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RNase A-like superfamily domain assignments
in
Monodelphis domestica 69_5

Assignment details

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Monodelphis domestica 69_5 has 12 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMODP00000006404   2.75e-24   27-152   Ribonuclease A-like  
ENSMODP00000008285   3.4e-43   27-152   Ribonuclease A-like  
ENSMODP00000008564   7.07e-38   30-146   Ribonuclease A-like  
ENSMODP00000008618   7.72e-49   27-150   Ribonuclease A-like  
ENSMODP00000008633   1.57e-41   27-142   Ribonuclease A-like  
ENSMODP00000008643   1.57e-40   41-157   Ribonuclease A-like  
ENSMODP00000034354   4.84e-38   24-145   Ribonuclease A-like  
ENSMODP00000034355   5.11e-35   28-157   Ribonuclease A-like  
ENSMODP00000034357   2.09e-19   35-144   Ribonuclease A-like  
ENSMODP00000034363   1.7e-30   29-157   Ribonuclease A-like  
ENSMODP00000034364   8.9e-32   52-172   Ribonuclease A-like  
ENSMODP00000041292   5.11e-25   57-175   Ribonuclease A-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   8660 8660
No Yes Homo sapiens 76_38 Human 47 47
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 14 14
No Yes Gorilla gorilla 76_3.1 Western gorilla 13 13
No Yes Pongo abelii 76_2 Sumatran orangutan 13 13
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 12 12
No Yes Papio anubis 76 Olive baboon 14 14
No Yes Macaca mulatta 76_1 Rhesus monkey 18 18
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 18 18
No Yes Otolemur garnettii 76_3 Small-eared galago 14 14
No Yes Microcebus murinus 76_1 Gray mouse lemur 9 9
No Yes Rattus norvegicus 76_5.0 Norway rat 18 18
No Yes Mus musculus 76_38 House mouse 27 27
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 6 6
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 11 11
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 12 12
No Yes Cavia porcellus 76_3 Domestic guinea pig 15 15
No Yes Oryctolagus cuniculus 76_2 Rabbit 13 13
No Yes Ochotona princeps 76 American pika 10 10
No Yes Tupaia belangeri 76 Northern tree shrew 7 7
No Yes Sus scrofa 76_10.2 Pig 12 12
No Yes Bos taurus 76_3.1 Cattle 14 14
No Yes Ovis aries 76_3.1 Sheep 16 16
No Yes Vicugna pacos 76_1 Alpaca 10 10
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 5 5
No Yes Mustela putorius furo 76_1.0 Domestic ferret 9 9
No Yes Ailuropoda melanoleuca 76_1 Giant panda 12 12
No Yes Canis familiaris 76_3.1 Dog 9 9
No Yes Felis catus 76_6.2 Domestic cat 11 11
No Yes Equus caballus 76_2 Horse 9 9
No Yes Myotis lucifugus 76_2.0 Little brown bat 32 32
No Yes Pteropus vampyrus 76_1 Large flying fox 8 8
No Yes Sorex araneus 76_1 European shrew 7 7
No Yes Erinaceus europaeus 76 Western European hedgehog 6 6
No Yes Procavia capensis 76_1 Cape rock hyrax 6 6
No Yes Loxodonta africana 76_3 African savanna elephant 12 12
No Yes Echinops telfairi 76 Small Madagascar hedgehog 6 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 9 9
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 8 8
No Yes Macropus eugenii 76_1.0 Tammar wallaby 3 3
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 15 15
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 12 12
No Yes Ornithorhynchus anatinus 76_5 Platypus 4 4
No Yes Meleagris gallopavo 76_2 Turkey 2 2
No Yes Gallus gallus 76_4 Chicken 3 3
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 9 9
No Yes Xenopus laevis African clawed frog 3 3
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 1 1
No Yes Lepisosteus oculatus 76 Spotted gar 7 7
No Yes Gadus morhua 76_1 Atlantic cod 2 2
No Yes Oryzias latipes 76_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 3 3
No Yes Poecilia formosa 76 Amazon molly 7 7
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 21 21
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 8 8
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 3 3
No Yes Homo sapiens 75_37 (old version GRC) Human 45 45
No Yes Homo sapiens (NCBI version) Human 26 26
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 20 20
No Yes Homo sapiens 69_37 Human 17 17
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 14 14
No Yes Gorilla gorilla 69_3.1 Western gorilla 12 12
No Yes Pongo abelii 69_2 Sumatran orangutan 13 13
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 13 13
No Yes Macaca mulatta 69_1 Rhesus monkey 13 13
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 9 9
No Yes Otolemur garnettii 69_3 Small-eared galago 14 14
No Yes Microcebus murinus 69_1 Gray mouse lemur 9 9
No Yes Rattus norvegicus 69_3.4 Norway rat 18 18
No Yes Mus musculus 69_38 House mouse 20 20
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 6 6
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 11 11
No Yes Cavia porcellus 69_3 Domestic guinea pig 13 13
No Yes Oryctolagus cuniculus 69_2 Rabbit 13 13
No Yes Ochotona princeps 69 American pika 10 10
No Yes Tupaia belangeri 69 Northern tree shrew 7 7
No Yes Sus scrofa 69_10.2 Pig 11 11
No Yes Bos taurus 69_3.1 Cattle 14 14
No Yes Vicugna pacos 69_1 Alpaca 10 10
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 5 5
No Yes Mustela putorius furo 69_1.0 Domestic ferret 9 9
No Yes Ailuropoda melanoleuca 69_1 Giant panda 12 12
No Yes Canis familiaris 69_3.1 Dog 9 9
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 9 9
No Yes Myotis lucifugus 69_2.0 Little brown bat 32 32
No Yes Pteropus vampyrus 69_1 Large flying fox 8 8
No Yes Sorex araneus 69_1 European shrew 7 7
No Yes Erinaceus europaeus 69 Western European hedgehog 6 6
No Yes Procavia capensis 69_1 Cape rock hyrax 6 6
No Yes Loxodonta africana 69_3 African savanna elephant 12 12
No Yes Echinops telfairi 69 Small Madagascar hedgehog 6 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 5 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 8 8
No Yes Macropus eugenii 69_1.0 Tammar wallaby 3 3
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 15 15
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 12 12
No Yes Ornithorhynchus anatinus 69_5 Platypus 4 4
No Yes Meleagris gallopavo 69_2 Turkey 2 2
No Yes Gallus gallus 69_2 Chicken 3 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 9 9
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1 1
No Yes Gadus morhua 69_1 Atlantic cod 2 2
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 3 3
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 21 21
No Yes Danio rerio 69_9 Zebrafish 4 4
No Yes NCBI 2017_08 genome   2769 2760
No Yes STRING v9.0.5 (STRING)   188 188
No Yes Uniprot 2018_03 genome   1667 1645
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   61 61
No Yes Protein Data Bank (all PDB sequenc)   625 621
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1715 1714
No Yes TargetDB (Targets)   6 6

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