SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


beta-Roll superfamily domain assignments
in
Bacillus weihenstephanensis KBAB4


No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a beta-Roll domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   247957 247957
No Yes Canis familiaris 76_3.1 Dog 1 1
No Yes Saccoglossus kowalevskii v3.0   27 21
No Yes Oryzias latipes 76_1 Japanese medaka 1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 5 2
No Yes Lottia gigantea Owl limpet 1 1
No Yes Capitella sp. I   35 14
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 2 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Caenorhabditis japonica   1 1
No Yes Mnemiopsis leidyi Sea walnut 2 2
No Yes Acropora digitifera v1.0   9 3
No Yes Nematostella vectensis 1.0 Starlet sea anemone 12 12
No Yes Hydra vulgaris   2 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Dictyostelium discoideum   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 2
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 1 1
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Aegilops tauschii 22   1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Aureococcus anophagefferens   10 4
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Thalassiosira pseudonana CCMP1335   5 3
No Yes Plasmodium falciparum 3D7   2 2
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Thermobaculum terrenum ATCC BAA-798   3 3
No Yes Leptolyngbya sp. PCC 7376   10 6
No Yes Pseudanabaena sp. PCC 7367   46 29
No Yes Acaryochloris marina MBIC11017   103 31
No Yes Synechocystis sp. PCC 6803   15 8
No Yes Synechococcus sp. PCC 7502   14 6
No Yes Synechococcus sp. PCC 6312   20 6
No Yes Synechococcus sp. CC9311   4 4
No Yes Synechococcus elongatus PCC 7942   7 5
No Yes Microcoleus sp. PCC 7113   18 6
No Yes Trichodesmium erythraeum IMS101   77 37
No Yes Geitlerinema sp. PCC 7407   24 6
No Yes Cyanothece sp. PCC 8802   9 6
No Yes Gloeocapsa sp. PCC 7428   59 26
No Yes Halothece sp. PCC 7418   21 14
No Yes Microcystis aeruginosa NIES-843   46 25
No Yes Gloeobacter violaceus PCC 7421   3 2
No Yes Rivularia sp. PCC 7116   94 41
No Yes Calothrix sp. PCC 7507   12 8
No Yes Anabaena variabilis ATCC 29413   64 14
No Yes 'Nostoc azollae' 0708   3 1
No Yes Nostoc sp. PCC 7107   35 9
No Yes Nostoc punctiforme PCC 73102   86 25
No Yes Nostoc sp. PCC 7120   53 18
No Yes Nostoc sp. PCC 7524   60 27
No Yes Anabaena sp. 90   21 13
No Yes Conexibacter woesei DSM 14684   11 6
No Yes Rubrobacter xylanophilus DSM 9941   4 3
No Yes Modestobacter marinus   1 1
No Yes Blastococcus saxobsidens DD2   2 1
No Yes Geodermatophilus obscurus DSM 43160   2 1
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Stackebrandtia nassauensis DSM 44728   25 13
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   2 1
No Yes Streptomyces violaceusniger Tu 4113   2 2
No Yes Streptomyces scabiei 87.22   4 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Kribbella flavida DSM 17836   7 1
No Yes Microlunatus phosphovorus NM-1   6 4
No Yes Salinispora arenicola CNS-205   2 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 1
No Yes Actinoplanes sp. SE50/110   3 1
No Yes Actinoplanes missouriensis 431   25 10
No Yes Segniliparus rotundus DSM 44985   1 1
No Yes Intrasporangium calvum DSM 43043   7 1
No Yes Isoptericola variabilis 225   7 1
No Yes [Cellvibrio] gilvus ATCC 13127   5 3
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter sp. FB24   2 1
No Yes Anaerolinea thermophila UNI-1   2 2
No Yes Ruminococcus albus 7   3 1
No Yes Filifactor alocis ATCC 35896   8 1
No Yes Clostridium cellulovorans 743B   76 12
No Yes Thermodesulfobium narugense DSM 14796   4 2
No Yes Streptococcus sanguinis SK36   4 1
No Yes Paenibacillus mucilaginosus 3016   22 10
No Yes Pelodictyon phaeoclathratiforme BU-1   5 3
No Yes Chlorobium luteolum DSM 273   8 2
No Yes Chlorobium chlorochromatii CaD3   11 10
No Yes Chlorobium phaeobacteroides DSM 266   40 5
No Yes Chlorobium phaeovibrioides DSM 265   12 2
No Yes Chlorobium limicola DSM 245   70 9
No Yes Prosthecochloris aestuarii DSM 271   1 1
No Yes Isosphaera pallida ATCC 43644   35 6
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Rhodopirellula baltica SH 1   5 1
No Yes Pirellula staleyi DSM 6068   16 9
No Yes Coraliomargarita akajimensis DSM 45221   5 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Desulfurispirillum indicum S5   1 1
No Yes Denitrovibrio acetiphilus DSM 12809   1 1
No Yes Aquifex aeolicus VF5   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Nitrospira defluvii   12 1
No Yes Sulfurospirillum deleyianum DSM 6946   24 8
No Yes Arcobacter nitrofigilis DSM 7299   15 4
No Yes Arcobacter butzleri RM4018   1 1
No Yes Campylobacter hominis ATCC BAA-381   21 12
No Yes Campylobacter curvus 525.92   1 1
No Yes Campylobacter concisus 13826   1 1
No Yes Campylobacter sp. 03-427   1 1
No Yes Campylobacter fetus subsp. fetus 82-40   2 1
No Yes uncultured Sulfuricurvum sp. RIFRC-1   16 6
No Yes Sulfuricurvum kujiense DSM 16994   14 4
No Yes Sulfurimonas denitrificans DSM 1251   9 4
No Yes Nitratiruptor sp. SB155-2   3 2
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Desulfomonile tiedjei DSM 6799   41 3
No Yes Desulfotalea psychrophila LSv54   1 1
No Yes Desulfococcus oleovorans Hxd3   10 1
No Yes Desulfomicrobium baculatum DSM 4028   63 6
No Yes Desulfovibrio piezophilus   2 2
No Yes Desulfovibrio aespoeensis Aspo-2   15 4
No Yes Desulfovibrio alaskensis G20   7 2
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   1 1
No Yes Desulfovibrio salexigens DSM 2638   16 5
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   3 1
No Yes Geobacter daltonii FRC-32   12 1
No Yes Geobacter uraniireducens Rf4   12 1
No Yes Pelobacter propionicus DSM 2379   18 2
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Dechloromonas aromatica RCB   2 1
No Yes Azoarcus sp. KH32C   51 10
No Yes Aromatoleum aromaticum EbN1   1 1
No Yes Dechlorosoma suillum PS   15 1
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Laribacter hongkongensis HLHK9   2 2
No Yes Chromobacterium violaceum ATCC 12472   14 2
No Yes Neisseria meningitidis alpha14   12 2
No Yes Neisseria meningitidis FAM18   7 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   101 9
No Yes beta proteobacterium CB   3 3
No Yes Methylibium petroleiphilum PM1   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Leptothrix cholodnii SP-6   14 3
No Yes Ralstonia eutropha JMP134   4 1
No Yes Cupriavidus taiwanensis LMG 19424   5 2
No Yes Cupriavidus necator N-1   4 1
No Yes Ralstonia eutropha H16   3 1
No Yes Ralstonia solanacearum CFBP2957   13 4
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Verminephrobacter eiseniae EF01-2   5 2
No Yes Ramlibacter tataouinensis TTB310   22 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Polaromonas sp. JS666   16 3
No Yes Variovorax paradoxus S110   3 1
No Yes Rhodoferax ferrireducens T118   20 4
No Yes Acidovorax sp. KKS102   3 3
No Yes Acidovorax sp. JS42   2 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   18 3
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Herminiimonas arsenicoxydans   9 1
No Yes Collimonas fungivorans Ter331   10 1
No Yes Janthinobacterium sp. Marseille   6 1
No Yes Herbaspirillum seropedicae SmR1   16 5
No Yes Taylorella equigenitalis MCE9   1 1
No Yes Bordetella avium 197N   2 1
No Yes Bordetella pertussis Tohama I   5 1
No Yes Bordetella parapertussis 12822   6 2
No Yes Bordetella bronchiseptica RB50   6 2
No Yes Achromobacter xylosoxidans A8   5 4
No Yes Achromobacter xylosoxidans   19 3
No Yes Nitrosomonas sp. Is79A3   24 11
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Sideroxydans lithotrophicus ES-1   15 2
No Yes Gallionella capsiferriformans ES-2   10 2
No Yes Methylotenera versatilis 301   27 4
No Yes Methylotenera mobilis JLW8   13 2
No Yes Methylovorus sp. MP688   1 1
No Yes Methylovorus glucosetrophus SIP3-4   44 7
No Yes Methylobacillus flagellatus KT   9 2
No Yes Magnetococcus marinus MC-1   13 8
No Yes Parvularcula bermudensis HTCC2503   13 8
No Yes Brevundimonas subvibrioides ATCC 15264   18 3
No Yes Caulobacter sp. K31   27 13
No Yes Caulobacter crescentus NA1000   8 4
No Yes Caulobacter segnis ATCC 21756   13 7
No Yes Phenylobacterium zucineum HLK1   58 24
No Yes Novosphingobium sp. PP1Y   4 2
No Yes Novosphingobium aromaticivorans DSM 12444   3 3
No Yes Sphingobium japonicum UT26S   36 5
No Yes Sphingobium chlorophenolicum L-1   6 2
No Yes Sphingomonas wittichii RW1   11 5
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   1 1
No Yes Maricaulis maris MCS10   8 3
No Yes Dinoroseobacter shibae DFL 12   26 11
No Yes Phaeobacter gallaeciensis 2.10   52 20
No Yes Pseudovibrio sp. FO-BEG1   52 17
No Yes Jannaschia sp. CCS1   17 10
No Yes Ruegeria sp. TM1040   26 14
No Yes Ruegeria pomeroyi DSS-3   52 15
No Yes Ketogulonicigenium vulgare Y25   7 2
No Yes Ketogulonigenium vulgarum WSH-001   7 2
No Yes Roseobacter litoralis Och 149   41 13
No Yes Roseobacter denitrificans OCh 114   50 15
No Yes Rhodobacter sphaeroides ATCC 17029   19 8
No Yes Rhodobacter capsulatus SB 1003   58 16
No Yes Paracoccus denitrificans PD1222   33 11
No Yes Rhodospirillum photometricum DSM 122   12 2
No Yes Tistrella mobilis KA081020-065   57 12
No Yes Magnetospirillum magneticum AMB-1   22 7
No Yes Rhodospirillum centenum SW   14 9
No Yes Azospirillum lipoferum 4B   59 11
No Yes Azospirillum sp. B510   62 10
No Yes Azospirillum brasilense Sp245   95 39
No Yes Gluconacetobacter xylinus NBRC 3288   1 1
No Yes Granulibacter bethesdensis CGDNIH1   24 14
No Yes Gluconacetobacter diazotrophicus PAl 5   2 1
No Yes Acidiphilium multivorum AIU301   6 3
No Yes Acidiphilium cryptum JF-5   2 1
No Yes Gluconobacter oxydans 621H   2 1
No Yes Acetobacter pasteurianus IFO 3283-01   2 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Micavibrio aeruginosavorus ARL-13   24 6
No Yes Candidatus Puniceispirillum marinum IMCC1322   4 3
No Yes Starkeya novella DSM 506   7 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Azorhizobium caulinodans ORS 571   6 3
No Yes Methylobacterium chloromethanicum CM4   30 12
No Yes Methylobacterium extorquens AM1   43 11
No Yes Methylobacterium sp. 4-46   23 11
No Yes Methylobacterium populi BJ001   34 9
No Yes Methylobacterium nodulans ORS 2060   35 17
No Yes Methylobacterium radiotolerans JCM 2831   7 1
No Yes Ochrobactrum anthropi ATCC 49188   5 2
No Yes Sinorhizobium fredii NGR234   43 14
No Yes Sinorhizobium medicae WSM419   43 14
No Yes Sinorhizobium meliloti AK83   39 15
No Yes Genome sequence of Rhizobium sp. strain IRBG74   2 2
No Yes Rhizobium etli CIAT 652   33 6
No Yes Rhizobium leguminosarum bv. viciae 3841   20 6
No Yes Agrobacterium tumefaciens str. C58   6 4
No Yes Agrobacterium radiobacter K84   2 2
No Yes Agrobacterium sp. H13-3   3 3
No Yes Agrobacterium vitis S4   27 6
No Yes Candidatus Liberibacter asiaticus str. psy62   1 1
No Yes Mesorhizobium sp. BNC1   16 3
No Yes Mesorhizobium opportunistum WSM2075   6 2
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   5 4
No Yes Mesorhizobium loti MAFF303099   10 3
No Yes Methylocella silvestris BL2   5 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   10 1
No Yes Pelagibacterium halotolerans B2   15 3
No Yes Oligotropha carboxidovorans OM4   5 2
No Yes Rhodopseudomonas palustris BisA53   7 3
No Yes Nitrobacter winogradskyi Nb-255   2 1
No Yes Nitrobacter hamburgensis X14   3 2
No Yes Bradyrhizobium japonicum USDA 110   24 9
No Yes Bradyrhizobium sp. ORS 278   7 4
No Yes Saccharophagus degradans 2-40   1 1
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Aggregatibacter actinomycetemcomitans D7S-1   2 1
No Yes Gallibacterium anatis UMN179   9 4
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   10 3
No Yes Oceanimonas sp. GK1   1 1
No Yes Tolumonas auensis DSM 9187   3 2
No Yes Aeromonas veronii B565   4 3
No Yes Aeromonas salmonicida subsp. salmonicida A449   4 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   7 4
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   2 2
No Yes Vibrio sp. Ex25   7 6
No Yes Vibrio harveyi ATCC BAA-1116   15 6
No Yes Vibrio parahaemolyticus RIMD 2210633   6 6
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio anguillarum 775   3 3
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   5 4
No Yes Vibrio cholerae O395   4 3
No Yes Photobacterium profundum SS9   3 2
No Yes Psychromonas ingrahamii 37   2 1
No Yes Psychromonas sp. CNPT3   2 1
No Yes Shewanella piezotolerans WP3   16 4
No Yes Shewanella loihica PV-4   2 2
No Yes Shewanella halifaxensis HAW-EB4   3 2
No Yes Shewanella sediminis HAW-EB3   4 4
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   3 2
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   2 1
No Yes Shewanella woodyi ATCC 51908   5 4
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella violacea DSS12   10 3
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Marinobacter sp. BSs20148   2 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Hahella chejuensis KCTC 2396   41 6
No Yes Marinomonas posidonica IVIA-Po-181   1 1
No Yes Marinomonas sp. MWYL1   3 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Chromohalobacter salexigens DSM 3043   2 1
No Yes Methylomicrobium alcaliphilum   2 1
No Yes Dichelobacter nodosus VCS1703A   3 2
No Yes Xylella fastidiosa M23   24 4
No Yes Xanthomonas axonopodis pv. citri str. 306   14 3
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Thioalkalivibrio sp. K90mix   2 2
No Yes Allochromatium vinosum DSM 180   12 4
No Yes Thiocystis violascens DSM 198   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Legionella pneumophila str. Corby   3 1
No Yes gamma proteobacterium HdN1   13 1
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)   1 1
No Yes Photorhabdus asymbiotica   8 5
No Yes Photorhabdus luminescens subsp. laumondii TTO1   14 7
No Yes Xenorhabdus bovienii SS-2004   2 2
No Yes Xenorhabdus nematophila ATCC 19061   6 3
No Yes Proteus mirabilis HI4320   12 7
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   3 2
No Yes Yersinia pestis Pestoides F   3 2
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   7 4
No Yes Serratia sp. AS12   4 3
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   4 3
No Yes Serratia proteamaculans 568   4 3
No Yes Dickeya zeae Ech1591   4 4
No Yes Pectobacterium wasabiae WPP163   2 2
No Yes Pectobacterium sp. SCC3193   2 2
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   3 3
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Escherichia blattae DSM 4481   7 2
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   27 17
No Yes Enterobacteriaceae bacterium strain FGI 57   3 2
No Yes Shigella dysenteriae Sd197   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   3 3
No Yes Azotobacter vinelandii DJ   47 16
No Yes Pseudomonas sp. TKP   4 4
No Yes Pseudomonas sp. UW4   28 6
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   16 7
No Yes Pseudomonas entomophila L48   6 4
No Yes Pseudomonas syringae pv. tomato str. DC3000   9 3
No Yes Pseudomonas fulva 12-X   9 3
No Yes Pseudomonas putida F1   10 3
No Yes Pseudomonas protegens Pf-5   8 5
No Yes Pseudomonas fluorescens SBW25   6 6
No Yes Pseudomonas mendocina ymp   19 5
No Yes Pseudomonas aeruginosa UCBPP-PA14   2 2
No Yes Pseudomonas sp. VLB120   4 3
No Yes Psychrobacter sp. PRwf-1   7 5
No Yes Acinetobacter oleivorans DR1   4 2
No Yes Acinetobacter calcoaceticus PHEA-2   2 1
No Yes Acinetobacter baumannii ATCC 17978   24 4
No Yes Methylophaga sp. JAM1   23 3
No Yes Cycloclasticus sp. P1   1 1
No Yes Thiomicrospira crunogena XCL-2   1 1
No Yes Francisella cf. novicida 3523   4 1
No Yes Cenarchaeum symbiosum A   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   1 1
No Yes Hordeum vulgare 22 Domesticated barley 6 6
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 2 2
No Yes Plasmodium falciparum HB3   2 2
No Yes Plasmodium falciparum Dd2   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   14 9
No Yes Chamaesiphon minutus PCC 6605   42 13
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   14 7
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   14 7
No Yes Synechocystis sp. PCC 6803 substr. GT-I   14 7
No Yes Synechocystis sp. PCC 6803   15 8
No Yes Cyanobium gracile PCC 6307   9 9
No Yes Dactylococcopsis salina PCC 8305   41 24
No Yes Synechococcus sp. CC9902   9 5
No Yes Synechococcus sp. RCC307   23 7
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   16 13
No Yes Synechococcus sp. WH 7803   10 4
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   7 5
No Yes Prochlorococcus marinus str. NATL1A   6 4
No Yes Prochlorococcus marinus str. AS9601   6 1
No Yes Prochlorococcus marinus str. MIT 9313   6 6
No Yes Prochlorococcus marinus str. MIT 9303   24 23
No Yes Prochlorococcus marinus str. NATL2A   5 5
No Yes Oscillatoria nigro-viridis PCC 7112   135 61
No Yes Oscillatoria acuminata PCC 6304   71 36
No Yes Arthrospira platensis NIES-39   65 34
No Yes Cyanothece sp. PCC 7822   101 27
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   26 8
No Yes Cyanothece sp. ATCC 51142   28 20
No Yes Cyanothece sp. PCC 8801   10 6
No Yes Cyanobacterium aponinum PCC 10605   6 6
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   3 2
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   13 7
No Yes Stanieria cyanosphaera PCC 7437   28 14
No Yes Calothrix parietina Calothrix sp. PCC 6303   31 12
No Yes Cylindrospermum stagnale PCC 7417   22 6
No Yes Anabaena cylindrica PCC 7122   78 29
No Yes Frankia sp. EuI1c   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   4 3
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   4 3
No Yes Amycolatopsis orientalis HCCB10007   9 1
No Yes Actinoplanes friuliensis DSM 7358   7 3
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Ruminococcus champanellensis 18P13   4 1
No Yes Paenibacillus mucilaginosus KNP414   20 9
No Yes Paenibacillus mucilaginosus K02   18 8
No Yes Chlorobium phaeobacteroides BS1   6 2
No Yes Singulisphaera acidiphila DSM 18658   10 1
No Yes Arcobacter butzleri 7h1h   5 2
No Yes Arcobacter butzleri ED-1   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   12 2
No Yes Desulfobacula toluolica Tol2   18 2
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   22 6
No Yes Desulfovibrio vulgaris RCH1   2 2
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   4 3
No Yes Desulfovibrio vulgaris str. Hildenborough   2 2
No Yes Desulfovibrio desulfuricans ND132   2 1
No Yes Geobacter sp. M18   1 1
No Yes Myxococcus stipitatus DSM 14675   3 2
No Yes Neisseria meningitidis G2136   13 2
No Yes Neisseria meningitidis M04-240196   6 2
No Yes Neisseria meningitidis M01-240149   4 2
No Yes Neisseria meningitidis M01-240355   5 2
No Yes Neisseria meningitidis 8013   5 2
No Yes Neisseria meningitidis 053442   10 2
No Yes Neisseria meningitidis Z2491   2 1
No Yes Neisseria meningitidis H44/76   7 2
No Yes Neisseria meningitidis alpha710   7 2
No Yes Neisseria meningitidis MC58   8 2
No Yes Ralstonia solanacearum FQY_4   21 5
No Yes Ralstonia solanacearum Po82   25 5
No Yes Ralstonia solanacearum PSI07   15 4
No Yes Ralstonia solanacearum CMR15   23 7
No Yes Ralstonia solanacearum GMI1000   28 7
No Yes Burkholderia ambifaria MC40-6   15 3
No Yes Burkholderia cenocepacia MC0-3   6 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   3 2
No Yes Alicycliphilus denitrificans BC   3 1
No Yes Variovorax paradoxus B4   1 1
No Yes Bordetella pertussis CS   5 1
No Yes Bordetella parapertussis 18323   5 1
No Yes Bordetella parapertussis Bpp5   6 2
No Yes Bordetella bronchiseptica MO149   6 2
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Nitrosomonas sp. AL212   56 26
No Yes Caulobacter crescentus CB15   8 4
No Yes Zymomonas mobilis subsp. mobilis CP4   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   1 1
No Yes Zymomonas mobilis subsp. mobilis ZM4   1 1
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   48 19
No Yes Phaeobacter gallaeciensis DSM 26640   39 17
No Yes Leisingera methylohalidivorans DSM 14336   25 12
No Yes Octadecabacter antarcticus 307   39 14
No Yes Octadecabacter arcticus 238   21 10
No Yes Rhodobacter sphaeroides KD131   25 10
No Yes Rhodobacter sphaeroides ATCC 17025   10 6
No Yes Rhodobacter sphaeroides 2.4.1   35 10
No Yes Paracoccus aminophilus JCM 7686   32 13
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   20 6
No Yes Rhodospirillum rubrum ATCC 11170   2 2
No Yes Gluconacetobacter diazotrophicus PAl 5   2 1
No Yes Gluconobacter oxydans H24   1 1
No Yes Acetobacter pasteurianus 386B   2 1
No Yes Acetobacter pasteurianus IFO 3283-12   2 1
No Yes Acetobacter pasteurianus IFO 3283-01-42C   2 1
No Yes Acetobacter pasteurianus IFO 3283-32   2 1
No Yes Acetobacter pasteurianus IFO 3283-26   2 1
No Yes Acetobacter pasteurianus IFO 3283-22   2 1
No Yes Acetobacter pasteurianus IFO 3283-07   2 1
No Yes Acetobacter pasteurianus IFO 3283-03   2 1
No Yes Micavibrio aeruginosavorus EPB   27 6
No Yes Methylobacterium extorquens DM4   25 12
No Yes Methylobacterium extorquens PA1   58 15
No Yes Sinorhizobium fredii USDA 257   34 13
No Yes Sinorhizobium fredii HH103   50 13
No Yes Sinorhizobium meliloti 2011   36 14
No Yes Sinorhizobium meliloti GR4   44 17
No Yes Sinorhizobium meliloti Rm41   41 16
No Yes Sinorhizobium meliloti SM11   43 17
No Yes Sinorhizobium meliloti BL225C   43 17
No Yes Sinorhizobium meliloti 1021   43 18
No Yes Rhizobium etli CFN 42   17 2
No Yes Rhizobium etli bv. mimosae str. Mim1   20 6
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   17 4
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   10 5
No Yes Liberibacter crescens BT-1   4 4
No Yes Candidatus Liberibacter solanacearum CLso-ZC1   1 1
No Yes Candidatus Liberibacter asiaticus str. gxpsy   1 1
No Yes Mesorhizobium australicum WSM2073   3 3
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Hyphomicrobium denitrificans 1NES1   3 1
No Yes Oligotropha carboxidovorans OM5   6 3
No Yes Oligotropha carboxidovorans OM5   6 3
No Yes Rhodopseudomonas palustris DX-1   22 4
No Yes Rhodopseudomonas palustris TIE-1   10 2
No Yes Rhodopseudomonas palustris HaA2   20 5
No Yes Rhodopseudomonas palustris BisB5   9 2
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Bradyrhizobium sp. S23321   3 3
No Yes Bradyrhizobium sp. BTAi1   2 2
No Yes Bradyrhizobium oligotrophicum S58   124 9
No Yes Bradyrhizobium japonicum USDA 6   25 8
No Yes Simiduia agarivorans SA1 = DSM 21679   9 2
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   4 3
No Yes Aggregatibacter actinomycetemcomitans ANH9381   2 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   2 1
No Yes Haemophilus somnus 2336   1 1
No Yes Mannheimia haemolytica USMARC_2286   1 1
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   1 1
No Yes Mannheimia haemolytica D171   1 1
No Yes Mannheimia haemolytica D153   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   6 2
No Yes Haemophilus parasuis ZJ0906   2 1
No Yes Actinobacillus suis H91-0380   10 6
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   2 2
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   11 4
No Yes Aeromonas hydrophila ML09-119   6 4
No Yes Vibrio fischeri ES114   2 2
No Yes Vibrio sp. EJY3   4 2
No Yes Vibrio parahaemolyticus BB22OP   5 5
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   5 5
No Yes Vibrio anguillarum Listonella anguillarum M3   3 3
No Yes Vibrio nigripulchritudo VibrioScope   4 3
No Yes Vibrio vulnificus CMCP6   5 4
No Yes Vibrio vulnificus YJ016   5 4
No Yes Vibrio cholerae LMA3984-4   2 2
No Yes Vibrio cholerae M66-2   4 3
No Yes Vibrio cholerae O395   4 3
No Yes Vibrio cholerae IEC224   3 2
No Yes Vibrio cholerae O1 str. 2010EL-1786   4 3
No Yes Vibrio cholerae MJ-1236   4 3
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   2 2
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   2 1
No Yes Shewanella baltica BA175   2 1
No Yes Shewanella baltica OS678   2 1
No Yes Shewanella baltica OS117   2 1
No Yes Shewanella baltica OS223   2 1
No Yes Shewanella baltica OS195   2 1
No Yes Shewanella baltica OS155   2 1
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   17 4
No Yes Xylella fastidiosa M12   11 3
No Yes Xylella fastidiosa Temecula1   17 4
No Yes Xylella fastidiosa 9a5c   18 4
No Yes Xanthomonas citri subsp. citri Aw12879   11 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   12 1
No Yes Xanthomonas axonopodis Xac29-1   15 3
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Spiribacter salinus M19-40   4 1
No Yes Legionella pneumophila str. Paris   2 1
No Yes Legionella pneumophila str. Lens   2 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   2 1
No Yes Legionella pneumophila subsp. pneumophila   3 1
No Yes Legionella pneumophila subsp. pneumophila   2 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 1
No Yes Legionella pneumophila 2300/99 Alcoy   3 1
No Yes Proteus mirabilis BB2000   13 8
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Yersinia pseudotuberculosis PB1/+   3 2
No Yes Yersinia pseudotuberculosis YPIII   3 2
No Yes Yersinia pseudotuberculosis IP 32953   3 2
No Yes Yersinia pestis biovar Microtus str. 91001   3 2
No Yes Yersinia pestis A1122   3 2
No Yes Yersinia pestis Z176003   3 2
No Yes Yersinia pestis D182038   3 2
No Yes Yersinia pestis D106004   3 2
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   3 2
No Yes Yersinia pestis Nepal516   3 2
No Yes Yersinia pestis Antiqua   3 2
No Yes Yersinia pestis Angola   3 2
No Yes Yersinia pestis CO92   3 2
No Yes Yersinia pestis KIM10+   3 2
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   10 6
No Yes Yersinia enterocolitica subsp. palearctica Y11   10 8
No Yes Serratia sp. AS13   4 3
No Yes Serratia plymuthica S13   4 3
No Yes Serratia plymuthica 4Rx13   4 3
No Yes Serratia marcescens FGI94   12 8
No Yes Serratia marcescens WW4   7 6
No Yes Serratia liquefaciens ATCC 27592   6 5
No Yes Dickeya dadantii Ech586   4 4
No Yes Dickeya dadantii 3937   4 4
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli UMNK88   2 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   3 2
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   2 2
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   2 2
No Yes Azotobacter vinelandii CA6   47 16
No Yes Azotobacter vinelandii CA   47 16
No Yes Pseudomonas denitrificans ATCC 13867   19 4
No Yes Pseudomonas syringae pv. phaseolicola 1448A   42 6
No Yes Pseudomonas syringae pv. syringae B728a   35 9
No Yes Pseudomonas stutzeri RCH2   2 1
No Yes Pseudomonas monteilii SB3101   8 3
No Yes Pseudomonas monteilii SB3078   8 3
No Yes Pseudomonas putida H8234   5 3
No Yes Pseudomonas putida HB3267   10 3
No Yes Pseudomonas putida NBRC 14164   3 3
No Yes Pseudomonas putida DOT-T1E   14 6
No Yes Pseudomonas putida S16   7 4
No Yes Pseudomonas putida BIRD-1   2 2
No Yes Pseudomonas putida W619   4 4
No Yes Pseudomonas putida ND6   11 4
No Yes Pseudomonas putida KT2440   16 6
No Yes Pseudomonas putida GB-1   10 3
No Yes Pseudomonas protegens CHA0   7 5
No Yes Pseudomonas poae RE*1-1-14   6 6
No Yes Pseudomonas fluorescens F113   21 7
No Yes Pseudomonas fluorescens A506   17 13
No Yes Pseudomonas fluorescens R124   21 8
No Yes Pseudomonas fluorescens Pf0-1   33 10
No Yes Pseudomonas resinovorans NBRC 106553   55 11
No Yes Pseudomonas mendocina NK-01   2 2
No Yes Pseudomonas aeruginosa SCV20265   2 2
No Yes Pseudomonas aeruginosa MTB-1   2 2
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   2 2
No Yes Pseudomonas aeruginosa PA1   2 2
No Yes Pseudomonas aeruginosa DK2   2 2
No Yes Pseudomonas aeruginosa NCGM2.S1   2 2
No Yes Pseudomonas aeruginosa M18   2 2
No Yes Pseudomonas aeruginosa LESB58   2 2
No Yes Pseudomonas aeruginosa PA7   2 2
No Yes Pseudomonas aeruginosa PAO1   2 2
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter baumannii ZW85-1   6 1
No Yes Acinetobacter baumannii TYTH-1   3 2
No Yes Acinetobacter baumannii BJAB0868   5 2
No Yes Acinetobacter baumannii BJAB0715   4 2
No Yes Acinetobacter baumannii BJAB07104   3 2
No Yes Acinetobacter baumannii TCDC-AB0715   1 1
No Yes Acinetobacter baumannii D1279779   8 2
No Yes Acinetobacter baumannii MDR-TJ   3 2
No Yes Acinetobacter baumannii 1656-2   3 2
No Yes Acinetobacter baumannii ATCC 19606   15 2
No Yes Acinetobacter baumannii AB307-0294   1 1
No Yes Acinetobacter baumannii AYE   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   3 2
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Acinetobacter baumannii ACICU   3 2
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Methylophaga sp. JAM7   14 3
No Yes Francisella cf. novicida Fx1   7 2
No Yes Candidatus Nitrososphaera gargensis Ga9.2   10 8
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Lotus japonicus (Early assembly)   2 2
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Ricinus communis (Early assembly) Castor bean 4 4
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   7 5
No Yes Canis familiaris 69_3.1 Dog 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   9 7
No Yes 2_050719S (meta-genome)   1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   10 8
No Yes 4_050719Q (meta-genome)   4 4
No Yes 4_Deep_abyss (meta-genome)   19 12
No Yes 5_050719P (meta-genome)   5 4
No Yes 5_Below_upper_mesopelagic (meta-genome)   6 4
No Yes 6_Upper_euphotic (meta-genome)   8 6
No Yes 7_Oxygen_minimum_layer (meta-genome)   10 7
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   14 12
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   31 26
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   8 6
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   51 28
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   21 18
No Yes Combined (meta-genome)   96 89
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   114 102
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   26 24
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   17 14
No Yes Dump bottom (Dump bottom) (meta-genome)   93 86
No Yes Dump top (Dump top) (meta-genome)   76 71
No Yes Endophytic microbiome from Rice (meta-genome)   26 21
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   122 70
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   63 47
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   28 20
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   37 26
No Yes Fungus garden combined (combined) (meta-genome)   22 18
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   62 53
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   81 74
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   30 21
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   24 17
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   14 10
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   13 10
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   3 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   8 6
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   11 8
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   8 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   2 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   13 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   8 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   30 26
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   7 5
No Yes Human Gut Community Subject 8 (meta-genome)   5 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   51 46
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   68 66
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   15 11
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   666 431
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   120 77
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   37 23
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   279 178
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   134 88
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   100 68
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   68 64
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   57 54
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   32 30
No Yes NCBI 2017_08 genome   134176 62743
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   107 75
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   6 3
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   3 2
No Yes Protozoadb 2010_08 (Protozoadb)   5 5
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   134 101
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   102 68
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   86 64
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   246 54
No Yes Sludge/US, Jazz Assembly (meta-genome)   154 40
No Yes Sludge/US, Phrap Assembly (meta-genome)   286 87
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   137 94
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   188 181
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   684 649
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   394 382
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   544 516
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   179 174
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   202 194
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   12 8
No Yes STRING v9.0.5 (STRING)   3338 1265
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   25 24
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   295 268
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   39 38
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84294 32866
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   17 10
No Yes Global Ocean Sampling Expedition (GOS)   3624 2359
No Yes NCBI plasmid sequences (Plasmids)   998 320
No Yes PDB chains (SCOP 1.75) (PDB)   13 13
No Yes Protein Data Bank (all PDB sequenc)   87 70
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   141 141
No Yes TargetDB (Targets)   86 28

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]