Arthrobacter aurescens TC1   2 1
No Yes Arthrobacter sp. Rue61a   2 1
No Yes Bifidobacterium breve ACS-071-V-Sch8b   1 1
No Yes Herpetosiphon aurantiacus DSM 785   10 7
No Yes Desulfosporosinus acidiphilus SJ4   3 1
No Yes Desulfitobacterium hafniense Y51   5 1
No Yes Clostridium phytofermentans ISDg   3 3
No Yes Clostridium lentocellum DSM 5427   2 1
No Yes Clostridium beijerinckii NCIMB 8052   6 4
No Yes Clostridium botulinum A str. ATCC 3502   5 4
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Enterococcus hirae ATCC 9790   3 3
No Yes Lactococcus garvieae ATCC 49156   1 1
No Yes Lactococcus lactis subsp. cremoris MG1363   1 1
No Yes Brevibacillus brevis NBRC 100599   4 3
No Yes Paenibacillus sp. JDR-2   4 2
No Yes Paenibacillus mucilaginosus 3016   3 3
No Yes Listeria welshimeri serovar 6b str. SLCC5334   3 2
No Yes Listeria innocua Clip11262   3 2
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   3 2
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   2 2
No Yes Bacillus weihenstephanensis KBAB4   6 6
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Bacillus clausii KSM-K16   4 3
No Yes Bacillus cellulosilyticus DSM 2522   5 3
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   4 3
No Yes Gramella forsetii KT0803   3 1
No Yes Zobellia galactanivorans   2 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Spirochaeta thermophila DSM 6192   2 1
No Yes Granulicella mallensis MP5ACTX8   2 2
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   3 2
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   2 1
No Yes Stigmatella aurantiaca DW4/3-1   6 6
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   1 1
No Yes Chromobacterium violaceum ATCC 12472   10 9
No Yes Burkholderia rhizoxinica HKI 454   2 2
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   2 1
No Yes Burkholderia pseudomallei 1106a   2 1
No Yes Burkholderia mallei SAVP1   2 1
No Yes Burkholderia ambifaria AMMD   3 2
No Yes Burkholderia cenocepacia HI2424   2 1
No Yes Burkholderia gladioli BSR3   3 3
No Yes Polaromonas sp. JS666   1 1
No Yes Collimonas fungivorans Ter331   2 2
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Rhodospirillum rubrum F11   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Azorhizobium caulinodans ORS 571   1 1
No Yes Saccharophagus degradans 2-40   4 4
No Yes Teredinibacter turnerae T7901   14 13
No Yes Cellvibrio japonicus Ueda107   5 5
No Yes Aeromonas veronii B565   10 7
No Yes Aeromonas salmonicida subsp. salmonicida A449   3 3
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   5 4
No Yes Aliivibrio salmonicida LFI1238   3 3
No Yes Vibrio fischeri MJ11   12 10
No Yes Vibrio sp. Ex25   9 7
No Yes Vibrio harveyi ATCC BAA-1116   14 11
No Yes Vibrio parahaemolyticus RIMD 2210633   9 7
No Yes Vibrio splendidus LGP32   5 4
No Yes Vibrio anguillarum 775   6 6
No Yes Vibrio furnissii NCTC 11218   4 4
No Yes Vibrio vulnificus MO6-24/O   9 8
No Yes Vibrio cholerae O395   8 7
No Yes Photobacterium profundum SS9   9 7
No Yes Ferrimonas balearica DSM 9799   4 2
No Yes Shewanella piezotolerans WP3   2 1
No Yes Shewanella halifaxensis HAW-EB4   2 2
No Yes Shewanella denitrificans OS217   2 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   2 2
No Yes Shewanella baltica OS185   5 3
No Yes Shewanella woodyi ATCC 51908   9 5
No Yes Shewanella sp. MR-4   2 1
No Yes Shewanella violacea DSS12   8 5
No Yes Pseudoalteromonas sp. SM9913   6 3
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Hahella chejuensis KCTC 2396   10 7
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Rahnella sp. Y9602   6 5
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   6 5
No Yes Yersinia pseudotuberculosis IP 31758   3 3
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   2 2
No Yes Serratia sp. AS12   4 4
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   4 4
No Yes Serratia proteamaculans 568   3 3
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium sp. SCC3193   4 2
No Yes Sodalis glossinidius str. 'morsitans'   2 2
No Yes Pantoea sp. At-9b   3 2
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   2 2
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter asburiae LF7a   2 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   2 1
No Yes Citrobacter rodentium ICC168   7 6
No Yes Citrobacter koseri ATCC BAA-895   2 1
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Francisella noatunensis subsp. orientalis str. Toba 04   1 1
No Yes Francisella sp. TX077308   13 8
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   8 6
No Yes Francisella tularensis subsp. tularensis WY96-3418   3 2
No Yes Francisella cf. novicida 3523   4 2
No Yes Francisella novicida U112   4 2
No Yes Methanoregula boonei 6A8   1 1
No Yes Methanoplanus petrolearius DSM 11571   4 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   11 6
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Natrinema sp. J7-2   5 5
No Yes Halogeometricum borinquense DSM 11551   5 5
No Yes Haloferax mediterranei ATCC 33500   5 5
No Yes Halomicrobium mukohataei DSM 12286   21 11
No Yes Halorhabdus utahensis DSM 12940   1 1
No Yes Halobacterium salinarum R1   3 3
No Yes Halobacterium sp. NRC-1   3 3
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Frankia sp. EuI1c   2 1
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces davawensis JCM 4913   6 6
No Yes Streptomyces fulvissimus DSM 40593   5 5
No Yes Streptomyces venezuelae ATCC 10712   5 5
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   11 11
No Yes Amycolatopsis mediterranei RB   6 6
No Yes Amycolatopsis mediterranei S699   6 6
No Yes Amycolatopsis mediterranei S699   6 6
No Yes Amycolatopsis orientalis HCCB10007   7 7
No Yes Propionibacterium acidipropionici ATCC 4875   2 1
No Yes Actinoplanes friuliensis DSM 7358   14 12
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Bifidobacterium thermophilum RBL67   1 1
No Yes Bifidobacterium breve UCC2003   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium botulinum H04402 065   5 4
No Yes Clostridium botulinum F str. 230613   4 3
No Yes Clostridium botulinum F str. Langeland   5 4
No Yes Clostridium botulinum B1 str. Okra   5 4
No Yes Clostridium botulinum Ba4 str. 657   5 4
No Yes Clostridium botulinum A2 str. Kyoto   5 4
No Yes Clostridium botulinum A3 str. Loch Maree   5 4
No Yes Clostridium botulinum A str. Hall   5 4
No Yes Clostridium botulinum A str. ATCC 19397   5 4
No Yes Carnobacterium maltaromaticum LMA28   5 4
No Yes Enterococcus mundtii QU 25   11 9
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Lactococcus garvieae Lg2   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis IO-1   1 1
No Yes Lactococcus lactis subsp. lactis CV56   1 1
No Yes Lactococcus lactis subsp. lactis KF147   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   3 2
No Yes Lactococcus lactis subsp. cremoris NZ9000   1 1
No Yes Lactococcus lactis subsp. cremoris SK11   1 1
No Yes Paenibacillus sp. Y412MC10   5 5
No Yes Paenibacillus mucilaginosus KNP414   4 4
No Yes Paenibacillus mucilaginosus K02   4 4
No Yes Paenibacillus larvae subsp. larvae DSM 25430   3 2
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Listeria monocytogenes EGD sequence   3 2
No Yes Listeria monocytogenes N53-1   3 2
No Yes Listeria monocytogenes La111   3 2
No Yes Listeria monocytogenes serotype 4b str. LL195   3 2
No Yes Listeria monocytogenes 07PF0776   3 2
No Yes Listeria monocytogenes M7   3 2
No Yes Listeria monocytogenes J1-220   3 2
No Yes Listeria monocytogenes J1816   3 2
No Yes Listeria monocytogenes SLCC2376   3 2
No Yes Listeria monocytogenes SLCC5850   3 2
No Yes Listeria monocytogenes ATCC 19117   3 2
No Yes Listeria monocytogenes L312   3 2
No Yes Listeria monocytogenes SLCC2479   3 2
No Yes Listeria monocytogenes SLCC7179   3 2
No Yes Listeria monocytogenes SLCC2540   3 2
No Yes Listeria monocytogenes SLCC2378   3 2
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   3 2
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   3 2
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   3 2
No Yes Listeria monocytogenes 08-5578   3 2
No Yes Listeria monocytogenes 08-5923   3 2
No Yes Listeria monocytogenes L99   3 2
No Yes Listeria monocytogenes HCC23   3 2
No Yes Listeria monocytogenes 10403S   3 2
No Yes Listeria monocytogenes J0161   3 2
No Yes Listeria monocytogenes Finland 1998   3 2
No Yes Listeria monocytogenes FSL R2-561   3 2
No Yes Listeria monocytogenes serotype 4b str. F2365   3 2
No Yes Listeria monocytogenes EGD-e   3 2
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   2 2
No Yes Bacillus thuringiensis HD-789   2 2
No Yes Bacillus thuringiensis MC28   8 8
No Yes Bacillus thuringiensis serovar chinensis CT-43   3 3
No Yes Bacillus thuringiensis YBT-1518   3 3
No Yes Bacillus thuringiensis Bt407   3 3
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   3 3
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   2 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   3 3
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   2 2
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   2 2
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   2 2
No Yes Bacillus cereus E33L   2 2
No Yes Bacillus cereus ATCC 14579   2 2
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   3 3
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia sp. YI23   3 2
No Yes Burkholderia thailandensis MSMB121   2 1
No Yes Burkholderia pseudomallei MSHR305   2 1
No Yes Burkholderia pseudomallei NCTC 13179   2 1
No Yes Burkholderia pseudomallei BPC006   2 1
No Yes Burkholderia pseudomallei 1026b   2 1
No Yes Burkholderia pseudomallei MSHR346   2 1
No Yes Burkholderia pseudomallei 668   2 1
No Yes Burkholderia pseudomallei 1710b   2 1
No Yes Burkholderia pseudomallei K96243   2 1
No Yes Burkholderia mallei NCTC 10229   2 1
No Yes Burkholderia mallei NCTC 10247   2 1
No Yes Burkholderia mallei ATCC 23344   2 1
No Yes Burkholderia lata   2 1
No Yes Burkholderia ambifaria MC40-6   2 1
No Yes Burkholderia cenocepacia MC0-3   2 1
No Yes Burkholderia cenocepacia AU 1054   2 1
No Yes Burkholderia cenocepacia J2315   2 1
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   8 6
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Haemophilus influenzae F3047   1 1
No Yes Haemophilus influenzae F3031   1 1
No Yes Aeromonas hydrophila ML09-119   5 4
No Yes Vibrio fischeri ES114   11 9
No Yes Vibrio sp. EJY3   3 2
No Yes Vibrio parahaemolyticus BB22OP   9 7
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   9 7
No Yes Vibrio anguillarum Listonella anguillarum M3   6 6
No Yes Vibrio nigripulchritudo VibrioScope   19 17
No Yes Vibrio vulnificus CMCP6   9 8
No Yes Vibrio vulnificus YJ016   9 8
No Yes Vibrio cholerae LMA3984-4   8 7
No Yes Vibrio cholerae M66-2   8 7
No Yes Vibrio cholerae O395   8 7
No Yes Vibrio cholerae IEC224   8 7
No Yes Vibrio cholerae O1 str. 2010EL-1786   8 7
No Yes Vibrio cholerae MJ-1236   8 7
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   8 7
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   2 1
No Yes Shewanella baltica BA175   5 3
No Yes Shewanella baltica OS678   5 3
No Yes Shewanella baltica OS117   5 3
No Yes Shewanella baltica OS223   6 4
No Yes Shewanella baltica OS195   5 3
No Yes Shewanella baltica OS155   5 3
No Yes Shewanella sp. MR-7   2 1
No Yes Rahnella aquatilis HX2   6 5
No Yes Yersinia pseudotuberculosis PB1/+   3 3
No Yes Yersinia pseudotuberculosis YPIII   3 3
No Yes Yersinia pseudotuberculosis IP 32953   3 3
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Serratia sp. AS13   4 4
No Yes Serratia plymuthica S13   2 2
No Yes Serratia plymuthica 4Rx13   4 4
No Yes Serratia marcescens WW4   2 2
No Yes Serratia liquefaciens ATCC 27592   2 2
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Klebsiella oxytoca KCTC 1686   2 2
No Yes Enterobacter aerogenes EA1509E   2 2
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   2 1
No Yes Enterobacter cloacae EcWSU1   2 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   2 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   2 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   2 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   3 2
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter baumannii AYE   1 1
No Yes Francisella noatunensis subsp. orientalis LADL--07-285A   1 1
No Yes Francisella tularensis subsp. mediasiatica FSC147   2 1
No Yes Francisella tularensis subsp. holarctica F92   2 1
No Yes Francisella tularensis subsp. holarctica FTNF002-00   2 1
No Yes Francisella tularensis subsp. holarctica OSU18   4 2
No Yes Francisella tularensis subsp. holarctica LVS   4 2
No Yes Francisella tularensis subsp. holarctica FSC200   4 2
No Yes Francisella tularensis subsp. tularensis TIGB03   3 2
No Yes Francisella tularensis subsp. tularensis TI0902   3 2
No Yes Francisella tularensis subsp. tularensis NE061598   4 3
No Yes Francisella tularensis subsp. tularensis FSC198   4 3
No Yes Francisella tularensis subsp. tularensis SCHU S4   3 2
No Yes Francisella cf. novicida Fx1   4 2
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Moniliophthora perniciosa FA553 (Genome survey)   4 4
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   14 12
No Yes 1_050719N (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   2 1
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   10 8
No Yes Combined (meta-genome)   12 11
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   16 14
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   2 2
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   30 26
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   14 12
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   23 19
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   24 21
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   2 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   3 3
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   3 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   60268 50044
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   6 5
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   4 2
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   5 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   3 3
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   6 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   13 12
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   4 4
No Yes STRING v9.0.5 (STRING)   625 494
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   4 4
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   3 3
No Yes Uniprot 2018_03 genome   13526 11078
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   415 258
No Yes NCBI plasmid sequences (Plasmids)   40 38
No Yes NCBI viral sequences (Viral)   9 8
No Yes PDB chains (SCOP 1.75) (PDB)   9 9
No Yes Protein Data Bank (all PDB sequenc)   107 88
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   188 188
No Yes TargetDB (Targets)   28 24
No Yes The Salmonella enterica Pan-genome (meta-genome)   26 26
No Yes UniProt viral sequences (Viral)   4 4

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