SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Hedgehog/intein (Hint) domain superfamily domain assignments
in
Vanderwaltozyma polyspora DSM 70294

Assignment details

(show help)


Vanderwaltozyma polyspora DSM 70294 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
tr|A7TIB9|A7TIB9_VANPO   5.89e-46   1-227   Intein (protein splicing domain)  
tr|A7TLB5|A7TLB5_VANPO   1.68e-72   282-456,672-715   Intein (protein splicing domain)  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Hedgehog/intein (Hint) domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   76260 76260
No Yes Homo sapiens 76_38 Human 3 3
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 6 6
No Yes Pongo abelii 76_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 3 3
No Yes Papio anubis 76 Olive baboon 3 3
No Yes Macaca mulatta 76_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 4 4
No Yes Otolemur garnettii 76_3 Small-eared galago 3 3
No Yes Microcebus murinus 76_1 Gray mouse lemur 3 3
No Yes Rattus norvegicus 76_5.0 Norway rat 3 3
No Yes Mus musculus 76_38 House mouse 3 3
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 3 3
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Ochotona princeps 76 American pika 2 2
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 3 3
No Yes Bos taurus 76_3.1 Cattle 3 3
No Yes Ovis aries 76_3.1 Sheep 4 4
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 3 3
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 3 3
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 2 2
No Yes Equus caballus 76_2 Horse 3 3
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 76_1 Large flying fox 3 3
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 2 2
No Yes Procavia capensis 76_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 76_3 African savanna elephant 7 7
No Yes Echinops telfairi 76 Small Madagascar hedgehog 3 3
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 3 3
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 3 3
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 4 4
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 76_2 Turkey 3 3
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 5 5
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 76_2.0 Green anole 3 3
No Yes Xenopus laevis African clawed frog 15 15
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 3 3
No Yes Lepisosteus oculatus 76 Spotted gar 3 3
No Yes Gadus morhua 76_1 Atlantic cod 4 4
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 5 5
No Yes Takifugu rubripes 76_4 Torafugu 7 7
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 5 5
No Yes Oryzias latipes 76_1 Japanese medaka 4 4
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 4
No Yes Poecilia formosa 76 Amazon molly 5 5
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 6 6
No Yes Astyanax mexicanus 76 Mexican tetra 5 5
No Yes Danio rerio 76_9 Zebrafish 7 7
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 3 3
No Yes Ciona intestinalis 76 Vase tunicate 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   37 37
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 10 9
No Yes Helobdella robusta   2 1
No Yes Capitella sp. I   2 2
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 6 6
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 1 1
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Strigamia maritima 22   3 3
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus   13 13
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   2 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   8 8
No Yes Caenorhabditis brenneri   7 7
No Yes Caenorhabditis remanei   7 7
No Yes Caenorhabditis elegans 76_235 Roundworm 14 14
No Yes Caenorhabditis briggsae 2   6 6
No Yes Trichinella spiralis 22   5 5
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 2 2
No Yes Acropora digitifera v1.0   9 9
No Yes Nematostella vectensis 1.0 Starlet sea anemone 7 7
No Yes Hydra vulgaris   4 4
No Yes Amphimedon queenslandica   5 5
No Yes Proterospongia sp. ATCC 50818   10 10
No Yes Monosiga brevicollis   6 6
No Yes Sphaeroforma arctica JP610   2 2
No Yes Capsaspora owczarzaki ATCC 30864   3 2
No Yes Mortierella verticillata NRRL 6337   3 3
No Yes Phycomyces blakesleeanus   2 2
No Yes Rhizomucor miehei CAU432   1 1
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Galerina marginata v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   2 2
No Yes Daldinia eschscholzii EC12 v1.0   2 2
No Yes Podospora anserina   3 3
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   2 2
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Botrytis cinerea B05.10   2 1
No Yes Blumeria graminis 22   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Alternaria brassicicola   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   2 2
No Yes Septoria musiva v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   2 2
No Yes Ajellomyces dermatitidis SLH14081   2 2
No Yes Histoplasma capsulatum class NAmI strain WU24   2 2
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus fumigatus Af293   2 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus tubingensis v1.0   2 1
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tropicalis MYA-3404   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Pichia stipitis CBS 6054   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   2 2
No Yes Candida glabrata CBS138   2 2
No Yes Zygosaccharomyces rouxii   2 2
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   6 6
No Yes Spizellomyces punctatus DAOM BR117   3 3
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Selaginella moellendorffii   34 34
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Physcomitrella patens   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   15 15
No Yes Cyanidioschyzon merolae   16 16
No Yes Porphyridium purpureum 02_2012   30 30
No Yes Thecamonas trahens ATCC 50062   3 3
No Yes Bigelowiella natans CCMP2755 22   5 5
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   2 2
No Yes Aureococcus anophagefferens   2 2
No Yes Albugo laibachii 22   2 2
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Fragilariopsis cylindrus   1 1
No Yes Perkinsus marinus ATCC 50983   1 1
No Yes Paramecium tetraurelia   1 1
No Yes Tetrahymena thermophila SB210 1   9 7
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Symbiodinium minutum clade B1 v1.2   20 20
No Yes Naegleria gruberi   1 1
No Yes Guillardia theta CCMP2712 v1.0   6 6
No Yes Emiliania huxleyi CCMP1516   20 20
No Yes Leptolyngbya sp. PCC 7376   2 2
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   4 4
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   2 2
No Yes Synechococcus sp. PCC 6312   4 3
No Yes Synechococcus elongatus PCC 7942   2 2
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   14 7
No Yes Geitlerinema sp. PCC 7407   3 2
No Yes Cyanothece sp. PCC 8802   2 2
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes cyanobacterium UCYN-A   1 1
No Yes Halothece sp. PCC 7418   7 7
No Yes Microcystis aeruginosa NIES-843   2 2
No Yes Gloeobacter violaceus PCC 7421   9 8
No Yes Rivularia sp. PCC 7116   6 6
No Yes Calothrix sp. PCC 7507   5 5
No Yes Anabaena variabilis ATCC 29413   2 2
No Yes 'Nostoc azollae' 0708   4 3
No Yes Nostoc sp. PCC 7107   7 6
No Yes Nostoc punctiforme PCC 73102   3 3
No Yes Nostoc sp. PCC 7120   3 3
No Yes Nostoc sp. PCC 7524   4 4
No Yes Anabaena sp. 90   5 4
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Acidimicrobium ferrooxidans DSM 10331   2 2
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Acidothermus cellulolyticus 11B   1 1
No Yes Modestobacter marinus   4 4
No Yes Blastococcus saxobsidens DD2   1 1
No Yes Geodermatophilus obscurus DSM 43160   2 2
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   4 4
No Yes Frankia sp. EAN1pec   1 1
No Yes Thermobifida fusca YX   4 3
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   3 2
No Yes Thermomonospora curvata DSM 43183   4 4
No Yes Kitasatospora setae KM-6054   7 7
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. SirexAA-E   2 2
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   4 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces scabiei 87.22   2 2
No Yes Actinosynnema mirum DSM 43827   6 6
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Amycolatopsis mediterranei U32   3 3
No Yes Kribbella flavida DSM 17836   3 2
No Yes Nocardioides sp. JS614   2 2
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Salinispora arenicola CNS-205   2 2
No Yes Salinispora tropica CNB-440   2 2
No Yes Verrucosispora maris AB-18-032   5 5
No Yes Micromonospora sp. L5   3 3
No Yes Micromonospora aurantiaca ATCC 27029   5 5
No Yes Actinoplanes sp. N902-109   3 3
No Yes Actinoplanes sp. SE50/110   12 12
No Yes Actinoplanes missouriensis 431   8 8
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   3 2
No Yes Rhodococcus opacus B4   2 2
No Yes Nocardia farcinica IFM 10152   3 3
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium vanbaalenii PYR-1   2 2
No Yes Mycobacterium canettii CIPT 140010059   3 3
No Yes Mycobacterium africanum GM041182   3 3
No Yes Mycobacterium tuberculosis KZN 1435   3 3
No Yes Mycobacterium tuberculosis   3 3
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   3 3
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium gilvum PYR-GCK   2 2
No Yes Mycobacterium chubuense NBB4   3 2
No Yes Mycobacterium smegmatis str. MC2 155   2 1
No Yes Mycobacterium leprae Br4923   4 4
No Yes Corynebacterium aurimucosum ATCC 700975   2 2
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   2 2
No Yes Isoptericola variabilis 225   2 2
No Yes Cellulomonas flavigena DSM 20109   5 4
No Yes [Cellvibrio] gilvus ATCC 13127   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Herpetosiphon aurantiacus DSM 785   4 4
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Truepera radiovictrix DSM 17093   3 3
No Yes Deinococcus gobiensis I-0   2 2
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   2 2
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Meiothermus ruber DSM 1279   2 2
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus scotoductus SA-01   4 4
No Yes Thermus thermophilus HB27   4 2
No Yes Megasphaera elsdenii DSM 20460   1 1
No Yes Acidaminococcus intestini RyC-MR95   1 1
No Yes Acidaminococcus fermentans DSM 20731   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   1 1
No Yes Clostridium clariflavum DSM 19732   14 14
No Yes Clostridium thermocellum ATCC 27405   11 11
No Yes Ruminococcus albus 7   4 4
No Yes Sulfobacillus acidophilus DSM 10332   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   2 2
No Yes Desulfitobacterium hafniense Y51   2 2
No Yes Desulfotomaculum reducens MI-1   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   2 2
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Mahella australiensis 50-1 BON   2 2
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 2
No Yes Caldicellulosiruptor bescii DSM 6725   2 2
No Yes Thermoanaerobacterium xylanolyticum LX-11   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Ammonifex degensii KC4   1 1
No Yes Halanaerobium hydrogeniformans   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Bacillus selenitireducens MLS10   2 2
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Ignavibacterium album JCM 16511   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chloroherpeton thalassium ATCC 35110   2 1
No Yes Haliscomenobacter hydrossis DSM 1100   2 2
No Yes Chitinophaga pinensis DSM 2588   2 2
No Yes Salinibacter ruber M8   3 3
No Yes Rhodothermus marinus DSM 4252   4 4
No Yes Flexibacter litoralis DSM 6794   3 2
No Yes Fibrella aestuarina   3 3
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Sphingobacterium sp. 21   3 2
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Thermovirga lienii DSM 17291   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   5 3
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Treponema azotonutricium ZAS-9   1 1
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Thermodesulfobacterium sp. OPB45   2 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   2 2
No Yes Sulfurihydrogenibium azorense Az-Fu1   1 1
No Yes Persephonella marina EX-H1   2 2
No Yes Aquifex aeolicus VF5   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Caldisericum exile AZM16c01   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   3 2
No Yes Thermodesulfovibrio yellowstonii DSM 11347   2 1
No Yes Sebaldella termitidis ATCC 33386   3 3
No Yes Leptotrichia buccalis C-1013-b   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes candidate division SR1 bacterium RAAC1_SR1_1   4 3
No Yes Acidithiobacillus caldus SM-1   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Desulfatibacillum alkenivorans AK-01   2 2
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   1 1
No Yes Hippea maritima DSM 10411   2 2
No Yes Haliangium ochraceum DSM 14365   6 6
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   8 8
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   6 6
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Neisseria meningitidis alpha14   4 4
No Yes Neisseria meningitidis FAM18   5 5
No Yes Neisseria lactamica 020-06   3 3
No Yes Neisseria gonorrhoeae NCCP11945   9 9
No Yes beta proteobacterium CB   1 1
No Yes Thiomonas arsenitoxydans   1 1
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Verminephrobacter eiseniae EF01-2   3 3
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Polaromonas sp. JS666   2 2
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Acidovorax sp. KKS102   1 1
No Yes Acidovorax citrulli AAC00-1   2 2
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Advenella kashmirensis WT001   6 6
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Dinoroseobacter shibae DFL 12   9 9
No Yes Phaeobacter gallaeciensis 2.10   9 9
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Jannaschia sp. CCS1   11 11
No Yes Ruegeria sp. TM1040   14 14
No Yes Ruegeria pomeroyi DSS-3   16 16
No Yes Ketogulonicigenium vulgare Y25   8 8
No Yes Ketogulonigenium vulgarum WSH-001   8 8
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   2 2
No Yes Rhodobacter capsulatus SB 1003   12 12
No Yes Paracoccus denitrificans PD1222   2 2
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Rhodospirillum centenum SW   2 2
No Yes Azospirillum sp. B510   1 1
No Yes Gluconacetobacter xylinus NBRC 3288   1 1
No Yes Granulibacter bethesdensis CGDNIH1   7 7
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   7 7
No Yes Acidiphilium cryptum JF-5   7 7
No Yes Gluconobacter oxydans 621H   8 8
No Yes Acetobacter pasteurianus IFO 3283-01   23 23
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   3 3
No Yes Methylobacterium sp. 4-46   5 5
No Yes Methylobacterium populi BJ001   3 3
No Yes Methylobacterium nodulans ORS 2060   3 3
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   2 2
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium radiobacter K84   2 2
No Yes Bradyrhizobium sp. ORS 278   2 2
No Yes Pasteurella multocida subsp. multocida str. 3480   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Halomonas elongata DSM 2581   4 4
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Methylococcus capsulatus str. Bath   2 2
No Yes Rhodanobacter denitrificans   1 1
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   3 2
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Thioalkalivibrio sp. K90mix   1 1
No Yes Halorhodospira halophila SL1   2 1
No Yes Allochromatium vinosum DSM 180   6 4
No Yes Thiocystis violascens DSM 198   3 3
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus halophilus Nc4   3 2
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Photorhabdus asymbiotica   2 2
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Candidatus Caldiarchaeum subterraneum   2 2
No Yes Fervidicoccus fontis Kam940   3 3
No Yes Aeropyrum pernix K1   1 1
No Yes Thermosphaera aggregans DSM 11486   1 1
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Staphylothermus marinus F1   2 2
No Yes Desulfurococcus fermentans DSM 16532   1 1
No Yes Desulfurococcus kamchatkensis 1221n   1 1
No Yes Vulcanisaeta moutnovskia 768-28   2 2
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Caldivirga maquilingensis IC-167   2 2
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes halophilic archaeon DL31   7 6
No Yes Methanocella arvoryzae MRE50   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta concilii GP6   1 1
No Yes Methanosalsum zhilinae DSM 4017   2 2
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosphaerula palustris E1-9c   2 2
No Yes Methanoregula boonei 6A8   1 1
No Yes Methanospirillum hungatei JF-1   1 1
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   4 3
No Yes Methanoculleus marisnigri JR1   2 2
No Yes Methanopyrus kandleri AV19   5 5
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Archaeoglobus profundus DSM 5631   14 13
No Yes Archaeoglobus veneficus SNP6   3 2
No Yes Thermococcus sp. 4557   6 5
No Yes Thermococcus onnurineus NA1   4 4
No Yes Thermococcus kodakarensis KOD1   15 12
No Yes Thermococcus gammatolerans EJ3   5 4
No Yes Thermococcus sibiricus MM 739   11 9
No Yes Thermococcus barophilus MP   7 6
No Yes Pyrococcus sp. ST04   11 10
No Yes Pyrococcus yayanosii CH1   9 8
No Yes Pyrococcus horikoshii OT3   14 13
No Yes Pyrococcus abyssi GE5   14 10
No Yes Pyrococcus furiosus COM1   10 9
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Picrophilus torridus DSM 9790   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Natrinema sp. J7-2   2 1
No Yes Natrialba magadii ATCC 43099   6 5
No Yes Halorubrum lacusprofundi ATCC 49239   1 1
No Yes Haloquadratum walsbyi DSM 16790   15 8
No Yes Halogeometricum borinquense DSM 11551   2 1
No Yes Haloferax mediterranei ATCC 33500   4 3
No Yes Haloferax volcanii DS2   1 1
No Yes Halomicrobium mukohataei DSM 12286   3 3
No Yes Halorhabdus utahensis DSM 12940   4 3
No Yes Natronomonas pharaonis DSM 2160   4 3
No Yes Haloarcula hispanica ATCC 33960   3 3
No Yes Haloarcula marismortui ATCC 43049   4 4
No Yes Halobacterium salinarum R1   2 2
No Yes Halobacterium sp. NRC-1   2 2
No Yes Methanotorris igneus Kol 5   9 9
No Yes Methanocaldococcus sp. FS406-22   11 9
No Yes Methanocaldococcus fervens AG86   3 2
No Yes Methanocaldococcus vulcanius M7   18 16
No Yes methanocaldococcus infernus ME   8 8
No Yes Methanocaldococcus jannaschii DSM 2661   20 15
No Yes Methanothermococcus okinawensis IH1   6 6
No Yes Methanococcus aeolicus Nankai-3   6 6
No Yes Methanothermus fervidus DSM 2088   6 6
No Yes Methanothermobacter marburgensis str. Marburg   1 1
No Yes Methanothermobacter thermautotrophicus str. Delta H   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 4 4
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 2 2
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 5 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 11 11
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Ajellomyces dermatitidis ER-3   2 2
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   2 2
No Yes Histoplasma capsulatum G186AR   2 2
No Yes Aspergillus fumigatus A1163   2 1
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   2 2
No Yes Saccharomyces cerevisiae FostersO   2 2
No Yes Saccharomyces cerevisiae VL3   2 2
No Yes Saccharomyces cerevisiae Vin13   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   2 2
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae CLIB215   2 2
No Yes Saccharomyces cerevisiae YJM789   3 3
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Batrachochytrium dendrobatidis JEL423   5 4
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   3 3
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   4 4
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   4 4
No Yes Synechocystis sp. PCC 6803 substr. GT-I   4 4
No Yes Synechocystis sp. PCC 6803   4 4
No Yes Dactylococcopsis salina PCC 8305   15 10
No Yes Synechococcus sp. JA-2-3B'a(2-13)   2 2
No Yes Synechococcus sp. JA-3-3Ab   2 2
No Yes Synechococcus sp. PCC 7002   3 3
No Yes Synechococcus elongatus PCC 6301   2 2
No Yes Crinalium epipsammum PCC 9333   3 3
No Yes Oscillatoria nigro-viridis PCC 7112   9 8
No Yes Oscillatoria acuminata PCC 6304   8 7
No Yes Arthrospira platensis NIES-39   3 3
No Yes Cyanothece sp. PCC 7822   6 5
No Yes Cyanothece sp. PCC 7425   3 2
No Yes Cyanothece sp. PCC 7424   4 4
No Yes Cyanothece sp. ATCC 51142   2 2
No Yes Cyanothece sp. PCC 8801   2 2
No Yes Cyanobacterium aponinum PCC 10605   4 4
No Yes Cyanobacterium stanieri PCC 7202   6 5
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   4 4
No Yes Calothrix parietina Calothrix sp. PCC 6303   5 5
No Yes Cylindrospermum stagnale PCC 7417   4 4
No Yes Anabaena cylindrica PCC 7122   5 5
No Yes Frankia sp. EuI1c   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   5 4
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces davawensis JCM 4913   2 2
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces venezuelae ATCC 10712   3 3
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   3 3
No Yes Saccharothrix espanaensis DSM 44229   11 10
No Yes Amycolatopsis mediterranei RB   3 3
No Yes Amycolatopsis mediterranei S699   3 3
No Yes Amycolatopsis mediterranei S699   3 3
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   6 6
No Yes Rhodococcus pyridinivorans SB3094   1 1
No Yes Nocardia brasiliensis ATCC 700358   2 1
No Yes Mycobacterium sp. MOTT36Y   2 1
No Yes Mycobacterium sp. JDM601   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium yongonense 05-1390   2 1
No Yes Mycobacterium intracellulare MOTT-64   2 2
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Mycobacterium intracellulare MOTT-02   2 2
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium canettii CIPT 140070017   3 3
No Yes Mycobacterium canettii CIPT 140060008   3 3
No Yes Mycobacterium canettii CIPT 140070008   3 3
No Yes Mycobacterium canettii CIPT 140070010   4 3
No Yes Mycobacterium tuberculosis EAI5/NITR206   3 3
No Yes Mycobacterium tuberculosis EAI5   3 3
No Yes Mycobacterium tuberculosis CAS/NITR204   3 3
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   3 3
No Yes Mycobacterium tuberculosis UT205   3 3
No Yes Mycobacterium tuberculosis RGTB423   2 2
No Yes Mycobacterium tuberculosis RGTB327   3 3
No Yes Mycobacterium tuberculosis CTRI-2   3 3
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   3 3
No Yes Mycobacterium tuberculosis KZN 605   2 2
No Yes Mycobacterium tuberculosis KZN 4207   3 3
No Yes Mycobacterium tuberculosis CCDC5180   3 3
No Yes Mycobacterium tuberculosis CCDC5079   3 3
No Yes Mycobacterium tuberculosis CCDC5079   3 3
No Yes Mycobacterium tuberculosis H37Ra   3 3
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   4 4
No Yes Mycobacterium tuberculosis str. Haarlem   3 3
No Yes Mycobacterium tuberculosis F11   3 3
No Yes Mycobacterium tuberculosis H37Rv   3 3
No Yes Mycobacterium tuberculosis CDC1551   3 3
No Yes Mycobacterium bovis AF2122/97   3 3
No Yes Mycobacterium bovis BCG str. Korea 1168P   3 3
No Yes Mycobacterium bovis BCG str. Mexico   3 3
No Yes Mycobacterium bovis BCG str. Tokyo 172   3 3
No Yes Mycobacterium gilvum Spyr1   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 1
No Yes Mycobacterium leprae TN   4 4
No Yes Mycobacterium kansasii ATCC 12478   3 3
No Yes Corynebacterium maris DSM 45190   1 1
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   2 2
No Yes Chthonomonas calidirosea T49   1 1
No Yes Deinococcus peraridilitoris DSM 19664   2 2
No Yes Thermus oshimai JL-2   2 2
No Yes Thermus thermophilus JL-18   3 2
No Yes Thermus thermophilus SG0.5JP17-16   7 4
No Yes Thermus thermophilus HB8   5 2
No Yes Clostridium thermocellum DSM 1313   9 9
No Yes Sulfobacillus acidophilus TPY   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfitobacterium hafniense DCB-2   2 2
No Yes Desulfotomaculum gibsoniae DSM 7213   3 3
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   2 2
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Halobacteroides halobius DSM 5150   2 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   1 1
No Yes Streptococcus constellatus subsp. pharyngis C818   1 1
No Yes Streptococcus constellatus subsp. pharyngis C232   1 1
No Yes Streptococcus suis D12   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Salinibacter ruber DSM 13855   3 3
No Yes Rhodothermus marinus SG0.5JP17-172   5 4
No Yes Singulisphaera acidiphila DSM 18658   6 6
No Yes Leptospira interrogans serovar Lai str. 56601   5 3
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   6 4
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   7 7
No Yes Neisseria meningitidis WUE 2594   3 3
No Yes Neisseria meningitidis G2136   4 4
No Yes Neisseria meningitidis M04-240196   3 3
No Yes Neisseria meningitidis M01-240149   2 2
No Yes Neisseria meningitidis NZ-05/33   2 2
No Yes Neisseria meningitidis M01-240355   3 3
No Yes Neisseria meningitidis 8013   4 4
No Yes Neisseria meningitidis 053442   5 5
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   4 4
No Yes Neisseria meningitidis alpha710   4 4
No Yes Neisseria meningitidis MC58   3 3
No Yes Neisseria gonorrhoeae TCDC-NG08107   10 10
No Yes Neisseria gonorrhoeae FA 1090   6 6
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   9 9
No Yes Phaeobacter gallaeciensis DSM 26640   10 10
No Yes Leisingera methylohalidivorans DSM 14336   12 12
No Yes Octadecabacter antarcticus 307   6 6
No Yes Octadecabacter arcticus 238   9 9
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Rhodobacter sphaeroides 2.4.1   2 2
No Yes Paracoccus aminophilus JCM 7686   19 19
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Gluconobacter oxydans H24   16 16
No Yes Acetobacter pasteurianus 386B   29 29
No Yes Acetobacter pasteurianus IFO 3283-12   23 23
No Yes Acetobacter pasteurianus IFO 3283-01-42C   23 23
No Yes Acetobacter pasteurianus IFO 3283-32   23 23
No Yes Acetobacter pasteurianus IFO 3283-26   23 23
No Yes Acetobacter pasteurianus IFO 3283-22   23 23
No Yes Acetobacter pasteurianus IFO 3283-07   23 23
No Yes Acetobacter pasteurianus IFO 3283-03   23 23
No Yes Methylobacterium extorquens DM4   3 3
No Yes Methylobacterium extorquens PA1   4 4
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti Rm41   2 2
No Yes Sinorhizobium meliloti SM11   2 2
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Hyphomicrobium denitrificans 1NES1   1 1
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Mannheimia haemolytica USMARC_2286   1 1
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   1 1
No Yes Mannheimia haemolytica D171   1 1
No Yes Mannheimia haemolytica D153   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   1 1
No Yes Coxiella burnetii CbuK_Q154   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter baumannii ZW85-1   4 4
No Yes Acinetobacter baumannii TYTH-1   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii BJAB07104   1 1
No Yes Acinetobacter baumannii TCDC-AB0715   2 2
No Yes Acinetobacter baumannii MDR-TJ   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   1 1
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Acinetobacter baumannii ACICU   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   3 2
No Yes Caldisphaera lagunensis DSM 15908   1 1
No Yes Methanomethylovorans hollandica DSM 15978   2 2
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Thermococcus sp. AM4   13 10
No Yes Thermococcus sp. CL1   8 4
No Yes Thermococcus litoralis DSM 5473   16 12
No Yes Pyrococcus sp. NA2   14 11
No Yes Pyrococcus furiosus DSM 3638   10 9
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   3 2
No Yes Ferroplasma acidarmanus fer1   2 2
No Yes Natrinema pellirubrum DSM 15624   5 5
No Yes Natronococcus occultus SP4   6 4
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Haloquadratum walsbyi C23   15 8
No Yes Halorhabdus tiamatea SARL4B   11 6
No Yes Natronomonas moolapensis 8.8.11   7 5
No Yes Haloarcula hispanica N601   3 3
No Yes Homo sapiens 75_37 (old version GRC) Human 3 3
No Yes Homo sapiens (NCBI version) Human 3 3
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 3 3
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Guillardia theta (nucleomorph)   1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   3 3
No Yes Homo sapiens 69_37 Human 3 3
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 3 3
No Yes Pongo abelii 69_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 69_3 Small-eared galago 3 3
No Yes Microcebus murinus 69_1 Gray mouse lemur 3 3
No Yes Rattus norvegicus 69_3.4 Norway rat 3 3
No Yes Mus musculus 69_38 House mouse 3 3
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 3 3
No Yes Cavia porcellus 69_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Ochotona princeps 69 American pika 2 2
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 3 3
No Yes Bos taurus 69_3.1 Cattle 3 3
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 3 3
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 3 3
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 3 3
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 69_1 Large flying fox 3 3
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 2 2
No Yes Procavia capensis 69_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 69_3 African savanna elephant 3 3
No Yes Echinops telfairi 69 Small Madagascar hedgehog 3 3
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 3 3
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 3 3
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 69_2 Turkey 2 2
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 3 3
No Yes Gadus morhua 69_1 Atlantic cod 4 4
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 4 4
No Yes Takifugu rubripes 69_4 Torafugu 4 4
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 4 4
No Yes Oryzias latipes 69_1 Japanese medaka 4 4
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 4 4
No Yes Danio rerio 69_9 Zebrafish 5 5
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 69 Vase tunicate 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 10 10
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes 1_050719N (meta-genome)   15 15
No Yes 2_050719S (meta-genome)   52 50
No Yes 3_050719R (meta-genome)   78 72
No Yes 4_050719Q (meta-genome)   49 48
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   59 56
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   5 5
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   4 4
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   3 3
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Bath Hot Springs, filamentous community (meta-genome)   7 7
No Yes Bath Hot Springs, planktonic community (meta-genome)   19 19
No Yes Combined (meta-genome)   2 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   78 78
No Yes Dump top (Dump top) (meta-genome)   31 31
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   14 14
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   11 11
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   25 25
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   5 5
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   5 5
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   8 7
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   4 4
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   2 2
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   40 40
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   12 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   52 52
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   21 21
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   72 71
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   36 35
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   22 21
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   2 2
No Yes Human Gut Community Subject 7 (meta-genome)   2 2
No Yes Human Gut Community Subject 8 (meta-genome)   3 3
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   15 15
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   9 9
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   4 4
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   4 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   57 56
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   16 16
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   14 14
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   22 21
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   23 23
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   6 6
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   4 4
No Yes NCBI 2017_08 genome   46464 45427
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   49 47
No Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome)   3 3
No Yes Protozoadb 2010_08 (Protozoadb)   7 7
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   27 26
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   10 10
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   11 11
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   2 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   43 43
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   83 83
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   35 35
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   45 45
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   28 28
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   5 5
No Yes STRING v9.0.5 (STRING)   869 812
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   11 11
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   8 8
No Yes Termite Protist Endosymbiont Community (meta-genome)   7 7
No Yes Uniprot 2018_03 genome   20894 19917
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   24 24
No Yes Global Ocean Sampling Expedition (GOS)   933 893
No Yes NCBI plasmid sequences (Plasmids)   92 92
No Yes NCBI viral sequences (Viral)   211 210
No Yes PDB chains (SCOP 1.75) (PDB)   9 9
No Yes Protein Data Bank (all PDB sequenc)   79 76
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   135 135
No Yes TargetDB (Targets)   69 64
No Yes UniProt viral sequences (Viral)   79 79

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]