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Carbonic anhydrase family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 26 significant domains in 26 proteins.

Showing genomes 1 to 25 of 338
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Leptolyngbya sp. PCC 7376 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|427725931|ref|YP_007073208.1|   2.62e-55   0.00000821   222-432   1koq A:  

Acaryochloris marina MBIC11017 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|158333321|ref|YP_001514493.1|   9.68e-73   0.0000032   11-227   1koq A:  

Synechococcus elongatus PCC 7942 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|81300197|ref|YP_400405.1|   1.44e-58   0.0000318   29-236   1koq A:  

Geitlerinema sp. PCC 7407 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|428225683|ref|YP_007109780.1|   1.83e-60   0.00000681   38-248   1koq A:  

Cyanothece sp. PCC 8802 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|257058884|ref|YP_003136772.1|   3.66e-55   0.0000252   126-352   1hcb A:  
gi|257060747|ref|YP_003138635.1|   2.75e-72   0.00000407   37-253   1koq A:  

Microcystis aeruginosa NIES-843 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|166364172|ref|YP_001656445.1|   1.31e-63   0.00000591   24-240   1koq A:  

Rivularia sp. PCC 7116 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|427739085|ref|YP_007058629.1|   3.01e-77   0.000000859   39-257   1koq A:  

Anabaena variabilis ATCC 29413 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|75907196|ref|YP_321492.1|   2.97e-74   0.00000404   36-261   1koq A:  

Nostoc sp. PCC 7107 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|427708495|ref|YP_007050872.1|   1.7e-73   0.00000349   36-261   1koq A:  

Nostoc sp. PCC 7120 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|17230421|ref|NP_486969.1|   2.38e-73   0.00000462   36-261   1koq A:  

Nostoc sp. PCC 7524 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|427730048|ref|YP_007076285.1|   1.96e-72   0.00000292   36-254   1koq A:  

Nocardioides sp. JS614 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|119714625|ref|YP_921590.1|   2.49e-59   0.000013   48-256   1koq A:  

Carnobacterium sp. 17-4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|328957542|ref|YP_004374928.1|   4.97e-49   0.0000443   9-238   1koq A:  

Carnobacterium sp. WN1359 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|554649429|ref|YP_008718445.1|   9.42e-52   0.0000313   1-225   1koq A:  

Tetragenococcus halophilus NBRC 12172 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|352517564|ref|YP_004886881.1|   3.53e-51   0.0000633   5-221   1koq A:  

Enterococcus sp. 7L76 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|479180281|ref|YP_007807590.1|   1.44e-56   0.0000416   9-228   1koq A:  

Enterococcus faecium Aus0004 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|383328279|ref|YP_005354163.1|   2.75e-53   0.0000734   7-228   1koq A:  

Enterococcus faecalis 62 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|384518737|ref|YP_005706042.1|   1.44e-56   0.0000416   9-228   1koq A:  

Oenococcus oeni PSU-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|116490343|ref|YP_809887.1|   1.7e-56   0.0000312   5-206   1koq A:  

Lactobacillus plantarum JDM1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|254557360|ref|YP_003063777.1|   5.37e-56   0.0000911   3-207   1koq A:  

Pediococcus claussenii ATCC BAA-344 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|377808955|ref|YP_005004176.1|   7.07e-42   0.0001   12-209   1koq A:  

Pediococcus pentosaceus ATCC 25745 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|116492426|ref|YP_804161.1|   6.67e-45   0.0000633   8-207   1koq A:  

Streptococcus infantarius subsp. infantarius CJ18 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|379705977|ref|YP_005204436.1|   2.09e-45   0.0000184   2-138   1koq A:  

Streptococcus mutans NN2025 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|290580044|ref|YP_003484436.1|   9.42e-74   0.000000317   35-254   1koq A:  

Streptococcus thermophilus LMD-9 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|116628347|ref|YP_820966.1|   3.66e-74   0.000000714   39-258   1koq A:  

  1 2 3 4 5 6 7 8 9 10 11   Next Last
Showing genomes 1 to 25 of 338

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Select to display   Genome       Domains   Proteins
No Yes ALL   43731 43731
No Yes Homo sapiens 76_38 Human 56 56
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 18 18
No Yes Gorilla gorilla 76_3.1 Western gorilla 25 25
No Yes Pongo abelii 76_2 Sumatran orangutan 20 20
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 17 17
No Yes Papio anubis 76 Olive baboon 15 15
No Yes Macaca mulatta 76_1 Rhesus monkey 25 25
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 29 29
No Yes Otolemur garnettii 76_3 Small-eared galago 16 16
No Yes Microcebus murinus 76_1 Gray mouse lemur 17 16
No Yes Rattus norvegicus 76_5.0 Norway rat 18 18
No Yes Mus musculus 76_38 House mouse 31 31
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 16 16
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 17 17
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 16 16
No Yes Cavia porcellus 76_3 Domestic guinea pig 15 15
No Yes Oryctolagus cuniculus 76_2 Rabbit 18 18
No Yes Ochotona princeps 76 American pika 14 14
No Yes Tupaia belangeri 76 Northern tree shrew 15 15
No Yes Sus scrofa 76_10.2 Pig 18 18
No Yes Bos taurus 76_3.1 Cattle 20 20
No Yes Ovis aries 76_3.1 Sheep 19 19
No Yes Vicugna pacos 76_1 Alpaca 13 12
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 16 16
No Yes Mustela putorius furo 76_1.0 Domestic ferret 19 19
No Yes Ailuropoda melanoleuca 76_1 Giant panda 19 19
No Yes Canis familiaris 76_3.1 Dog 27 27
No Yes Felis catus 76_6.2 Domestic cat 18 18
No Yes Equus caballus 76_2 Horse 21 21
No Yes Myotis lucifugus 76_2.0 Little brown bat 15 15
No Yes Pteropus vampyrus 76_1 Large flying fox 14 14
No Yes Sorex araneus 76_1 European shrew 13 13
No Yes Erinaceus europaeus 76 Western European hedgehog 14 14
No Yes Procavia capensis 76_1 Cape rock hyrax 13 12
No Yes Loxodonta africana 76_3 African savanna elephant 20 20
No Yes Echinops telfairi 76 Small Madagascar hedgehog 14 14
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 21 21
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 9 7
No Yes Macropus eugenii 76_1.0 Tammar wallaby 12 12
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 19 19
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 21 21
No Yes Ornithorhynchus anatinus 76_5 Platypus 15 15
No Yes Saccoglossus kowalevskii v3.0   16 16
No Yes Petromyzon marinus 76_7.0 Sea lamprey 8 8
No Yes Meleagris gallopavo 76_2 Turkey 17 17
No Yes Gallus gallus 76_4 Chicken 16 16
No Yes Anas platyrhynchos 76_1.0 Mallard 14 14
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 17 17
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 16 16
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 22 22
No Yes Anolis carolinensis 76_2.0 Green anole 16 16
No Yes Xenopus laevis African clawed frog 23 23
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 22 22
No Yes Latimeria chalumnae 76_1 Coelacanth 17 17
No Yes Lepisosteus oculatus 76 Spotted gar 23 23
No Yes Gadus morhua 76_1 Atlantic cod 21 20
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 29 29
No Yes Takifugu rubripes 76_4 Torafugu 95 95
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 32 31
No Yes Oryzias latipes 76_1 Japanese medaka 18 18
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 17 17
No Yes Poecilia formosa 76 Amazon molly 20 19
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 28 28
No Yes Astyanax mexicanus 76 Mexican tetra 18 16
No Yes Danio rerio 76_9 Zebrafish 38 38
No Yes Oikopleura dioica   10 10
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 10 9
No Yes Ciona intestinalis 76 Vase tunicate 4 4
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 11 10
No Yes Adineta vaga   26 25
No Yes Octopus bimaculoides 280   10 10
No Yes Crassostrea gigas 22 Pacific oyster 19 17
No Yes Lottia gigantea Owl limpet 14 14
No Yes Helobdella robusta   13 13
No Yes Capitella sp. I   13 12
No Yes Danaus plexippus OGS1.0 Monarch butterfly 8 8
No Yes Heliconius melpomene Postman butterfly 5 5
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 9 9
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 40 40
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 8 8
No Yes Linepithema humile v1.1 Argentine ant 6 6
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 6 6
No Yes Solenopsis invicta v.2.2.3 Red fire ant 6 6
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 7 7
No Yes Atta cephalotes v1.1   9 9
No Yes Camponotus floridanus v3.3 Florida carpenter ant 9 9
No Yes Lucilia cuprina Australian sheep blowfly 12 10
No Yes Drosophila grimshawi 1.3   19 18
No Yes Drosophila willistoni 1.3   12 12
No Yes Drosophila pseudoobscura 2.13   14 14
No Yes Drosophila persimilis 1.3   13 13
No Yes Drosophila suzukii   15 11
No Yes Drosophila yakuba 1.3   13 13
No Yes Drosophila simulans 1.3   14 14
No Yes Drosophila sechellia 1.3   13 13
No Yes Drosophila melanogaster 76_5 Fruit fly 20 20
No Yes Drosophila erecta 1.3   13 12
No Yes Drosophila ananassae 1.3   14 14
No Yes Drosophila virilis 1.2   13 13
No Yes Drosophila mojavensis 1.3   13 13
No Yes Megaselia scalaris 22   5 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 14 14
No Yes Culex pipiens quinquefasciatus Southern house mosquito 12 12
No Yes Anopheles darlingi 22 American malaria mosquito 7 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 11 11
No Yes Tribolium castaneum 3.0 Red flour beetle 7 7
No Yes Pediculus humanus corporis (Early assembly) Human body louse 8 8
No Yes Acyrthosiphon pisum Pea aphid 4 4
No Yes Rhodnius prolixus 22   3 3
No Yes Daphnia pulex Common water flea 23 22
No Yes Strigamia maritima 22   10 9
No Yes Sarcoptes scabiei   8 8
No Yes Tetranychus urticae Two-spotted spider mite 8 8
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 4
No Yes Pristionchus pacificus   7 7
No Yes Meloidogyne incognita Southern root-knot nematode 8 8
No Yes Meloidogyne hapla   7 7
No Yes Onchocerca volvulus 22   6 6
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 5 5
No Yes Caenorhabditis japonica   6 6
No Yes Caenorhabditis brenneri   7 7
No Yes Caenorhabditis remanei   5 5
No Yes Caenorhabditis elegans 76_235 Roundworm 7 7
No Yes Caenorhabditis briggsae 2   6 6
No Yes Trichinella spiralis 22   4 4
No Yes Hymenolepis microstoma   5 5
No Yes Echinococcus multilocularis   4 4
No Yes Echinococcus granulosus   4 4
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   5 5
No Yes Mnemiopsis leidyi Sea walnut 3 3
No Yes Thelohanellus kitauei   3 3
No Yes Acropora digitifera v1.0   9 9
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 6
No Yes Hydra vulgaris   12 12
No Yes Amphimedon queenslandica   5 5
No Yes Trichoplax adhaerens   8 8
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Laccaria bicolor S238N-H82   6 6
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   2 2
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   2 2
No Yes Trichophyton tonsurans CBS 112818   2 2
No Yes Trichophyton rubrum CBS 118892   2 2
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus terreus NIH2624   2 2
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Penicillium marneffei ATCC 18224   2 2
No Yes Tuber melanosporum Mel28 22   2 2
No Yes Tuber melanosporum Vittad Perigord truffle 2 2
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Selaginella moellendorffii   13 13
No Yes Pinus taeda Loblolly pine 6 5
No Yes Picea abies Norway spruce 9 9
No Yes Eucalyptus grandis v201 Rose gum 15 15
No Yes Theobroma cacao B97-61/B2 v1 Cacao 5 5
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   5 5
No Yes Citrus sinensis v154 Sweet orange 5 5
No Yes Thellungiella halophila v173   10 10
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 9 9
No Yes Capsella rubella v183   11 11
No Yes Arabidopsis lyrata Lyrate rockcress 8 8
No Yes Arabidopsis thaliana 10 Thale cress 9 9
No Yes Carica papaya Papaya 6 6
No Yes Medicago truncatula Barrel medic 9 9
No Yes Phaseolus vulgaris v186 French bean 8 8
No Yes Glycine max v109 Soybean 14 14
No Yes Cucumis sativus v122 Cucumber 11 11
No Yes Fragaria vesca Wild strawberry 10 10
No Yes Malus domestica v196 Apple 7 7
No Yes Prunus persica v139 Peach 9 9
No Yes Linum usitatissimum v200 Flax 15 15
No Yes Manihot esculenta v147 Cassava 6 6
No Yes Populus trichocarpa v156 Black cottonwood 8 8
No Yes Vitis vinifera Wine grape 5 5
No Yes Mimulus guttatus v140 Spotted monkey flower 8 8
No Yes Solanum lycopersicum v.2.3 Tomato 8 8
No Yes Solanum tuberosum Potato 6 6
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   11 11
No Yes Triticum aestivum 22 Bread wheat 20 20
No Yes Aegilops tauschii 22   11 11
No Yes Brachypodium distachyon Stiff brome 7 7
No Yes Oryza barthii 22 African wild rice 13 12
No Yes Oryza meridionalis 22   10 10
No Yes Oryza glumaepatula 22   9 8
No Yes Oryza glaberrima African rice 7 7
No Yes Oryza punctata 22   12 12
No Yes Oryza nivara 22   12 11
No Yes Oryza brachyantha 22 Malo sina 9 9
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 11 11
No Yes Oryza sativa v193 Rice 11 11
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 5 5
No Yes Panicum virgatum v202 Switchgrass 12 12
No Yes Setaria italica v164 Foxtail millet 10 10
No Yes Zea mays subsp. mays Maize 13 13
No Yes Zea mays v181 Maize 16 16
No Yes Sorghum bicolor Sorghum 8 8
No Yes Musa balbisiana Balbis banana 9 9
No Yes Musa acuminata 22 Wild Malaysian banana 10 10
No Yes Amborella trichopoda 22   5 5
No Yes Physcomitrella patens   3 3
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Porphyridium purpureum 02_2012   2 2
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   5 5
No Yes Ectocarpus siliculosus   1 1
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   3 3
No Yes Pythium ultimum v1.7-2   4 4
No Yes Pythium aphanidermatum DAOM BR444 22   2 2
No Yes Pythium irregulare DAOM BR486 22   3 3
No Yes Pythium vexans DAOM BR484 22   3 3
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 9 9
No Yes Phytophthora sojae 1.1   9 9
No Yes Phytophthora infestans T30-4   6 6
No Yes Phytophthora capsici   8 8
No Yes Hyaloperonospora arabidopsidis 22   2 2
No Yes Perkinsus marinus ATCC 50983   7 7
No Yes Paramecium tetraurelia   3 3
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Guillardia theta CCMP2712 v1.0   5 5
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   2 2
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Nocardioides sp. JS614   1 1
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Tetragenococcus halophilus NBRC 12172   1 1
No Yes Enterococcus sp. 7L76   1 1
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Oenococcus oeni PSU-1   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Pediococcus claussenii ATCC BAA-344   1 1
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   1 1
No Yes Streptococcus mutans NN2025   1 1
No Yes Streptococcus thermophilus LMD-9   1 1
No Yes Streptococcus salivarius 57.I   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Saprospira grandis str. Lewin   1 1
No Yes Fibrella aestuarina   1 1
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Thermovibrio ammonificans HB-1   1 1
No Yes Sulfurihydrogenibium sp. YO3AOP1   1 1
No Yes Sulfurihydrogenibium azorense Az-Fu1   1 1
No Yes Persephonella marina EX-H1   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Arcobacter nitrofigilis DSM 7299   1 1
No Yes Campylobacter lari RM2100   1 1
No Yes Sulfurimonas denitrificans DSM 1251   1 1
No Yes Helicobacter cetorum MIT 00-7128   1 1
No Yes Helicobacter bizzozeronii CIII-1   1 1
No Yes Helicobacter hepaticus ATCC 51449   1 1
No Yes Helicobacter mustelae 12198   1 1
No Yes Helicobacter felis ATCC 49179   1 1
No Yes Helicobacter acinonychis str. Sheeba   1 1
No Yes Helicobacter pylori B38   1 1
No Yes Nitratiruptor sp. SB155-2   1 1
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Dechloromonas aromatica RCB   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Azoarcus sp. KH32C   2 2
No Yes Azoarcus sp. BH72   1 1
No Yes Dechlorosoma suillum PS   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   2 2
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   1 1
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Thiobacillus denitrificans ATCC 25259   1 1
No Yes Nitrosospira multiformis ATCC 25196   2 2
No Yes Nitrosomonas sp. Is79A3   2 2
No Yes Nitrosomonas eutropha C91   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Methylotenera versatilis 301   1 1
No Yes Methylotenera mobilis JLW8   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Rhodospirillum centenum SW   1 1
No Yes Rhodospirillum rubrum F11   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   3 3
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocella silvestris BL2   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Pasteurella multocida subsp. multocida str. 3480   1 1
No Yes Haemophilus parainfluenzae T3T1   1 1
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   2 2
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   2 2
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Psychromonas ingrahamii 37   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Methylococcus capsulatus str. Bath   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Thiocystis violascens DSM 198   2 2
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Thiomicrospira crunogena XCL-2   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 38 38
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 14 14
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 12 12
No Yes Ascaris suum Victoria/Ghent Pig roundworm 6 6
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 7 7
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 15 15
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 11 11
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Cyanothece sp. PCC 7822   4 4
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   2 2
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Carnobacterium maltaromaticum LMA28   2 2
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecium NRRL B-2354   1 1
No Yes Enterococcus faecium DO   1 1
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Streptococcus mutans GS-5   1 1
No Yes Streptococcus mutans LJ23   1 1
No Yes Streptococcus mutans UA159   1 1
No Yes Streptococcus thermophilus MN-ZLW-002   1 1
No Yes Streptococcus thermophilus JIM 8232   1 1
No Yes Streptococcus thermophilus ND03   1 1
No Yes Streptococcus thermophilus CNRZ1066   1 1
No Yes Streptococcus thermophilus LMG 18311   1 1
No Yes Streptococcus salivarius CCHSS3   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   1 1
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   1 1
No Yes Listeria monocytogenes 08-5923   1 1
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   1 1
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Helicobacter cetorum MIT 99-5656   1 1
No Yes Helicobacter pylori BM012S   1 1
No Yes Helicobacter pylori BM012A   1 1
No Yes Helicobacter pylori SouthAfrica20   1 1
No Yes Helicobacter pylori UM298   1 1
No Yes Helicobacter pylori UM066   1 1
No Yes Helicobacter pylori UM037   1 1
No Yes Helicobacter pylori UM299   1 1
No Yes Helicobacter pylori UM032   1 1
No Yes Helicobacter pylori OK310   1 1
No Yes Helicobacter pylori OK113   1 1
No Yes Helicobacter pylori Rif2   1 1
No Yes Helicobacter pylori Rif1   1 1
No Yes Helicobacter pylori HUP-B14   1 1
No Yes Helicobacter pylori PeCan18   1 1
No Yes Helicobacter pylori Shi169   1 1
No Yes Helicobacter pylori Shi112   1 1
No Yes Helicobacter pylori Shi417   1 1
No Yes Helicobacter pylori XZ274   1 1
No Yes Helicobacter pylori Aklavik86   1 1
No Yes Helicobacter pylori Aklavik117   1 1
No Yes Helicobacter pylori SNT49   1 1
No Yes Helicobacter pylori Puno135   1 1
No Yes Helicobacter pylori Puno120   1 1
No Yes Helicobacter pylori ELS37   1 1
No Yes Helicobacter pylori Gambia94/24   1 1
No Yes Helicobacter pylori SouthAfrica7   1 1
No Yes Helicobacter pylori India7   1 1
No Yes Helicobacter pylori Lithuania75   1 1
No Yes Helicobacter pylori 2017   1 1
No Yes Helicobacter pylori 2018   1 1
No Yes Helicobacter pylori 908   1 1
No Yes Helicobacter pylori F57   1 1
No Yes Helicobacter pylori F30   1 1
No Yes Helicobacter pylori F16   1 1
No Yes Helicobacter pylori Sat464   1 1
No Yes Helicobacter pylori Cuz20   1 1
No Yes Helicobacter pylori PeCan4   1 1
No Yes Helicobacter pylori SJM180   1 1
No Yes Helicobacter pylori B8   1 1
No Yes Helicobacter pylori 52   1 1
No Yes Helicobacter pylori v225d   1 1
No Yes Helicobacter pylori 83   1 1
No Yes Helicobacter pylori 35A   1 1
No Yes Helicobacter pylori P12   1 1
No Yes Helicobacter pylori G27   1 1
No Yes Helicobacter pylori Shi470   1 1
No Yes Helicobacter pylori HPAG1   1 1
No Yes Helicobacter pylori 51   1 1
No Yes Helicobacter pylori F32   1 1
No Yes Helicobacter pylori J99   1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti GR4   2 2
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Mannheimia succiniciproducens MBEL55E   1 1
No Yes Mannheimia haemolytica USMARC_2286   2 2
No Yes Mannheimia haemolytica M42548   2 2
No Yes Mannheimia haemolytica D174   2 2
No Yes Mannheimia haemolytica D153   2 2
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   2 2
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   2 2
No Yes Pasteurella multocida 36950   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   1 1
No Yes Actinobacillus suis H91-0380   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   2 2
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   2 2
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Thioflavicoccus mobilis 8321   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 57 57
No Yes Homo sapiens (NCBI version) Human 27 27
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 18 18
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 6 6
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 4 4
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 5 5
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   2 2
No Yes Malus x domestica (Duplicate) Apple 7 7
No Yes Ricinus communis (Early assembly) Castor bean 9 9
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   6 6
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 8 8
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 8 8
No Yes Phoenix dactylifera (Early draft) Date palm 3 3
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 18 18
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 17 17
No Yes Gorilla gorilla 69_3.1 Western gorilla 16 16
No Yes Pongo abelii 69_2 Sumatran orangutan 20 20
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 17 17
No Yes Macaca mulatta 69_1 Rhesus monkey 17 17
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 19 19
No Yes Otolemur garnettii 69_3 Small-eared galago 16 16
No Yes Microcebus murinus 69_1 Gray mouse lemur 17 16
No Yes Rattus norvegicus 69_3.4 Norway rat 18 18
No Yes Mus musculus 69_38 House mouse 18 18
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 16 16
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 16 16
No Yes Cavia porcellus 69_3 Domestic guinea pig 15 15
No Yes Oryctolagus cuniculus 69_2 Rabbit 17 17
No Yes Ochotona princeps 69 American pika 14 14
No Yes Tupaia belangeri 69 Northern tree shrew 15 15
No Yes Sus scrofa 69_10.2 Pig 17 17
No Yes Bos taurus 69_3.1 Cattle 18 18
No Yes Vicugna pacos 69_1 Alpaca 13 12
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 16 16
No Yes Mustela putorius furo 69_1.0 Domestic ferret 19 19
No Yes Ailuropoda melanoleuca 69_1 Giant panda 18 18
No Yes Canis familiaris 69_3.1 Dog 19 19
No Yes Felis catus 69 Domestic cat 16 16
No Yes Equus caballus 69_2 Horse 17 17
No Yes Myotis lucifugus 69_2.0 Little brown bat 14 14
No Yes Pteropus vampyrus 69_1 Large flying fox 14 14
No Yes Sorex araneus 69_1 European shrew 13 13
No Yes Erinaceus europaeus 69 Western European hedgehog 14 14
No Yes Procavia capensis 69_1 Cape rock hyrax 13 12
No Yes Loxodonta africana 69_3 African savanna elephant 18 18
No Yes Echinops telfairi 69 Small Madagascar hedgehog 14 14
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 16 16
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 9 7
No Yes Macropus eugenii 69_1.0 Tammar wallaby 12 12
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 16 16
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 20 20
No Yes Ornithorhynchus anatinus 69_5 Platypus 14 14
No Yes Petromyzon marinus 69_7.0 Sea lamprey 8 8
No Yes Meleagris gallopavo 69_2 Turkey 14 14
No Yes Gallus gallus 69_2 Chicken 16 16
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 17 17
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 16 16
No Yes Anolis carolinensis 69_2.0 Green anole 15 15
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 19 19
No Yes Latimeria chalumnae 69_1 Coelacanth 16 16
No Yes Gadus morhua 69_1 Atlantic cod 21 20
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 21 21
No Yes Takifugu rubripes 69_4 Torafugu 25 25
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 23 22
No Yes Oryzias latipes 69_1 Japanese medaka 14 14
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 17 17
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 21 21
No Yes Danio rerio 69_9 Zebrafish 25 25
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 2
No Yes Ciona intestinalis 69 Vase tunicate 4 4
No Yes Drosophila melanogaster 69_5 Fruit fly 14 14
No Yes Caenorhabditis elegans 69_215 Roundworm 6 6
No Yes Arabidopsis thaliana 10 Thale cress 8 8
No Yes 5_050719P (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 4
No Yes Combined (meta-genome)   7 7
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   7 7
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   6 6
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   8 8
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   10 10
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   14 14
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   7 7
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21858 21795
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   4 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   3 3
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   2 2
No Yes Sludge/US, Jazz Assembly (meta-genome)   2 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   933 930
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   10531 10444
No Yes Global Ocean Sampling Expedition (GOS)   21 21
No Yes NCBI plasmid sequences (Plasmids)   13 13
No Yes NCBI viral sequences (Viral)   11 11
No Yes PDB chains (SCOP 1.75) (PDB)   72 72
No Yes Protein Data Bank (all PDB sequenc)   960 960
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2555 2555
No Yes TargetDB (Targets)   19 19
No Yes The Salmonella enterica Pan-genome (meta-genome)   1 1
No Yes UniProt viral sequences (Viral)   44 44

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