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Pectin lyase-like superfamily domain assignments
in
Bifidobacterium adolescentis ATCC 15703

Assignment details

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Bifidobacterium adolescentis ATCC 15703 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|119025317|ref|YP_909162.1|   4.77e-38   19-91,226-453   Pectate transeliminase  
gi|119025654|ref|YP_909499.1|   0.0000000000000361   94-255   Pectate lyase-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   740706 740706
No Yes Homo sapiens 76_38 Human 33 20
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 14 8
No Yes Gorilla gorilla 76_3.1 Western gorilla 15 10
No Yes Pongo abelii 76_2 Sumatran orangutan 14 7
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 13 7
No Yes Papio anubis 76 Olive baboon 15 8
No Yes Macaca mulatta 76_1 Rhesus monkey 17 9
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 35 23
No Yes Otolemur garnettii 76_3 Small-eared galago 14 8
No Yes Microcebus murinus 76_1 Gray mouse lemur 12 7
No Yes Rattus norvegicus 76_5.0 Norway rat 15 8
No Yes Mus musculus 76_38 House mouse 24 13
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 10 6
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 14 7
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 12 7
No Yes Cavia porcellus 76_3 Domestic guinea pig 14 8
No Yes Oryctolagus cuniculus 76_2 Rabbit 16 8
No Yes Ochotona princeps 76 American pika 13 8
No Yes Tupaia belangeri 76 Northern tree shrew 11 7
No Yes Sus scrofa 76_10.2 Pig 13 8
No Yes Bos taurus 76_3.1 Cattle 13 7
No Yes Ovis aries 76_3.1 Sheep 17 10
No Yes Vicugna pacos 76_1 Alpaca 9 7
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 12 7
No Yes Mustela putorius furo 76_1.0 Domestic ferret 14 7
No Yes Ailuropoda melanoleuca 76_1 Giant panda 15 9
No Yes Canis familiaris 76_3.1 Dog 18 9
No Yes Felis catus 76_6.2 Domestic cat 17 10
No Yes Equus caballus 76_2 Horse 23 13
No Yes Myotis lucifugus 76_2.0 Little brown bat 17 9
No Yes Pteropus vampyrus 76_1 Large flying fox 12 8
No Yes Sorex araneus 76_1 European shrew 8 6
No Yes Erinaceus europaeus 76 Western European hedgehog 11 6
No Yes Procavia capensis 76_1 Cape rock hyrax 12 7
No Yes Loxodonta africana 76_3 African savanna elephant 20 10
No Yes Echinops telfairi 76 Small Madagascar hedgehog 11 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 17 9
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 7 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 13 8
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 18 11
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 15 8
No Yes Ornithorhynchus anatinus 76_5 Platypus 14 11
No Yes Saccoglossus kowalevskii v3.0   57 43
No Yes Petromyzon marinus 76_7.0 Sea lamprey 13 6
No Yes Meleagris gallopavo 76_2 Turkey 10 7
No Yes Gallus gallus 76_4 Chicken 9 6
No Yes Anas platyrhynchos 76_1.0 Mallard 10 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 8 5
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 8 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 13 10
No Yes Anolis carolinensis 76_2.0 Green anole 13 8
No Yes Xenopus laevis African clawed frog 12 8
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 14 7
No Yes Latimeria chalumnae 76_1 Coelacanth 24 16
No Yes Lepisosteus oculatus 76 Spotted gar 15 11
No Yes Gadus morhua 76_1 Atlantic cod 13 7
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 12 6
No Yes Takifugu rubripes 76_4 Torafugu 15 8
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 14 7
No Yes Oryzias latipes 76_1 Japanese medaka 14 7
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 12 6
No Yes Poecilia formosa 76 Amazon molly 13 6
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 21 10
No Yes Astyanax mexicanus 76 Mexican tetra 13 6
No Yes Danio rerio 76_9 Zebrafish 38 20
No Yes Oikopleura dioica   13 10
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 25 16
No Yes Ciona intestinalis 76 Vase tunicate 12 8
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 7 5
No Yes Adineta vaga   46 41
No Yes Octopus bimaculoides 280   7 5
No Yes Crassostrea gigas 22 Pacific oyster 24 15
No Yes Lottia gigantea Owl limpet 15 11
No Yes Helobdella robusta   14 8
No Yes Capitella sp. I   19 12
No Yes Danaus plexippus OGS1.0 Monarch butterfly 10 6
No Yes Heliconius melpomene Postman butterfly 6 3
No Yes Bombyx mori Domestic silkworm 8 5
No Yes Nasonia vitripennis Jewel wasp 5 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 6 4
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 7 4
No Yes Linepithema humile v1.1 Argentine ant 7 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 9 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 8 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 9 5
No Yes Atta cephalotes v1.1   9 7
No Yes Camponotus floridanus v3.3 Florida carpenter ant 9 4
No Yes Lucilia cuprina Australian sheep blowfly 3 1
No Yes Drosophila grimshawi 1.3   5 3
No Yes Drosophila willistoni 1.3   6 4
No Yes Drosophila pseudoobscura 2.13   6 4
No Yes Drosophila persimilis 1.3   6 4
No Yes Drosophila suzukii   7 4
No Yes Drosophila yakuba 1.3   6 4
No Yes Drosophila simulans 1.3   5 3
No Yes Drosophila sechellia 1.3   6 4
No Yes Drosophila melanogaster 76_5 Fruit fly 12 9
No Yes Drosophila erecta 1.3   6 4
No Yes Drosophila ananassae 1.3   5 3
No Yes Drosophila virilis 1.2   5 2
No Yes Drosophila mojavensis 1.3   5 2
No Yes Megaselia scalaris 22   4 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 8 4
No Yes Culex pipiens quinquefasciatus Southern house mosquito 7 3
No Yes Anopheles darlingi 22 American malaria mosquito 7 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 6 2
No Yes Tribolium castaneum 3.0 Red flour beetle 7 3
No Yes Pediculus humanus corporis (Early assembly) Human body louse 6 2
No Yes Acyrthosiphon pisum Pea aphid 5 3
No Yes Rhodnius prolixus 22   7 3
No Yes Daphnia pulex Common water flea 9 3
No Yes Strigamia maritima 22   15 6
No Yes Sarcoptes scabiei   8 3
No Yes Tetranychus urticae Two-spotted spider mite 6 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 7 4
No Yes Pristionchus pacificus   7 5
No Yes Meloidogyne incognita Southern root-knot nematode 37 36
No Yes Meloidogyne hapla   20 18
No Yes Onchocerca volvulus 22   6 3
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 7 6
No Yes Caenorhabditis japonica   20 14
No Yes Caenorhabditis brenneri   13 5
No Yes Caenorhabditis remanei   12 4
No Yes Caenorhabditis elegans 76_235 Roundworm 11 4
No Yes Caenorhabditis briggsae 2   11 5
No Yes Trichinella spiralis 22   3 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 4 4
No Yes Thelohanellus kitauei   3 3
No Yes Acropora digitifera v1.0   41 30
No Yes Nematostella vectensis 1.0 Starlet sea anemone 28 22
No Yes Hydra vulgaris   5 3
No Yes Amphimedon queenslandica   172 156
No Yes Trichoplax adhaerens   9 5
No Yes Proterospongia sp. ATCC 50818   15 13
No Yes Monosiga brevicollis   45 33
No Yes Sphaeroforma arctica JP610   77 73
No Yes Capsaspora owczarzaki ATCC 30864   48 26
No Yes Mortierella verticillata NRRL 6337   6 6
No Yes Phycomyces blakesleeanus   15 15
No Yes Rhizopus oryzae RA 99-880   25 25
No Yes Mucor circinelloides   3 3
No Yes Rhizomucor miehei CAU432   7 7
No Yes Malassezia globosa CBS 7966   6 4
No Yes Sporisorium reilianum 22   6 5
No Yes Ustilago maydis   5 4
No Yes Mixia osmundae IAM 14324 v1.0   6 6
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   19 19
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   15 15
No Yes Melampsora laricis-populina   15 15
No Yes Rhodotorula graminis WP1 v1.0   5 5
No Yes Sporobolomyces roseus IAM 13481   3 3
No Yes Microbotryum violaceum 22   17 17
No Yes Sphaerobolus stellatus v1.0   29 28
No Yes Piloderma croceum F 1598 v1.0   19 15
No Yes Serpula lacrymans var. lacrymans S7.9   20 15
No Yes Coniophora puteana   24 20
No Yes Hydnomerulius pinastri v2.0   18 15
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   6 5
No Yes Pisolithus microcarpus 441 v1.0   6 4
No Yes Pisolithus tinctorius Marx 270 v1.0   6 4
No Yes Scleroderma citrinum Foug A v1.0   8 6
No Yes Coprinopsis cinerea okayama7 130 v3   10 9
No Yes Pleurotus ostreatus Oyster mushroom 25 23
No Yes Amanita thiersii Skay4041 v1.0   14 13
No Yes Amanita muscaria Koide v1.0 Fly agaric 3 2
No Yes Galerina marginata v1.0   31 28
No Yes Hebeloma cylindrosporum h7 v2.0   11 9
No Yes Laccaria bicolor S238N-H82   17 15
No Yes Agaricus bisporus var. bisporus   14 13
No Yes Schizophyllum commune   20 18
No Yes Stereum hirsutum FP-91666 SS1 v1.0   33 31
No Yes Heterobasidion annosum   16 15
No Yes Gloeophyllum trabeumv1.0   17 15
No Yes Punctularia strigosozonata v1.0   30 27
No Yes Sebacina vermifera MAFF 305830 v1.0   23 22
No Yes Fomitiporia mediterranea v1.0   24 23
No Yes Tulasnella calospora AL13/4D v1.0   52 49
No Yes Postia placenta   30 23
No Yes Wolfiporia cocos MD-104 SS10 v1.0   17 14
No Yes Fomitopsis pinicolav1.0   21 18
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   21 18
No Yes Phanerochaete chrysosporium RP-78 2.1   11 9
No Yes Dichomitus squalens   15 13
No Yes Trametes versicolor v1.0   17 15
No Yes Tremella mesenterica Witches' butter 3 3
No Yes Daldinia eschscholzii EC12 v1.0   16 12
No Yes Apiospora montagnei NRRL 25634 v1.0   27 22
No Yes Magnaporthe poae ATCC 64411 22   28 19
No Yes Magnaporthe grisea 70-15   16 12
No Yes Podospora anserina   21 15
No Yes Sporotrichum thermophile ATCC 42464   21 16
No Yes Thielavia terrestris NRRL 8126   23 16
No Yes Chaetomium globosum CBS 148.51   35 27
No Yes Neurospora tetrasperma   18 12
No Yes Neurospora discreta FGSC 8579   15 10
No Yes Neurospora crassa OR74A   18 12
No Yes Cryphonectria parasitica Chestnut blight fungus 42 36
No Yes Verticillium albo-atrum VaMs.102   61 55
No Yes Verticillium dahliae VdLs.17   61 53
No Yes Acremonium alcalophilumv 1.0   16 12
No Yes Glomerella graminicola 22   33 29
No Yes Fusarium graminearum   40 33
No Yes Nectria haematococca mpVI   61 53
No Yes Fusarium oxysporum f. sp. lycopersici 4286   53 47
No Yes Fusarium verticillioides 7600   50 42
No Yes Trichoderma asperellum CBS 433.97 v1.0   27 19
No Yes Trichoderma atroviride   23 19
No Yes Trichoderma citrinoviride v1.0   29 19
No Yes Trichoderma reesei 1.2   17 11
No Yes Trichoderma virens Gv29-8   30 20
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   14 10
No Yes Trichoderma harzianum CBS 226.95 v1.0   28 18
No Yes Amorphotheca resinae v1.0 Creosote fungus 10 7
No Yes Botrytis cinerea B05.10   42 38
No Yes Sclerotinia sclerotiorum   34 30
No Yes Blumeria graminis 22   2 1
No Yes Didymella exigua CBS 183.55 v1.0   50 44
No Yes Leptosphaeria maculans 22   32 29
No Yes Setosphaeria turcica v1.0   26 23
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   26 23
No Yes Cochliobolus victoriae FI3 v1.0   28 24
No Yes Cochliobolus carbonum 26-R-13 v1.0   27 23
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 26 23
No Yes Alternaria brassicicola   43 37
No Yes Cochliobolus lunatus m118 v2.0   27 24
No Yes Pyrenophora teres f. teres 22   24 20
No Yes Pyrenophora tritici-repentis   24 20
No Yes Stagonospora nodorum   26 20
No Yes Mycosphaerella graminicola IPO323   13 10
No Yes Zasmidium cellare ATCC 36951 v1.0   29 23
No Yes Dothistroma septosporum   16 13
No Yes Septoria musiva v1.0   13 11
No Yes Mycosphaerella fijiensis CIRAD86   19 15
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   30 25
No Yes Paracoccidioides brasiliensis Pb18   8 4
No Yes Coccidioides posadasii RMSCC 3488   2 1
No Yes Coccidioides immitis RS   2 1
No Yes Ajellomyces dermatitidis SLH14081   6 3
No Yes Histoplasma capsulatum class NAmI strain WU24   7 4
No Yes Microsporum canis CBS 113480   3 2
No Yes Trichophyton equinum CBS 127.97   2 1
No Yes Trichophyton verrucosum HKI 0517   2 1
No Yes Arthroderma benhamiae CBS 112371   2 1
No Yes Trichophyton tonsurans CBS 112818   2 1
No Yes Trichophyton rubrum CBS 118892   2 1
No Yes Uncinocarpus reesii 1704   4 2
No Yes Aspergillus zonatus v1.0   18 15
No Yes Penicillium chrysogenum Wisconsin 54-1255   19 16
No Yes Penicillium chrysogenum v1.0   19 16
No Yes Aspergillus acidus v1.0   37 33
No Yes Aspergillus fumigatus Af293   44 35
No Yes Aspergillus brasiliensis v1.0   37 35
No Yes Aspergillus nidulans FGSC A4   43 36
No Yes Aspergillus sydowii v1.0   36 33
No Yes Aspergillus versicolor v1.0   39 36
No Yes Aspergillus glaucus   14 11
No Yes Aspergillus carbonarius ITEM 5010   43 36
No Yes Neosartorya fischeri NRRL 181   55 41
No Yes Aspergillus terreus NIH2624   30 26
No Yes Aspergillus tubingensis v1.0   37 34
No Yes Aspergillus wentii v1.0   31 27
No Yes Aspergillus oryzae RIB40   49 46
No Yes Aspergillus niger 22   36 33
No Yes Aspergillus niger ATCC 1015   31 29
No Yes Aspergillus flavus NRRL3357   51 47
No Yes Aspergillus clavatus NRRL 1   19 12
No Yes Penicillium marneffei ATCC 18224   28 21
No Yes Tuber melanosporum Mel28 22   8 6
No Yes Tuber melanosporum Vittad Perigord truffle 9 7
No Yes Kluyveromyces thermotolerans CBS 6340   2 2
No Yes Lachancea kluyveri   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   4 4
No Yes Catenaria anguillulae PL171 v1.0   8 5
No Yes Allomyces macrogynus ATCC 38327   16 12
No Yes Spizellomyces punctatus DAOM BR117   7 4
No Yes Dictyostelium discoideum   35 26
No Yes Dictyostelium purpureum   33 23
No Yes Entamoeba dispar 1.2   9 4
No Yes Entamoeba invadens 1.2   32 30
No Yes Entamoeba histolytica 1   7 4
No Yes Selaginella moellendorffii   109 108
No Yes Pinus taeda Loblolly pine 371 330
No Yes Picea abies Norway spruce 138 131
No Yes Eucalyptus grandis v201 Rose gum 141 140
No Yes Theobroma cacao B97-61/B2 v1 Cacao 114 112
No Yes Gossypium raimondii v221   292 290
No Yes Citrus clementina v165   149 149
No Yes Citrus sinensis v154 Sweet orange 162 162
No Yes Thellungiella halophila v173   137 137
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 271 269
No Yes Capsella rubella v183   172 172
No Yes Arabidopsis lyrata Lyrate rockcress 175 174
No Yes Arabidopsis thaliana 10 Thale cress 175 175
No Yes Carica papaya Papaya 118 118
No Yes Medicago truncatula Barrel medic 251 250
No Yes Phaseolus vulgaris v186 French bean 181 179
No Yes Glycine max v109 Soybean 289 289
No Yes Cucumis sativus v122 Cucumber 150 150
No Yes Fragaria vesca Wild strawberry 155 149
No Yes Malus domestica v196 Apple 308 302
No Yes Prunus persica v139 Peach 168 164
No Yes Linum usitatissimum v200 Flax 262 252
No Yes Manihot esculenta v147 Cassava 230 228
No Yes Populus trichocarpa v156 Black cottonwood 217 217
No Yes Vitis vinifera Wine grape 140 135
No Yes Mimulus guttatus v140 Spotted monkey flower 168 167
No Yes Solanum lycopersicum v.2.3 Tomato 165 163
No Yes Solanum tuberosum Potato 212 209
No Yes Actinidia chinensis Hongyang   167 165
No Yes Aquilegia coerulea v195   159 156
No Yes Triticum urartu 22   85 84
No Yes Triticum aestivum 22 Bread wheat 250 250
No Yes Aegilops tauschii 22   104 100
No Yes Brachypodium distachyon Stiff brome 87 87
No Yes Oryza barthii 22 African wild rice 109 107
No Yes Oryza meridionalis 22   117 110
No Yes Oryza glumaepatula 22   116 114
No Yes Oryza glaberrima African rice 80 80
No Yes Oryza punctata 22   107 104
No Yes Oryza nivara 22   122 118
No Yes Oryza brachyantha 22 Malo sina 100 97
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 118 118
No Yes Oryza sativa v193 Rice 117 117
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 72 71
No Yes Panicum virgatum v202 Switchgrass 180 180
No Yes Setaria italica v164 Foxtail millet 99 97
No Yes Zea mays subsp. mays Maize 161 160
No Yes Zea mays v181 Maize 174 173
No Yes Sorghum bicolor Sorghum 94 93
No Yes Musa balbisiana Balbis banana 155 152
No Yes Musa acuminata 22 Wild Malaysian banana 154 153
No Yes Amborella trichopoda 22   124 124
No Yes Physcomitrella patens   89 89
No Yes Coccomyxa subellipsoidea sp. C-169 v2   17 16
No Yes Asterochloris sp. Cgr/DA1pho v1.0   6 6
No Yes Chlorella variabilis sp. NC64A   46 38
No Yes Chlorella vulgaris   15 14
No Yes Volvox carteri f. nagariensis   49 31
No Yes Volvox carteri v199   40 26
No Yes Chlamydomonas reinhardtii 4.0   48 31
No Yes Ostreococcus sp. RCC809   15 11
No Yes Ostreococcus lucimarinus CCE9901   8 6
No Yes Ostreococcus tauri   5 4
No Yes Bathycoccus prasinos   6 5
No Yes Micromonas sp. RCC299   12 10
No Yes Micromonas pusilla CCMP1545 v3.0   11 10
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   170 121
No Yes Bigelowiella natans CCMP2755 22   43 33
No Yes Giardia lamblia 2.3   2 1
No Yes Cyanophora paradoxa   175 137
No Yes Leishmania mexicana 2.4   17 6
No Yes Leishmania major strain Friedlin   15 6
No Yes Leishmania infantum JPCM5 2.4   13 5
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   12 5
No Yes Trypanosoma vivax   16 4
No Yes Trypanosoma cruzi strain CL Brener   124 99
No Yes Trypanosoma congolense 2.4   21 10
No Yes Trypanosoma brucei gambiense v4.1   19 6
No Yes Trypanosoma brucei TREU927 v4.1   19 6
No Yes Ectocarpus siliculosus   141 118
No Yes Aureococcus anophagefferens   46 38
No Yes Albugo laibachii 22   5 5
No Yes Pythium iwayamai DAOM BR242034 22   9 8
No Yes Pythium arrhenomanes ATCC 12531 22   17 13
No Yes Pythium ultimum v1.7-2   40 37
No Yes Pythium aphanidermatum DAOM BR444 22   30 29
No Yes Pythium irregulare DAOM BR486 22   20 19
No Yes Pythium vexans DAOM BR484 22   31 27
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 82 75
No Yes Phytophthora sojae 1.1   103 95
No Yes Phytophthora infestans T30-4   102 92
No Yes Phytophthora capsici   99 86
No Yes Hyaloperonospora arabidopsidis 22   23 21
No Yes Phaeodactylum tricornutumCCAP 1055/1   16 16
No Yes Fragilariopsis cylindrus   25 23
No Yes Thalassiosira pseudonana CCMP1335   6 6
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Paramecium tetraurelia   72 62
No Yes Tetrahymena thermophila SB210 1   280 262
No Yes Ichthyophthirius multifiliis strain G5   12 9
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   59 50
No Yes Naegleria gruberi   67 56
No Yes Trichomonas vaginalis   217 172
No Yes Guillardia theta CCMP2712 v1.0   104 76
No Yes Emiliania huxleyi CCMP1516   156 147
No Yes Acholeplasma laidlawii PG-8A   3 2
No Yes Thermobaculum terrenum ATCC BAA-798   5 4
No Yes Leptolyngbya sp. PCC 7376   80 37
No Yes Pseudanabaena sp. PCC 7367   25 16
No Yes Acaryochloris marina MBIC11017   58 24
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   3 2
No Yes Thermosynechococcus elongatus BP-1   16 4
No Yes Synechococcus sp. PCC 7502   3 3
No Yes Synechococcus sp. PCC 6312   4 4
No Yes Microcoleus sp. PCC 7113   98 42
No Yes Trichodesmium erythraeum IMS101   38 13
No Yes Geitlerinema sp. PCC 7407   16 8
No Yes Cyanothece sp. PCC 8802   6 4
No Yes Gloeocapsa sp. PCC 7428   26 11
No Yes Halothece sp. PCC 7418   10 7
No Yes Microcystis aeruginosa NIES-843   7 4
No Yes Gloeobacter violaceus PCC 7421   3 3
No Yes Rivularia sp. PCC 7116   168 56
No Yes Calothrix sp. PCC 7507   31 15
No Yes Anabaena variabilis ATCC 29413   46 23
No Yes 'Nostoc azollae' 0708   5 3
No Yes Nostoc sp. PCC 7107   54 23
No Yes Nostoc punctiforme PCC 73102   38 22
No Yes Nostoc sp. PCC 7120   65 28
No Yes Nostoc sp. PCC 7524   35 15
No Yes Anabaena sp. 90   9 6
No Yes Mycoplasma pulmonis UAB CTIP   3 2
No Yes Conexibacter woesei DSM 14684   17 17
No Yes Eggerthella sp. YY7918   5 5
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Olsenella uli DSM 7084   2 2
No Yes Coriobacterium glomerans PW2   1 1
No Yes Rubrobacter xylanophilus DSM 9941   3 3
No Yes Ilumatobacter coccineus   23 17
No Yes Acidimicrobium ferrooxidans DSM 10331   1 1
No Yes Thermobispora bispora DSM 43833   3 3
No Yes Nakamurella multipartita DSM 44233   7 7
No Yes Acidothermus cellulolyticus 11B   4 4
No Yes Modestobacter marinus   5 5
No Yes Blastococcus saxobsidens DD2   3 3
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   31 30
No Yes Stackebrandtia nassauensis DSM 44728   8 8
No Yes Frankia symbiont of Datisca glomerata   6 5
No Yes Frankia sp. EAN1pec   8 8
No Yes Frankia alni ACN14a   5 3
No Yes Thermobifida fusca YX   3 3
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   8 7
No Yes Thermomonospora curvata DSM 43183   2 2
No Yes Streptosporangium roseum DSM 43021   14 13
No Yes Kitasatospora setae KM-6054   15 12
No Yes Streptomyces coelicolor A3(2)   20 18
No Yes Streptomyces sp. PAMC26508   15 12
No Yes Streptomyces flavogriseus ATCC 33331   17 13
No Yes Streptomyces sp. SirexAA-E   16 13
No Yes Streptomyces griseus subsp. griseus NBRC 13350   12 8
No Yes Streptomyces bingchenggensis BCW-1   45 37
No Yes Streptomyces violaceusniger Tu 4113   29 26
No Yes Streptomyces avermitilis MA-4680   17 14
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   13 7
No Yes Streptomyces scabiei 87.22   25 21
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   16 13
No Yes Actinosynnema mirum DSM 43827   17 15
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Pseudonocardia dioxanivorans CB1190   6 6
No Yes Saccharopolyspora erythraea NRRL 2338   5 4
No Yes Amycolatopsis mediterranei U32   30 29
No Yes Kribbella flavida DSM 17836   14 12
No Yes Nocardioides sp. JS614   2 2
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Propionibacterium acnes SK137   1 1
No Yes Microlunatus phosphovorus NM-1   4 4
No Yes Salinispora arenicola CNS-205   33 32
No Yes Salinispora tropica CNB-440   35 31
No Yes Verrucosispora maris AB-18-032   13 13
No Yes Micromonospora sp. L5   19 17
No Yes Micromonospora aurantiaca ATCC 27029   18 16
No Yes Actinoplanes sp. N902-109   23 21
No Yes Actinoplanes sp. SE50/110   28 28
No Yes Actinoplanes missouriensis 431   28 28
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Mycobacterium sp. JLS   4 3
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Corynebacterium efficiens YS-314   1 1
No Yes Corynebacterium glutamicum R   3 3
No Yes Sanguibacter keddieii DSM 10542   3 3
No Yes Kytococcus sedentarius DSM 20547   1 1
No Yes Beutenbergia cavernae DSM 12333   13 10
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Microbacterium testaceum StLB037   7 7
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   6 6
No Yes Jonesia denitrificans DSM 20603   3 2
No Yes Brachybacterium faecium DSM 4810   2 2
No Yes Isoptericola variabilis 225   3 3
No Yes Xylanimonas cellulosilytica DSM 15894   1 1
No Yes Cellulomonas flavigena DSM 20109   5 5
No Yes Cellulomonas fimi ATCC 484   12 12
No Yes [Cellvibrio] gilvus ATCC 13127   2 2
No Yes Arthrobacter phenanthrenivorans Sphe3   4 4
No Yes Arthrobacter chlorophenolicus A6   9 8
No Yes Arthrobacter aurescens TC1   7 4
No Yes Rothia mucilaginosa DY-18   3 3
No Yes Arthrobacter sp. Rue61a   6 4
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 1
No Yes Bifidobacterium longum subsp. longum JDM301   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl-04   1 1
No Yes Bifidobacterium bifidum S17   4 3
No Yes Bifidobacterium adolescentis ATCC 15703   2 2
No Yes Actinomyces sp. F0330   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   8 5
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Anaerolinea thermophila UNI-1   2 2
No Yes Thermomicrobium roseum DSM 5159   7 4
No Yes Sphaerobacter thermophilus DSM 20745   9 6
No Yes Herpetosiphon aurantiacus DSM 785   22 16
No Yes Roseiflexus sp. RS-1   18 11
No Yes Roseiflexus castenholzii DSM 13941   24 15
No Yes Chloroflexus sp. MS-G   11 6
No Yes Chloroflexus sp. Y-400-fl   17 12
No Yes Chloroflexus aggregans DSM 9485   17 12
No Yes Chloroflexus aurantiacus J-10-fl   16 12
No Yes Truepera radiovictrix DSM 17093   3 3
No Yes Deinococcus gobiensis I-0   2 2
No Yes Deinococcus deserti VCD115   6 4
No Yes Deinococcus maricopensis DSM 21211   5 4
No Yes Deinococcus geothermalis DSM 11300   2 2
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   3 2
No Yes Oceanithermus profundus DSM 14977   7 7
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Meiothermus ruber DSM 1279   3 3
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus scotoductus SA-01   1 1
No Yes Veillonella parvula DSM 2008   3 3
No Yes Megasphaera elsdenii DSM 20460   1 1
No Yes Acidaminococcus intestini RyC-MR95   2 2
No Yes Acidaminococcus fermentans DSM 20731   4 4
No Yes Selenomonas sputigena ATCC 35185   4 4
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   5 5
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   2 2
No Yes Natranaerobius thermophilus JW/NM-WN-LF   4 2
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   4 4
No Yes Clostridium clariflavum DSM 19732   4 4
No Yes Clostridium cellulolyticum H10   10 9
No Yes Clostridium thermocellum ATCC 27405   7 6
No Yes Ethanoligenens harbinense YUAN-3   1 1
No Yes Faecalibacterium prausnitzii   4 4
No Yes Ruminococcus sp.   2 2
No Yes Ruminococcus albus 7   13 11
No Yes Thermaerobacter marianensis DSM 12885   1 1
No Yes Sulfobacillus acidophilus DSM 10332   2 1
No Yes butyrate-producing bacterium SS3/4   2 2
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   4 4
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   4 4
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   2 2
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Eubacterium eligens ATCC 27750   13 11
No Yes Eubacterium limosum KIST612   9 5
No Yes Clostridium difficile 630   3 3
No Yes Filifactor alocis ATCC 35896   1 1
No Yes Clostridium saccharolyticum WM1   4 4
No Yes Clostridium phytofermentans ISDg   20 16
No Yes Clostridium lentocellum DSM 5427   7 7
No Yes [Ruminococcus] obeum   1 1
No Yes Eubacterium rectale M104/1   3 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Coprococcus sp. ART55/1   1 1
No Yes Roseburia hominis A2-183   4 4
No Yes Roseburia intestinalis   9 7
No Yes Butyrivibrio proteoclasticus B316   10 9
No Yes Butyrivibrio fibrisolvens   2 2
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium sp. BNL1100   11 8
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium beijerinckii NCIMB 8052   2 2
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   28 23
No Yes Clostridium acetobutylicum ATCC 824   14 12
No Yes Mahella australiensis 50-1 BON   8 7
No Yes Caldicellulosiruptor obsidiansis OB47   4 4
No Yes Caldicellulosiruptor kronotskyensis 2002   9 8
No Yes Caldicellulosiruptor hydrothermalis 108   7 6
No Yes Caldicellulosiruptor owensensis OL   5 4
No Yes Caldicellulosiruptor lactoaceticus 6A   7 6
No Yes Caldicellulosiruptor kristjanssonii 177R1B   5 4
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   3 3
No Yes Caldicellulosiruptor bescii DSM 6725   5 5
No Yes Thermoanaerobacterium xylanolyticum LX-11   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   2 2
No Yes Coprothermobacter proteolyticus DSM 5265   1 1
No Yes Thermoanaerobacter italicus Ab9   2 2
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Tetragenococcus halophilus NBRC 12172   1 1
No Yes Melissococcus plutonius DAT561   5 4
No Yes Enterococcus sp. 7L76   2 2
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   4 4
No Yes Enterococcus faecalis 62   5 4
No Yes Leuconostoc sp. C2   1 1
No Yes Leuconostoc kimchii IMSNU 11154   1 1
No Yes Leuconostoc citreum KM20   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus kefiranofaciens ZW3   2 2
No Yes Lactobacillus crispatus ST1   3 3
No Yes Lactobacillus rhamnosus Lc 705   3 3
No Yes Lactobacillus johnsonii FI9785   3 3
No Yes Lactobacillus amylovorus GRL1118   2 2
No Yes Lactobacillus reuteri DSM 20016   1 1
No Yes Lactobacillus gasseri ATCC 33323   1 1
No Yes Lactobacillus plantarum JDM1   2 2
No Yes Lactobacillus helveticus DPC 4571   1 1
No Yes Lactobacillus buchneri NRRL B-30929   2 2
No Yes Lactobacillus buchneri   3 3
No Yes Lactobacillus brevis ATCC 367   3 3
No Yes Lactobacillus acidophilus 30SC   2 2
No Yes Streptococcus gallolyticus UCN34   3 3
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   1 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   2 2
No Yes Streptococcus macedonicus ACA-DC 198   1 1
No Yes Streptococcus uberis 0140J   1 1
No Yes Streptococcus parauberis KCTC 11537   1 1
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus pyogenes str. Manfredo   1 1
No Yes Streptococcus pneumoniae P1031   2 1
No Yes Streptococcus mutans NN2025   1 1
No Yes Streptococcus suis P1/7   2 2
No Yes Streptococcus salivarius 57.I   1 1
No Yes Exiguobacterium sp. MH3   8 4
No Yes Exiguobacterium sp. AT1b   2 2
No Yes Exiguobacterium sibiricum 255-15   4 3
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   2 2
No Yes Paenibacillus sp. JDR-2   23 21
No Yes Paenibacillus terrae HPL-003   13 12
No Yes Paenibacillus mucilaginosus 3016   36 31
No Yes Paenibacillus polymyxa M1   13 11
No Yes Listeria innocua Clip11262   2 2
No Yes Solibacillus silvestris StLB046   5 2
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Lysinibacillus sphaericus C3-41   5 4
No Yes Oceanobacillus iheyensis HTE831   3 2
No Yes Anoxybacillus flavithermus WK1   1 1
No Yes Geobacillus sp. WCH70   2 2
No Yes Geobacillus thermodenitrificans NG80-2   2 2
No Yes Halobacillus halophilus DSM 2266   3 3
No Yes Bacillus sp. JS   7 6
No Yes Bacillus sp. 1NLA3E   3 3
No Yes Bacillus amyloliquefaciens FZB42   7 6
No Yes Bacillus atrophaeus 1942   10 8
No Yes Bacillus subtilis subsp. subtilis str. 168   11 8
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   13 11
No Yes Bacillus halodurans C-125   4 4
No Yes Bacillus weihenstephanensis KBAB4   2 2
No Yes Bacillus anthracis str. A0248   2 2
No Yes Bacillus clausii KSM-K16   7 6
No Yes Bacillus cellulosilyticus DSM 2522   3 2
No Yes Bacillus pumilus SAFR-032   6 5
No Yes Bacillus megaterium DSM 319   1 1
No Yes Bacillus coagulans 2-6   1 1
No Yes Macrococcus caseolyticus JCSC5402   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   1 1
No Yes Staphylococcus lugdunensis HKU09-01   2 2
No Yes Staphylococcus haemolyticus JCSC1435   2 2
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   4 3
No Yes Staphylococcus aureus subsp. aureus JH1   1 1
No Yes Staphylococcus aureus   1 1
No Yes Candidatus Cloacamonas acidaminovorans   6 4
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Melioribacter roseus P3M   31 30
No Yes Ignavibacterium album JCM 16511   8 8
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   2 2
No Yes Chlorobium chlorochromatii CaD3   3 3
No Yes Chlorobium phaeobacteroides DSM 266   7 1
No Yes Chlorobium phaeovibrioides DSM 265   2 2
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   2 1
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   27 22
No Yes Saprospira grandis str. Lewin   5 4
No Yes Niastella koreensis GR20-10   61 50
No Yes Chitinophaga pinensis DSM 2588   29 22
No Yes Salinibacter ruber M8   5 4
No Yes Rhodothermus marinus DSM 4252   14 13
No Yes Flexibacter litoralis DSM 6794   3 3
No Yes Belliella baltica DSM 15883   6 6
No Yes Cyclobacterium marinum DSM 745   22 21
No Yes Marivirga tractuosa DSM 4126   7 7
No Yes Fibrella aestuarina   17 16
No Yes Leadbetterella byssophila DSM 17132   6 6
No Yes Dyadobacter fermentans DSM 18053   25 20
No Yes Cytophaga hutchinsonii ATCC 33406   14 6
No Yes Spirosoma linguale DSM 74   22 22
No Yes Runella slithyformis DSM 19594   12 12
No Yes Parabacteroides distasonis ATCC 8503   7 5
No Yes Tannerella forsythia ATCC 43037   11 11
No Yes Paludibacter propionicigenes WB4   3 3
No Yes Prevotella melaninogenica ATCC 25845   2 2
No Yes Prevotella intermedia 17   6 6
No Yes Prevotella denticola F0289   3 3
No Yes Prevotella ruminicola 23   11 11
No Yes Porphyromonas asaccharolytica DSM 20707   3 3
No Yes Porphyromonas gingivalis ATCC 33277   2 2
No Yes Alistipes finegoldii DSM 17242   7 7
No Yes Bacteroides salanitronis DSM 18170   27 25
No Yes Bacteroides helcogenes P 36-108   2 2
No Yes Bacteroides vulgatus ATCC 8482   28 28
No Yes Bacteroides thetaiotaomicron VPI-5482   31 30
No Yes Bacteroides fragilis YCH46   6 6
No Yes Pedobacter saltans DSM 12145   69 65
No Yes Solitalea canadensis DSM 3403   6 5
No Yes Pedobacter heparinus DSM 2366   34 33
No Yes Sphingobacterium sp. 21   22 20
No Yes Fluviicola taffensis DSM 16823   13 9
No Yes Owenweeksia hongkongensis DSM 17368   27 17
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Krokinobacter sp. 4H-3-7-5   4 3
No Yes Gramella forsetii KT0803   6 4
No Yes Lacinutrix sp. 5H-3-7-4   4 3
No Yes Maribacter sp. HTCC2170   8 8
No Yes Robiginitalea biformata HTCC2501   7 6
No Yes Croceibacter atlanticus HTCC2559   11 3
No Yes Aequorivita sublithincola DSM 14238   17 5
No Yes Zobellia galactanivorans   34 30
No Yes Muricauda ruestringensis DSM 13258   5 4
No Yes Cellulophaga algicola DSM 14237   20 18
No Yes Cellulophaga lytica DSM 7489   10 8
No Yes Flavobacteriaceae bacterium 3519-10   10 9
No Yes Polaribacter sp. MED152   8 6
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   4 4
No Yes Ornithobacterium rhinotracheale DSM 15997   2 2
No Yes Capnocytophaga canimorsus Cc5   3 3
No Yes Capnocytophaga ochracea DSM 7271   1 1
No Yes Weeksella virosa DSM 16922   4 3
No Yes Flavobacterium indicum GPTSA100-9   2 2
No Yes Flavobacterium psychrophilum JIP02/86   2 2
No Yes Flavobacterium branchiophilum FL-15   4 4
No Yes Flavobacterium columnare ATCC 49512   5 5
No Yes Flavobacterium johnsoniae UW101   25 24
No Yes Fibrobacter succinogenes subsp. succinogenes S85   14 14
No Yes Waddlia chondrophila WSU 86-1044   1 1
No Yes Parachlamydia acanthamoebae UV-7   2 2
No Yes Simkania negevensis Z   14 7
No Yes Chlamydophila pecorum E58   4 3
No Yes Chlamydophila pneumoniae TW-183   5 4
No Yes Chlamydophila caviae GPIC   1 1
No Yes Chlamydophila felis Fe/C-56   1 1
No Yes Chlamydophila abortus S26/3   1 1
No Yes Chlamydia psittaci 01DC11   2 2
No Yes Chlamydia trachomatis B/Jali20/OT   1 1
No Yes Phycisphaera mikurensis NBRC 102666   8 8
No Yes Isosphaera pallida ATCC 43644   19 11
No Yes Planctomyces brasiliensis DSM 5305   13 12
No Yes Planctomyces limnophilus DSM 3776   11 10
No Yes Rhodopirellula baltica SH 1   30 16
No Yes Pirellula staleyi DSM 6068   14 9
No Yes Methylacidiphilum infernorum V4   3 3
No Yes Coraliomargarita akajimensis DSM 45221   9 9
No Yes Opitutus terrae PB90-1   42 27
No Yes Akkermansia muciniphila ATCC BAA-835   9 7
No Yes Fretibacterium fastidiosum   2 1
No Yes Turneriella parva DSM 21527   3 3
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   2 2
No Yes Leptospira interrogans serovar Lai str. IPAV   7 7
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   4 4
No Yes Borrelia bissettii DN127   1 1
No Yes Borrelia afzelii PKo   1 1
No Yes Borrelia burgdorferi B31   1 1
No Yes Borrelia duttonii Ly   1 1
No Yes Spirochaeta smaragdinae DSM 11293   2 2
No Yes Sphaerochaeta pleomorpha str. Grapes   4 3
No Yes Sphaerochaeta globus str. Buddy   3 3
No Yes Sphaerochaeta coccoides DSM 17374   2 2
No Yes Spirochaeta caldaria DSM 7334   7 7
No Yes Treponema azotonutricium ZAS-9   24 10
No Yes Treponema primitia ZAS-2   18 10
No Yes Treponema brennaborense DSM 12168   8 7
No Yes Treponema succinifaciens DSM 2489   2 2
No Yes Treponema denticola ATCC 35405   10 7
No Yes Spirochaeta africana DSM 8902   1 1
No Yes Spirochaeta thermophila DSM 6192   4 4
No Yes Calditerrivibrio nitroreducens DSM 19672   4 2
No Yes Denitrovibrio acetiphilus DSM 12809   1 1
No Yes Marinitoga piezophila KA3   2 1
No Yes Petrotoga mobilis SJ95   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   5 3
No Yes Kosmotoga olearia TBF 19.5.1   4 4
No Yes Thermosipho melanesiensis BI429   1 1
No Yes Thermosipho africanus TCF52B   1 1
No Yes Thermotoga lettingae TMO   1 1
No Yes Thermotoga thermarum DSM 5069   3 3
No Yes Thermotoga sp. RQ2   3 3
No Yes Thermotoga petrophila RKU-1   1 1
No Yes Thermotoga maritima MSB8   2 2
No Yes Thermovibrio ammonificans HB-1   3 3
No Yes Persephonella marina EX-H1   2 2
No Yes Aquifex aeolicus VF5   1 1
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Dictyoglomus turgidum DSM 6724   5 5
No Yes Dictyoglomus thermophilum H-6-12   3 3
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   28 25
No Yes Granulicella tundricola MP5ACTX9   14 14
No Yes Granulicella mallensis MP5ACTX8   20 20
No Yes Candidatus Koribacter versatilis Ellin345   13 13
No Yes Terriglobus saanensis SP1PR4   19 17
No Yes Terriglobus roseus DSM 18391   20 18
No Yes Acidobacterium capsulatum ATCC 51196   9 7
No Yes Thermodesulfovibrio yellowstonii DSM 11347   1 1
No Yes Candidatus Nitrospira defluvii   15 13
No Yes Streptobacillus moniliformis DSM 12112   13 12
No Yes Sebaldella termitidis ATCC 33386   11 11
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   4 4
No Yes Candidatus Methylomirabilis oxyfera   2 2
No Yes candidate division WWE3 bacterium RAAC2_WWE3_1   2 2
No Yes candidate division SR1 bacterium RAAC1_SR1_1   9 3
No Yes Candidatus Saccharibacteria bacterium RAAC3_TM7_1   2 1
No Yes Candidatus Saccharimonas aalborgensis   1 1
No Yes Acidithiobacillus ferrivorans SS3   4 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Nitratifractor salsuginis DSM 16511   5 5
No Yes Sulfurospirillum barnesii SES-3   4 4
No Yes Arcobacter sp. L   2 2
No Yes Arcobacter nitrofigilis DSM 7299   5 5
No Yes Arcobacter butzleri RM4018   1 1
No Yes Campylobacter hominis ATCC BAA-381   2 2
No Yes Campylobacter lari RM2100   1 1
No Yes Campylobacter curvus 525.92   2 2
No Yes Campylobacter concisus 13826   7 7
No Yes Campylobacter sp. 03-427   2 2
No Yes Campylobacter fetus subsp. fetus 82-40   3 3
No Yes uncultured Sulfuricurvum sp. RIFRC-1   1 1
No Yes Sulfurimonas autotrophica DSM 16294   3 3
No Yes Sulfurimonas denitrificans DSM 1251   6 6
No Yes Wolinella succinogenes DSM 1740   2 2
No Yes Helicobacter cetorum MIT 00-7128   1 1
No Yes Helicobacter mustelae 12198   2 2
No Yes Helicobacter cinaedi PAGU611   1 1
No Yes Nitratiruptor sp. SB155-2   3 3
No Yes Sulfurovum sp. NBC37-1   2 2
No Yes Desulfobacca acetoxidans DSM 11109   4 4
No Yes Syntrophus aciditrophicus SB   5 5
No Yes Desulfomonile tiedjei DSM 6799   2 2
No Yes Syntrophobacter fumaroxidans MPOB   6 6
No Yes Desulfurivibrio alkaliphilus AHT2   1 1
No Yes Desulfotalea psychrophila LSv54   4 4
No Yes Desulfobulbus propionicus DSM 2032   3 3
No Yes Desulfatibacillum alkenivorans AK-01   18 10
No Yes Desulfobacterium autotrophicum HRM2   8 4
No Yes Desulfococcus oleovorans Hxd3   22 10
No Yes Desulfomicrobium baculatum DSM 4028   2 2
No Yes Desulfovibrio piezophilus   4 4
No Yes Desulfovibrio aespoeensis Aspo-2   4 4
No Yes Desulfovibrio magneticus RS-1   9 5
No Yes Desulfovibrio salexigens DSM 2638   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   10 8
No Yes Hippea maritima DSM 10411   1 1
No Yes Geobacter daltonii FRC-32   19 9
No Yes Geobacter sp. M21   3 3
No Yes Geobacter uraniireducens Rf4   10 8
No Yes Geobacter lovleyi SZ   2 2
No Yes Geobacter bemidjiensis Bem   2 2
No Yes Geobacter sulfurreducens KN400   8 5
No Yes Geobacter metallireducens GS-15   10 7
No Yes Pelobacter propionicus DSM 2379   3 3
No Yes Pelobacter carbinolicus DSM 2380   3 3
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   16 15
No Yes Sorangium cellulosum 'So ce 56'   45 38
No Yes Anaeromyxobacter sp. Fw109-5   7 7
No Yes Anaeromyxobacter dehalogenans 2CP-1   7 7
No Yes Stigmatella aurantiaca DW4/3-1   21 20
No Yes Corallococcus coralloides DSM 2259   28 26
No Yes Myxococcus xanthus DK 1622   11 11
No Yes Myxococcus fulvus HW-1   11 11
No Yes Dechloromonas aromatica RCB   4 4
No Yes Thauera sp. MZ1T   2 2
No Yes Azoarcus sp. KH32C   2 2
No Yes Azoarcus sp. BH72   3 3
No Yes Aromatoleum aromaticum EbN1   2 2
No Yes Dechlorosoma suillum PS   4 4
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Laribacter hongkongensis HLHK9   3 2
No Yes Chromobacterium violaceum ATCC 12472   6 6
No Yes Neisseria meningitidis alpha14   7 7
No Yes Neisseria meningitidis FAM18   5 5
No Yes Neisseria lactamica 020-06   13 13
No Yes Neisseria gonorrhoeae NCCP11945   8 8
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   5 5
No Yes Methylibium petroleiphilum PM1   2 2
No Yes Rubrivivax gelatinosus IL144   8 6
No Yes Leptothrix cholodnii SP-6   5 5
No Yes Burkholderia rhizoxinica HKI 454   2 2
No Yes Burkholderia phytofirmans PsJN   6 6
No Yes Burkholderia phymatum STM815   10 10
No Yes Burkholderia xenovorans LB400   7 7
No Yes Ralstonia eutropha JMP134   7 7
No Yes Cupriavidus taiwanensis LMG 19424   3 3
No Yes Cupriavidus metallidurans CH34   9 7
No Yes Cupriavidus necator N-1   2 2
No Yes Ralstonia eutropha H16   3 3
No Yes Ralstonia pickettii 12D   4 4
No Yes Ralstonia solanacearum CFBP2957   9 9
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   1 1
No Yes Burkholderia sp. RPE64   14 14
No Yes Burkholderia sp. CCGE1002   19 9
No Yes Burkholderia thailandensis E264   9 7
No Yes Burkholderia pseudomallei 1106a   7 7
No Yes Burkholderia mallei SAVP1   3 3
No Yes Burkholderia ambifaria AMMD   17 10
No Yes Burkholderia cenocepacia HI2424   17 7
No Yes Burkholderia multivorans ATCC 17616   18 8
No Yes Burkholderia vietnamiensis G4   17 13
No Yes Burkholderia gladioli BSR3   23 19
No Yes Burkholderia glumae BGR1   14 14
No Yes Alicycliphilus denitrificans K601   1 1
No Yes Delftia sp. Cs1-4   4 3
No Yes Delftia acidovorans SPH-1   5 4
No Yes Polaromonas naphthalenivorans CJ2   4 4
No Yes Variovorax paradoxus S110   8 6
No Yes Rhodoferax ferrireducens T118   2 2
No Yes Acidovorax ebreus TPSY   1 1
No Yes Acidovorax sp. JS42   1 1
No Yes Acidovorax citrulli AAC00-1   6 6
No Yes Acidovorax avenae subsp. avenae ATCC 19860   6 5
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Herminiimonas arsenicoxydans   3 3
No Yes Collimonas fungivorans Ter331   15 9
No Yes Janthinobacterium sp. Marseille   19 19
No Yes Herbaspirillum seropedicae SmR1   7 7
No Yes Pusillimonas sp. T7-7   10 8
No Yes Advenella kashmirensis WT001   1 1
No Yes Taylorella asinigenitalis MCE3   3 2
No Yes Taylorella equigenitalis MCE9   3 2
No Yes Bordetella petrii DSM 12804   5 5
No Yes Bordetella avium 197N   10 10
No Yes Bordetella pertussis Tohama I   18 12
No Yes Bordetella parapertussis 12822   21 12
No Yes Bordetella bronchiseptica RB50   28 15
No Yes Achromobacter xylosoxidans A8   20 11
No Yes Achromobacter xylosoxidans   22 19
No Yes Thiobacillus denitrificans ATCC 25259   3 2
No Yes Nitrosospira multiformis ATCC 25196   10 5
No Yes Nitrosomonas sp. Is79A3   1 1
No Yes Nitrosomonas eutropha C91   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Sideroxydans lithotrophicus ES-1   2 1
No Yes Methylotenera versatilis 301   3 3
No Yes Methylobacillus flagellatus KT   3 3
No Yes Magnetococcus marinus MC-1   3 3
No Yes Parvularcula bermudensis HTCC2503   3 3
No Yes Asticcacaulis excentricus CB 48   11 11
No Yes Brevundimonas subvibrioides ATCC 15264   10 9
No Yes Caulobacter sp. K31   8 6
No Yes Caulobacter crescentus NA1000   4 4
No Yes Caulobacter segnis ATCC 21756   6 4
No Yes Phenylobacterium zucineum HLK1   3 3
No Yes Erythrobacter litoralis HTCC2594   6 5
No Yes Sphingopyxis alaskensis RB2256   5 4
No Yes Novosphingobium sp. PP1Y   5 5
No Yes Novosphingobium aromaticivorans DSM 12444   5 5
No Yes Sphingobium sp. SYK-6   6 3
No Yes Sphingobium japonicum UT26S   5 3
No Yes Sphingobium chlorophenolicum L-1   23 8
No Yes Sphingomonas sp. MM-1   24 5
No Yes Sphingomonas wittichii RW1   1 1
No Yes Maricaulis maris MCS10   5 4
No Yes Hirschia baltica ATCC 49814   9 7
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Dinoroseobacter shibae DFL 12   5 5
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Pseudovibrio sp. FO-BEG1   14 8
No Yes Jannaschia sp. CCS1   3 3
No Yes Ruegeria sp. TM1040   1 1
No Yes Ruegeria pomeroyi DSS-3   3 3
No Yes Ketogulonicigenium vulgare Y25   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter litoralis Och 149   8 8
No Yes Roseobacter denitrificans OCh 114   3 3
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Rhodobacter capsulatus SB 1003   2 2
No Yes Paracoccus denitrificans PD1222   4 4
No Yes Rhodospirillum photometricum DSM 122   2 2
No Yes Tistrella mobilis KA081020-065   10 8
No Yes Magnetospirillum magneticum AMB-1   2 2
No Yes Rhodospirillum centenum SW   9 9
No Yes Rhodospirillum rubrum F11   3 2
No Yes Azospirillum lipoferum 4B   20 11
No Yes Azospirillum sp. B510   14 11
No Yes Azospirillum brasilense Sp245   20 18
No Yes Granulibacter bethesdensis CGDNIH1   3 2
No Yes Gluconacetobacter diazotrophicus PAl 5   5 5
No Yes Acidiphilium multivorum AIU301   9 5
No Yes Acidiphilium cryptum JF-5   6 4
No Yes Acetobacter pasteurianus IFO 3283-01   1 1
No Yes Polymorphum gilvum SL003B-26A1   4 3
No Yes Micavibrio aeruginosavorus ARL-13   12 3
No Yes alpha proteobacterium HIMB5   6 2
No Yes Starkeya novella DSM 506   7 3
No Yes Xanthobacter autotrophicus Py2   4 3
No Yes Azorhizobium caulinodans ORS 571   36 9
No Yes Methylobacterium chloromethanicum CM4   6 6
No Yes Methylobacterium extorquens AM1   5 5
No Yes Methylobacterium sp. 4-46   11 11
No Yes Methylobacterium populi BJ001   10 4
No Yes Methylobacterium nodulans ORS 2060   12 12
No Yes Methylobacterium radiotolerans JCM 2831   5 5
No Yes Parvibaculum lavamentivorans DS-1   7 4
No Yes Ochrobactrum anthropi ATCC 49188   29 11
No Yes Brucella microti CCM 4915   18 5
No Yes Brucella pinnipedialis B2/94   12 3
No Yes Brucella canis ATCC 23365   2 2
No Yes Brucella suis ATCC 23445   2 2
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   9 3
No Yes Brucella abortus S19   18 6
No Yes Sinorhizobium fredii NGR234   4 4
No Yes Sinorhizobium medicae WSM419   6 5
No Yes Sinorhizobium meliloti AK83   8 7
No Yes Genome sequence of Rhizobium sp. strain IRBG74   6 6
No Yes Rhizobium etli CIAT 652   13 12
No Yes Rhizobium leguminosarum bv. viciae 3841   16 12
No Yes Agrobacterium tumefaciens str. C58   6 6
No Yes Agrobacterium radiobacter K84   4 4
No Yes Agrobacterium sp. H13-3   8 7
No Yes Agrobacterium vitis S4   7 7
No Yes Mesorhizobium sp. BNC1   22 11
No Yes Mesorhizobium opportunistum WSM2075   7 5
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   11 8
No Yes Mesorhizobium loti MAFF303099   7 6
No Yes Methylocella silvestris BL2   5 5
No Yes Beijerinckia indica subsp. indica ATCC 9039   8 5
No Yes Pelagibacterium halotolerans B2   4 4
No Yes Rhodomicrobium vannielii ATCC 17100   2 2
No Yes Hyphomicrobium sp. MC1   5 4
No Yes Hyphomicrobium denitrificans ATCC 51888   9 8
No Yes Oligotropha carboxidovorans OM4   4 3
No Yes Rhodopseudomonas palustris BisA53   12 12
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   15 9
No Yes Bradyrhizobium japonicum USDA 110   13 12
No Yes Bradyrhizobium sp. ORS 278   14 10
No Yes Methylocystis sp. SC2   1 1
No Yes Bartonella tribocorum CIP 105476   23 19
No Yes Bartonella clarridgeiae 73   12 12
No Yes Bartonella henselae str. Houston-1   17 15
No Yes Bartonella grahamii as4aup   27 22
No Yes Bartonella quintana str. Toulouse   7 6
No Yes Bartonella bacilliformis KC583   5 5
No Yes Saccharophagus degradans 2-40   37 34
No Yes Teredinibacter turnerae T7901   13 12
No Yes Cellvibrio japonicus Ueda107   14 14
No Yes Haemophilus somnus 129PT   1 1
No Yes Gallibacterium anatis UMN179   5 5
No Yes Pasteurella multocida subsp. multocida str. 3480   3 3
No Yes Haemophilus parasuis SH0165   2 2
No Yes Haemophilus ducreyi 35000HP   4 4
No Yes Haemophilus parainfluenzae T3T1   1 1
No Yes Haemophilus influenzae PittEE   4 4
No Yes Actinobacillus succinogenes 130Z   2 2
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   2 2
No Yes Oceanimonas sp. GK1   1 1
No Yes Tolumonas auensis DSM 9187   3 3
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio furnissii NCTC 11218   2 2
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   2 2
No Yes Psychromonas ingrahamii 37   3 3
No Yes Psychromonas sp. CNPT3   1 1
No Yes Ferrimonas balearica DSM 9799   9 9
No Yes Shewanella piezotolerans WP3   2 2
No Yes Shewanella loihica PV-4   3 3
No Yes Shewanella halifaxensis HAW-EB4   4 4
No Yes Shewanella sediminis HAW-EB3   3 3
No Yes Shewanella denitrificans OS217   3 2
No Yes Shewanella pealeana ATCC 700345   3 3
No Yes Shewanella oneidensis MR-1   2 2
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   8 8
No Yes Shewanella sp. MR-4   2 2
No Yes Shewanella amazonensis SB2B   2 2
No Yes Shewanella violacea DSS12   2 2
No Yes Shewanella frigidimarina NCIMB 400   2 1
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Colwellia psychrerythraea 34H   2 2
No Yes Pseudoalteromonas sp. SM9913   2 2
No Yes Pseudoalteromonas atlantica T6c   8 5
No Yes Pseudoalteromonas haloplanktis TAC125   2 1
No Yes Glaciecola sp. 4H-3-7+YE-5   7 5
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Marinobacter sp. BSs20148   2 2
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   2 2
No Yes Marinobacter aquaeolei VT8   2 2
No Yes Alteromonas sp. SN2   8 4
No Yes Alteromonas macleodii str. 'Deep ecotype'   4 4
No Yes Hahella chejuensis KCTC 2396   19 17
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Marinomonas posidonica IVIA-Po-181   5 5
No Yes Marinomonas sp. MWYL1   6 5
No Yes Marinomonas mediterranea MMB-1   5 4
No Yes Chromohalobacter salexigens DSM 3043   2 2
No Yes Methylomicrobium alcaliphilum   2 2
No Yes Methylomonas methanica MC09   2 2
No Yes Methylococcus capsulatus str. Bath   3 2
No Yes Rhodanobacter denitrificans   1 1
No Yes Frateuria aurantia DSM 6220   4 3
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   2 2
No Yes Stenotrophomonas maltophilia K279a   16 8
No Yes Xylella fastidiosa M23   5 5
No Yes Xanthomonas axonopodis pv. citri str. 306   20 10
No Yes Xanthomonas albilineans GPE PC73   7 6
No Yes Xanthomonas oryzae pv. oryzae PXO99A   16 9
No Yes Xanthomonas campestris pv. campestris str. B100   20 11
No Yes Halothiobacillus neapolitanus c2   4 3
No Yes Alkalilimnicola ehrlichii MLHE-1   2 2
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   5 5
No Yes Thioalkalivibrio sp. K90mix   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Thiocystis violascens DSM 198   3 2
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus halophilus Nc4   2 2
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Legionella longbeachae NSW150   3 3
No Yes Legionella pneumophila str. Corby   1 1
No Yes gamma proteobacterium HdN1   1 1
No Yes Photorhabdus asymbiotica   10 8
No Yes Photorhabdus luminescens subsp. laumondii TTO1   11 9
No Yes Xenorhabdus bovienii SS-2004   5 4
No Yes Xenorhabdus nematophila ATCC 19061   2 2
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Proteus mirabilis HI4320   7 7
No Yes Edwardsiella ictaluri 93-146   5 4
No Yes Edwardsiella tarda EIB202   4 4
No Yes Rahnella sp. Y9602   17 16
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   13 12
No Yes Yersinia pseudotuberculosis IP 31758   17 17
No Yes Yersinia pestis Pestoides F   15 15
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   11 11
No Yes Serratia sp. AS12   10 9
No Yes Serratia sp. ATCC 39006   16 15
No Yes Serratia plymuthica AS9   10 9
No Yes Serratia proteamaculans 568   10 9
No Yes Dickeya dadantii Ech703   13 13
No Yes Dickeya zeae Ech1591   20 20
No Yes Pectobacterium wasabiae WPP163   17 17
No Yes Pectobacterium sp. SCC3193   16 16
No Yes Pectobacterium atrosepticum SCRI1043   17 17
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   20 20
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Pantoea sp. At-9b   8 8
No Yes Pantoea vagans C9-1   11 11
No Yes Pantoea ananatis LMG 20103   8 8
No Yes Erwinia tasmaniensis Et1/99   6 6
No Yes Erwinia sp. Ejp617   8 8
No Yes Erwinia billingiae Eb661   9 9
No Yes Erwinia pyrifoliae Ep1/96   7 7
No Yes Erwinia amylovora ATCC 49946   7 7
No Yes Escherichia blattae DSM 4481   6 6
No Yes Cronobacter turicensis z3032   9 9
No Yes Cronobacter sakazakii ES15   6 6
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   17 9
No Yes Enterobacteriaceae bacterium strain FGI 57   13 11
No Yes Shigella sonnei Ss046   5 5
No Yes Shigella flexneri 5 str. 8401   6 6
No Yes Shigella dysenteriae Sd197   8 8
No Yes Shigella boydii CDC 3083-94   7 7
No Yes Salmonella bongori NCTC 12419   6 6
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   7 6
No Yes Klebsiella oxytoca E718   12 10
No Yes Klebsiella variicola At-22   5 5
No Yes Klebsiella pneumoniae NTUH-K2044   2 2
No Yes Enterobacter aerogenes KCTC 2190   9 8
No Yes Escherichia fergusonii ATCC 35469   8 7
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   10 9
No Yes Enterobacter sp. R4-368   10 10
No Yes Enterobacter sp. 638   8 8
No Yes Enterobacter asburiae LF7a   9 9
No Yes Enterobacter cloacae subsp. dissolvens SDM   6 6
No Yes Citrobacter rodentium ICC168   25 23
No Yes Citrobacter koseri ATCC BAA-895   5 5
No Yes Azotobacter vinelandii DJ   13 11
No Yes Pseudomonas sp. TKP   8 8
No Yes Pseudomonas sp. UW4   3 3
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   9 9
No Yes Pseudomonas entomophila L48   20 9
No Yes Pseudomonas syringae pv. tomato str. DC3000   12 11
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas fulva 12-X   4 4
No Yes Pseudomonas putida F1   5 5
No Yes Pseudomonas protegens Pf-5   10 9
No Yes Pseudomonas fluorescens SBW25   10 10
No Yes Pseudomonas mendocina ymp   3 3
No Yes Pseudomonas aeruginosa UCBPP-PA14   9 8
No Yes Pseudomonas sp. VLB120   6 6
No Yes Psychrobacter arcticus 273-4   1 1
No Yes Acinetobacter oleivorans DR1   5 5
No Yes Acinetobacter calcoaceticus PHEA-2   5 5
No Yes Acinetobacter baumannii ATCC 17978   3 3
No Yes Acinetobacter sp. ADP1   5 5
No Yes Methylophaga sp. JAM1   3 3
No Yes Thioalkalimicrobium cyclicum ALM1   32 5
No Yes Francisella sp. TX077308   1 1
No Yes Francisella cf. novicida 3523   2 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   8 5
No Yes Acidilobus saccharovorans 345-15   3 2
No Yes Thermogladius cellulolyticus 1633   1 1
No Yes Ignisphaera aggregans DSM 17230   2 1
No Yes Metallosphaera cuprina Ar-4   3 1
No Yes Vulcanisaeta moutnovskia 768-28   2 1
No Yes Caldivirga maquilingensis IC-167   2 2
No Yes Pyrobaculum sp. 1860   2 2
No Yes Pyrobaculum calidifontis JCM 11548   2 2
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Pyrobaculum aerophilum str. IM2   2 2
No Yes Thermoproteus uzoniensis 768-20   1 1
No Yes Thermoproteus tenax Kra 1   4 3
No Yes halophilic archaeon DL31   1 1
No Yes Methanocella arvoryzae MRE50   10 6
No Yes Methanocella paludicola SANAE   3 2
No Yes Methanosaeta harundinacea 6Ac   40 18
No Yes Methanosaeta thermophila PT   16 10
No Yes Methanosaeta concilii GP6   22 15
No Yes Methanosalsum zhilinae DSM 4017   9 4
No Yes Methanohalobium evestigatum Z-7303   10 6
No Yes Methanococcoides burtonii DSM 6242   10 7
No Yes Methanosarcina acetivorans C2A   69 48
No Yes Methanosarcina mazei Go1   45 31
No Yes Methanosarcina barkeri str. Fusaro   65 47
No Yes Methanohalophilus mahii DSM 5219   11 5
No Yes Methanosphaerula palustris E1-9c   44 35
No Yes Methanoregula boonei 6A8   3 3
No Yes Methanospirillum hungatei JF-1   10 9
No Yes Methanocorpusculum labreanum Z   1 1
No Yes Methanoplanus petrolearius DSM 11571   8 5
No Yes Methanoculleus bourgensis MS2   10 7
No Yes Methanoculleus marisnigri JR1   3 3
No Yes Ferroglobus placidus DSM 10642   2 2
No Yes Archaeoglobus veneficus SNP6   7 1
No Yes Archaeoglobus fulgidus DSM 4304   6 4
No Yes Thermococcus sp. 4557   3 1
No Yes Thermococcus gammatolerans EJ3   3 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   5 1
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Picrophilus torridus DSM 9790   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   11 9
No Yes Halopiger xanaduensis SH-6   12 12
No Yes Haloterrigena turkmenica DSM 5511   19 18
No Yes Natrinema sp. J7-2   3 3
No Yes Natrialba magadii ATCC 43099   8 8
No Yes Halorubrum lacusprofundi ATCC 49239   2 2
No Yes Haloquadratum walsbyi DSM 16790   4 3
No Yes Halogeometricum borinquense DSM 11551   9 7
No Yes Haloferax mediterranei ATCC 33500   14 11
No Yes Haloferax volcanii DS2   11 8
No Yes Halomicrobium mukohataei DSM 12286   5 5
No Yes Halorhabdus utahensis DSM 12940   7 7
No Yes Natronomonas pharaonis DSM 2160   3 3
No Yes Haloarcula hispanica ATCC 33960   8 8
No Yes Haloarcula marismortui ATCC 43049   6 6
No Yes Halalkalicoccus jeotgali B3   14 14
No Yes Halobacterium salinarum R1   3 2
No Yes Halobacterium sp. NRC-1   2 1
No Yes Methanotorris igneus Kol 5   8 4
No Yes Methanocaldococcus sp. FS406-22   3 1
No Yes Methanocaldococcus vulcanius M7   5 2
No Yes Methanocaldococcus jannaschii DSM 2661   2 1
No Yes Methanothermococcus okinawensis IH1   2 2
No Yes Methanococcus maripaludis C5   5 3
No Yes Methanococcus voltae A3   18 12
No Yes Methanococcus vannielii SB   1 1
No Yes Methanothermus fervidus DSM 2088   7 6
No Yes Methanothermobacter marburgensis str. Marburg   9 6
No Yes Methanothermobacter thermautotrophicus str. Delta H   7 4
No Yes Methanosphaera stadtmanae DSM 3091   53 30
No Yes Methanobrevibacter sp. AbM4   31 16
No Yes Methanobrevibacter ruminantium M1   187 71
No Yes Methanobrevibacter smithii ATCC 35061   75 28
No Yes Complete genome sequence of Methanobacterium sp. Mb1   2 2
No Yes Aciduliprofundum sp. MAR08-339   13 5
No Yes Aciduliprofundum boonei T469   20 9
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 17 13
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 9 6
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 7 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 9 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 11 4
No Yes Cryptococcus neoformans var. grubii H99   4 4
No Yes Cryptococcus neoformans B-3501A   4 4
No Yes Cryptococcus neoformans JEC21   3 3
No Yes Paracoccidioides brasiliensis Pb01   8 4
No Yes Paracoccidioides brasiliensis Pb03   8 4
No Yes Coccidioides posadasii str. Silveira   2 1
No Yes Coccidioides immitis RMSCC 3703   3 2
No Yes Coccidioides immitis RMSCC 2394   3 2
No Yes Coccidioides immitis H538.4   4 3
No Yes Ajellomyces dermatitidis ER-3   6 3
No Yes Histoplasma capsulatum H143   10 5
No Yes Histoplasma capsulatum H88   13 7
No Yes Histoplasma capsulatum G186AR   8 4
No Yes Aspergillus fumigatus A1163   43 34
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Batrachochytrium dendrobatidis JAM81   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 110 110
No Yes Hordeum vulgare 22 Domesticated barley 162 162
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 113 113
No Yes Trypanosoma brucei Lister 427 v4.1   18 6
No Yes Chroococcidiopsis thermalis PCC 7203   32 14
No Yes Chamaesiphon minutus PCC 6605   5 3
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Cyanobium gracile PCC 6307   2 2
No Yes Dactylococcopsis salina PCC 8305   32 14
No Yes Synechococcus sp. JA-2-3B'a(2-13)   3 3
No Yes Synechococcus sp. JA-3-3Ab   4 3
No Yes Synechococcus sp. CC9902   2 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Crinalium epipsammum PCC 9333   8 7
No Yes Oscillatoria nigro-viridis PCC 7112   26 17
No Yes Oscillatoria acuminata PCC 6304   79 41
No Yes Arthrospira platensis NIES-39   17 11
No Yes Cyanothece sp. PCC 7822   42 20
No Yes Cyanothece sp. PCC 7425   3 2
No Yes Cyanothece sp. PCC 7424   21 9
No Yes Cyanothece sp. ATCC 51142   13 5
No Yes Cyanothece sp. PCC 8801   6 3
No Yes Cyanobacterium aponinum PCC 10605   8 7
No Yes Cyanobacterium stanieri PCC 7202   4 3
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   3 3
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   28 7
No Yes Stanieria cyanosphaera PCC 7437   30 12
No Yes Calothrix parietina Calothrix sp. PCC 6303   71 26
No Yes Cylindrospermum stagnale PCC 7417   23 15
No Yes Anabaena cylindrica PCC 7122   52 22
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Frankia sp. EuI1c   8 7
No Yes Frankia sp. CcI3   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   8 4
No Yes Streptomyces albus J1074   8 6
No Yes Streptomyces rapamycinicus NRRL 5491   25 24
No Yes Streptomyces davawensis JCM 4913   22 20
No Yes Streptomyces fulvissimus DSM 40593   18 14
No Yes Streptomyces venezuelae ATCC 10712   23 19
No Yes Streptomyces collinus Tu 365   9 7
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   13 7
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   15 12
No Yes Saccharothrix espanaensis DSM 44229   3 3
No Yes Amycolatopsis mediterranei RB   30 29
No Yes Amycolatopsis mediterranei S699   30 29
No Yes Amycolatopsis mediterranei S699   30 29
No Yes Amycolatopsis orientalis HCCB10007   17 16
No Yes Propionibacterium acnes ATCC 11828   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn31   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn17   2 1
No Yes Propionibacterium acnes TypeIA2 P.acn33   1 1
No Yes Propionibacterium acnes C1   1 1
No Yes Propionibacterium acnes HL096PA1   1 1
No Yes Propionibacterium acnes 6609   1 1
No Yes Propionibacterium acnes 266   2 1
No Yes Propionibacterium acnes KPA171202   1 1
No Yes Propionibacterium acidipropionici ATCC 4875   5 5
No Yes Actinoplanes friuliensis DSM 7358   26 23
No Yes Nocardia brasiliensis ATCC 700358   4 4
No Yes Mycobacterium sp. MOTT36Y   7 1
No Yes Mycobacterium sp. KMS   4 3
No Yes Mycobacterium sp. MCS   4 3
No Yes Mycobacterium yongonense 05-1390   6 1
No Yes Mycobacterium gilvum Spyr1   2 2
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   1 1
No Yes Corynebacterium glutamicum MB001   1 1
No Yes Corynebacterium glutamicum SCgG2   2 2
No Yes Corynebacterium glutamicum SCgG1   2 2
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   3 3
No Yes Clavibacter michiganensis subsp. sepedonicus   5 5
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   9 6
No Yes Gardnerella vaginalis HMP9231   1 1
No Yes Gardnerella vaginalis ATCC 14019   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   2 2
No Yes Bifidobacterium longum subsp. longum KACC 91563   2 2
No Yes Bifidobacterium longum subsp. longum BBMN68   2 2
No Yes Bifidobacterium longum subsp. longum F8   1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   2 2
No Yes Bifidobacterium animalis subsp. lactis Bl12   1 1
No Yes Bifidobacterium animalis subsp. lactis B420   1 1
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   1 1
No Yes Bifidobacterium animalis subsp. lactis BLC1   1 1
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   1 1
No Yes Bifidobacterium animalis subsp. lactis Bi-07   1 1
No Yes Bifidobacterium animalis subsp. lactis V9   1 1
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   1 1
No Yes Bifidobacterium animalis subsp. lactis BB-12   1 1
No Yes Bifidobacterium animalis subsp. lactis AD011   1 1
No Yes Bifidobacterium asteroides PRL2011   4 3
No Yes Bifidobacterium bifidum PRL2010   2 2
No Yes Bifidobacterium bifidum BGN4   3 2
No Yes Actinomyces graevenitzii C83   1 1
No Yes Actinomyces viscosus C505   1 1
No Yes Dehalococcoides mccartyi DCMB5   1 1
No Yes Dehalococcoides mccartyi BTF08   1 1
No Yes Dehalococcoides sp. GT   1 1
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Chthonomonas calidirosea T49   8 7
No Yes Deinococcus peraridilitoris DSM 19664   18 17
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   2 2
No Yes Clostridium thermocellum DSM 1313   10 9
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   6 5
No Yes Faecalibacterium prausnitzii L2-6   4 4
No Yes Ruminococcus champanellensis 18P13   8 7
No Yes Sulfobacillus acidophilus TPY   2 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   3 2
No Yes Desulfitobacterium hafniense DCB-2   4 4
No Yes Desulfotomaculum gibsoniae DSM 7213   1 1
No Yes Clostridium difficile BI1   3 3
No Yes Clostridium difficile R20291   3 3
No Yes Clostridium difficile CD196   3 3
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Roseburia intestinalis XB6B4   7 6
No Yes Clostridium sp. SY8519   5 3
No Yes Clostridium saccharobutylicum DSM 13864   7 7
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   15 14
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium pasteurianum BC1   4 2
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   3 2
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium acetobutylicum DSM 1731   16 14
No Yes Clostridium acetobutylicum EA 2018   16 14
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   4 3
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   2 2
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Melissococcus plutonius ATCC 35311   6 6
No Yes Enterococcus mundtii QU 25   5 5
No Yes Enterococcus casseliflavus EC20   2 2
No Yes Enterococcus faecium Aus0085   4 4
No Yes Enterococcus faecium NRRL B-2354   6 6
No Yes Enterococcus faecium DO   4 4
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   3 2
No Yes Enterococcus faecalis OG1RF   3 2
No Yes Enterococcus faecalis V583   2 2
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus rhamnosus LOCK908   3 3
No Yes Lactobacillus rhamnosus LOCK900   2 2
No Yes Lactobacillus rhamnosus ATCC 8530   3 3
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus johnsonii N6.2   3 3
No Yes Lactobacillus johnsonii DPC 6026   3 3
No Yes Lactobacillus johnsonii NCC 533   3 3
No Yes Lactobacillus amylovorus GRL 1112   2 2
No Yes Lactobacillus reuteri TD1   1 1
No Yes Lactobacillus reuteri JCM 1112   1 1
No Yes Lactobacillus reuteri SD2112   1 1
No Yes Lactobacillus plantarum 16   2 2
No Yes Lactobacillus plantarum ZJ316   3 3
No Yes Lactobacillus plantarum subsp. plantarum ST-III   2 2
No Yes Lactobacillus plantarum subsp. plantarum P-8   2 2
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactobacillus helveticus R0052   1 1
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus helveticus CNRZ32   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   2 2
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   2 2
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   2 2
No Yes Lactobacillus brevis KB290   3 3
No Yes Lactobacillus acidophilus La-14   2 2
No Yes Lactobacillus acidophilus NCFM   2 2
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   4 4
No Yes Lactococcus lactis subsp. lactis IO-1   1 1
No Yes Lactococcus lactis subsp. lactis CV56   2 2
No Yes Lactococcus lactis subsp. lactis Il1403   2 2
No Yes Lactococcus lactis subsp. cremoris A76   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   3 3
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   3 3
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   1 1
No Yes Streptococcus iniae SF1   1 1
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus pyogenes HSC5   1 1
No Yes Streptococcus pyogenes A20   1 1
No Yes Streptococcus pyogenes MGAS1882   1 1
No Yes Streptococcus pyogenes MGAS15252   1 1
No Yes Streptococcus pyogenes Alab49   1 1
No Yes Streptococcus pyogenes MGAS10750   1 1
No Yes Streptococcus pyogenes MGAS10270   1 1
No Yes Streptococcus pyogenes MGAS2096   1 1
No Yes Streptococcus pyogenes MGAS9429   1 1
No Yes Streptococcus pyogenes MGAS6180   1 1
No Yes Streptococcus pyogenes NZ131   1 1
No Yes Streptococcus pyogenes MGAS8232   1 1
No Yes Streptococcus pyogenes MGAS10394   1 1
No Yes Streptococcus pyogenes MGAS315   1 1
No Yes Streptococcus pyogenes SSI-1   1 1
No Yes Streptococcus pyogenes M1 476   1 1
No Yes Streptococcus pyogenes MGAS5005   1 1
No Yes Streptococcus pyogenes M1 GAS   1 1
No Yes Streptococcus pneumoniae A026   2 1
No Yes Streptococcus pneumoniae ST556   2 1
No Yes Streptococcus pneumoniae SPN994039   2 1
No Yes Streptococcus pneumoniae SPN994038   2 1
No Yes Streptococcus pneumoniae SPN034183   2 1
No Yes Streptococcus pneumoniae SPN034156   2 1
No Yes Streptococcus pneumoniae INV104   2 1
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae OXC141   2 1
No Yes Streptococcus pneumoniae gamPNI0373   2 1
No Yes Streptococcus pneumoniae AP200   2 1
No Yes Streptococcus pneumoniae ATCC 700669   2 1
No Yes Streptococcus pneumoniae TCH8431/19A   2 1
No Yes Streptococcus pneumoniae CGSP14   2 1
No Yes Streptococcus pneumoniae G54   2 1
No Yes Streptococcus pneumoniae JJA   2 1
No Yes Streptococcus pneumoniae 70585   1 1
No Yes Streptococcus pneumoniae Hungary19A-6   2 1
No Yes Streptococcus pneumoniae Taiwan19F-14   2 1
No Yes Streptococcus pneumoniae D39   2 1
No Yes Streptococcus pneumoniae 670-6B   2 1
No Yes Streptococcus pneumoniae R6   2 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus mutans GS-5   1 1
No Yes Streptococcus mutans LJ23   1 1
No Yes Streptococcus mutans UA159   1 1
No Yes Streptococcus suis T15   3 3
No Yes Streptococcus suis SC070731   2 2
No Yes Streptococcus suis S735   2 2
No Yes Streptococcus suis ST3   2 2
No Yes Streptococcus suis D9   1 1
No Yes Streptococcus suis SS12   2 2
No Yes Streptococcus suis A7   2 2
No Yes Streptococcus suis JS14   2 2
No Yes Streptococcus suis BM407   2 2
No Yes Streptococcus suis SC84   2 2
No Yes Streptococcus suis GZ1   2 2
No Yes Streptococcus suis 98HAH33   2 2
No Yes Streptococcus suis 05ZYH33   2 2
No Yes Streptococcus salivarius CCHSS3   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Exiguobacterium antarcticum B7   3 3
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Thermobacillus composti KWC4   4 3
No Yes Paenibacillus sp. Y412MC10   16 16
No Yes Paenibacillus mucilaginosus KNP414   40 35
No Yes Paenibacillus mucilaginosus K02   39 34
No Yes Paenibacillus larvae subsp. larvae DSM 25430   2 2
No Yes Paenibacillus polymyxa CR1   15 13
No Yes Paenibacillus polymyxa SC2   13 11
No Yes Paenibacillus polymyxa E681   13 11
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes M7   2 2
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes L99   2 2
No Yes Listeria monocytogenes HCC23   2 2
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Amphibacillus xylanus NBRC 15112   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   10 8
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   11 7
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   8 6
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   11 9
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   7 5
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   7 5
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   8 7
No Yes Bacillus amyloliquefaciens LFB112   8 6
No Yes Bacillus amyloliquefaciens CC178   7 6
No Yes Bacillus amyloliquefaciens Y2   12 9
No Yes Bacillus amyloliquefaciens IT-45   7 6
No Yes Bacillus amyloliquefaciens XH7   13 10
No Yes Bacillus amyloliquefaciens LL3   12 9
No Yes Bacillus amyloliquefaciens TA208   13 10
No Yes Bacillus amyloliquefaciens DSM 7   12 9
No Yes Bacillus licheniformis 9945A   11 10
No Yes Bacillus subtilis PY79   8 6
No Yes Bacillus subtilis XF-1   6 5
No Yes Bacillus subtilis QB928   11 8
No Yes Bacillus subtilis BSn5   8 6
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   6 5
No Yes Bacillus subtilis subsp. subtilis str. BSP1   6 5
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   7 6
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   11 8
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   7 6
No Yes Bacillus subtilis subsp. spizizenii str. W23   8 6
No Yes Bacillus subtilis subsp. natto BEST195   6 5
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   13 11
No Yes Bacillus infantis NRRL B-14911   9 8
No Yes Bacillus toyonensis BCT-7112   2 1
No Yes Bacillus thuringiensis HD-771   2 2
No Yes Bacillus thuringiensis HD-789   3 3
No Yes Bacillus thuringiensis MC28   5 5
No Yes Bacillus thuringiensis serovar chinensis CT-43   2 2
No Yes Bacillus thuringiensis YBT-1518   4 4
No Yes Bacillus thuringiensis Bt407   2 2
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   2 2
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   3 3
No Yes Bacillus thuringiensis BMB171   2 2
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   2 2
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   2 2
No Yes Bacillus cereus AH820   4 3
No Yes Bacillus cereus B4264   2 2
No Yes Bacillus cereus G9842   2 2
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus ATCC 14579   2 2
No Yes Bacillus anthracis str. H9401   2 2
No Yes Bacillus anthracis str. CDC 684   2 2
No Yes Bacillus anthracis str. 'Ames Ancestor'   2 2
No Yes Bacillus anthracis str. Sterne   2 2
No Yes Bacillus anthracis str. Ames   2 2
No Yes Bacillus megaterium WSH-002   3 3
No Yes Bacillus megaterium QM B1551   2 2
No Yes Bacillus coagulans 36D1   1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   1 1
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus pasteuri SP1   2 2
No Yes Staphylococcus lugdunensis N920143   2 2
No Yes Staphylococcus warneri SG1   2 2
No Yes Staphylococcus epidermidis ATCC 12228   1 1
No Yes Staphylococcus aureus CA-347   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus M1   1 1
No Yes Staphylococcus aureus 08BA02176   1 1
No Yes Staphylococcus aureus ST228/18412   1 1
No Yes Staphylococcus aureus ST228/18341   1 1
No Yes Staphylococcus aureus ST228/16125   1 1
No Yes Staphylococcus aureus ST228/16035   1 1
No Yes Staphylococcus aureus ST228/15532   1 1
No Yes Staphylococcus aureus ST228/10497   1 1
No Yes Staphylococcus aureus ST228/10388   1 1
No Yes Staphylococcus aureus 04-02981   1 1
No Yes Staphylococcus aureus RF122   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus 6850   1 1
No Yes Staphylococcus aureus subsp. aureus SA957   1 1
No Yes Staphylococcus aureus subsp. aureus CN1   1 1
No Yes Staphylococcus aureus subsp. aureus SA40   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus M013   1 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   1 1
No Yes Staphylococcus aureus subsp. aureus VC40   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   1 1
No Yes Staphylococcus aureus subsp. aureus LGA251   1 1
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   1 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   1 1
No Yes Staphylococcus aureus subsp. aureus ED133   1 1
No Yes Staphylococcus aureus subsp. aureus ED98   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   1 1
No Yes Staphylococcus aureus subsp. aureus TCH60   1 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   1 1
No Yes Staphylococcus aureus subsp. aureus 71193   1 1
No Yes Staphylococcus aureus subsp. aureus S0385   1 1
No Yes Staphylococcus aureus subsp. aureus str. Newman   1 1
No Yes Staphylococcus aureus subsp. aureus Mu3   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   1 1
No Yes Staphylococcus aureus subsp. aureus JH9   1 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   1 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   1 1
No Yes Staphylococcus aureus subsp. aureus MW2   1 1
No Yes Staphylococcus aureus subsp. aureus N315   1 1
No Yes Staphylococcus aureus subsp. aureus Mu50   1 1
No Yes Staphylococcus aureus subsp. aureus COL   1 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   1 1
No Yes Salinibacter ruber DSM 13855   2 2
No Yes Rhodothermus marinus SG0.5JP17-172   8 8
No Yes Echinicola vietnamensis DSM 17526   29 29
No Yes Emticicia oligotrophica DSM 17448   7 7
No Yes Prevotella sp. oral taxon 299 str. F0039   2 2
No Yes Prevotella dentalis DSM 3688   15 14
No Yes Porphyromonas gingivalis TDC60   2 2
No Yes Porphyromonas gingivalis W83   2 2
No Yes Alistipes shahii WAL 8301   8 8
No Yes Bacteroides xylanisolvens XB1A   30 30
No Yes Bacteroides fragilis 638R   6 6
No Yes Bacteroides fragilis NCTC 9343   6 6
No Yes Nonlabens dokdonensis DSW-6   15 6
No Yes Psychroflexus torquis ATCC 700755   5 4
No Yes Riemerella anatipestifer RA-CH-2   3 3
No Yes Riemerella anatipestifer RA-CH-1   4 4
No Yes Riemerella anatipestifer RA-GD   2 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   4 4
No Yes Fibrobacter succinogenes subsp. succinogenes S85   14 14
No Yes Chlamydia pecorum P787   4 4
No Yes Chlamydia pecorum W73   4 4
No Yes Chlamydia pecorum PV3056/3   5 5
No Yes Chlamydophila pneumoniae LPCoLN   5 3
No Yes Chlamydophila pneumoniae J138   6 4
No Yes Chlamydophila pneumoniae CWL029   4 3
No Yes Chlamydophila pneumoniae AR39   5 4
No Yes Chlamydia psittaci 01DC12   2 2
No Yes Chlamydia psittaci WS/RT/E30   2 2
No Yes Chlamydia psittaci VS225   3 3
No Yes Chlamydia psittaci MN   3 3
No Yes Chlamydia psittaci GR9   1 1
No Yes Chlamydia psittaci 84/55   1 1
No Yes Chlamydia psittaci 08DC60   2 2
No Yes Chlamydia psittaci 02DC15   2 2
No Yes Chlamydia psittaci C19/98   2 2
No Yes Chlamydia psittaci CP3   4 4
No Yes Chlamydophila psittaci RD1   2 2
No Yes Chlamydia psittaci Mat116   1 1
No Yes Chlamydophila psittaci 6BC   2 2
No Yes Chlamydophila psittaci 6BC   2 2
No Yes Chlamydia trachomatis C/TW-3   1 1
No Yes Chlamydia trachomatis L2/434/Bu(f)   2 2
No Yes Chlamydia trachomatis L2/434/Bu(i)   2 2
No Yes Chlamydia trachomatis IU888   1 1
No Yes Chlamydia trachomatis IU824   1 1
No Yes Chlamydia trachomatis L2b/Canada2   2 2
No Yes Chlamydia trachomatis L2b/Canada1   2 2
No Yes Chlamydia trachomatis L3/404/LN   2 2
No Yes Chlamydia trachomatis L2b/Ams5   2 2
No Yes Chlamydia trachomatis L2b/Ams4   2 2
No Yes Chlamydia trachomatis L2b/Ams3   2 2
No Yes Chlamydia trachomatis L2b/Ams2   2 2
No Yes Chlamydia trachomatis L2b/Ams1   2 2
No Yes Chlamydia trachomatis L2b/795   2 2
No Yes Chlamydia trachomatis L2b/CV204   2 2
No Yes Chlamydia trachomatis L2b/LST   2 2
No Yes Chlamydia trachomatis L2b/UCH-2   2 2
No Yes Chlamydia trachomatis L2b/8200/07   2 2
No Yes Chlamydia trachomatis L2/25667R   2 2
No Yes Chlamydia trachomatis L1/224   2 2
No Yes Chlamydia trachomatis L1/115   2 2
No Yes Chlamydia trachomatis L1/440/LN   2 2
No Yes Chlamydia trachomatis K/SotonK1   1 1
No Yes Chlamydia trachomatis Ia/SotonIa3   1 1
No Yes Chlamydia trachomatis Ia/SotonIa1   1 1
No Yes Chlamydia trachomatis G/SotonG1   1 1
No Yes Chlamydia trachomatis F/SotonF3   1 1
No Yes Chlamydia trachomatis F/SW5   1 1
No Yes Chlamydia trachomatis F/SW4   1 1
No Yes Chlamydia trachomatis E/SotonE8   1 1
No Yes Chlamydia trachomatis E/SotonE4   1 1
No Yes Chlamydia trachomatis E/SW3   1 1
No Yes Chlamydia trachomatis D/SotonD6   1 1
No Yes Chlamydia trachomatis D/SotonD5   1 1
No Yes Chlamydia trachomatis D/SotonD1   1 1
No Yes Chlamydia trachomatis A/5291   1 1
No Yes Chlamydia trachomatis A/363   1 1
No Yes Chlamydia trachomatis RC-J/971   2 2
No Yes Chlamydia trachomatis RC-L2/55   2 2
No Yes Chlamydia trachomatis J/6276tet1   1 1
No Yes Chlamydia trachomatis RC-J/966   2 2
No Yes Chlamydia trachomatis RC-J(s)/122   2 2
No Yes Chlamydia trachomatis RC-F(s)/342   1 1
No Yes Chlamydia trachomatis RC-L2(s)/3   2 2
No Yes Chlamydia trachomatis RC-J/953   2 2
No Yes Chlamydia trachomatis RC-J943   2 2
No Yes Chlamydia trachomatis RC-Fs852   1 1
No Yes Chlamydia trachomatis RC-L2s46   2 2
No Yes Chlamydia trachomatis RC-F69   2 2
No Yes Chlamydia trachomatis L2c   2 2
No Yes Chlamydia trachomatis D-LC   1 1
No Yes Chlamydia trachomatis D-EC   1 1
No Yes Chlamydia trachomatis G/9301   1 1
No Yes Chlamydia trachomatis G/11074   1 1
No Yes Chlamydia trachomatis G/11222   1 1
No Yes Chlamydia trachomatis G/9768   1 1
No Yes Chlamydia trachomatis E/150   1 1
No Yes Chlamydia trachomatis E/11023   1 1
No Yes Chlamydia trachomatis B/TZ1A828/OT   1 1
No Yes Chlamydia trachomatis Sweden2   1 1
No Yes Chlamydia trachomatis E/Bour   1 1
No Yes Chlamydia trachomatis A2497   1 1
No Yes Chlamydia trachomatis A2497   1 1
No Yes Chlamydia trachomatis L2b/UCH-1/proctitis   2 2
No Yes Chlamydia trachomatis 434/Bu   2 2
No Yes Chlamydia trachomatis A/HAR-13   1 1
No Yes Chlamydia trachomatis D/UW-3/CX   1 1
No Yes Singulisphaera acidiphila DSM 18658   22 19
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   3 3
No Yes Leptospira interrogans serovar Lai str. 56601   7 7
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   6 6
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   4 4
No Yes Borrelia afzelii PKo   1 1
No Yes Borrelia burgdorferi JD1   2 2
No Yes Borrelia burgdorferi ZS7   1 1
No Yes Treponema pedis str. T A4   5 4
No Yes Spirochaeta thermophila DSM 6578   4 4
No Yes Thermotoga maritima MSB8   2 2
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   4 4
No Yes Fusobacterium nucleatum subsp. animalis 4_8   6 6
No Yes Bdellovibrio bacteriovorus str. Tiberius   3 3
No Yes Arcobacter butzleri ED-1   4 4
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   3 3
No Yes Campylobacter jejuni RM1221   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2544   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2538   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2426   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2425   2 2
No Yes Campylobacter jejuni subsp. jejuni PT14   2 2
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   3 3
No Yes Campylobacter jejuni subsp. jejuni S3   2 2
No Yes Campylobacter jejuni subsp. jejuni M1   3 3
No Yes Campylobacter jejuni subsp. jejuni IA3902   2 2
No Yes Campylobacter jejuni subsp. jejuni 81116   3 3
No Yes Campylobacter jejuni subsp. jejuni 81-176   5 5
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   2 2
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   1 1
No Yes Campylobacter coli 76339   5 5
No Yes Campylobacter coli CVM N29710   2 2
No Yes Desulfocapsa sulfexigens DSM 10523   3 3
No Yes Desulfobacula toluolica Tol2   4 3
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   2 2
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   3 3
No Yes Desulfovibrio desulfuricans ND132   2 2
No Yes Geobacter sp. M18   6 5
No Yes Geobacter sulfurreducens PCA   7 5
No Yes Sorangium cellulosum So0157-2   33 30
No Yes Anaeromyxobacter sp. K   8 7
No Yes Anaeromyxobacter dehalogenans 2CP-C   11 11
No Yes Myxococcus stipitatus DSM 14675   25 21
No Yes Neisseria meningitidis WUE 2594   5 5
No Yes Neisseria meningitidis G2136   4 4
No Yes Neisseria meningitidis M04-240196   7 7
No Yes Neisseria meningitidis M01-240149   8 8
No Yes Neisseria meningitidis NZ-05/33   7 7
No Yes Neisseria meningitidis M01-240355   10 10
No Yes Neisseria meningitidis 8013   6 6
No Yes Neisseria meningitidis 053442   3 3
No Yes Neisseria meningitidis Z2491   6 6
No Yes Neisseria meningitidis H44/76   9 9
No Yes Neisseria meningitidis alpha710   8 8
No Yes Neisseria meningitidis MC58   10 10
No Yes Neisseria gonorrhoeae TCDC-NG08107   7 7
No Yes Neisseria gonorrhoeae FA 1090   5 5
No Yes Burkholderia phenoliruptrix BR3459a   8 8
No Yes Pandoraea pnomenusa 3kgm   7 7
No Yes Ralstonia pickettii 12J   5 4
No Yes Ralstonia solanacearum FQY_4   16 15
No Yes Ralstonia solanacearum Po82   14 14
No Yes Ralstonia solanacearum PSI07   14 12
No Yes Ralstonia solanacearum CMR15   12 12
No Yes Ralstonia solanacearum GMI1000   18 18
No Yes Polynucleobacter necessarius subsp. necessarius STIR1   1 1
No Yes Burkholderia sp. YI23   9 8
No Yes Burkholderia sp. CCGE1003   12 11
No Yes Burkholderia sp. CCGE1001   7 7
No Yes Burkholderia sp. KJ006   13 9
No Yes Burkholderia thailandensis MSMB121   5 5
No Yes Burkholderia pseudomallei MSHR305   6 6
No Yes Burkholderia pseudomallei NCTC 13179   7 7
No Yes Burkholderia pseudomallei BPC006   6 6
No Yes Burkholderia pseudomallei 1026b   6 6
No Yes Burkholderia pseudomallei MSHR346   3 3
No Yes Burkholderia pseudomallei 668   6 6
No Yes Burkholderia pseudomallei 1710b   6 6
No Yes Burkholderia pseudomallei K96243   5 5
No Yes Burkholderia mallei NCTC 10229   3 3
No Yes Burkholderia mallei NCTC 10247   3 3
No Yes Burkholderia mallei ATCC 23344   4 4
No Yes Burkholderia lata   15 10
No Yes Burkholderia ambifaria MC40-6   24 15
No Yes Burkholderia cenocepacia MC0-3   18 6
No Yes Burkholderia cenocepacia AU 1054   12 5
No Yes Burkholderia cenocepacia J2315   20 9
No Yes Burkholderia multivorans ATCC 17616   18 8
No Yes Burkholderia cepacia GG4   8 4
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   3 2
No Yes Alicycliphilus denitrificans BC   1 1
No Yes Variovorax paradoxus B4   6 5
No Yes Variovorax paradoxus EPS   15 6
No Yes Taylorella asinigenitalis 14/45   3 2
No Yes Taylorella equigenitalis 14/56   3 2
No Yes Taylorella equigenitalis ATCC 35865   3 2
No Yes Bordetella pertussis CS   18 12
No Yes Bordetella parapertussis 18323   15 9
No Yes Bordetella parapertussis Bpp5   20 9
No Yes Bordetella bronchiseptica MO149   24 15
No Yes Bordetella bronchiseptica 253   22 11
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   17 15
No Yes Sulfuricella denitrificans skB26   7 6
No Yes Caulobacter crescentus CB15   4 4
No Yes Zymomonas mobilis subsp. mobilis CP4   6 3
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Leisingera methylohalidivorans DSM 14336   2 2
No Yes Octadecabacter antarcticus 307   1 1
No Yes Rhodobacter sphaeroides KD131   3 3
No Yes Rhodobacter sphaeroides ATCC 17025   3 3
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   3 3
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   6 5
No Yes Rhodospirillum rubrum ATCC 11170   3 2
No Yes Gluconacetobacter diazotrophicus PAl 5   5 5
No Yes Gluconobacter oxydans H24   3 3
No Yes Acetobacter pasteurianus 386B   2 2
No Yes Acetobacter pasteurianus IFO 3283-12   1 1
No Yes Acetobacter pasteurianus IFO 3283-01-42C   1 1
No Yes Acetobacter pasteurianus IFO 3283-32   1 1
No Yes Acetobacter pasteurianus IFO 3283-26   1 1
No Yes Acetobacter pasteurianus IFO 3283-22   1 1
No Yes Acetobacter pasteurianus IFO 3283-07   1 1
No Yes Acetobacter pasteurianus IFO 3283-03   1 1
No Yes Micavibrio aeruginosavorus EPB   11 4
No Yes Anaplasma phagocytophilum str. Dog2   1 1
No Yes Anaplasma phagocytophilum str. HZ2   1 1
No Yes Anaplasma phagocytophilum str. JM   1 1
No Yes Methylobacterium extorquens DM4   6 5
No Yes Methylobacterium extorquens PA1   9 9
No Yes Brucella ceti TE10759-12   10 3
No Yes Brucella ceti TE28753-12   7 3
No Yes Brucella canis HSK A52141   18 6
No Yes Brucella suis VBI22   15 5
No Yes Brucella suis 1330   16 5
No Yes Brucella suis 1330   16 5
No Yes Brucella melitensis NI   16 9
No Yes Brucella melitensis M5-90   16 9
No Yes Brucella melitensis M28   16 9
No Yes Brucella melitensis bv. 1 str. 16M   17 7
No Yes Brucella abortus A13334   19 6
No Yes Brucella melitensis biovar Abortus 2308   9 2
No Yes Brucella abortus bv. 1 str. 9-941   14 4
No Yes Sinorhizobium fredii USDA 257   6 6
No Yes Sinorhizobium fredii HH103   6 5
No Yes Sinorhizobium meliloti 2011   3 3
No Yes Sinorhizobium meliloti GR4   4 4
No Yes Sinorhizobium meliloti Rm41   9 8
No Yes Sinorhizobium meliloti SM11   9 8
No Yes Sinorhizobium meliloti BL225C   5 5
No Yes Sinorhizobium meliloti 1021   4 4
No Yes Rhizobium etli CFN 42   11 11
No Yes Rhizobium etli bv. mimosae str. Mim1   10 10
No Yes Rhizobium tropici CIAT 899   5 4
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   13 13
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   12 11
No Yes Mesorhizobium australicum WSM2073   5 4
No Yes Hyphomicrobium nitrativorans NL23   12 12
No Yes Hyphomicrobium denitrificans 1NES1   5 4
No Yes Oligotropha carboxidovorans OM5   5 4
No Yes Oligotropha carboxidovorans OM5   5 4
No Yes Rhodopseudomonas palustris DX-1   6 4
No Yes Rhodopseudomonas palustris TIE-1   9 5
No Yes Rhodopseudomonas palustris HaA2   10 8
No Yes Rhodopseudomonas palustris BisB5   2 2
No Yes Rhodopseudomonas palustris BisB18   5 5
No Yes Rhodopseudomonas palustris CGA009   11 7
No Yes Bradyrhizobium sp. S23321   11 8
No Yes Bradyrhizobium sp. BTAi1   7 6
No Yes Bradyrhizobium oligotrophicum S58   13 10
No Yes Bradyrhizobium japonicum USDA 6   11 10
No Yes Bartonella australis Aust/NH1   14 12
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   11 10
No Yes Bartonella quintana RM-11   8 6
No Yes Simiduia agarivorans SA1 = DSM 21679   14 12
No Yes Mannheimia succiniciproducens MBEL55E   2 2
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   6 6
No Yes Haemophilus somnus 2336   4 4
No Yes Mannheimia haemolytica USMARC_2286   10 9
No Yes Mannheimia haemolytica M42548   11 10
No Yes Mannheimia haemolytica D174   8 8
No Yes Mannheimia haemolytica D171   7 7
No Yes Mannheimia haemolytica D153   10 9
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   9 8
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   7 6
No Yes Pasteurella multocida 36950   2 2
No Yes Pasteurella multocida subsp. multocida str. HN06   2 2
No Yes Pasteurella multocida subsp. multocida str. Pm70   3 3
No Yes Haemophilus parasuis ZJ0906   2 2
No Yes Haemophilus influenzae KR494   3 3
No Yes Haemophilus influenzae F3047   5 5
No Yes Haemophilus influenzae F3031   4 4
No Yes Haemophilus influenzae 10810   3 3
No Yes Haemophilus influenzae 86-028NP   6 6
No Yes Haemophilus influenzae R2866   3 3
No Yes Haemophilus influenzae R2846   5 5
No Yes Haemophilus influenzae Rd KW20   2 2
No Yes Actinobacillus suis H91-0380   5 4
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   1 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio nigripulchritudo VibrioScope   3 3
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   2 2
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella sp. MR-7   2 2
No Yes Shewanella putrefaciens 200   2 2
No Yes Glaciecola psychrophila 170   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   4 3
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   5 4
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   6 5
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   8 7
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   4 3
No Yes Alteromonas macleodii str. 'English Channel 615'   5 5
No Yes Alteromonas macleodii AltDE1   4 3
No Yes Alteromonas macleodii str. 'English Channel 673'   11 10
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   9 8
No Yes Alteromonas macleodii str. 'Black Sea 11'   13 11
No Yes Alteromonas macleodii ATCC 27126   13 11
No Yes Alcanivorax dieselolei B5   13 9
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Stenotrophomonas maltophilia D457   16 7
No Yes Stenotrophomonas maltophilia JV3   20 8
No Yes Stenotrophomonas maltophilia R551-3   16 8
No Yes Xylella fastidiosa subsp. fastidiosa GB514   3 3
No Yes Xylella fastidiosa M12   2 2
No Yes Xylella fastidiosa Temecula1   4 4
No Yes Xylella fastidiosa 9a5c   4 4
No Yes Xanthomonas citri subsp. citri Aw12879   21 11
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   21 11
No Yes Xanthomonas axonopodis pv. citrumelo F1   16 6
No Yes Xanthomonas axonopodis Xac29-1   19 10
No Yes Xanthomonas oryzae pv. oryzicola BLS256   14 8
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   14 8
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   14 7
No Yes Xanthomonas campestris pv. raphani 756C   23 13
No Yes Xanthomonas campestris pv. campestris str. 8004   21 12
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   21 12
No Yes Thioalkalivibrio nitratireducens DSM 14787   1 1
No Yes Legionella pneumophila str. Paris   7 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Proteus mirabilis BB2000   8 8
No Yes Morganella morganii subsp. morganii KT   12 11
No Yes Edwardsiella tarda C07-087   6 5
No Yes Edwardsiella tarda FL6-60   4 4
No Yes Rahnella aquatilis HX2   15 14
No Yes Yersinia pseudotuberculosis PB1/+   17 16
No Yes Yersinia pseudotuberculosis YPIII   16 15
No Yes Yersinia pseudotuberculosis IP 32953   19 18
No Yes Yersinia pestis biovar Microtus str. 91001   15 15
No Yes Yersinia pestis A1122   18 17
No Yes Yersinia pestis Z176003   19 18
No Yes Yersinia pestis D182038   18 17
No Yes Yersinia pestis D106004   18 17
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   16 16
No Yes Yersinia pestis Nepal516   19 18
No Yes Yersinia pestis Antiqua   18 17
No Yes Yersinia pestis Angola   9 9
No Yes Yersinia pestis CO92   16 15
No Yes Yersinia pestis KIM10+   19 18
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   9 9
No Yes Yersinia enterocolitica subsp. palearctica Y11   10 10
No Yes Serratia sp. AS13   10 9
No Yes Serratia plymuthica S13   9 9
No Yes Serratia plymuthica 4Rx13   9 8
No Yes Serratia marcescens FGI94   6 4
No Yes Serratia marcescens WW4   7 6
No Yes Serratia liquefaciens ATCC 27592   8 8
No Yes Dickeya dadantii Ech586   18 18
No Yes Dickeya dadantii 3937   23 23
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   19 19
No Yes Pantoea ananatis LMG 5342   8 8
No Yes Pantoea ananatis PA13   8 8
No Yes Pantoea ananatis AJ13355   10 10
No Yes Erwinia pyrifoliae DSM 12163   7 7
No Yes Erwinia amylovora CFBP1430   7 7
No Yes Cronobacter sakazakii CMCC 45402   10 10
No Yes Cronobacter sakazakii SP291   7 6
No Yes Cronobacter sakazakii ATCC BAA-894   6 6
No Yes Raoultella ornithinolytica B6   4 4
No Yes Shigella sonnei 53G   12 11
No Yes Shigella flexneri 2002017   15 14
No Yes Shigella flexneri 2a str. 2457T   11 10
No Yes Shigella flexneri 2a str. 301   13 12
No Yes Shigella dysenteriae 1617   10 10
No Yes Shigella boydii Sb227   8 8
No Yes Salmonella bongori N268-08   12 9
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   5 5
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   7 5
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   9 5
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   4 4
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   15 7
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   8 5
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   5 5
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   7 5
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   7 5
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   10 7
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   9 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   8 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   7 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   7 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   9 6
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   7 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   8 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   7 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   7 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   7 5
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   9 6
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   3 3
No Yes Salmonella enterica serovar Bovismorbificans genomics   4 4
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   7 5
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   13 6
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   12 6
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   5 5
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   8 5
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   5 5
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   5 5
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   10 6
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   10 6
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   10 6
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   5 5
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   5 5
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   9 5
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   8 4
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   7 5
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   4 4
No Yes Klebsiella oxytoca KCTC 1686   8 8
No Yes Klebsiella pneumoniae JM45   3 3
No Yes Klebsiella pneumoniae CG43   2 2
No Yes Klebsiella pneumoniae KCTC 2242   2 2
No Yes Klebsiella pneumoniae 342   6 6
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   2 2
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   3 3
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   4 4
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   4 3
No Yes Enterobacter aerogenes EA1509E   13 12
No Yes Escherichia coli E24377A   13 11
No Yes Escherichia coli E. coli PMV-1   11 10
No Yes Escherichia coli JJ1886   14 12
No Yes Escherichia coli LY180   9 7
No Yes Escherichia coli APEC O78   9 8
No Yes Escherichia coli O7:K1 str. CE10   8 8
No Yes Escherichia coli O104:H4 str. 2009EL-2050   21 17
No Yes Escherichia coli O104:H4 str. 2009EL-2071   21 17
No Yes Escherichia coli O104:H4 str. 2011C-3493   21 17
No Yes Escherichia coli NA114   14 12
No Yes Escherichia coli P12b   10 9
No Yes Escherichia coli str. 'clone D i2'   16 14
No Yes Escherichia coli str. 'clone D i14'   16 14
No Yes Escherichia coli UM146   11 9
No Yes Escherichia coli 042   19 15
No Yes Escherichia coli Xuzhou21   17 15
No Yes Escherichia coli IHE3034   10 8
No Yes Escherichia coli UMNK88   12 11
No Yes Escherichia coli O83:H1 str. NRG 857C   10 8
No Yes Escherichia coli ABU 83972   18 14
No Yes Escherichia coli KO11FL   10 8
No Yes Escherichia coli KO11FL   10 8
No Yes Escherichia coli LF82   10 8
No Yes Escherichia coli ED1a   11 10
No Yes Escherichia coli IAI39   7 7
No Yes Escherichia coli UMN026   16 14
No Yes Escherichia coli 55989   17 13
No Yes Escherichia coli S88   10 8
No Yes Escherichia coli IAI1   10 8
No Yes Escherichia coli W   12 10
No Yes Escherichia coli W   12 10
No Yes Escherichia coli DH1   15 13
No Yes Escherichia coli DH1   15 13
No Yes Escherichia coli ATCC 8739   10 9
No Yes Escherichia coli BL21(DE3)   11 10
No Yes Escherichia coli BL21(DE3)   11 10
No Yes Escherichia coli SMS-3-5   12 11
No Yes Escherichia coli SE15   12 10
No Yes Escherichia coli SE11   11 10
No Yes Escherichia coli APEC O1   13 10
No Yes Escherichia coli O103:H2 str. 12009   13 11
No Yes Escherichia coli UTI89   9 8
No Yes Escherichia coli 536   11 10
No Yes Escherichia coli HS   15 13
No Yes Escherichia coli ETEC H10407   16 14
No Yes Escherichia coli O55:H7 str. RM12579   14 12
No Yes Escherichia coli O55:H7 str. CB9615   16 14
No Yes Escherichia coli O26:H11 str. 11368   18 14
No Yes Escherichia coli CFT073   17 14
No Yes Escherichia coli O111:H- str. 11128   10 7
No Yes Escherichia coli O127:H6 str. E2348/69   9 6
No Yes Escherichia coli O157:H7 str. TW14359   15 13
No Yes Escherichia coli O157:H7 str. EC4115   14 12
No Yes Escherichia coli O157:H7 str. Sakai   17 15
No Yes Escherichia coli O157:H7 str. EDL933   18 16
No Yes Escherichia coli str. K-12 substr. MDS42   6 5
No Yes Escherichia coli BW2952   10 9
No Yes Escherichia coli str. K-12 substr. MG1655   8 7
No Yes Escherichia coli str. K-12 substr. W3110   12 11
No Yes Escherichia coli str. K-12 substr. DH10B   10 9
No Yes Escherichia coli B str. REL606   10 9
No Yes Enterobacter cloacae SCF1   10 9
No Yes Enterobacter cloacae EcWSU1   4 4
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   6 6
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   5 5
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   9 9
No Yes Azotobacter vinelandii CA6   13 11
No Yes Azotobacter vinelandii CA   13 11
No Yes Pseudomonas denitrificans ATCC 13867   6 6
No Yes Pseudomonas syringae pv. phaseolicola 1448A   16 15
No Yes Pseudomonas syringae pv. syringae B728a   10 10
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas stutzeri DSM 4166   1 1
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   3 3
No Yes Pseudomonas monteilii SB3078   3 3
No Yes Pseudomonas putida H8234   7 7
No Yes Pseudomonas putida HB3267   4 4
No Yes Pseudomonas putida NBRC 14164   4 4
No Yes Pseudomonas putida DOT-T1E   4 4
No Yes Pseudomonas putida S16   4 4
No Yes Pseudomonas putida BIRD-1   3 3
No Yes Pseudomonas putida W619   5 5
No Yes Pseudomonas putida ND6   7 7
No Yes Pseudomonas putida KT2440   5 5
No Yes Pseudomonas putida GB-1   8 8
No Yes Pseudomonas protegens CHA0   14 14
No Yes Pseudomonas poae RE*1-1-14   8 8
No Yes Pseudomonas fluorescens F113   10 10
No Yes Pseudomonas fluorescens A506   14 7
No Yes Pseudomonas fluorescens R124   16 10
No Yes Pseudomonas fluorescens Pf0-1   10 6
No Yes Pseudomonas resinovorans NBRC 106553   7 6
No Yes Pseudomonas mendocina NK-01   8 5
No Yes Pseudomonas aeruginosa SCV20265   10 10
No Yes Pseudomonas aeruginosa MTB-1   9 9
No Yes Pseudomonas aeruginosa LES431   7 7
No Yes Pseudomonas aeruginosa RP73   7 7
No Yes Pseudomonas aeruginosa B136-33   9 8
No Yes Pseudomonas aeruginosa PA1R   7 7
No Yes Pseudomonas aeruginosa PA1   7 7
No Yes Pseudomonas aeruginosa DK2   7 7
No Yes Pseudomonas aeruginosa NCGM2.S1   9 8
No Yes Pseudomonas aeruginosa M18   8 8
No Yes Pseudomonas aeruginosa LESB58   9 9
No Yes Pseudomonas aeruginosa PA7   10 10
No Yes Pseudomonas aeruginosa PAO1   8 8
No Yes Acinetobacter genomosp. 13TU RUH2624   4 4
No Yes Acinetobacter sp. SH024   5 5
No Yes Acinetobacter calcoaceticus ruh2202   5 5
No Yes Acinetobacter baumannii ZW85-1   6 6
No Yes Acinetobacter baumannii TYTH-1   4 4
No Yes Acinetobacter baumannii BJAB0868   4 4
No Yes Acinetobacter baumannii BJAB0715   4 4
No Yes Acinetobacter baumannii BJAB07104   4 4
No Yes Acinetobacter baumannii TCDC-AB0715   3 3
No Yes Acinetobacter baumannii D1279779   3 3
No Yes Acinetobacter baumannii MDR-TJ   4 4
No Yes Acinetobacter baumannii 1656-2   4 4
No Yes Acinetobacter baumannii ATCC 19606   5 5
No Yes Acinetobacter baumannii AB307-0294   4 4
No Yes Acinetobacter baumannii AYE   4 4
No Yes Acinetobacter baumannii SDF   4 4
No Yes Acinetobacter baumannii MDR-ZJ06   4 4
No Yes Acinetobacter baumannii AB0057   4 4
No Yes Acinetobacter baumannii ACICU   4 4
No Yes Acinetobacter radioresistens SH164   2 2
No Yes Acinetobacter junii SH205   2 2
No Yes Acinetobacter johnsonii SH046   3 3
No Yes Acinetobacter lwoffii SH145   2 2
No Yes Methylophaga sp. JAM7   2 2
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Caldisphaera lagunensis DSM 15908   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Methanomethylovorans hollandica DSM 15978   12 10
No Yes Methanolobus psychrophilus R15   28 12
No Yes Methanosarcina mazei Tuc01   45 29
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Thermococcus sp. AM4   4 2
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   5 3
No Yes Ferroplasma acidarmanus fer1   1 1
No Yes Halovivax ruber XH-70   14 10
No Yes Natrinema pellirubrum DSM 15624   8 7
No Yes Natronococcus occultus SP4   8 7
No Yes Natronobacterium gregoryi SP2   5 5
No Yes Haloquadratum walsbyi C23   3 2
No Yes Halorhabdus tiamatea SARL4B   2 2
No Yes Natronomonas moolapensis 8.8.11   3 3
No Yes Haloarcula hispanica N601   8 8
No Yes Methanococcus maripaludis X1   14 7
No Yes Methanococcus maripaludis C6   5 4
No Yes Methanococcus maripaludis C7   10 7
No Yes Methanococcus maripaludis S2   7 5
No Yes Methanobacterium sp. SWAN-1   41 21
No Yes Homo sapiens 75_37 (old version GRC) Human 37 21
No Yes Homo sapiens (NCBI version) Human 20 11
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 15 8
No Yes Loa loa v3.3 (Request) Eye worm 9 5
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 5
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 4 2
No Yes Moniliophthora perniciosa FA553 (Genome survey)   37 36
No Yes Picea sitchensis (Incomplete) Sitka spruce 5 5
No Yes Lotus japonicus (Early assembly)   210 210
No Yes Malus x domestica (Duplicate) Apple 308 302
No Yes Ricinus communis (Early assembly) Castor bean 137 131
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   313 285
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 163 161
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 165 163
No Yes Phoenix dactylifera (Early draft) Date palm 79 76
No Yes Acholeplasma laidlawii PG-8A (duplicate)   3 2
No Yes Homo sapiens 69_37 Human 14 8
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 14 8
No Yes Gorilla gorilla 69_3.1 Western gorilla 13 8
No Yes Pongo abelii 69_2 Sumatran orangutan 14 7
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 14 8
No Yes Macaca mulatta 69_1 Rhesus monkey 15 8
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 13 8
No Yes Otolemur garnettii 69_3 Small-eared galago 14 8
No Yes Microcebus murinus 69_1 Gray mouse lemur 12 7
No Yes Rattus norvegicus 69_3.4 Norway rat 13 7
No Yes Mus musculus 69_38 House mouse 15 8
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 10 6
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 14 7
No Yes Cavia porcellus 69_3 Domestic guinea pig 14 8
No Yes Oryctolagus cuniculus 69_2 Rabbit 15 8
No Yes Ochotona princeps 69 American pika 13 8
No Yes Tupaia belangeri 69 Northern tree shrew 11 7
No Yes Sus scrofa 69_10.2 Pig 13 8
No Yes Bos taurus 69_3.1 Cattle 13 7
No Yes Vicugna pacos 69_1 Alpaca 9 7
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 12 7
No Yes Mustela putorius furo 69_1.0 Domestic ferret 14 7
No Yes Ailuropoda melanoleuca 69_1 Giant panda 14 8
No Yes Canis familiaris 69_3.1 Dog 16 8
No Yes Felis catus 69 Domestic cat 10 7
No Yes Equus caballus 69_2 Horse 16 8
No Yes Myotis lucifugus 69_2.0 Little brown bat 13 6
No Yes Pteropus vampyrus 69_1 Large flying fox 12 8
No Yes Sorex araneus 69_1 European shrew 8 6
No Yes Erinaceus europaeus 69 Western European hedgehog 11 6
No Yes Procavia capensis 69_1 Cape rock hyrax 12 7
No Yes Loxodonta africana 69_3 African savanna elephant 14 7
No Yes Echinops telfairi 69 Small Madagascar hedgehog 11 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 8 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 7 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 13 8
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 13 8
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 15 8
No Yes Ornithorhynchus anatinus 69_5 Platypus 11 9
No Yes Petromyzon marinus 69_7.0 Sea lamprey 9 4
No Yes Meleagris gallopavo 69_2 Turkey 8 5
No Yes Gallus gallus 69_2 Chicken 10 6
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 8 5
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 10 7
No Yes Anolis carolinensis 69_2.0 Green anole 11 6
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 14 7
No Yes Latimeria chalumnae 69_1 Coelacanth 17 10
No Yes Gadus morhua 69_1 Atlantic cod 13 7
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 12 6
No Yes Takifugu rubripes 69_4 Torafugu 12 5
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 14 7
No Yes Oryzias latipes 69_1 Japanese medaka 13 6
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 12 6
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 13 6
No Yes Danio rerio 69_9 Zebrafish 17 9
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 13 9
No Yes Ciona intestinalis 69 Vase tunicate 10 7
No Yes Drosophila melanogaster 69_5 Fruit fly 6 4
No Yes Caenorhabditis elegans 69_215 Roundworm 11 4
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 163 163
No Yes 1_050719N (meta-genome)   13 13
No Yes 1_Upper_euphotic (meta-genome)   7 7
No Yes 2_050719S (meta-genome)   50 48
No Yes 2_Base_of_chrolophyll_max (meta-genome)   4 4
No Yes 3_050719R (meta-genome)   37 35
No Yes 3_Below_base_of_euphotic (meta-genome)   13 13
No Yes 4_050719Q (meta-genome)   170 157
No Yes 4_Deep_abyss (meta-genome)   22 21
No Yes 5_050719P (meta-genome)   143 128
No Yes 5_Below_upper_mesopelagic (meta-genome)   16 16
No Yes 6_Upper_euphotic (meta-genome)   21 21
No Yes 7_Oxygen_minimum_layer (meta-genome)   26 25
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   7 7
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   12 12
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   49 46
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   52 47
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   24 16
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   98 96
No Yes Bath Hot Springs, planktonic community (meta-genome)   9 9
No Yes Combined (meta-genome)   355 319
No Yes Crater Hills (meta-genome)   3 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   275 264
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   74 74
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   67 67
No Yes Dump bottom (Dump bottom) (meta-genome)   592 581
No Yes Dump top (Dump top) (meta-genome)   423 417
No Yes Endophytic microbiome from Rice (meta-genome)   34 34
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   60 56
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   56 54
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   41 40
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   114 113
No Yes Fungus garden combined (combined) (meta-genome)   139 133
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   289 283
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   349 346
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   56 52
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   49 44
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   37 35
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   56 53
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   45 42
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   95 92
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   70 66
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   85 83
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   82 77
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   78 74
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   84 80
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome)   4 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   188 180
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   6 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   28 27
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   120 113
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   75 70
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   59 59
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   82 74
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   101 93
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   78 72
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   60 57
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   56 53
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   5 5
No Yes Human Gut Community Subject 7 (meta-genome)   80 61
No Yes Human Gut Community Subject 8 (meta-genome)   79 59
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   89 87
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   155 154
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   138 138
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   47 46
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   799 774
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   233 231
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   43 41
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   241 232
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   208 200
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   82 78
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   214 214
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   105 105
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   57 49
No Yes Mouse Gut Community lean1 (meta-genome)   6 6
No Yes Mouse Gut Community lean2 (meta-genome)   3 3
No Yes Mouse Gut Community lean3 (meta-genome)   3 3
No Yes Mouse Gut Community ob1 (meta-genome)   6 6
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   468594 388723
No Yes Nymph Lake Bulk Water (meta-genome)   1 1
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   276 270
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   24 15
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   9 4
No Yes Protozoadb 2010_08 (Protozoadb)   874 649
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   143 138
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   121 113
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   114 112
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   75 70
No Yes Sludge/US, Jazz Assembly (meta-genome)   25 23
No Yes Sludge/US, Phrap Assembly (meta-genome)   46 43
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   414 400
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   803 802
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   509 509
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   259 258
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   322 320
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   433 432
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   446 445
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   97 81
No Yes STRING v9.0.5 (STRING)   8504 6871
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   61 61
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   429 429
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   105 105
No Yes Termite Protist Endosymbiont Community (meta-genome)   87 85
No Yes Uniprot 2018_03 genome   189263 153801
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   11 10
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   202 185
No Yes Global Ocean Sampling Expedition (GOS)   4594 4270
No Yes NCBI plasmid sequences (Plasmids)   598 483
No Yes NCBI viral sequences (Viral)   331 298
No Yes PDB chains (SCOP 1.75) (PDB)   36 36
No Yes Protein Data Bank (all PDB sequenc)   401 384
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   750 737
No Yes TargetDB (Targets)   317 263
No Yes The Salmonella enterica Pan-genome (meta-genome)   172 139
No Yes UniProt viral sequences (Viral)   218 210

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