SUPERFAMILY 1.75 HMM library and genome assignments server

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Aspartate/glutamate racemase family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 7 significant domains in 4 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1b74A   1.51e-42   0.00000599   108-204   1b74 A:106-252  
  4.35e-37   0.00000359   1-103   1b74 A:1-105  
1iu9A   2.52e-29   0.0000105   2-110   1iu9 A:  
1jflA   6.17e-46   0.00000483   1-110   1jfl A:1-115  
  1.1e-29   0.0000121   117-226   1jfl A:116-228  
2dx7A   6.76e-44   0.00000586   1-110   1jfl A:1-115  
  1.1e-29   0.0000121   117-226   1jfl A:116-228  

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Select to display   Genome       Domains   Proteins
No Yes ALL   53487 53487
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Eggerthella sp. YY7918   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Olsenella uli DSM 7084   1 1
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Acidimicrobium ferrooxidans DSM 10331   1 1
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Isoptericola variabilis 225   1 1
No Yes Xylanimonas cellulosilytica DSM 15894   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Truepera radiovictrix DSM 17093   2 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Oceanithermus profundus DSM 14977   1 1
No Yes Marinithermus hydrothermalis DSM 14884   2 1
No Yes Thermus sp. CCB_US3_UF1   2 1
No Yes Thermus scotoductus SA-01   2 1
No Yes Thermus thermophilus HB27   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   1 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Clostridium clariflavum DSM 19732   2 1
No Yes Clostridium thermocellum ATCC 27405   2 1
No Yes Ethanoligenens harbinense YUAN-3   1 1
No Yes Faecalibacterium prausnitzii   1 1
No Yes Ruminococcus sp.   2 1
No Yes Ruminococcus bromii   1 1
No Yes Thermaerobacter marianensis DSM 12885   1 1
No Yes butyrate-producing bacterium SM4/1   2 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Thermincola potens JR   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   2 2
No Yes Clostridium difficile 630   1 1
No Yes Clostridium sticklandii DSM 519   1 1
No Yes Filifactor alocis ATCC 35896   1 1
No Yes Clostridium saccharolyticum WM1   2 1
No Yes Clostridium phytofermentans ISDg   2 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   2 1
No Yes [Ruminococcus] torques   2 1
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium tetani E88   1 1
No Yes Mahella australiensis 50-1 BON   2 1
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   2 1
No Yes Caldicellulosiruptor kronotskyensis 2002   2 1
No Yes Caldicellulosiruptor hydrothermalis 108   2 1
No Yes Caldicellulosiruptor owensensis OL   2 1
No Yes Caldicellulosiruptor lactoaceticus 6A   2 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   2 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 1
No Yes Caldicellulosiruptor bescii DSM 6725   2 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Coprothermobacter proteolyticus DSM 5265   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Thermoanaerobacter tengcongensis MB4   2 2
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Acetohalobium arabaticum DSM 5501   2 2
No Yes Halothermothrix orenii H 168   1 1
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Aerococcus urinae ACS-120-V-Col10a   1 1
No Yes Tetragenococcus halophilus NBRC 12172   1 1
No Yes Melissococcus plutonius DAT561   1 1
No Yes Enterococcus sp. 7L76   1 1
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Leuconostoc sp. C2   1 1
No Yes Leuconostoc kimchii IMSNU 11154   1 1
No Yes Leuconostoc citreum KM20   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   1 1
No Yes Leuconostoc gasicomitatum LMG 18811   1 1
No Yes Lactobacillus sanfranciscensis TMW 1.1304   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactobacillus buchneri   1 1
No Yes Pediococcus claussenii ATCC BAA-344   1 1
No Yes Lactococcus garvieae ATCC 49156   1 1
No Yes Lactococcus lactis subsp. cremoris MG1363   1 1
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus sp. I-G2   2 1
No Yes Streptococcus intermedius JTH08   1 1
No Yes Streptococcus gallolyticus UCN34   1 1
No Yes Streptococcus pseudopneumoniae IS7493   2 1
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   1 1
No Yes Streptococcus macedonicus ACA-DC 198   1 1
No Yes Streptococcus mitis B6   2 1
No Yes Streptococcus uberis 0140J   1 1
No Yes Streptococcus parauberis KCTC 11537   1 1
No Yes Streptococcus parasanguinis ATCC 15912   2 1
No Yes Streptococcus pneumoniae P1031   2 1
No Yes Streptococcus thermophilus LMD-9   1 1
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus sanguinis SK36   1 1
No Yes Streptococcus salivarius 57.I   1 1
No Yes Streptococcus oralis Uo5   2 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Exiguobacterium sp. MH3   1 1
No Yes Exiguobacterium sp. AT1b   2 1
No Yes Exiguobacterium sibiricum 255-15   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Lysinibacillus sphaericus C3-41   2 2
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Anoxybacillus flavithermus WK1   1 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5   1 1
No Yes Geobacillus kaustophilus HTA426   1 1
No Yes Geobacillus sp. GHH01   1 1
No Yes Geobacillus sp. WCH70   1 1
No Yes Halobacillus halophilus DSM 2266   2 2
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus cellulosilyticus DSM 2522   2 2
No Yes Bacillus pumilus SAFR-032   3 2
No Yes Bacillus megaterium DSM 319   1 1
No Yes Bacillus coagulans 2-6   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus lugdunensis HKU09-01   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Staphylococcus aureus subsp. aureus JH1   1 1
No Yes Staphylococcus aureus   1 1
No Yes Candidatus Cloacamonas acidaminovorans   2 1
No Yes Melioribacter roseus P3M   2 1
No Yes Ignavibacterium album JCM 16511   2 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Chlorobium phaeovibrioides DSM 265   2 1
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   1 1
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   2 1
No Yes Prosthecochloris aestuarii DSM 271   1 1
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Waddlia chondrophila WSU 86-1044   1 1
No Yes Thermovirga lienii DSM 17291   1 1
No Yes Aminobacterium colombiense DSM 12261   1 1
No Yes Anaerobaculum mobile DSM 13181   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Thermodesulfatator indicus DSM 15286   2 1
No Yes Thermodesulfobacterium sp. OPB45   2 1
No Yes Desulfurispirillum indicum S5   1 1
No Yes Calditerrivibrio nitroreducens DSM 19672   2 1
No Yes Denitrovibrio acetiphilus DSM 12809   2 1
No Yes Deferribacter desulfuricans SSM1   2 1
No Yes Flexistipes sinusarabici DSM 4947   2 1
No Yes Petrotoga mobilis SJ95   1 1
No Yes Thermotoga lettingae TMO   1 1
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Thermovibrio ammonificans HB-1   2 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   2 1
No Yes Sulfurihydrogenibium sp. YO3AOP1   2 1
No Yes Sulfurihydrogenibium azorense Az-Fu1   2 1
No Yes Persephonella marina EX-H1   2 1
No Yes Hydrogenobaculum sp. SN   2 1
No Yes Hydrogenobaculum sp. HO   2 1
No Yes Hydrogenobaculum sp. Y04AAS1   2 1
No Yes Thermocrinis albus DSM 14484   2 1
No Yes Aquifex aeolicus VF5   2 1
No Yes Hydrogenobacter thermophilus TK-6   2 1
No Yes Elusimicrobium minutum Pei191   2 1
No Yes uncultured Termite group 1 bacterium phylotype Rs-D17   2 1
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Thermodesulfovibrio yellowstonii DSM 11347   2 1
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes Streptobacillus moniliformis DSM 12112   1 1
No Yes Sebaldella termitidis ATCC 33386   2 1
No Yes Leptotrichia buccalis C-1013-b   2 1
No Yes Ilyobacter polytropus DSM 2926   3 2
No Yes Bdellovibrio bacteriovorus HD100   2 1
No Yes Nautilia profundicola AmH   1 1
No Yes Campylobacter hominis ATCC BAA-381   1 1
No Yes Campylobacter lari RM2100   1 1
No Yes Campylobacter curvus 525.92   2 2
No Yes Campylobacter concisus 13826   2 2
No Yes Campylobacter jejuni subsp. doylei 269.97   1 1
No Yes Campylobacter sp. 03-427   1 1
No Yes Campylobacter fetus subsp. fetus 82-40   1 1
No Yes uncultured Sulfuricurvum sp. RIFRC-1   1 1
No Yes Sulfuricurvum kujiense DSM 16994   1 1
No Yes Sulfurimonas denitrificans DSM 1251   1 1
No Yes Wolinella succinogenes DSM 1740   1 1
No Yes Helicobacter cetorum MIT 00-7128   1 1
No Yes Helicobacter bizzozeronii CIII-1   1 1
No Yes Helicobacter hepaticus ATCC 51449   1 1
No Yes Helicobacter mustelae 12198   1 1
No Yes Helicobacter felis ATCC 49179   1 1
No Yes Helicobacter cinaedi PAGU611   1 1
No Yes Helicobacter acinonychis str. Sheeba   1 1
No Yes Helicobacter pylori B38   1 1
No Yes Nitratiruptor sp. SB155-2   1 1
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophus aciditrophicus SB   1 1
No Yes Syntrophobacter fumaroxidans MPOB   2 2
No Yes Desulfurivibrio alkaliphilus AHT2   2 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   2 1
No Yes Desulfobacterium autotrophicum HRM2   1 1
No Yes Desulfococcus oleovorans Hxd3   2 1
No Yes Desulfomicrobium baculatum DSM 4028   1 1
No Yes Desulfovibrio piezophilus   1 1
No Yes Desulfovibrio aespoeensis Aspo-2   1 1
No Yes Lawsonia intracellularis PHE/MN1-00   1 1
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Desulfovibrio alaskensis G20   1 1
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   1 1
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   1 1
No Yes Hippea maritima DSM 10411   2 1
No Yes Geobacter daltonii FRC-32   2 1
No Yes Geobacter sp. M21   2 1
No Yes Geobacter uraniireducens Rf4   2 1
No Yes Geobacter lovleyi SZ   2 1
No Yes Geobacter bemidjiensis Bem   2 1
No Yes Geobacter sulfurreducens KN400   2 1
No Yes Geobacter metallireducens GS-15   1 1
No Yes Pelobacter propionicus DSM 2379   2 1
No Yes Pelobacter carbinolicus DSM 2380   2 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   2 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   2 1
No Yes Stigmatella aurantiaca DW4/3-1   2 1
No Yes Corallococcus coralloides DSM 2259   2 1
No Yes Myxococcus xanthus DK 1622   2 1
No Yes Myxococcus fulvus HW-1   2 1
No Yes Thauera sp. MZ1T   2 1
No Yes Azoarcus sp. KH32C   3 2
No Yes Azoarcus sp. BH72   1 1
No Yes Aromatoleum aromaticum EbN1   2 1
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Neisseria meningitidis alpha14   1 1
No Yes Neisseria meningitidis FAM18   1 1
No Yes Neisseria lactamica 020-06   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Thiomonas arsenitoxydans   1 1
No Yes Thiomonas intermedia K12   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   2 2
No Yes Burkholderia xenovorans LB400   1 1
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   1 1
No Yes Burkholderia sp. CCGE1002   2 2
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Ramlibacter tataouinensis TTB310   2 2
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Thiobacillus denitrificans ATCC 25259   2 1
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Magnetococcus marinus MC-1   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Magnetospirillum magneticum AMB-1   2 2
No Yes Parvibaculum lavamentivorans DS-1   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Idiomarina loihiensis L2TR   1 1
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Dickeya dadantii Ech703   2 2
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Thermococcus sp. 4557   2 1
No Yes Thermococcus onnurineus NA1   2 1
No Yes Thermococcus kodakarensis KOD1   2 1
No Yes Thermococcus gammatolerans EJ3   2 1
No Yes Thermococcus sibiricus MM 739   2 1
No Yes Thermococcus barophilus MP   2 1
No Yes Pyrococcus sp. ST04   2 1
No Yes Pyrococcus yayanosii CH1   2 1
No Yes Pyrococcus horikoshii OT3   2 1
No Yes Pyrococcus abyssi GE5   2 1
No Yes Pyrococcus furiosus COM1   2 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Rhodococcus erythropolis CCM2595   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   1 1
No Yes Thermus oshimai JL-2   2 1
No Yes Thermus thermophilus JL-18   1 1
No Yes Thermus thermophilus SG0.5JP17-16   1 1
No Yes Thermus thermophilus HB8   1 1
No Yes Clostridium thermocellum DSM 1313   2 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   3 2
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   2 2
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   2 1
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Melissococcus plutonius ATCC 35311   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecium NRRL B-2354   1 1
No Yes Enterococcus faecium DO   1 1
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Leuconostoc carnosum JB16   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   1 1
No Yes Leuconostoc gelidum JB7   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactococcus garvieae Lg2   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis IO-1   1 1
No Yes Lactococcus lactis subsp. lactis KF147   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   1 1
No Yes Lactococcus lactis subsp. cremoris A76   1 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   1 1
No Yes Lactococcus lactis subsp. cremoris SK11   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus anginosus C238   1 1
No Yes Streptococcus anginosus C1051   2 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   1 1
No Yes Streptococcus lutetiensis 033   1 1
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus iniae SF1   1 1
No Yes Streptococcus parasanguinis FW213   2 1
No Yes Streptococcus pneumoniae A026   2 1
No Yes Streptococcus pneumoniae ST556   2 1
No Yes Streptococcus pneumoniae SPNA45   2 1
No Yes Streptococcus pneumoniae SPN994039   2 1
No Yes Streptococcus pneumoniae SPN994038   2 1
No Yes Streptococcus pneumoniae SPN034183   1 1
No Yes Streptococcus pneumoniae SPN034156   2 1
No Yes Streptococcus pneumoniae INV104   2 1
No Yes Streptococcus pneumoniae INV200   2 1
No Yes Streptococcus pneumoniae OXC141   2 1
No Yes Streptococcus pneumoniae gamPNI0373   2 1
No Yes Streptococcus pneumoniae AP200   2 1
No Yes Streptococcus pneumoniae ATCC 700669   2 1
No Yes Streptococcus pneumoniae TCH8431/19A   2 1
No Yes Streptococcus pneumoniae CGSP14   2 1
No Yes Streptococcus pneumoniae G54   2 1
No Yes Streptococcus pneumoniae JJA   2 1
No Yes Streptococcus pneumoniae 70585   2 1
No Yes Streptococcus pneumoniae Hungary19A-6   2 1
No Yes Streptococcus pneumoniae Taiwan19F-14   2 1
No Yes Streptococcus pneumoniae D39   2 1
No Yes Streptococcus pneumoniae 670-6B   2 1
No Yes Streptococcus pneumoniae R6   2 1
No Yes Streptococcus pneumoniae TIGR4   2 1
No Yes Streptococcus thermophilus CNRZ1066   1 1
No Yes Streptococcus suis T15   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis ST3   1 1
No Yes Streptococcus suis D9   1 1
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis D12   1 1
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Streptococcus salivarius CCHSS3   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Thermobacillus composti KWC4   2 2
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   1 1
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   1 1
No Yes Listeria monocytogenes 08-5923   1 1
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   1 1
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Geobacillus sp. C56-T3   1 1
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Amphibacillus xylanus NBRC 15112   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   3 2
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   3 2
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Bacillus coagulans 36D1   1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   1 1
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Staphylococcus lugdunensis N920143   1 1
No Yes Staphylococcus warneri SG1   1 1
No Yes Staphylococcus aureus CA-347   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus M1   1 1
No Yes Staphylococcus aureus 08BA02176   1 1
No Yes Staphylococcus aureus ST228/18412   1 1
No Yes Staphylococcus aureus ST228/18341   1 1
No Yes Staphylococcus aureus ST228/16125   1 1
No Yes Staphylococcus aureus ST228/16035   1 1
No Yes Staphylococcus aureus ST228/15532   1 1
No Yes Staphylococcus aureus ST228/10497   1 1
No Yes Staphylococcus aureus ST228/10388   1 1
No Yes Staphylococcus aureus 04-02981   1 1
No Yes Staphylococcus aureus RF122   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus 6850   1 1
No Yes Staphylococcus aureus subsp. aureus SA957   1 1
No Yes Staphylococcus aureus subsp. aureus CN1   1 1
No Yes Staphylococcus aureus subsp. aureus SA40   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus M013   1 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   1 1
No Yes Staphylococcus aureus subsp. aureus VC40   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   1 1
No Yes Staphylococcus aureus subsp. aureus LGA251   1 1
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   1 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   1 1
No Yes Staphylococcus aureus subsp. aureus ED133   1 1
No Yes Staphylococcus aureus subsp. aureus ED98   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   1 1
No Yes Staphylococcus aureus subsp. aureus TCH60   1 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   1 1
No Yes Staphylococcus aureus subsp. aureus 71193   1 1
No Yes Staphylococcus aureus subsp. aureus S0385   1 1
No Yes Staphylococcus aureus subsp. aureus str. Newman   1 1
No Yes Staphylococcus aureus subsp. aureus Mu3   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   1 1
No Yes Staphylococcus aureus subsp. aureus JH9   1 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   1 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   1 1
No Yes Staphylococcus aureus subsp. aureus MW2   1 1
No Yes Staphylococcus aureus subsp. aureus N315   1 1
No Yes Staphylococcus aureus subsp. aureus Mu50   1 1
No Yes Staphylococcus aureus subsp. aureus COL   1 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   1 1
No Yes Chlorobium phaeobacteroides BS1   2 1
No Yes Echinicola vietnamensis DSM 17526   1 1
No Yes Hydrogenobacter thermophilus TK-6   2 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   2 1
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   1 1
No Yes Campylobacter jejuni RM1221   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2544   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2538   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2426   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2425   1 1
No Yes Campylobacter jejuni subsp. jejuni PT14   1 1
No Yes Campylobacter jejuni subsp. jejuni S3   1 1
No Yes Campylobacter jejuni subsp. jejuni M1   1 1
No Yes Campylobacter jejuni subsp. jejuni IA3902   1 1
No Yes Campylobacter jejuni subsp. jejuni 81116   1 1
No Yes Campylobacter jejuni subsp. jejuni 81-176   1 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   1 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   1 1
No Yes Campylobacter coli 76339   1 1
No Yes Campylobacter coli 15-537360   1 1
No Yes Campylobacter coli CVM N29710   1 1
No Yes Helicobacter cetorum MIT 99-5656   1 1
No Yes Helicobacter pylori BM012S   1 1
No Yes Helicobacter pylori BM012A   1 1
No Yes Helicobacter pylori SouthAfrica20   1 1
No Yes Helicobacter pylori UM298   1 1
No Yes Helicobacter pylori UM066   1 1
No Yes Helicobacter pylori UM037   1 1
No Yes Helicobacter pylori UM299   1 1
No Yes Helicobacter pylori UM032   1 1
No Yes Helicobacter pylori OK310   1 1
No Yes Helicobacter pylori OK113   1 1
No Yes Helicobacter pylori Rif2   1 1
No Yes Helicobacter pylori Rif1   1 1
No Yes Helicobacter pylori HUP-B14   1 1
No Yes Helicobacter pylori PeCan18   1 1
No Yes Helicobacter pylori Shi169   1 1
No Yes Helicobacter pylori Shi112   1 1
No Yes Helicobacter pylori Shi417   1 1
No Yes Helicobacter pylori XZ274   1 1
No Yes Helicobacter pylori Aklavik86   1 1
No Yes Helicobacter pylori Aklavik117   1 1
No Yes Helicobacter pylori SNT49   1 1
No Yes Helicobacter pylori Puno135   1 1
No Yes Helicobacter pylori Puno120   1 1
No Yes Helicobacter pylori ELS37   1 1
No Yes Helicobacter pylori Gambia94/24   1 1
No Yes Helicobacter pylori SouthAfrica7   1 1
No Yes Helicobacter pylori India7   1 1
No Yes Helicobacter pylori Lithuania75   1 1
No Yes Helicobacter pylori 2017   1 1
No Yes Helicobacter pylori 2018   1 1
No Yes Helicobacter pylori 908   1 1
No Yes Helicobacter pylori F57   1 1
No Yes Helicobacter pylori F30   1 1
No Yes Helicobacter pylori F16   1 1
No Yes Helicobacter pylori Sat464   1 1
No Yes Helicobacter pylori Cuz20   1 1
No Yes Helicobacter pylori PeCan4   1 1
No Yes Helicobacter pylori SJM180   1 1
No Yes Helicobacter pylori B8   1 1
No Yes Helicobacter pylori 52   1 1
No Yes Helicobacter pylori v225d   1 1
No Yes Helicobacter pylori 83   1 1
No Yes Helicobacter pylori 35A   1 1
No Yes Helicobacter pylori P12   1 1
No Yes Helicobacter pylori G27   1 1
No Yes Helicobacter pylori Shi470   1 1
No Yes Helicobacter pylori HPAG1   1 1
No Yes Helicobacter pylori 51   1 1
No Yes Helicobacter pylori F32   1 1
No Yes Helicobacter pylori J99   1 1
No Yes Helicobacter pylori 26695   1 1
No Yes Helicobacter pylori 26695   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   1 1
No Yes Lawsonia intracellularis N343   1 1
No Yes Desulfovibrio vulgaris RCH1   1 1
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   1 1
No Yes Desulfovibrio vulgaris str. Hildenborough   1 1
No Yes Desulfovibrio desulfuricans ND132   1 1
No Yes Geobacter sp. M18   2 1
No Yes Geobacter sulfurreducens PCA   2 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Anaeromyxobacter sp. K   2 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   2 1
No Yes Myxococcus stipitatus DSM 14675   2 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis M01-240355   1 1
No Yes Neisseria meningitidis 8013   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Pandoraea pnomenusa 3kgm   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Sulfuricella denitrificans skB26   2 1
No Yes Zymomonas mobilis subsp. mobilis CP4   1 1
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Leisingera methylohalidivorans DSM 14336   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   2 2
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   1 1
No Yes Mannheimia haemolytica USMARC_2286   1 1
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   1 1
No Yes Mannheimia haemolytica D171   1 1
No Yes Mannheimia haemolytica D153   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Idiomarina loihiensis GSL 199   1 1
No Yes Coxiella burnetii CbuK_Q154   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Thermococcus sp. AM4   2 1
No Yes Thermococcus sp. CL1   2 1
No Yes Thermococcus litoralis DSM 5473   2 2
No Yes Pyrococcus sp. NA2   2 1
No Yes Pyrococcus furiosus DSM 3638   2 1
No Yes 1_050719N (meta-genome)   14 9
No Yes 2_050719S (meta-genome)   7 4
No Yes 3_050719R (meta-genome)   6 3
No Yes 4_050719Q (meta-genome)   10 8
No Yes 5_050719P (meta-genome)   8 8
No Yes Bath Hot Springs, filamentous community (meta-genome)   8 4
No Yes Bath Hot Springs, planktonic community (meta-genome)   21 13
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   3 3
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   3 3
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   4 3
No Yes Fungus garden combined (combined) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   4 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   2 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   6 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   14 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   13 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   8 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   9 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   3 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   3 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   6 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   3 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   4 3
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   6 5
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   4 3
No Yes NCBI 2017_08 genome   43543 34701
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   4 4
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   4 3
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   3 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   10 9
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   7 6
No Yes STRING v9.0.5 (STRING)   336 279
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 2
No Yes Termite Protist Endosymbiont Community (meta-genome)   6 5
No Yes Uniprot 2018_03 genome   7684 6520
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   12 9
No Yes Global Ocean Sampling Expedition (GOS)   108 87
No Yes NCBI plasmid sequences (Plasmids)   5 5
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   7 4
No Yes Protein Data Bank (all PDB sequenc)   19 13
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   87 87
No Yes TargetDB (Targets)   13 10

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