SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


L domain-like superfamily domain assignments
in
Vanderwaltozyma polyspora DSM 70294

Assignment details

(show help)


Vanderwaltozyma polyspora DSM 70294 has 11 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
tr|A7TE75|A7TE75_VANPO   2.89e-22   18-162   U2A'-like  
tr|A7TFE1|A7TFE1_VANPO   0.00000000000164   306-422   L domain  
  0.00000000526   102-199   L domain  
  0.000544   173-249   Ngr ectodomain-like  
tr|A7TH66|A7TH66_VANPO   1.02e-23   101-251   mRNA export factor tap  
tr|A7TJM7|A7TJM7_VANPO   3.85e-43   950-1274   Internalin LRR domain  
  1.12e-39   728-972   Internalin LRR domain  
tr|A7TKG0|A7TKG0_VANPO   9.86e-29   582-928   Internalin LRR domain  
tr|A7TM18|A7TM18_VANPO   0.0000000000907   32-122,250-287   L domain  
  0.00000000808   204-333   Internalin LRR domain  
  0.068   129-181   Rab geranylgeranyltransferase alpha-subunit, C-terminal domain  
tr|A7TNR3|A7TNR3_VANPO   2.15e-48   51-321   Internalin LRR domain  
tr|A7TPK9|A7TPK9_VANPO   1.19e-21   278-399   Ngr ectodomain-like  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a L domain-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   954805 954805
No Yes Homo sapiens 76_38 Human 770 659
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 257 212
No Yes Gorilla gorilla 76_3.1 Western gorilla 345 281
No Yes Pongo abelii 76_2 Sumatran orangutan 251 210
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 249 202
No Yes Papio anubis 76 Olive baboon 273 231
No Yes Macaca mulatta 76_1 Rhesus monkey 390 314
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 502 417
No Yes Otolemur garnettii 76_3 Small-eared galago 274 222
No Yes Microcebus murinus 76_1 Gray mouse lemur 211 169
No Yes Rattus norvegicus 76_5.0 Norway rat 312 259
No Yes Mus musculus 76_38 House mouse 534 445
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 197 163
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 263 218
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 264 213
No Yes Cavia porcellus 76_3 Domestic guinea pig 262 220
No Yes Oryctolagus cuniculus 76_2 Rabbit 265 217
No Yes Ochotona princeps 76 American pika 195 160
No Yes Tupaia belangeri 76 Northern tree shrew 177 149
No Yes Sus scrofa 76_10.2 Pig 314 255
No Yes Bos taurus 76_3.1 Cattle 273 227
No Yes Ovis aries 76_3.1 Sheep 272 223
No Yes Vicugna pacos 76_1 Alpaca 130 112
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 221 183
No Yes Mustela putorius furo 76_1.0 Domestic ferret 264 214
No Yes Ailuropoda melanoleuca 76_1 Giant panda 269 219
No Yes Canis familiaris 76_3.1 Dog 321 268
No Yes Felis catus 76_6.2 Domestic cat 247 206
No Yes Equus caballus 76_2 Horse 281 229
No Yes Myotis lucifugus 76_2.0 Little brown bat 243 203
No Yes Pteropus vampyrus 76_1 Large flying fox 222 178
No Yes Sorex araneus 76_1 European shrew 160 126
No Yes Erinaceus europaeus 76 Western European hedgehog 185 151
No Yes Procavia capensis 76_1 Cape rock hyrax 178 144
No Yes Loxodonta africana 76_3 African savanna elephant 315 259
No Yes Echinops telfairi 76 Small Madagascar hedgehog 184 152
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 282 231
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 138 111
No Yes Macropus eugenii 76_1.0 Tammar wallaby 204 159
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 272 219
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 253 201
No Yes Ornithorhynchus anatinus 76_5 Platypus 245 210
No Yes Saccoglossus kowalevskii v3.0   320 256
No Yes Petromyzon marinus 76_7.0 Sea lamprey 407 387
No Yes Meleagris gallopavo 76_2 Turkey 257 208
No Yes Gallus gallus 76_4 Chicken 240 191
No Yes Anas platyrhynchos 76_1.0 Mallard 231 187
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 219 178
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 226 183
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 271 226
No Yes Anolis carolinensis 76_2.0 Green anole 259 208
No Yes Xenopus laevis African clawed frog 268 218
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 308 242
No Yes Latimeria chalumnae 76_1 Coelacanth 312 261
No Yes Lepisosteus oculatus 76 Spotted gar 339 278
No Yes Gadus morhua 76_1 Atlantic cod 320 255
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 315 261
No Yes Takifugu rubripes 76_4 Torafugu 742 577
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 362 294
No Yes Oryzias latipes 76_1 Japanese medaka 339 267
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 331 270
No Yes Poecilia formosa 76 Amazon molly 341 271
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 386 307
No Yes Astyanax mexicanus 76 Mexican tetra 339 281
No Yes Danio rerio 76_9 Zebrafish 487 399
No Yes Oikopleura dioica   107 94
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 161 107
No Yes Ciona intestinalis 76 Vase tunicate 149 125
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 739 494
No Yes Adineta vaga   185 163
No Yes Octopus bimaculoides 280   204 166
No Yes Crassostrea gigas 22 Pacific oyster 201 164
No Yes Lottia gigantea Owl limpet 170 141
No Yes Helobdella robusta   144 120
No Yes Capitella sp. I   430 399
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 114
No Yes Heliconius melpomene Postman butterfly 156 109
No Yes Bombyx mori Domestic silkworm 124 107
No Yes Nasonia vitripennis Jewel wasp 114 70
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 357 242
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 137 99
No Yes Linepithema humile v1.1 Argentine ant 129 90
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 120
No Yes Solenopsis invicta v.2.2.3 Red fire ant 128 99
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 136 96
No Yes Atta cephalotes v1.1   136 100
No Yes Camponotus floridanus v3.3 Florida carpenter ant 137 93
No Yes Lucilia cuprina Australian sheep blowfly 135 87
No Yes Drosophila grimshawi 1.3   149 99
No Yes Drosophila willistoni 1.3   175 123
No Yes Drosophila pseudoobscura 2.13   163 118
No Yes Drosophila persimilis 1.3   161 119
No Yes Drosophila suzukii   174 122
No Yes Drosophila yakuba 1.3   148 106
No Yes Drosophila simulans 1.3   137 98
No Yes Drosophila sechellia 1.3   150 108
No Yes Drosophila melanogaster 76_5 Fruit fly 328 219
No Yes Drosophila erecta 1.3   151 107
No Yes Drosophila ananassae 1.3   153 109
No Yes Drosophila virilis 1.2   144 101
No Yes Drosophila mojavensis 1.3   152 104
No Yes Megaselia scalaris 22   88 76
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 230 174
No Yes Culex pipiens quinquefasciatus Southern house mosquito 218 173
No Yes Anopheles darlingi 22 American malaria mosquito 164 128
No Yes Anopheles gambiae 49_3j African malaria mosquito 231 167
No Yes Tribolium castaneum 3.0 Red flour beetle 225 168
No Yes Pediculus humanus corporis (Early assembly) Human body louse 120 81
No Yes Acyrthosiphon pisum Pea aphid 112 74
No Yes Rhodnius prolixus 22   111 84
No Yes Daphnia pulex Common water flea 140 116
No Yes Strigamia maritima 22   192 127
No Yes Sarcoptes scabiei   81 59
No Yes Tetranychus urticae Two-spotted spider mite 93 75
No Yes Ixodes scapularis (Preliminary) Black-legged tick 120 99
No Yes Pristionchus pacificus   52 50
No Yes Meloidogyne incognita Southern root-knot nematode 62 48
No Yes Meloidogyne hapla   32 31
No Yes Onchocerca volvulus 22   61 46
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 89 69
No Yes Caenorhabditis japonica   103 81
No Yes Caenorhabditis brenneri   307 158
No Yes Caenorhabditis remanei   236 130
No Yes Caenorhabditis elegans 76_235 Roundworm 290 172
No Yes Caenorhabditis briggsae 2   224 126
No Yes Trichinella spiralis 22   47 41
No Yes Hymenolepis microstoma   53 42
No Yes Echinococcus multilocularis   64 51
No Yes Echinococcus granulosus   61 49
No Yes Taenia solium Pork tapeworm 62 54
No Yes Schistosoma mansoni   71 60
No Yes Mnemiopsis leidyi Sea walnut 76 64
No Yes Thelohanellus kitauei   8 7
No Yes Acropora digitifera v1.0   117 109
No Yes Nematostella vectensis 1.0 Starlet sea anemone 117 105
No Yes Hydra vulgaris   60 56
No Yes Amphimedon queenslandica   136 125
No Yes Trichoplax adhaerens   134 117
No Yes Proterospongia sp. ATCC 50818   359 196
No Yes Monosiga brevicollis   197 116
No Yes Sphaeroforma arctica JP610   82 67
No Yes Capsaspora owczarzaki ATCC 30864   211 162
No Yes Conidiobolus coronatus NRRL28638 v1.0   69 68
No Yes Mortierella verticillata NRRL 6337   48 43
No Yes Phycomyces blakesleeanus   39 34
No Yes Rhizopus oryzae RA 99-880   38 28
No Yes Mucor circinelloides   34 25
No Yes Rhizomucor miehei CAU432   35 28
No Yes Malassezia globosa CBS 7966   22 18
No Yes Sporisorium reilianum 22   13 11
No Yes Ustilago maydis   13 11
No Yes Mixia osmundae IAM 14324 v1.0   10 9
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   12 12
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   12 10
No Yes Melampsora laricis-populina   20 18
No Yes Rhodotorula graminis WP1 v1.0   22 20
No Yes Sporobolomyces roseus IAM 13481   19 18
No Yes Microbotryum violaceum 22   14 14
No Yes Wallemia sebi v1.0   10 8
No Yes Sphaerobolus stellatus v1.0   33 31
No Yes Piloderma croceum F 1598 v1.0   21 20
No Yes Serpula lacrymans var. lacrymans S7.9   15 12
No Yes Coniophora puteana   28 27
No Yes Hydnomerulius pinastri v2.0   18 15
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   10 9
No Yes Pisolithus microcarpus 441 v1.0   18 16
No Yes Pisolithus tinctorius Marx 270 v1.0   22 21
No Yes Scleroderma citrinum Foug A v1.0   18 16
No Yes Coprinopsis cinerea okayama7 130 v3   15 14
No Yes Pleurotus ostreatus Oyster mushroom 29 28
No Yes Amanita thiersii Skay4041 v1.0   14 13
No Yes Amanita muscaria Koide v1.0 Fly agaric 32 30
No Yes Galerina marginata v1.0   41 38
No Yes Hebeloma cylindrosporum h7 v2.0   24 23
No Yes Laccaria bicolor S238N-H82   24 24
No Yes Agaricus bisporus var. bisporus   22 21
No Yes Schizophyllum commune   29 28
No Yes Stereum hirsutum FP-91666 SS1 v1.0   21 21
No Yes Heterobasidion annosum   16 15
No Yes Gloeophyllum trabeumv1.0   19 17
No Yes Punctularia strigosozonata v1.0   12 12
No Yes Sebacina vermifera MAFF 305830 v1.0   91 86
No Yes Fomitiporia mediterranea v1.0   19 17
No Yes Tulasnella calospora AL13/4D v1.0   33 31
No Yes Postia placenta   24 23
No Yes Wolfiporia cocos MD-104 SS10 v1.0   19 18
No Yes Fomitopsis pinicolav1.0   16 16
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   19 18
No Yes Phanerochaete chrysosporium RP-78 2.1   12 11
No Yes Dichomitus squalens   18 15
No Yes Trametes versicolor v1.0   26 26
No Yes Tremella mesenterica Witches' butter 13 12
No Yes Daldinia eschscholzii EC12 v1.0   14 12
No Yes Apiospora montagnei NRRL 25634 v1.0   17 14
No Yes Magnaporthe poae ATCC 64411 22   13 10
No Yes Magnaporthe grisea 70-15   11 8
No Yes Podospora anserina   12 8
No Yes Sporotrichum thermophile ATCC 42464   16 12
No Yes Thielavia terrestris NRRL 8126   14 11
No Yes Chaetomium globosum CBS 148.51   15 12
No Yes Neurospora tetrasperma   14 10
No Yes Neurospora discreta FGSC 8579   13 9
No Yes Neurospora crassa OR74A   16 11
No Yes Cryphonectria parasitica Chestnut blight fungus 13 11
No Yes Verticillium albo-atrum VaMs.102   11 10
No Yes Verticillium dahliae VdLs.17   11 10
No Yes Acremonium alcalophilumv 1.0   16 13
No Yes Glomerella graminicola 22   12 9
No Yes Fusarium graminearum   13 11
No Yes Nectria haematococca mpVI   14 12
No Yes Fusarium oxysporum f. sp. lycopersici 4286   10 9
No Yes Fusarium verticillioides 7600   15 11
No Yes Trichoderma asperellum CBS 433.97 v1.0   15 11
No Yes Trichoderma atroviride   14 11
No Yes Trichoderma citrinoviride v1.0   11 10
No Yes Trichoderma reesei 1.2   12 11
No Yes Trichoderma virens Gv29-8   15 12
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   13 10
No Yes Trichoderma harzianum CBS 226.95 v1.0   13 11
No Yes Amorphotheca resinae v1.0 Creosote fungus 13 10
No Yes Botrytis cinerea B05.10   13 9
No Yes Sclerotinia sclerotiorum   14 11
No Yes Blumeria graminis 22   13 10
No Yes Didymella exigua CBS 183.55 v1.0   15 11
No Yes Leptosphaeria maculans 22   10 8
No Yes Setosphaeria turcica v1.0   16 12
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   12 10
No Yes Cochliobolus victoriae FI3 v1.0   13 10
No Yes Cochliobolus carbonum 26-R-13 v1.0   12 10
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 14 12
No Yes Alternaria brassicicola   9 8
No Yes Cochliobolus lunatus m118 v2.0   13 10
No Yes Pyrenophora teres f. teres 22   13 10
No Yes Pyrenophora tritici-repentis   11 9
No Yes Stagonospora nodorum   14 10
No Yes Mycosphaerella graminicola IPO323   13 10
No Yes Zasmidium cellare ATCC 36951 v1.0   12 9
No Yes Dothistroma septosporum   13 10
No Yes Septoria musiva v1.0   13 10
No Yes Mycosphaerella fijiensis CIRAD86   13 10
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   13 11
No Yes Paracoccidioides brasiliensis Pb18   13 11
No Yes Coccidioides posadasii RMSCC 3488   15 11
No Yes Coccidioides immitis RS   16 12
No Yes Ajellomyces dermatitidis SLH14081   15 12
No Yes Histoplasma capsulatum class NAmI strain WU24   14 11
No Yes Microsporum canis CBS 113480   17 13
No Yes Trichophyton equinum CBS 127.97   14 11
No Yes Trichophyton verrucosum HKI 0517   13 10
No Yes Arthroderma benhamiae CBS 112371   14 11
No Yes Trichophyton tonsurans CBS 112818   15 12
No Yes Trichophyton rubrum CBS 118892   14 11
No Yes Uncinocarpus reesii 1704   13 10
No Yes Aspergillus zonatus v1.0   17 13
No Yes Penicillium chrysogenum Wisconsin 54-1255   16 13
No Yes Penicillium chrysogenum v1.0   17 14
No Yes Aspergillus acidus v1.0   15 12
No Yes Aspergillus fumigatus Af293   15 11
No Yes Aspergillus brasiliensis v1.0   15 12
No Yes Aspergillus nidulans FGSC A4   18 15
No Yes Aspergillus sydowii v1.0   18 15
No Yes Aspergillus versicolor v1.0   20 17
No Yes Aspergillus glaucus   14 11
No Yes Aspergillus carbonarius ITEM 5010   16 12
No Yes Neosartorya fischeri NRRL 181   15 11
No Yes Aspergillus terreus NIH2624   12 11
No Yes Aspergillus tubingensis v1.0   16 12
No Yes Aspergillus wentii v1.0   15 12
No Yes Aspergillus oryzae RIB40   14 11
No Yes Aspergillus niger 22   14 12
No Yes Aspergillus niger ATCC 1015   13 10
No Yes Aspergillus flavus NRRL3357   15 12
No Yes Aspergillus clavatus NRRL 1   16 13
No Yes Penicillium marneffei ATCC 18224   12 10
No Yes Tuber melanosporum Mel28 22   12 9
No Yes Tuber melanosporum Vittad Perigord truffle 12 9
No Yes Hansenula polymorpha v2.0   12 8
No Yes Dekkera bruxellensis CBS 2499 v2.0   13 12
No Yes Pichia membranifaciensv1.0   12 9
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   21 18
No Yes Candida dubliniensis CD36   30 22
No Yes Candida tropicalis MYA-3404   63 50
No Yes Candida parapsilosis   26 21
No Yes Candida albicans SC5314   54 48
No Yes Lodderomyces elongisporus NRRL YB-4239   15 11
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   56 41
No Yes Pichia stipitis CBS 6054   37 29
No Yes Candida guilliermondii ATCC 6260   34 31
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   29 22
No Yes Debaromyces hansenii   18 14
No Yes Wickerhamomyces anomalus   20 17
No Yes Pichia pastoris GS115   20 15
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   8 7
No Yes Yarrowia lipolytica CLIB122   13 10
No Yes Candida lusitaniae ATCC 42720   21 17
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   20 15
No Yes Vanderwaltozyma polyspora DSM 70294   11 8
No Yes Candida glabrata CBS138   18 12
No Yes Kluyveromyces thermotolerans CBS 6340   13 10
No Yes Lachancea kluyveri   14 11
No Yes Kluyveromyces waltii   10 7
No Yes Ashbya gossypii ATCC 10895   11 8
No Yes Zygosaccharomyces rouxii   10 8
No Yes Saccharomyces mikatae MIT   17 12
No Yes Saccharomyces paradoxus MIT   17 12
No Yes Saccharomyces cerevisiae 76 Baker's yeast 16 11
No Yes Saccharomyces bayanus MIT   17 13
No Yes Kluyveromyces lactis   13 10
No Yes Schizosaccharomyces cryophilus OY26 22   14 11
No Yes Schizosaccharomyces octosporus yFS286   13 10
No Yes Schizosaccharomyces japonicus yFS275   13 10
No Yes Schizosaccharomyces pombe Fission yeast 13 11
No Yes Catenaria anguillulae PL171 v1.0   64 61
No Yes Allomyces macrogynus ATCC 38327   104 94
No Yes Spizellomyces punctatus DAOM BR117   39 35
No Yes Dictyostelium discoideum   139 131
No Yes Dictyostelium purpureum   377 325
No Yes Entamoeba dispar 1.2   449 323
No Yes Entamoeba invadens 1.2   937 683
No Yes Entamoeba histolytica 1   212 155
No Yes Selaginella moellendorffii   490 382
No Yes Pinus taeda Loblolly pine 1961 1479
No Yes Picea abies Norway spruce 843 690
No Yes Eucalyptus grandis v201 Rose gum 2830 1992
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1222 881
No Yes Gossypium raimondii v221   1900 1430
No Yes Citrus clementina v165   1860 1367
No Yes Citrus sinensis v154 Sweet orange 1888 1492
No Yes Thellungiella halophila v173   647 539
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 957 742
No Yes Capsella rubella v183   745 607
No Yes Arabidopsis lyrata Lyrate rockcress 626 533
No Yes Arabidopsis thaliana 10 Thale cress 741 614
No Yes Carica papaya Papaya 371 292
No Yes Medicago truncatula Barrel medic 2491 1925
No Yes Phaseolus vulgaris v186 French bean 1153 879
No Yes Glycine max v109 Soybean 1619 1248
No Yes Cucumis sativus v122 Cucumber 490 397
No Yes Fragaria vesca Wild strawberry 921 699
No Yes Malus domestica v196 Apple 3040 2317
No Yes Prunus persica v139 Peach 1245 910
No Yes Linum usitatissimum v200 Flax 1052 805
No Yes Manihot esculenta v147 Cassava 984 755
No Yes Populus trichocarpa v156 Black cottonwood 1755 1357
No Yes Vitis vinifera Wine grape 1060 816
No Yes Mimulus guttatus v140 Spotted monkey flower 832 707
No Yes Solanum lycopersicum v.2.3 Tomato 814 638
No Yes Solanum tuberosum Potato 1469 1169
No Yes Actinidia chinensis Hongyang   684 553
No Yes Aquilegia coerulea v195   809 655
No Yes Triticum urartu 22   1203 909
No Yes Triticum aestivum 22 Bread wheat 2533 2114
No Yes Aegilops tauschii 22   1572 1209
No Yes Brachypodium distachyon Stiff brome 788 654
No Yes Oryza barthii 22 African wild rice 1621 1159
No Yes Oryza meridionalis 22   1455 1043
No Yes Oryza glumaepatula 22   1671 1203
No Yes Oryza glaberrima African rice 809 666
No Yes Oryza punctata 22   1300 924
No Yes Oryza nivara 22   1887 1314
No Yes Oryza brachyantha 22 Malo sina 786 625
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1491 1181
No Yes Oryza sativa v193 Rice 1476 1173
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 895 712
No Yes Panicum virgatum v202 Switchgrass 1984 1611
No Yes Setaria italica v164 Foxtail millet 1148 908
No Yes Zea mays subsp. mays Maize 634 533
No Yes Zea mays v181 Maize 702 590
No Yes Sorghum bicolor Sorghum 882 696
No Yes Musa balbisiana Balbis banana 698 556
No Yes Musa acuminata 22 Wild Malaysian banana 748 602
No Yes Amborella trichopoda 22   465 372
No Yes Physcomitrella patens   347 276
No Yes Coccomyxa subellipsoidea sp. C-169 v2   52 46
No Yes Asterochloris sp. Cgr/DA1pho v1.0   40 39
No Yes Chlorella variabilis sp. NC64A   88 85
No Yes Chlorella vulgaris   39 35
No Yes Volvox carteri f. nagariensis   67 59
No Yes Volvox carteri v199   63 57
No Yes Chlamydomonas reinhardtii 4.0   83 68
No Yes Ostreococcus sp. RCC809   19 15
No Yes Ostreococcus lucimarinus CCE9901   19 15
No Yes Ostreococcus tauri   22 18
No Yes Bathycoccus prasinos   21 19
No Yes Micromonas sp. RCC299   90 74
No Yes Micromonas pusilla CCMP1545 v3.0   46 41
No Yes Cyanidioschyzon merolae strain 10D 22   7 7
No Yes Cyanidioschyzon merolae   7 7
No Yes Porphyridium purpureum 02_2012   16 16
No Yes Thecamonas trahens ATCC 50062   126 113
No Yes Bigelowiella natans CCMP2755 22   95 82
No Yes Giardia lamblia 2.3   28 26
No Yes Cyanophora paradoxa   97 89
No Yes Leishmania mexicana 2.4   70 63
No Yes Leishmania major strain Friedlin   98 84
No Yes Leishmania infantum JPCM5 2.4   81 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   80 69
No Yes Trypanosoma vivax   118 81
No Yes Trypanosoma cruzi strain CL Brener   36 34
No Yes Trypanosoma congolense 2.4   50 45
No Yes Trypanosoma brucei gambiense v4.1   62 50
No Yes Trypanosoma brucei TREU927 v4.1   91 63
No Yes Ectocarpus siliculosus   208 197
No Yes Aureococcus anophagefferens   75 69
No Yes Albugo laibachii 22   32 28
No Yes Pythium iwayamai DAOM BR242034 22   164 153
No Yes Pythium arrhenomanes ATCC 12531 22   95 90
No Yes Pythium ultimum v1.7-2   123 114
No Yes Pythium aphanidermatum DAOM BR444 22   132 126
No Yes Pythium irregulare DAOM BR486 22   137 130
No Yes Pythium vexans DAOM BR484 22   121 106
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 80 73
No Yes Phytophthora sojae 1.1   94 84
No Yes Phytophthora infestans T30-4   104 96
No Yes Phytophthora capsici   86 81
No Yes Hyaloperonospora arabidopsidis 22   17 16
No Yes Phaeodactylum tricornutumCCAP 1055/1   41 39
No Yes Fragilariopsis cylindrus   147 137
No Yes Thalassiosira pseudonana CCMP1335   58 53
No Yes Perkinsus marinus ATCC 50983   41 39
No Yes Paramecium tetraurelia   129 123
No Yes Tetrahymena thermophila SB210 1   60 60
No Yes Ichthyophthirius multifiliis strain G5   21 21
No Yes Cryptosporidium hominis   4 4
No Yes Cryptosporidium muris   6 6
No Yes Cryptosporidium parvum Iowa II   5 5
No Yes Neospora caninum   16 15
No Yes Toxoplasma gondii VEG   14 12
No Yes Toxoplasma gondii ME49   14 12
No Yes Toxoplasma gondii GT1   13 11
No Yes Babesia bovis T2Bo   12 12
No Yes Theileria parva   5 5
No Yes Theileria annulata   4 4
No Yes Plasmodium falciparum 3D7   13 12
No Yes Plasmodium vivax SaI-1 7.0   13 12
No Yes Plasmodium knowlesi strain H   12 11
No Yes Plasmodium yoelii ssp. yoelii 1   16 16
No Yes Plasmodium chabaudi   13 11
No Yes Plasmodium berghei ANKA   13 12
No Yes Symbiodinium minutum clade B1 v1.2   568 413
No Yes Naegleria gruberi   109 105
No Yes Trichomonas vaginalis   1659 976
No Yes Guillardia theta CCMP2712 v1.0   191 150
No Yes Emiliania huxleyi CCMP1516   276 239
No Yes Acholeplasma laidlawii PG-8A   1 1
No Yes Leptolyngbya sp. PCC 7376   8 5
No Yes Pseudanabaena sp. PCC 7367   2 2
No Yes Acaryochloris marina MBIC11017   9 6
No Yes Microcoleus sp. PCC 7113   7 6
No Yes Trichodesmium erythraeum IMS101   3 3
No Yes Geitlerinema sp. PCC 7407   2 1
No Yes Cyanothece sp. PCC 8802   2 2
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   13 12
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   2 1
No Yes Nostoc sp. PCC 7107   2 2
No Yes Nostoc punctiforme PCC 73102   7 5
No Yes Nostoc sp. PCC 7120   2 1
No Yes Anabaena sp. 90   2 1
No Yes Mycoplasma conjunctivae HRC/581   1 1
No Yes Mycoplasma bovis HB0801   1 1
No Yes Mycoplasma fermentans M64   2 2
No Yes Mycoplasma agalactiae PG2   1 1
No Yes Mycoplasma hyorhinis GDL-1   1 1
No Yes Mycoplasma hyopneumoniae 168   1 1
No Yes Mycoplasma hominis ATCC 23114   6 2
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Eggerthella lenta DSM 2243   7 4
No Yes Slackia heliotrinireducens DSM 20476   4 3
No Yes Coriobacterium glomerans PW2   7 6
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   2 1
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   3 2
No Yes Kitasatospora setae KM-6054   2 2
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   4 4
No Yes Kribbella flavida DSM 17836   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Actinoplanes missouriensis 431   2 2
No Yes Sanguibacter keddieii DSM 10542   2 2
No Yes Intrasporangium calvum DSM 43043   2 2
No Yes Cellulomonas fimi ATCC 484   2 2
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl-04   1 1
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Arcanobacterium haemolyticum DSM 20595   1 1
No Yes Herpetosiphon aurantiacus DSM 785   9 6
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Marinithermus hydrothermalis DSM 14884   3 2
No Yes Finegoldia magna ATCC 29328   6 4
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   2 2
No Yes Natranaerobius thermophilus JW/NM-WN-LF   4 3
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   1 1
No Yes Clostridium clariflavum DSM 19732   11 7
No Yes Eubacterium siraeum   5 5
No Yes Clostridium cellulolyticum H10   1 1
No Yes Ethanoligenens harbinense YUAN-3   5 4
No Yes Faecalibacterium prausnitzii   2 2
No Yes Ruminococcus sp.   12 10
No Yes Ruminococcus bromii   7 7
No Yes Ruminococcus albus 7   41 35
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   5 3
No Yes Syntrophobotulus glycolicus DSM 8271   2 1
No Yes Desulfitobacterium hafniense Y51   4 2
No Yes Desulfitobacterium dehalogenans ATCC 51507   2 2
No Yes Desulfotomaculum acetoxidans DSM 771   7 3
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Acetobacterium woodii DSM 1030   9 7
No Yes Eubacterium eligens ATCC 27750   2 2
No Yes Eubacterium limosum KIST612   6 5
No Yes Filifactor alocis ATCC 35896   1 1
No Yes Clostridium phytofermentans ISDg   8 6
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   5 4
No Yes Eubacterium rectale M104/1   10 9
No Yes Eubacterium rectale ATCC 33656   2 2
No Yes Roseburia hominis A2-183   1 1
No Yes Roseburia intestinalis   4 4
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   3 2
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus metalliredigens QYMF   2 2
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium novyi NT   2 2
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium kluyveri DSM 555   3 3
No Yes Clostridium beijerinckii NCIMB 8052   5 5
No Yes Clostridium tetani E88   7 3
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   9 4
No Yes Clostridium botulinum A str. ATCC 3502   6 4
No Yes Clostridium acetobutylicum ATCC 824   8 6
No Yes Halothermothrix orenii H 168   3 2
No Yes Halanaerobium hydrogeniformans   3 3
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Enterococcus sp. 7L76   1 1
No Yes Enterococcus hirae ATCC 9790   2 2
No Yes Enterococcus faecalis 62   1 1
No Yes Leuconostoc sp. C2   1 1
No Yes Leuconostoc kimchii IMSNU 11154   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus plantarum JDM1   6 6
No Yes Lactobacillus buchneri NRRL B-30929   5 5
No Yes Lactobacillus buchneri   5 5
No Yes Lactobacillus brevis ATCC 367   1 1
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Pediococcus claussenii ATCC BAA-344   2 2
No Yes Lactococcus lactis subsp. cremoris MG1363   1 1
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus intermedius JTH08   1 1
No Yes Streptococcus equi subsp. equi 4047   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   2 2
No Yes Streptococcus uberis 0140J   1 1
No Yes Streptococcus pyogenes str. Manfredo   4 3
No Yes Streptococcus agalactiae A909   2 2
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Paenibacillus terrae HPL-003   3 1
No Yes Paenibacillus mucilaginosus 3016   3 3
No Yes Paenibacillus polymyxa M1   2 2
No Yes Listeria welshimeri serovar 6b str. SLCC5334   9 9
No Yes Listeria innocua Clip11262   20 19
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   31 24
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   33 31
No Yes Listeria ivanovii subsp. ivanovii PAM 55   31 28
No Yes Solibacillus silvestris StLB046   1 1
No Yes Lysinibacillus sphaericus C3-41   3 2
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus weihenstephanensis KBAB4   4 4
No Yes Bacillus thuringiensis str. Al Hakam   3 2
No Yes Bacillus cereus 03BB102   2 1
No Yes Bacillus anthracis str. A0248   2 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Candidatus Cloacamonas acidaminovorans   4 1
No Yes Pelodictyon phaeoclathratiforme BU-1   3 3
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   2 2
No Yes Chlorobium phaeobacteroides DSM 266   2 2
No Yes Chlorobium phaeovibrioides DSM 265   1 1
No Yes Chlorobium limicola DSM 245   2 2
No Yes Chlorobaculum parvum NCIB 8327   1 1
No Yes Chlorobium tepidum TLS   2 2
No Yes Chloroherpeton thalassium ATCC 35110   3 3
No Yes Prosthecochloris aestuarii DSM 271   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   18 14
No Yes Saprospira grandis str. Lewin   28 23
No Yes Chitinophaga pinensis DSM 2588   6 6
No Yes Flexibacter litoralis DSM 6794   15 11
No Yes Candidatus Amoebophilus asiaticus 5a2   3 3
No Yes Belliella baltica DSM 15883   3 1
No Yes Cyclobacterium marinum DSM 745   10 7
No Yes Marivirga tractuosa DSM 4126   9 5
No Yes Fibrella aestuarina   6 4
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Dyadobacter fermentans DSM 18053   10 5
No Yes Cytophaga hutchinsonii ATCC 33406   14 14
No Yes Spirosoma linguale DSM 74   3 3
No Yes Runella slithyformis DSM 19594   3 3
No Yes Parabacteroides distasonis ATCC 8503   5 3
No Yes Tannerella forsythia ATCC 43037   11 8
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Odoribacter splanchnicus DSM 20712   14 11
No Yes Bacteroides sp. CF50   3 3
No Yes Prevotella melaninogenica ATCC 25845   11 8
No Yes Prevotella intermedia 17   23 16
No Yes Prevotella denticola F0289   5 3
No Yes Prevotella ruminicola 23   8 3
No Yes Porphyromonas asaccharolytica DSM 20707   66 47
No Yes Porphyromonas gingivalis ATCC 33277   3 3
No Yes Alistipes finegoldii DSM 17242   12 10
No Yes Bacteroides salanitronis DSM 18170   2 2
No Yes Bacteroides helcogenes P 36-108   6 5
No Yes Bacteroides vulgatus ATCC 8482   2 2
No Yes Bacteroides thetaiotaomicron VPI-5482   7 7
No Yes Bacteroides fragilis YCH46   4 4
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Fluviicola taffensis DSM 16823   13 9
No Yes Owenweeksia hongkongensis DSM 17368   2 2
No Yes Zunongwangia profunda SM-A87   7 4
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Lacinutrix sp. 5H-3-7-4   2 2
No Yes Maribacter sp. HTCC2170   4 4
No Yes Robiginitalea biformata HTCC2501   2 2
No Yes Croceibacter atlanticus HTCC2559   6 3
No Yes Aequorivita sublithincola DSM 14238   25 7
No Yes Zobellia galactanivorans   2 2
No Yes Muricauda ruestringensis DSM 13258   3 3
No Yes Cellulophaga algicola DSM 14237   16 10
No Yes Cellulophaga lytica DSM 7489   8 8
No Yes Flavobacteriaceae bacterium 3519-10   2 2
No Yes Polaribacter sp. MED152   9 3
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga canimorsus Cc5   5 5
No Yes Capnocytophaga ochracea DSM 7271   11 11
No Yes Weeksella virosa DSM 16922   1 1
No Yes Flavobacterium indicum GPTSA100-9   2 2
No Yes Flavobacterium psychrophilum JIP02/86   15 15
No Yes Flavobacterium branchiophilum FL-15   5 5
No Yes Flavobacterium columnare ATCC 49512   3 2
No Yes Flavobacterium johnsoniae UW101   22 12
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   10 10
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Simkania negevensis Z   2 2
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Planctomyces brasiliensis DSM 5305   3 3
No Yes Planctomyces limnophilus DSM 3776   2 2
No Yes Rhodopirellula baltica SH 1   2 2
No Yes Pirellula staleyi DSM 6068   4 4
No Yes Coraliomargarita akajimensis DSM 45221   7 2
No Yes Fretibacterium fastidiosum   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   9 8
No Yes Leptospira interrogans serovar Lai str. IPAV   30 23
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Brachyspira murdochii DSM 12563   7 7
No Yes Brachyspira intermedia PWS/A   14 14
No Yes Brachyspira pilosicoli 95/1000   10 10
No Yes Brachyspira hyodysenteriae WA1   8 8
No Yes Spirochaeta smaragdinae DSM 11293   2 2
No Yes Sphaerochaeta coccoides DSM 17374   1 1
No Yes Spirochaeta caldaria DSM 7334   3 3
No Yes Treponema azotonutricium ZAS-9   13 7
No Yes Treponema primitia ZAS-2   12 9
No Yes Treponema brennaborense DSM 12168   2 2
No Yes Treponema paraluiscuniculi Cuniculi A   1 1
No Yes Treponema succinifaciens DSM 2489   3 3
No Yes Treponema pallidum subsp. pallidum SS14   2 2
No Yes Treponema denticola ATCC 35405   18 13
No Yes Spirochaeta africana DSM 8902   5 5
No Yes Desulfurispirillum indicum S5   2 2
No Yes Denitrovibrio acetiphilus DSM 12809   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes candidate division SR1 bacterium RAAC1_SR1_1   2 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Sulfurospirillum barnesii SES-3   1 1
No Yes Arcobacter sp. L   1 1
No Yes Arcobacter nitrofigilis DSM 7299   2 2
No Yes Arcobacter butzleri RM4018   1 1
No Yes Campylobacter concisus 13826   1 1
No Yes Sulfuricurvum kujiense DSM 16994   1 1
No Yes Helicobacter hepaticus ATCC 51449   2 2
No Yes Nitratiruptor sp. SB155-2   1 1
No Yes Syntrophobacter fumaroxidans MPOB   2 2
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Geobacter metallireducens GS-15   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   11 5
No Yes Sorangium cellulosum 'So ce 56'   12 7
No Yes Corallococcus coralloides DSM 2259   6 4
No Yes Myxococcus xanthus DK 1622   8 3
No Yes Myxococcus fulvus HW-1   9 5
No Yes Dechloromonas aromatica RCB   2 2
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   2 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Ralstonia solanacearum CFBP2957   5 4
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax citrulli AAC00-1   5 5
No Yes Acidovorax avenae subsp. avenae ATCC 19860   2 2
No Yes Comamonas testosteroni CNB-2   2 2
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Gallionella capsiferriformans ES-2   1 1
No Yes Methylotenera versatilis 301   1 1
No Yes Methylotenera mobilis JLW8   1 1
No Yes Methylobacillus flagellatus KT   1 1
No Yes Magnetococcus marinus MC-1   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Sphingomonas sp. MM-1   1 1
No Yes Pseudovibrio sp. FO-BEG1   2 2
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Rhodospirillum rubrum F11   2 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Candidatus Liberibacter asiaticus str. psy62   1 1
No Yes Bradyrhizobium japonicum USDA 110   2 2
No Yes Teredinibacter turnerae T7901   3 3
No Yes Gallibacterium anatis UMN179   1 1
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   3 3
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio harveyi ATCC BAA-1116   3 3
No Yes Vibrio vulnificus MO6-24/O   2 1
No Yes Photobacterium profundum SS9   2 2
No Yes Psychromonas ingrahamii 37   1 1
No Yes Ferrimonas balearica DSM 9799   4 3
No Yes Shewanella piezotolerans WP3   2 2
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   4 4
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   8 7
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   4 4
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Shewanella putrefaciens CN-32   2 2
No Yes Colwellia psychrerythraea 34H   4 3
No Yes Pseudoalteromonas sp. SM9913   2 2
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Hahella chejuensis KCTC 2396   6 5
No Yes Marinomonas sp. MWYL1   1 1
No Yes Methylomonas methanica MC09   5 4
No Yes Dichelobacter nodosus VCS1703A   2 1
No Yes Xanthomonas axonopodis pv. citri str. 306   2 2
No Yes Xanthomonas oryzae pv. oryzae PXO99A   2 2
No Yes Xanthomonas campestris pv. campestris str. B100   2 2
No Yes Thioalkalivibrio sp. K90mix   3 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes gamma proteobacterium HdN1   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Edwardsiella ictaluri 93-146   4 3
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   4 4
No Yes Yersinia pestis Pestoides F   3 3
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Sodalis glossinidius str. 'morsitans'   2 2
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   1 1
No Yes Shigella sonnei Ss046   11 10
No Yes Shigella flexneri 5 str. 8401   10 10
No Yes Shigella dysenteriae Sd197   11 11
No Yes Shigella boydii CDC 3083-94   9 9
No Yes Salmonella bongori NCTC 12419   7 5
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   2 2
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. TKP   7 6
No Yes Pseudomonas sp. UW4   5 5
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   2 2
No Yes Pseudomonas entomophila L48   8 8
No Yes Pseudomonas syringae pv. tomato str. DC3000   2 2
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   6 6
No Yes Pseudomonas protegens Pf-5   2 2
No Yes Pseudomonas fluorescens SBW25   6 5
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Pseudomonas sp. VLB120   6 6
No Yes Psychrobacter cryohalolentis K5   5 4
No Yes Methanosaeta concilii GP6   2 1
No Yes Methanosarcina acetivorans C2A   9 5
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosarcina barkeri str. Fusaro   9 5
No Yes Methanoculleus bourgensis MS2   3 2
No Yes Thermoplasmatales archaeon BRNA1   3 2
No Yes Methanococcus vannielii SB   2 1
No Yes Methanobrevibacter ruminantium M1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 394 327
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 255 178
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 249 180
No Yes Ascaris suum Victoria/Ghent Pig roundworm 74 60
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 278 159
No Yes Cryptococcus neoformans var. grubii H99   11 10
No Yes Cryptococcus neoformans B-3501A   13 11
No Yes Cryptococcus neoformans JEC21   12 10
No Yes Paracoccidioides brasiliensis Pb01   14 12
No Yes Paracoccidioides brasiliensis Pb03   13 11
No Yes Coccidioides posadasii str. Silveira   15 11
No Yes Coccidioides immitis RMSCC 3703   12 9
No Yes Coccidioides immitis RMSCC 2394   14 11
No Yes Coccidioides immitis H538.4   14 12
No Yes Ajellomyces dermatitidis ER-3   15 12
No Yes Histoplasma capsulatum H143   15 14
No Yes Histoplasma capsulatum H88   16 13
No Yes Histoplasma capsulatum G186AR   15 13
No Yes Aspergillus fumigatus A1163   13 10
No Yes Candida albicans WO-1   57 47
No Yes Saccharomyces cerevisiae UC5   13 9
No Yes Saccharomyces cerevisiae PW5   16 11
No Yes Saccharomyces cerevisiae FL100   8 5
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   11 7
No Yes Saccharomyces cerevisiae CBS7960   13 10
No Yes Saccharomyces cerevisiae YJM269   15 9
No Yes Saccharomyces cerevisiae T7   17 11
No Yes Saccharomyces cerevisiae FostersB   12 9
No Yes Saccharomyces cerevisiae FostersO   14 12
No Yes Saccharomyces cerevisiae VL3   13 11
No Yes Saccharomyces cerevisiae Vin13   12 11
No Yes Saccharomyces cerevisiae LalvinQA23   16 11
No Yes Saccharomyces cerevisiae AWRI796   16 11
No Yes Saccharomyces cerevisiae Sigma1278b   16 11
No Yes Saccharomyces cerevisiae W303   16 11
No Yes Saccharomyces cerevisiae JAY291   15 10
No Yes Saccharomyces cerevisiae AWRI1631   8 6
No Yes Saccharomyces cerevisiae YPS163   3 2
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae T73   3 2
No Yes Saccharomyces cerevisiae CLIB215   12 8
No Yes Saccharomyces cerevisiae Y10   3 3
No Yes Saccharomyces cerevisiae YJM789   16 11
No Yes Saccharomyces cerevisiae YJM789   16 11
No Yes Saccharomyces cerevisiae RM11-1a   17 11
No Yes Saccharomyces cerevisiae RM11-1a   15 10
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 17 11
No Yes Schizosaccharomyces pombe 972h-   13 11
No Yes Batrachochytrium dendrobatidis JEL423   30 30
No Yes Batrachochytrium dendrobatidis JAM81   36 35
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1135 814
No Yes Hordeum vulgare 22 Domesticated barley 2023 1639
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1488 1143
No Yes Trypanosoma brucei Lister 427 v4.1   96 64
No Yes Neospora caninum Nc-Liverpool 6.2   16 15
No Yes Plasmodium falciparum HB3   12 11
No Yes Plasmodium falciparum Dd2   6 6
No Yes Chamaesiphon minutus PCC 6605   20 17
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Crinalium epipsammum PCC 9333   8 8
No Yes Oscillatoria nigro-viridis PCC 7112   9 8
No Yes Oscillatoria acuminata PCC 6304   4 3
No Yes Cyanothece sp. PCC 7822   3 3
No Yes Cyanothece sp. PCC 7425   4 2
No Yes Cyanothece sp. PCC 7424   3 3
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   2 2
No Yes Cyanobacterium aponinum PCC 10605   2 2
No Yes Stanieria cyanosphaera PCC 7437   2 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   6 3
No Yes Cylindrospermum stagnale PCC 7417   6 4
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Mycoplasma bovis Hubei-1   1 1
No Yes Mycoplasma bovis PG45   1 1
No Yes Mycoplasma fermentans JER   2 2
No Yes Mycoplasma fermentans PG18   2 2
No Yes Mycoplasma agalactiae   1 1
No Yes Mycoplasma hyorhinis SK76   1 1
No Yes Mycoplasma hyorhinis MCLD   1 1
No Yes Mycoplasma hyorhinis HUB-1   1 1
No Yes Mycoplasma hyorhinis DBS 1050   1 1
No Yes Mycoplasma hyopneumoniae 168-L   1 1
No Yes Mycoplasma hyopneumoniae 7422   1 1
No Yes Mycoplasma hyopneumoniae 232   1 1
No Yes Mycoplasma hyopneumoniae 7448   1 1
No Yes Mycoplasma hyopneumoniae J   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   3 3
No Yes Streptomyces davawensis JCM 4913   2 2
No Yes Streptomyces fulvissimus DSM 40593   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   2 2
No Yes Amycolatopsis mediterranei RB   4 4
No Yes Amycolatopsis mediterranei S699   4 4
No Yes Amycolatopsis mediterranei S699   4 4
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Bifidobacterium thermophilum RBL67   2 2
No Yes Bifidobacterium animalis subsp. lactis Bl12   1 1
No Yes Bifidobacterium animalis subsp. lactis B420   1 1
No Yes Bifidobacterium animalis subsp. lactis BLC1   1 1
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   1 1
No Yes Bifidobacterium animalis subsp. lactis Bi-07   1 1
No Yes Bifidobacterium animalis subsp. lactis V9   1 1
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   1 1
No Yes Bifidobacterium animalis subsp. lactis BB-12   1 1
No Yes Bifidobacterium animalis subsp. lactis AD011   1 1
No Yes Actinomyces odontolyticus ATCC 17982   1 1
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   2 1
No Yes Erysipelothrix rhusiopathiae SY1027   2 2
No Yes Eubacterium siraeum V10Sc8a   6 5
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Ruminococcus champanellensis 18P13   23 13
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   4 4
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Coprococcus catus GD/7   2 2
No Yes Roseburia intestinalis XB6B4   7 5
No Yes Clostridium sp. SY8519   3 2
No Yes Clostridium saccharobutylicum DSM 13864   6 5
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   12 8
No Yes Clostridium kluyveri NBRC 12016   3 3
No Yes Clostridium tetani genome 12124569   6 3
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum H04402 065   8 5
No Yes Clostridium botulinum BKT015925   5 2
No Yes Clostridium botulinum F str. 230613   7 4
No Yes Clostridium botulinum F str. Langeland   8 5
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Clostridium botulinum B1 str. Okra   7 5
No Yes Clostridium botulinum Ba4 str. 657   7 4
No Yes Clostridium botulinum A2 str. Kyoto   8 5
No Yes Clostridium botulinum A3 str. Loch Maree   7 4
No Yes Clostridium botulinum A str. Hall   5 3
No Yes Clostridium botulinum A str. ATCC 19397   6 4
No Yes Clostridium acetobutylicum DSM 1731   8 6
No Yes Clostridium acetobutylicum EA 2018   8 6
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Carnobacterium maltaromaticum LMA28   3 3
No Yes Enterococcus mundtii QU 25   7 7
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   4 3
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   2 2
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   1 1
No Yes Lactobacillus amylovorus GRL 1112   1 1
No Yes Lactobacillus plantarum 16   6 6
No Yes Lactobacillus plantarum ZJ316   6 6
No Yes Lactobacillus plantarum subsp. plantarum ST-III   5 4
No Yes Lactobacillus plantarum subsp. plantarum P-8   4 4
No Yes Lactobacillus plantarum WCFS1   6 6
No Yes Lactobacillus brevis KB290   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis IO-1   2 2
No Yes Lactococcus lactis subsp. lactis CV56   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   1 1
No Yes Lactococcus lactis subsp. cremoris A76   1 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   1 1
No Yes Lactococcus lactis subsp. cremoris SK11   1 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   1 1
No Yes Streptococcus constellatus subsp. pharyngis C818   1 1
No Yes Streptococcus constellatus subsp. pharyngis C232   1 1
No Yes Streptococcus intermedius B196   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus anginosus C238   1 1
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   2 2
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   2 2
No Yes Streptococcus equi subsp. zooepidemicus   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   4 3
No Yes Streptococcus iniae SF1   2 2
No Yes Streptococcus pyogenes HSC5   4 3
No Yes Streptococcus pyogenes A20   4 3
No Yes Streptococcus pyogenes MGAS1882   4 3
No Yes Streptococcus pyogenes MGAS15252   4 3
No Yes Streptococcus pyogenes Alab49   4 3
No Yes Streptococcus pyogenes MGAS10750   4 3
No Yes Streptococcus pyogenes MGAS10270   4 3
No Yes Streptococcus pyogenes MGAS2096   4 3
No Yes Streptococcus pyogenes MGAS9429   4 3
No Yes Streptococcus pyogenes MGAS6180   4 3
No Yes Streptococcus pyogenes NZ131   5 4
No Yes Streptococcus pyogenes MGAS8232   4 3
No Yes Streptococcus pyogenes MGAS10394   4 3
No Yes Streptococcus pyogenes MGAS315   4 3
No Yes Streptococcus pyogenes SSI-1   4 3
No Yes Streptococcus pyogenes M1 476   4 3
No Yes Streptococcus pyogenes MGAS5005   4 3
No Yes Streptococcus pyogenes M1 GAS   4 3
No Yes Streptococcus pneumoniae A026   1 1
No Yes Streptococcus pneumoniae ST556   1 1
No Yes Streptococcus pneumoniae SPNA45   1 1
No Yes Streptococcus pneumoniae INV104   1 1
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae ATCC 700669   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   1 1
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae G54   1 1
No Yes Streptococcus pneumoniae JJA   1 1
No Yes Streptococcus pneumoniae 70585   1 1
No Yes Streptococcus pneumoniae Hungary19A-6   1 1
No Yes Streptococcus pneumoniae Taiwan19F-14   1 1
No Yes Streptococcus pneumoniae 670-6B   1 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus agalactiae ILRI112   3 2
No Yes Streptococcus agalactiae ILRI005   2 2
No Yes Streptococcus agalactiae 09mas018883   3 2
No Yes Streptococcus agalactiae 2-22   1 1
No Yes Streptococcus agalactiae GD201008-001   2 2
No Yes Streptococcus agalactiae NEM316   3 2
No Yes Streptococcus agalactiae 2603V/R   3 2
No Yes Streptococcus suis T15   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis ST3   1 1
No Yes Streptococcus suis D9   1 1
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis D12   1 1
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus sp. Y412MC10   4 4
No Yes Paenibacillus mucilaginosus KNP414   3 3
No Yes Paenibacillus mucilaginosus K02   3 3
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Listeria monocytogenes EGD sequence   26 24
No Yes Listeria monocytogenes N53-1   18 17
No Yes Listeria monocytogenes La111   19 18
No Yes Listeria monocytogenes serotype 4b str. LL195   32 30
No Yes Listeria monocytogenes 07PF0776   29 27
No Yes Listeria monocytogenes M7   24 23
No Yes Listeria monocytogenes J1-220   32 29
No Yes Listeria monocytogenes J1816   27 27
No Yes Listeria monocytogenes SLCC2376   29 27
No Yes Listeria monocytogenes SLCC5850   26 24
No Yes Listeria monocytogenes ATCC 19117   33 30
No Yes Listeria monocytogenes L312   33 31
No Yes Listeria monocytogenes SLCC2479   27 24
No Yes Listeria monocytogenes SLCC7179   25 23
No Yes Listeria monocytogenes SLCC2540   40 36
No Yes Listeria monocytogenes SLCC2378   31 28
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   36 30
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   26 24
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   33 27
No Yes Listeria monocytogenes 08-5578   24 22
No Yes Listeria monocytogenes 08-5923   24 22
No Yes Listeria monocytogenes L99   24 22
No Yes Listeria monocytogenes HCC23   23 22
No Yes Listeria monocytogenes 10403S   26 24
No Yes Listeria monocytogenes J0161   27 26
No Yes Listeria monocytogenes Finland 1998   25 23
No Yes Listeria monocytogenes FSL R2-561   26 24
No Yes Listeria monocytogenes serotype 4b str. F2365   31 28
No Yes Listeria monocytogenes EGD-e   26 24
No Yes Bacillus toyonensis BCT-7112   2 2
No Yes Bacillus thuringiensis HD-771   4 3
No Yes Bacillus thuringiensis HD-789   3 2
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   2 2
No Yes Bacillus thuringiensis YBT-1518   2 2
No Yes Bacillus thuringiensis Bt407   2 2
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   2 2
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   2 2
No Yes Bacillus thuringiensis BMB171   2 2
No Yes Bacillus thuringiensis serovar finitimus YBT-020   3 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   2 2
No Yes Bacillus cereus FRI-35   2 2
No Yes Bacillus cereus biovar anthracis str. CI   3 2
No Yes Bacillus cereus AH820   2 2
No Yes Bacillus cereus AH187   2 2
No Yes Bacillus cereus B4264   4 4
No Yes Bacillus cereus G9842   3 3
No Yes Bacillus cereus Q1   2 2
No Yes Bacillus cereus F837/76   3 2
No Yes Bacillus cereus NC7401   2 2
No Yes Bacillus cereus E33L   3 2
No Yes Bacillus cereus ATCC 14579   5 5
No Yes Bacillus cereus ATCC 10987   3 2
No Yes Bacillus anthracis str. H9401   3 2
No Yes Bacillus anthracis str. CDC 684   3 2
No Yes Bacillus anthracis str. 'Ames Ancestor'   2 1
No Yes Bacillus anthracis str. Sterne   2 1
No Yes Bacillus anthracis str. Ames   2 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Echinicola vietnamensis DSM 17526   7 4
No Yes Emticicia oligotrophica DSM 17448   3 3
No Yes Prevotella sp. oral taxon 299 str. F0039   8 7
No Yes Prevotella dentalis DSM 3688   9 7
No Yes Porphyromonas gingivalis TDC60   4 3
No Yes Porphyromonas gingivalis W83   4 3
No Yes Alistipes shahii WAL 8301   9 8
No Yes Bacteroides xylanisolvens XB1A   8 8
No Yes Bacteroides fragilis 638R   5 5
No Yes Bacteroides fragilis NCTC 9343   3 3
No Yes Nonlabens dokdonensis DSW-6   12 8
No Yes Psychroflexus torquis ATCC 700755   13 5
No Yes Riemerella anatipestifer RA-CH-2   1 1
No Yes Riemerella anatipestifer RA-CH-1   2 2
No Yes Riemerella anatipestifer RA-GD   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   6 6
No Yes Leptospira interrogans serovar Lai str. 56601   28 22
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   28 22
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Brachyspira pilosicoli WesB   6 6
No Yes Brachyspira pilosicoli B2904   8 8
No Yes Brachyspira pilosicoli P43/6/78   8 8
No Yes Treponema pedis str. T A4   10 10
No Yes Treponema pallidum str. Fribourg-Blanc   1 1
No Yes Treponema pallidum subsp. pertenue str. Gauthier   1 1
No Yes Treponema pallidum subsp. pertenue str. CDC2   1 1
No Yes Treponema pallidum subsp. pertenue str. SamoaD   1 1
No Yes Treponema pallidum subsp. pallidum str. Mexico A   1 1
No Yes Treponema pallidum subsp. pallidum str. Chicago   1 1
No Yes Treponema pallidum subsp. pallidum DAL-1   1 1
No Yes Treponema pallidum subsp. pallidum str. Nichols   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Arcobacter butzleri 7h1h   1 1
No Yes Arcobacter butzleri ED-1   1 1
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   1 1
No Yes Sorangium cellulosum So0157-2   10 6
No Yes Myxococcus stipitatus DSM 14675   3 2
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Pandoraea pnomenusa 3kgm   1 1
No Yes Ralstonia solanacearum FQY_4   3 2
No Yes Ralstonia solanacearum Po82   4 4
No Yes Ralstonia solanacearum PSI07   4 4
No Yes Ralstonia solanacearum CMR15   5 4
No Yes Ralstonia solanacearum GMI1000   4 3
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Taylorella asinigenitalis 14/45   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Leisingera methylohalidivorans DSM 14336   1 1
No Yes Rhodospirillum rubrum ATCC 11170   2 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   2 2
No Yes Bradyrhizobium japonicum USDA 6   2 2
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio nigripulchritudo VibrioScope   2 1
No Yes Vibrio vulnificus CMCP6   2 1
No Yes Vibrio vulnificus YJ016   2 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   2 2
No Yes Glaciecola psychrophila 170   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   2 2
No Yes Alteromonas macleodii AltDE1   2 2
No Yes Alcanivorax dieselolei B5   1 1
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   2 2
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   2 2
No Yes Xanthomonas axonopodis pv. citrumelo F1   2 2
No Yes Xanthomonas axonopodis Xac29-1   2 2
No Yes Xanthomonas oryzae pv. oryzicola BLS256   2 2
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   2 2
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   2 2
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   2 2
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   2 2
No Yes Thioalkalivibrio nitratireducens DSM 14787   1 1
No Yes Thioflavicoccus mobilis 8321   2 1
No Yes Coxiella burnetii CbuK_Q154   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Yersinia pseudotuberculosis PB1/+   5 4
No Yes Yersinia pseudotuberculosis YPIII   6 6
No Yes Yersinia pseudotuberculosis IP 32953   5 4
No Yes Yersinia pestis biovar Microtus str. 91001   6 6
No Yes Yersinia pestis A1122   4 4
No Yes Yersinia pestis Z176003   7 7
No Yes Yersinia pestis D182038   7 7
No Yes Yersinia pestis D106004   7 7
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   6 6
No Yes Yersinia pestis Nepal516   5 5
No Yes Yersinia pestis Antiqua   7 7
No Yes Yersinia pestis Angola   3 3
No Yes Yersinia pestis CO92   5 5
No Yes Yersinia pestis KIM10+   5 5
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Shigella sonnei 53G   11 10
No Yes Shigella flexneri 2002017   14 14
No Yes Shigella flexneri 2a str. 2457T   6 6
No Yes Shigella flexneri 2a str. 301   10 10
No Yes Shigella dysenteriae 1617   12 12
No Yes Shigella boydii Sb227   10 10
No Yes Salmonella bongori N268-08   8 6
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   7 7
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   2 2
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   2 2
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   2 2
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   3 3
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   3 3
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   3 3
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   3 3
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   2 2
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   2 2
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   2 2
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   3 3
No Yes Escherichia coli E24377A   2 2
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli 042   3 3
No Yes Escherichia coli Xuzhou21   6 6
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli IAI39   2 2
No Yes Escherichia coli UMN026   3 3
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   2 2
No Yes Escherichia coli DH1   2 2
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   4 4
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli O103:H2 str. 12009   4 4
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   5 5
No Yes Escherichia coli O55:H7 str. CB9615   6 6
No Yes Escherichia coli O26:H11 str. 11368   3 3
No Yes Escherichia coli O111:H- str. 11128   2 2
No Yes Escherichia coli O157:H7 str. TW14359   5 5
No Yes Escherichia coli O157:H7 str. EC4115   4 4
No Yes Escherichia coli O157:H7 str. Sakai   4 4
No Yes Escherichia coli O157:H7 str. EDL933   5 5
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas stutzeri DSM 4166   1 1
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   7 7
No Yes Pseudomonas monteilii SB3078   7 7
No Yes Pseudomonas putida H8234   4 4
No Yes Pseudomonas putida HB3267   7 7
No Yes Pseudomonas putida NBRC 14164   6 6
No Yes Pseudomonas putida DOT-T1E   6 6
No Yes Pseudomonas putida S16   6 6
No Yes Pseudomonas putida BIRD-1   6 6
No Yes Pseudomonas putida W619   7 7
No Yes Pseudomonas putida ND6   6 6
No Yes Pseudomonas putida KT2440   6 6
No Yes Pseudomonas putida GB-1   6 6
No Yes Pseudomonas protegens CHA0   2 2
No Yes Pseudomonas poae RE*1-1-14   6 5
No Yes Pseudomonas fluorescens F113   2 2
No Yes Pseudomonas fluorescens A506   7 6
No Yes Pseudomonas fluorescens R124   6 4
No Yes Pseudomonas fluorescens Pf0-1   8 5
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Methanolobus psychrophilus R15   2 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   2 1
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   12 7
No Yes Methanococcus maripaludis C6   1 1
No Yes Methanococcus maripaludis C7   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 848 717
No Yes Homo sapiens (NCBI version) Human 389 319
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 264 215
No Yes Heliconius numata (Incomplete)   25 25
No Yes Loa loa v3.3 (Request) Eye worm 65 52
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 68 62
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 44
No Yes Moniliophthora perniciosa FA553 (Genome survey)   4 4
No Yes Encephalitozoon intestinalis (endoparasite)   5 5
No Yes Encephalitozoon cuniculi (endoparasite)   5 5
No Yes Picea sitchensis (Incomplete) Sitka spruce 18 18
No Yes Lotus japonicus (Early assembly)   621 547
No Yes Malus x domestica (Duplicate) Apple 3041 2318
No Yes Ricinus communis (Early assembly) Castor bean 615 482
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1025 838
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 778 615
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 814 638
No Yes Phoenix dactylifera (Early draft) Date palm 264 212
No Yes Acholeplasma laidlawii PG-8A (duplicate)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   2 2
No Yes Homo sapiens 69_37 Human 266 223
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 251 207
No Yes Gorilla gorilla 69_3.1 Western gorilla 274 223
No Yes Pongo abelii 69_2 Sumatran orangutan 240 201
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 235 189
No Yes Macaca mulatta 69_1 Rhesus monkey 255 210
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 267 222
No Yes Otolemur garnettii 69_3 Small-eared galago 265 213
No Yes Microcebus murinus 69_1 Gray mouse lemur 211 169
No Yes Rattus norvegicus 69_3.4 Norway rat 259 209
No Yes Mus musculus 69_38 House mouse 267 218
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 197 163
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 254 210
No Yes Cavia porcellus 69_3 Domestic guinea pig 256 215
No Yes Oryctolagus cuniculus 69_2 Rabbit 247 201
No Yes Ochotona princeps 69 American pika 195 160
No Yes Tupaia belangeri 69 Northern tree shrew 177 149
No Yes Sus scrofa 69_10.2 Pig 258 213
No Yes Bos taurus 69_3.1 Cattle 257 211
No Yes Vicugna pacos 69_1 Alpaca 130 112
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 221 183
No Yes Mustela putorius furo 69_1.0 Domestic ferret 262 212
No Yes Ailuropoda melanoleuca 69_1 Giant panda 252 206
No Yes Canis familiaris 69_3.1 Dog 262 217
No Yes Felis catus 69 Domestic cat 179 148
No Yes Equus caballus 69_2 Horse 249 204
No Yes Myotis lucifugus 69_2.0 Little brown bat 240 201
No Yes Pteropus vampyrus 69_1 Large flying fox 222 178
No Yes Sorex araneus 69_1 European shrew 160 126
No Yes Erinaceus europaeus 69 Western European hedgehog 185 151
No Yes Procavia capensis 69_1 Cape rock hyrax 178 144
No Yes Loxodonta africana 69_3 African savanna elephant 262 216
No Yes Echinops telfairi 69 Small Madagascar hedgehog 184 152
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 158 137
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 138 111
No Yes Macropus eugenii 69_1.0 Tammar wallaby 204 159
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 241 194
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 243 193
No Yes Ornithorhynchus anatinus 69_5 Platypus 219 191
No Yes Petromyzon marinus 69_7.0 Sea lamprey 313 294
No Yes Meleagris gallopavo 69_2 Turkey 213 173
No Yes Gallus gallus 69_2 Chicken 218 174
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 214 173
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 241 201
No Yes Anolis carolinensis 69_2.0 Green anole 245 194
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 267 206
No Yes Latimeria chalumnae 69_1 Coelacanth 274 226
No Yes Gadus morhua 69_1 Atlantic cod 289 232
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 276 231
No Yes Takifugu rubripes 69_4 Torafugu 287 235
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 302 246
No Yes Oryzias latipes 69_1 Japanese medaka 279 221
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 328 268
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 307 250
No Yes Danio rerio 69_9 Zebrafish 333 269
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 74 58
No Yes Ciona intestinalis 69 Vase tunicate 133 113
No Yes Drosophila melanogaster 69_5 Fruit fly 158 109
No Yes Caenorhabditis elegans 69_215 Roundworm 240 132
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 16 11
No Yes Arabidopsis thaliana 10 Thale cress 633 523
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   7 7
No Yes 2_050719S (meta-genome)   3 3
No Yes 2_Base_of_chrolophyll_max (meta-genome)   4 3
No Yes 3_050719R (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   5 5
No Yes 4_050719Q (meta-genome)   5 5
No Yes 4_Deep_abyss (meta-genome)   15 15
No Yes 5_050719P (meta-genome)   3 3
No Yes 5_Below_upper_mesopelagic (meta-genome)   5 5
No Yes 6_Upper_euphotic (meta-genome)   11 10
No Yes 7_Oxygen_minimum_layer (meta-genome)   12 12
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   4 4
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   3 3
No Yes Combined (meta-genome)   49 49
No Yes Core Eukaryotic Genes 458 (CEGMA)   6 6
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   38 38
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   11 11
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   13 11
No Yes Dump bottom (Dump bottom) (meta-genome)   26 25
No Yes Dump top (Dump top) (meta-genome)   25 24
No Yes Endophytic microbiome from Rice (meta-genome)   72 71
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   26 19
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   12 12
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   18 18
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   15 15
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   25 25
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   33 33
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   10 10
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   10 10
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   9 8
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   7 6
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   15 15
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   11 11
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome)   4 4
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   252 241
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   11 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   4 4
No Yes Human Gut Community Subject 7 (meta-genome)   14 12
No Yes Human Gut Community Subject 8 (meta-genome)   32 29
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   104 102
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   16 16
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   24 21
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   82 77
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   20 18
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   26 23
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   20 20
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   10 10
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   15 15
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   25 20
No Yes Mouse Gut Community lean1 (meta-genome)   3 3
No Yes Mouse Gut Community lean2 (meta-genome)   6 6
No Yes Mouse Gut Community lean3 (meta-genome)   4 4
No Yes Mouse Gut Community ob1 (meta-genome)   5 5
No Yes Mouse Gut Community ob2 (meta-genome)   2 2
No Yes NCBI 2017_08 genome   403118 331683
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   48 47
No Yes Protozoadb 2010_08 (Protozoadb)   5369 3550
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   15 15
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   15 15
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   11 11
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   1 1
No Yes Single-cell genome from subgingival tooth surface TM7b (meta-genome)   1 1
No Yes Single-cell genome from subgingival tooth surface TM7c (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   8 7
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   39 35
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   86 85
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   20 20
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   9 9
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   31 31
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   32 32
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   27 27
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   9 8
No Yes STRING v9.0.5 (STRING)   25714 20060
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   7 7
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   65 63
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   7 7
No Yes Termite Protist Endosymbiont Community (meta-genome)   79 78
No Yes Uniprot 2018_03 genome   298005 237507
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   15 13
No Yes Global Ocean Sampling Expedition (GOS)   1929 1825
No Yes NCBI plasmid sequences (Plasmids)   150 132
No Yes NCBI viral sequences (Viral)   229 196
No Yes PDB chains (SCOP 1.75) (PDB)   63 49
No Yes Protein Data Bank (all PDB sequenc)   1199 831
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1482 1361
No Yes TargetDB (Targets)   634 552
No Yes The Salmonella enterica Pan-genome (meta-genome)   67 67
No Yes UniProt viral sequences (Viral)   51 41

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]