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Chromo domain-like superfamily domain assignments
in
Aquilegia coerulea v195

Assignment details

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Aquilegia coerulea v195 has 60 significant domains in 41 proteins.

     

Sequence ID   Evalue   Region   Family  
Aquca_003_00438.1|PACid:22049758   9.89e-19   66-172   Chromo domain  
  0.0000000000000292   176-242   Chromo domain  
Aquca_003_00438.2|PACid:22049759   9.89e-19   66-172   Chromo domain  
  0.0000000000000292   176-242   Chromo domain  
Aquca_003_00438.3|PACid:22049760   9.89e-19   66-172   Chromo domain  
  0.0000000000000292   176-242   Chromo domain  
Aquca_003_00438.4|PACid:22049761   0.0000000000000292   85-150   Chromo domain  
  0.000000000000687   6-80   Chromo domain  
Aquca_003_00438.5|PACid:22049762   8.65e-19   66-172   Chromo domain  
  0.0000000000000258   176-242   Chromo domain  
Aquca_003_00438.6|PACid:22049763   8.51e-19   66-172   Chromo domain  
  0.0000000000000241   176-242   Chromo domain  
Aquca_003_00438.7|PACid:22049764   7.42e-19   66-172   Chromo domain  
  0.0000000000000223   177-242   Chromo domain  
Aquca_003_00438.8|PACid:22049765   7e-19   66-172   Chromo domain  
  0.0000000000000206   177-242   Chromo domain  
Aquca_003_00438.9|PACid:22049766   5.08e-19   66-172   Chromo domain  
  0.0000000000000155   177-242   Chromo domain  
Aquca_007_00316.1|PACid:22048861   1.46e-23   59-174   Chromo barrel domain  
Aquca_007_00778.1|PACid:22048237   1.12e-27   59-156,186-211   Chromo barrel domain  
Aquca_013_00362.1|PACid:22058479   0.00000242   372-426   Chromo domain  
Aquca_014_00504.1|PACid:22027471   0.000000000000778   2-82   Chromo barrel domain  
Aquca_014_00659.1|PACid:22028494   0.0000000000000255   487-565   Chromo domain  
  0.000000000000805   387-470   Chromo domain  
Aquca_014_00659.2|PACid:22028495   0.0000000000000196   482-560   Chromo domain  
  0.000000000000805   387-470   Chromo domain  
Aquca_014_00659.3|PACid:22028496   0.0000000000000196   481-559   Chromo domain  
  0.000000000000805   386-469   Chromo domain  
Aquca_028_00142.1|PACid:22038645   0.00000000000044   501-572   Chromo domain  
Aquca_028_00142.2|PACid:22038646   0.000000000000367   501-572   Chromo domain  
Aquca_028_00142.3|PACid:22038647   0.00000000000033   501-572   Chromo domain  
Aquca_030_00131.1|PACid:22035771   0.00000000403   169-267   Chromo domain  
  0.00000802   273-335   Chromo domain  
Aquca_030_00131.2|PACid:22035772   0.00000000403   169-267   Chromo domain  
  0.00000802   273-335   Chromo domain  
Aquca_030_00131.3|PACid:22035773   0.000000000806   150-248   Chromo domain  
  0.00000802   254-316   Chromo domain  
Aquca_030_00322.1|PACid:22035687   0.000000000043   617-667   Chromo domain  
  0.0000000000605   673-732   Chromo domain  
Aquca_030_00322.2|PACid:22035688   0.000000000043   617-667   Chromo domain  
  0.0000000000605   673-732   Chromo domain  
Aquca_031_00044.1|PACid:22050827   2.75e-17   72-135   Chromo domain  
Aquca_031_00044.2|PACid:22050828   7.44e-18   72-135   Chromo domain  
Aquca_043_00094.1|PACid:22045130   0.000000000412   277-325   Chromo domain  
  0.00000000119   326-375   Chromo domain  
  0.0000000108   79-130   Chromo domain  
Aquca_051_00001.1|PACid:22046136   0.00000137   261-309   Chromo domain  
Aquca_058_00108.1|PACid:22050929   0.0000000000132   370-438   Chromo domain  
Aquca_058_00108.2|PACid:22050930   0.0000000000132   369-437   Chromo domain  
Aquca_078_00023.1|PACid:22054487   0.0000000000134   380-447   Chromo domain  
Aquca_078_00023.2|PACid:22054488   0.0000000000134   379-446   Chromo domain  
Aquca_078_00023.3|PACid:22054489   0.0000000000132   380-447   Chromo domain  
Aquca_078_00023.4|PACid:22054490   0.0000000000132   379-446   Chromo domain  
Aquca_093_00033.1|PACid:22058141   0.0000000055   201-265   Chromo domain  
Aquca_105_00006.1|PACid:22030877   0.000000000000119   336-399   Chromo domain  
Aquca_105_00006.2|PACid:22030878   0.000000000000112   336-399   Chromo domain  
Aquca_110_00005.1|PACid:22033434   0.00000000000136   532-605   Chromo domain  
Aquca_112_00022.1|PACid:22060288   0.000000000653   234-298   Chromo domain  
Aquca_112_00022.2|PACid:22060289   0.000000000586   192-256   Chromo domain  
Aquca_133_00030.1|PACid:22042711   0.0000000000202   448-518   Chromo domain  
 
Weak hits:
Aquca_001_00754.1|PACid:22042954   0.00465   30-76   Chromo domain  
Aquca_003_00288.1|PACid:22050006   0.00645   44-73   Chromo domain  
Aquca_003_00455.1|PACid:22050396   0.00604   7-49   Chromo barrel domain  
Aquca_009_00075.1|PACid:22034805   0.0002   148-189   Chromo domain  
Aquca_009_00075.2|PACid:22034804   0.0002   148-189   Chromo domain  
Aquca_009_00075.3|PACid:22034806   0.0002   148-189   Chromo domain  
Aquca_009_00075.4|PACid:22034807   0.000177   148-189   Chromo domain  
Aquca_014_00295.3|PACid:22027937   0.0989   7-73   Chromo barrel domain  
Aquca_014_00295.4|PACid:22027938   0.0796   7-73   Chromo barrel domain  
Aquca_014_00439.1|PACid:22028137   0.0136   10-55   Chromo barrel domain  
Aquca_020_00171.1|PACid:22025720   0.00595   3-43   Chromo barrel domain  
Aquca_020_00303.1|PACid:22025372   0.000489   129-167   Chromo domain  
Aquca_020_00303.2|PACid:22025373   0.000302   129-168   Chromo domain  
Aquca_045_00125.1|PACid:22027131   0.00119   52-85   Chromo domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   112799 112799
No Yes Homo sapiens 76_38 Human 150 113
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 49 35
No Yes Gorilla gorilla 76_3.1 Western gorilla 71 49
No Yes Pongo abelii 76_2 Sumatran orangutan 41 28
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 41 28
No Yes Papio anubis 76 Olive baboon 47 33
No Yes Macaca mulatta 76_1 Rhesus monkey 72 49
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 99 70
No Yes Otolemur garnettii 76_3 Small-eared galago 52 36
No Yes Microcebus murinus 76_1 Gray mouse lemur 33 23
No Yes Rattus norvegicus 76_5.0 Norway rat 49 33
No Yes Mus musculus 76_38 House mouse 100 70
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 34 23
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 42 30
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 53 38
No Yes Cavia porcellus 76_3 Domestic guinea pig 41 29
No Yes Oryctolagus cuniculus 76_2 Rabbit 50 32
No Yes Ochotona princeps 76 American pika 25 19
No Yes Tupaia belangeri 76 Northern tree shrew 31 22
No Yes Sus scrofa 76_10.2 Pig 49 33
No Yes Bos taurus 76_3.1 Cattle 43 31
No Yes Ovis aries 76_3.1 Sheep 52 35
No Yes Vicugna pacos 76_1 Alpaca 20 15
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 35 25
No Yes Mustela putorius furo 76_1.0 Domestic ferret 44 29
No Yes Ailuropoda melanoleuca 76_1 Giant panda 45 32
No Yes Canis familiaris 76_3.1 Dog 62 40
No Yes Felis catus 76_6.2 Domestic cat 47 33
No Yes Equus caballus 76_2 Horse 47 31
No Yes Myotis lucifugus 76_2.0 Little brown bat 37 26
No Yes Pteropus vampyrus 76_1 Large flying fox 35 25
No Yes Sorex araneus 76_1 European shrew 27 18
No Yes Erinaceus europaeus 76 Western European hedgehog 26 19
No Yes Procavia capensis 76_1 Cape rock hyrax 32 22
No Yes Loxodonta africana 76_3 African savanna elephant 58 37
No Yes Echinops telfairi 76 Small Madagascar hedgehog 31 22
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 51 34
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 25 17
No Yes Macropus eugenii 76_1.0 Tammar wallaby 24 18
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 59 44
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 50 39
No Yes Ornithorhynchus anatinus 76_5 Platypus 27 19
No Yes Saccoglossus kowalevskii v3.0   106 75
No Yes Petromyzon marinus 76_7.0 Sea lamprey 18 12
No Yes Meleagris gallopavo 76_2 Turkey 29 20
No Yes Gallus gallus 76_4 Chicken 36 25
No Yes Anas platyrhynchos 76_1.0 Mallard 33 22
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 32 23
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 31 20
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 37 26
No Yes Anolis carolinensis 76_2.0 Green anole 56 45
No Yes Xenopus laevis African clawed frog 64 49
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 53 38
No Yes Latimeria chalumnae 76_1 Coelacanth 41 30
No Yes Lepisosteus oculatus 76 Spotted gar 51 34
No Yes Gadus morhua 76_1 Atlantic cod 45 33
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 64 43
No Yes Takifugu rubripes 76_4 Torafugu 139 91
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 60 44
No Yes Oryzias latipes 76_1 Japanese medaka 68 52
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 50 35
No Yes Poecilia formosa 76 Amazon molly 50 35
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 66 45
No Yes Astyanax mexicanus 76 Mexican tetra 48 35
No Yes Danio rerio 76_9 Zebrafish 101 71
No Yes Oikopleura dioica   49 37
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 42 32
No Yes Ciona intestinalis 76 Vase tunicate 11 9
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 27 23
No Yes Adineta vaga   76 51
No Yes Octopus bimaculoides 280   40 27
No Yes Crassostrea gigas 22 Pacific oyster 18 14
No Yes Lottia gigantea Owl limpet 14 12
No Yes Helobdella robusta   15 11
No Yes Capitella sp. I   19 15
No Yes Danaus plexippus OGS1.0 Monarch butterfly 23 16
No Yes Heliconius melpomene Postman butterfly 21 15
No Yes Bombyx mori Domestic silkworm 18 13
No Yes Nasonia vitripennis Jewel wasp 54 49
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 32 22
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 24 19
No Yes Linepithema humile v1.1 Argentine ant 15 11
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 14 12
No Yes Solenopsis invicta v.2.2.3 Red fire ant 12 10
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 24 17
No Yes Atta cephalotes v1.1   18 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 20 15
No Yes Lucilia cuprina Australian sheep blowfly 12 10
No Yes Drosophila grimshawi 1.3   28 20
No Yes Drosophila willistoni 1.3   34 25
No Yes Drosophila pseudoobscura 2.13   32 24
No Yes Drosophila persimilis 1.3   28 23
No Yes Drosophila suzukii   33 23
No Yes Drosophila yakuba 1.3   34 25
No Yes Drosophila simulans 1.3   26 20
No Yes Drosophila sechellia 1.3   26 20
No Yes Drosophila melanogaster 76_5 Fruit fly 63 42
No Yes Drosophila erecta 1.3   31 23
No Yes Drosophila ananassae 1.3   31 23
No Yes Drosophila virilis 1.2   31 22
No Yes Drosophila mojavensis 1.3   28 20
No Yes Megaselia scalaris 22   6 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 23 16
No Yes Culex pipiens quinquefasciatus Southern house mosquito 29 20
No Yes Anopheles darlingi 22 American malaria mosquito 14 10
No Yes Anopheles gambiae 49_3j African malaria mosquito 18 13
No Yes Tribolium castaneum 3.0 Red flour beetle 33 26
No Yes Pediculus humanus corporis (Early assembly) Human body louse 17 14
No Yes Acyrthosiphon pisum Pea aphid 29 22
No Yes Rhodnius prolixus 22   17 13
No Yes Daphnia pulex Common water flea 46 42
No Yes Strigamia maritima 22   22 20
No Yes Sarcoptes scabiei   15 12
No Yes Tetranychus urticae Two-spotted spider mite 42 27
No Yes Ixodes scapularis (Preliminary) Black-legged tick 14 10
No Yes Pristionchus pacificus   45 42
No Yes Meloidogyne incognita Southern root-knot nematode 62 47
No Yes Meloidogyne hapla   41 36
No Yes Onchocerca volvulus 22   24 18
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 36 28
No Yes Caenorhabditis japonica   30 24
No Yes Caenorhabditis brenneri   80 67
No Yes Caenorhabditis remanei   82 74
No Yes Caenorhabditis elegans 76_235 Roundworm 40 28
No Yes Caenorhabditis briggsae 2   60 51
No Yes Trichinella spiralis 22   17 13
No Yes Hymenolepis microstoma   21 14
No Yes Echinococcus multilocularis   19 13
No Yes Echinococcus granulosus   18 12
No Yes Taenia solium Pork tapeworm 20 14
No Yes Schistosoma mansoni   22 15
No Yes Mnemiopsis leidyi Sea walnut 19 16
No Yes Thelohanellus kitauei   8 6
No Yes Acropora digitifera v1.0   23 20
No Yes Nematostella vectensis 1.0 Starlet sea anemone 25 21
No Yes Hydra vulgaris   32 29
No Yes Amphimedon queenslandica   23 20
No Yes Trichoplax adhaerens   15 11
No Yes Proterospongia sp. ATCC 50818   19 17
No Yes Monosiga brevicollis   11 9
No Yes Sphaeroforma arctica JP610   21 19
No Yes Capsaspora owczarzaki ATCC 30864   20 15
No Yes Conidiobolus coronatus NRRL28638 v1.0   17 13
No Yes Mortierella verticillata NRRL 6337   29 25
No Yes Phycomyces blakesleeanus   25 19
No Yes Rhizopus oryzae RA 99-880   255 247
No Yes Mucor circinelloides   25 19
No Yes Rhizomucor miehei CAU432   27 21
No Yes Malassezia globosa CBS 7966   12 8
No Yes Sporisorium reilianum 22   14 10
No Yes Ustilago maydis   6 5
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   17 15
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   16 15
No Yes Melampsora laricis-populina   10 8
No Yes Rhodotorula graminis WP1 v1.0   8 6
No Yes Sporobolomyces roseus IAM 13481   8 6
No Yes Microbotryum violaceum 22   11 10
No Yes Wallemia sebi v1.0   6 5
No Yes Sphaerobolus stellatus v1.0   52 49
No Yes Piloderma croceum F 1598 v1.0   24 22
No Yes Serpula lacrymans var. lacrymans S7.9   17 16
No Yes Coniophora puteana   14 13
No Yes Hydnomerulius pinastri v2.0   15 13
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   19 17
No Yes Pisolithus microcarpus 441 v1.0   25 24
No Yes Pisolithus tinctorius Marx 270 v1.0   58 56
No Yes Scleroderma citrinum Foug A v1.0   94 92
No Yes Coprinopsis cinerea okayama7 130 v3   14 12
No Yes Pleurotus ostreatus Oyster mushroom 15 13
No Yes Amanita thiersii Skay4041 v1.0   26 24
No Yes Amanita muscaria Koide v1.0 Fly agaric 30 29
No Yes Galerina marginata v1.0   21 20
No Yes Hebeloma cylindrosporum h7 v2.0   16 14
No Yes Laccaria bicolor S238N-H82   24 22
No Yes Agaricus bisporus var. bisporus   18 16
No Yes Schizophyllum commune   18 17
No Yes Stereum hirsutum FP-91666 SS1 v1.0   18 16
No Yes Heterobasidion annosum   18 16
No Yes Gloeophyllum trabeumv1.0   21 19
No Yes Punctularia strigosozonata v1.0   34 32
No Yes Sebacina vermifera MAFF 305830 v1.0   9 8
No Yes Fomitiporia mediterranea v1.0   16 14
No Yes Tulasnella calospora AL13/4D v1.0   18 16
No Yes Postia placenta   11 10
No Yes Wolfiporia cocos MD-104 SS10 v1.0   18 15
No Yes Fomitopsis pinicolav1.0   27 25
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   20 18
No Yes Phanerochaete chrysosporium RP-78 2.1   81 80
No Yes Dichomitus squalens   15 13
No Yes Trametes versicolor v1.0   18 16
No Yes Tremella mesenterica Witches' butter 31 29
No Yes Daldinia eschscholzii EC12 v1.0   14 11
No Yes Apiospora montagnei NRRL 25634 v1.0   15 12
No Yes Magnaporthe poae ATCC 64411 22   14 12
No Yes Magnaporthe grisea 70-15   17 14
No Yes Podospora anserina   14 13
No Yes Sporotrichum thermophile ATCC 42464   12 10
No Yes Thielavia terrestris NRRL 8126   11 9
No Yes Chaetomium globosum CBS 148.51   32 31
No Yes Neurospora tetrasperma   13 11
No Yes Neurospora discreta FGSC 8579   13 11
No Yes Neurospora crassa OR74A   15 13
No Yes Cryphonectria parasitica Chestnut blight fungus 13 11
No Yes Verticillium albo-atrum VaMs.102   10 9
No Yes Verticillium dahliae VdLs.17   13 12
No Yes Acremonium alcalophilumv 1.0   13 10
No Yes Glomerella graminicola 22   18 15
No Yes Fusarium graminearum   13 11
No Yes Nectria haematococca mpVI   20 15
No Yes Fusarium oxysporum f. sp. lycopersici 4286   40 27
No Yes Fusarium verticillioides 7600   18 14
No Yes Trichoderma asperellum CBS 433.97 v1.0   14 11
No Yes Trichoderma atroviride   12 9
No Yes Trichoderma citrinoviride v1.0   13 10
No Yes Trichoderma reesei 1.2   12 9
No Yes Trichoderma virens Gv29-8   11 9
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   13 10
No Yes Trichoderma harzianum CBS 226.95 v1.0   13 11
No Yes Amorphotheca resinae v1.0 Creosote fungus 13 11
No Yes Botrytis cinerea B05.10   24 21
No Yes Sclerotinia sclerotiorum   30 27
No Yes Blumeria graminis 22   11 10
No Yes Didymella exigua CBS 183.55 v1.0   10 8
No Yes Leptosphaeria maculans 22   11 9
No Yes Setosphaeria turcica v1.0   16 13
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   10 8
No Yes Cochliobolus victoriae FI3 v1.0   12 10
No Yes Cochliobolus carbonum 26-R-13 v1.0   10 8
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 9 7
No Yes Alternaria brassicicola   11 9
No Yes Cochliobolus lunatus m118 v2.0   12 10
No Yes Pyrenophora teres f. teres 22   19 17
No Yes Pyrenophora tritici-repentis   12 10
No Yes Stagonospora nodorum   11 10
No Yes Mycosphaerella graminicola IPO323   11 9
No Yes Zasmidium cellare ATCC 36951 v1.0   14 11
No Yes Dothistroma septosporum   11 8
No Yes Septoria musiva v1.0   11 8
No Yes Mycosphaerella fijiensis CIRAD86   7 6
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   11 9
No Yes Paracoccidioides brasiliensis Pb18   9 8
No Yes Coccidioides posadasii RMSCC 3488   12 9
No Yes Coccidioides immitis RS   15 13
No Yes Ajellomyces dermatitidis SLH14081   12 10
No Yes Histoplasma capsulatum class NAmI strain WU24   16 11
No Yes Microsporum canis CBS 113480   9 7
No Yes Trichophyton equinum CBS 127.97   8 7
No Yes Trichophyton verrucosum HKI 0517   11 9
No Yes Arthroderma benhamiae CBS 112371   10 8
No Yes Trichophyton tonsurans CBS 112818   9 7
No Yes Trichophyton rubrum CBS 118892   9 7
No Yes Uncinocarpus reesii 1704   9 8
No Yes Aspergillus zonatus v1.0   10 7
No Yes Penicillium chrysogenum Wisconsin 54-1255   12 10
No Yes Penicillium chrysogenum v1.0   11 9
No Yes Aspergillus acidus v1.0   11 8
No Yes Aspergillus fumigatus Af293   12 10
No Yes Aspergillus brasiliensis v1.0   12 9
No Yes Aspergillus nidulans FGSC A4   9 7
No Yes Aspergillus sydowii v1.0   10 8
No Yes Aspergillus versicolor v1.0   10 8
No Yes Aspergillus glaucus   11 8
No Yes Aspergillus carbonarius ITEM 5010   11 8
No Yes Neosartorya fischeri NRRL 181   11 9
No Yes Aspergillus terreus NIH2624   9 7
No Yes Aspergillus tubingensis v1.0   11 8
No Yes Aspergillus wentii v1.0   10 8
No Yes Aspergillus oryzae RIB40   8 7
No Yes Aspergillus niger 22   9 7
No Yes Aspergillus niger ATCC 1015   6 4
No Yes Aspergillus flavus NRRL3357   9 7
No Yes Aspergillus clavatus NRRL 1   10 8
No Yes Penicillium marneffei ATCC 18224   20 17
No Yes Tuber melanosporum Mel28 22   9 7
No Yes Tuber melanosporum Vittad Perigord truffle 236 234
No Yes Hansenula polymorpha v2.0   4 3
No Yes Dekkera bruxellensis CBS 2499 v2.0   5 4
No Yes Pichia membranifaciensv1.0   5 4
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   5 4
No Yes Candida dubliniensis CD36   4 3
No Yes Candida tropicalis MYA-3404   3 2
No Yes Candida parapsilosis   4 3
No Yes Candida albicans SC5314   5 4
No Yes Lodderomyces elongisporus NRRL YB-4239   4 3
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   5 4
No Yes Pichia stipitis CBS 6054   3 2
No Yes Candida guilliermondii ATCC 6260   4 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 2
No Yes Debaromyces hansenii   4 3
No Yes Wickerhamomyces anomalus   4 3
No Yes Pichia pastoris GS115   4 3
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   6 4
No Yes Yarrowia lipolytica CLIB122   4 3
No Yes Candida lusitaniae ATCC 42720   4 3
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   4 3
No Yes Vanderwaltozyma polyspora DSM 70294   4 3
No Yes Candida glabrata CBS138   4 3
No Yes Kluyveromyces thermotolerans CBS 6340   4 3
No Yes Lachancea kluyveri   4 3
No Yes Kluyveromyces waltii   4 3
No Yes Ashbya gossypii ATCC 10895   5 4
No Yes Zygosaccharomyces rouxii   4 3
No Yes Saccharomyces mikatae MIT   4 3
No Yes Saccharomyces paradoxus MIT   4 3
No Yes Saccharomyces cerevisiae 76 Baker's yeast 4 3
No Yes Saccharomyces bayanus MIT   5 4
No Yes Kluyveromyces lactis   5 4
No Yes Schizosaccharomyces cryophilus OY26 22   13 9
No Yes Schizosaccharomyces octosporus yFS286   13 9
No Yes Schizosaccharomyces japonicus yFS275   16 12
No Yes Schizosaccharomyces pombe Fission yeast 13 9
No Yes Catenaria anguillulae PL171 v1.0   22 19
No Yes Allomyces macrogynus ATCC 38327   31 21
No Yes Spizellomyces punctatus DAOM BR117   41 35
No Yes Dictyostelium discoideum   23 18
No Yes Dictyostelium purpureum   29 27
No Yes Entamoeba dispar 1.2   12 10
No Yes Entamoeba invadens 1.2   10 7
No Yes Entamoeba histolytica 1   11 9
No Yes Selaginella moellendorffii   31 22
No Yes Pinus taeda Loblolly pine 13 9
No Yes Picea abies Norway spruce 3 2
No Yes Eucalyptus grandis v201 Rose gum 36 22
No Yes Theobroma cacao B97-61/B2 v1 Cacao 224 217
No Yes Gossypium raimondii v221   107 66
No Yes Citrus clementina v165   18 12
No Yes Citrus sinensis v154 Sweet orange 49 31
No Yes Thellungiella halophila v173   25 16
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 27 19
No Yes Capsella rubella v183   22 16
No Yes Arabidopsis lyrata Lyrate rockcress 21 15
No Yes Arabidopsis thaliana 10 Thale cress 23 17
No Yes Carica papaya Papaya 22 17
No Yes Medicago truncatula Barrel medic 54 35
No Yes Phaseolus vulgaris v186 French bean 29 21
No Yes Glycine max v109 Soybean 53 42
No Yes Cucumis sativus v122 Cucumber 51 39
No Yes Fragaria vesca Wild strawberry 27 22
No Yes Malus domestica v196 Apple 25 23
No Yes Prunus persica v139 Peach 34 28
No Yes Linum usitatissimum v200 Flax 34 24
No Yes Manihot esculenta v147 Cassava 33 24
No Yes Populus trichocarpa v156 Black cottonwood 31 22
No Yes Vitis vinifera Wine grape 15 12
No Yes Mimulus guttatus v140 Spotted monkey flower 23 16
No Yes Solanum lycopersicum v.2.3 Tomato 31 23
No Yes Solanum tuberosum Potato 22 19
No Yes Actinidia chinensis Hongyang   33 24
No Yes Aquilegia coerulea v195   60 41
No Yes Triticum urartu 22   17 12
No Yes Triticum aestivum 22 Bread wheat 63 50
No Yes Aegilops tauschii 22   19 13
No Yes Brachypodium distachyon Stiff brome 34 24
No Yes Oryza barthii 22 African wild rice 47 32
No Yes Oryza meridionalis 22   43 27
No Yes Oryza glumaepatula 22   34 25
No Yes Oryza glaberrima African rice 21 14
No Yes Oryza punctata 22   32 20
No Yes Oryza nivara 22   47 30
No Yes Oryza brachyantha 22 Malo sina 19 13
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 819 812
No Yes Oryza sativa v193 Rice 822 815
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 44 35
No Yes Panicum virgatum v202 Switchgrass 41 27
No Yes Setaria italica v164 Foxtail millet 22 14
No Yes Zea mays subsp. mays Maize 29 24
No Yes Zea mays v181 Maize 27 21
No Yes Sorghum bicolor Sorghum 24 21
No Yes Musa balbisiana Balbis banana 153 146
No Yes Musa acuminata 22 Wild Malaysian banana 19 14
No Yes Amborella trichopoda 22   20 13
No Yes Physcomitrella patens   46 35
No Yes Coccomyxa subellipsoidea sp. C-169 v2   10 8
No Yes Asterochloris sp. Cgr/DA1pho v1.0   8 7
No Yes Chlorella variabilis sp. NC64A   16 15
No Yes Chlorella vulgaris   12 9
No Yes Volvox carteri f. nagariensis   13 8
No Yes Volvox carteri v199   14 9
No Yes Chlamydomonas reinhardtii 4.0   13 9
No Yes Ostreococcus sp. RCC809   6 5
No Yes Ostreococcus lucimarinus CCE9901   10 8
No Yes Ostreococcus tauri   5 4
No Yes Bathycoccus prasinos   11 9
No Yes Micromonas sp. RCC299   8 7
No Yes Micromonas pusilla CCMP1545 v3.0   13 11
No Yes Cyanidioschyzon merolae strain 10D 22   4 3
No Yes Cyanidioschyzon merolae   4 3
No Yes Porphyridium purpureum 02_2012   11 9
No Yes Thecamonas trahens ATCC 50062   8 8
No Yes Bigelowiella natans CCMP2755 22   50 44
No Yes Giardia lamblia 2.3   3 3
No Yes Cyanophora paradoxa   20 18
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   2 2
No Yes Leishmania infantum JPCM5 2.4   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 2
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma cruzi strain CL Brener   2 2
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Ectocarpus siliculosus   21 17
No Yes Aureococcus anophagefferens   6 6
No Yes Albugo laibachii 22   40 35
No Yes Pythium iwayamai DAOM BR242034 22   29 25
No Yes Pythium arrhenomanes ATCC 12531 22   38 33
No Yes Pythium ultimum v1.7-2   58 54
No Yes Pythium aphanidermatum DAOM BR444 22   24 19
No Yes Pythium irregulare DAOM BR486 22   24 19
No Yes Pythium vexans DAOM BR484 22   28 23
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 101 94
No Yes Phytophthora sojae 1.1   165 159
No Yes Phytophthora infestans T30-4   84 79
No Yes Phytophthora capsici   82 76
No Yes Hyaloperonospora arabidopsidis 22   34 32
No Yes Phaeodactylum tricornutumCCAP 1055/1   8 8
No Yes Fragilariopsis cylindrus   7 7
No Yes Thalassiosira pseudonana CCMP1335   17 12
No Yes Perkinsus marinus ATCC 50983   25 24
No Yes Paramecium tetraurelia   51 48
No Yes Tetrahymena thermophila SB210 1   24 19
No Yes Ichthyophthirius multifiliis strain G5   7 6
No Yes Cryptosporidium hominis   7 5
No Yes Cryptosporidium muris   7 5
No Yes Cryptosporidium parvum Iowa II   7 5
No Yes Neospora caninum   6 5
No Yes Toxoplasma gondii VEG   5 4
No Yes Toxoplasma gondii ME49   6 5
No Yes Toxoplasma gondii GT1   6 5
No Yes Babesia bovis T2Bo   10 6
No Yes Theileria parva   5 3
No Yes Theileria annulata   5 3
No Yes Plasmodium falciparum 3D7   5 4
No Yes Plasmodium vivax SaI-1 7.0   4 3
No Yes Plasmodium knowlesi strain H   5 4
No Yes Plasmodium yoelii ssp. yoelii 1   5 4
No Yes Plasmodium chabaudi   5 4
No Yes Plasmodium berghei ANKA   5 4
No Yes Symbiodinium minutum clade B1 v1.2   16 13
No Yes Naegleria gruberi   12 10
No Yes Trichomonas vaginalis   96 73
No Yes Guillardia theta CCMP2712 v1.0   32 27
No Yes Emiliania huxleyi CCMP1516   114 109
No Yes Acaryochloris marina MBIC11017   3 2
No Yes Microcoleus sp. PCC 7113   2 1
No Yes Calothrix sp. PCC 7507   2 1
No Yes Anabaena variabilis ATCC 29413   2 1
No Yes Nostoc sp. PCC 7107   2 1
No Yes Nostoc punctiforme PCC 73102   4 2
No Yes Nostoc sp. PCC 7120   2 1
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Planctomyces limnophilus DSM 3776   2 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Sorangium cellulosum 'So ce 56'   3 2
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Magnetospirillum magneticum AMB-1   3 2
No Yes Azospirillum lipoferum 4B   1 1
No Yes Metallosphaera cuprina Ar-4   1 1
No Yes Metallosphaera sedula DSM 5348   1 1
No Yes Acidianus hospitalis W1   3 3
No Yes Sulfolobus tokodaii str. 7   2 2
No Yes Sulfolobus islandicus Y.N.15.51   2 2
No Yes Sulfolobus solfataricus P2   3 3
No Yes Sulfolobus acidocaldarius DSM 639   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 124 103
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 44 30
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 18 13
No Yes Ascaris suum Victoria/Ghent Pig roundworm 33 27
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 36 24
No Yes Cryptococcus neoformans var. grubii H99   11 10
No Yes Cryptococcus neoformans B-3501A   16 14
No Yes Cryptococcus neoformans JEC21   13 12
No Yes Paracoccidioides brasiliensis Pb01   12 11
No Yes Paracoccidioides brasiliensis Pb03   10 9
No Yes Coccidioides posadasii str. Silveira   11 9
No Yes Coccidioides immitis RMSCC 3703   11 9
No Yes Coccidioides immitis RMSCC 2394   11 9
No Yes Coccidioides immitis H538.4   10 8
No Yes Ajellomyces dermatitidis ER-3   11 9
No Yes Histoplasma capsulatum H143   9 7
No Yes Histoplasma capsulatum H88   12 10
No Yes Histoplasma capsulatum G186AR   12 10
No Yes Aspergillus fumigatus A1163   11 9
No Yes Candida albicans WO-1   5 4
No Yes Saccharomyces cerevisiae UC5   4 3
No Yes Saccharomyces cerevisiae PW5   4 3
No Yes Saccharomyces cerevisiae FL100   2 1
No Yes Saccharomyces cerevisiae CLIB324   2 2
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   4 3
No Yes Saccharomyces cerevisiae FostersB   4 3
No Yes Saccharomyces cerevisiae FostersO   4 3
No Yes Saccharomyces cerevisiae VL3   3 2
No Yes Saccharomyces cerevisiae Vin13   4 3
No Yes Saccharomyces cerevisiae LalvinQA23   3 2
No Yes Saccharomyces cerevisiae AWRI796   3 2
No Yes Saccharomyces cerevisiae Sigma1278b   4 3
No Yes Saccharomyces cerevisiae W303   4 3
No Yes Saccharomyces cerevisiae JAY291   4 3
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae T73   3 2
No Yes Saccharomyces cerevisiae CLIB215   2 2
No Yes Saccharomyces cerevisiae YJM789   4 3
No Yes Saccharomyces cerevisiae YJM789   4 3
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   3 3
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 4 3
No Yes Schizosaccharomyces pombe 972h-   13 9
No Yes Batrachochytrium dendrobatidis JEL423   16 13
No Yes Batrachochytrium dendrobatidis JAM81   16 10
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 188 182
No Yes Hordeum vulgare 22 Domesticated barley 48 35
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 127 119
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Neospora caninum Nc-Liverpool 6.2   6 5
No Yes Plasmodium falciparum HB3   5 4
No Yes Plasmodium falciparum Dd2   3 2
No Yes Oscillatoria acuminata PCC 6304   2 1
No Yes Stanieria cyanosphaera PCC 7437   2 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   4 2
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   2 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Sorangium cellulosum So0157-2   3 2
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Sulfolobus islandicus LAL14/1   2 2
No Yes Sulfolobus islandicus REY15A   2 2
No Yes Sulfolobus islandicus HVE10/4   2 2
No Yes Sulfolobus islandicus Y.G.57.14   2 2
No Yes Sulfolobus islandicus L.S.2.15   2 2
No Yes Sulfolobus islandicus M.16.27   2 2
No Yes Sulfolobus islandicus M.14.25   2 2
No Yes Sulfolobus islandicus M.16.4   2 2
No Yes Sulfolobus islandicus L.D.8.5   2 2
No Yes Sulfolobus solfataricus 98/2   2 2
No Yes Sulfolobus acidocaldarius SUSAZ   2 2
No Yes Sulfolobus acidocaldarius Ron12/I   2 2
No Yes Sulfolobus acidocaldarius N8   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 159 121
No Yes Homo sapiens (NCBI version) Human 77 57
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 47 32
No Yes Heliconius numata (Incomplete)   10 7
No Yes Loa loa v3.3 (Request) Eye worm 26 21
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 25 21
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 22 17
No Yes Moniliophthora perniciosa FA553 (Genome survey)   43 42
No Yes Encephalitozoon intestinalis (endoparasite)   5 3
No Yes Encephalitozoon cuniculi (endoparasite)   5 3
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   16 13
No Yes Malus x domestica (Duplicate) Apple 25 23
No Yes Ricinus communis (Early assembly) Castor bean 17 13
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   43 32
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 31 23
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 31 23
No Yes Phoenix dactylifera (Early draft) Date palm 18 15
No Yes Homo sapiens 69_37 Human 46 34
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 44 32
No Yes Gorilla gorilla 69_3.1 Western gorilla 42 29
No Yes Pongo abelii 69_2 Sumatran orangutan 41 28
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 38 26
No Yes Macaca mulatta 69_1 Rhesus monkey 44 31
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 53 36
No Yes Otolemur garnettii 69_3 Small-eared galago 51 35
No Yes Microcebus murinus 69_1 Gray mouse lemur 33 23
No Yes Rattus norvegicus 69_3.4 Norway rat 49 33
No Yes Mus musculus 69_38 House mouse 45 31
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 34 23
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 38 28
No Yes Cavia porcellus 69_3 Domestic guinea pig 40 28
No Yes Oryctolagus cuniculus 69_2 Rabbit 48 31
No Yes Ochotona princeps 69 American pika 25 19
No Yes Tupaia belangeri 69 Northern tree shrew 31 22
No Yes Sus scrofa 69_10.2 Pig 36 25
No Yes Bos taurus 69_3.1 Cattle 42 30
No Yes Vicugna pacos 69_1 Alpaca 20 15
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 35 25
No Yes Mustela putorius furo 69_1.0 Domestic ferret 44 29
No Yes Ailuropoda melanoleuca 69_1 Giant panda 41 29
No Yes Canis familiaris 69_3.1 Dog 45 30
No Yes Felis catus 69 Domestic cat 29 22
No Yes Equus caballus 69_2 Horse 39 27
No Yes Myotis lucifugus 69_2.0 Little brown bat 36 25
No Yes Pteropus vampyrus 69_1 Large flying fox 35 25
No Yes Sorex araneus 69_1 European shrew 27 18
No Yes Erinaceus europaeus 69 Western European hedgehog 26 19
No Yes Procavia capensis 69_1 Cape rock hyrax 32 22
No Yes Loxodonta africana 69_3 African savanna elephant 39 26
No Yes Echinops telfairi 69 Small Madagascar hedgehog 31 22
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 24 20
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 25 17
No Yes Macropus eugenii 69_1.0 Tammar wallaby 24 18
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 49 36
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 48 37
No Yes Ornithorhynchus anatinus 69_5 Platypus 24 17
No Yes Petromyzon marinus 69_7.0 Sea lamprey 16 11
No Yes Meleagris gallopavo 69_2 Turkey 27 18
No Yes Gallus gallus 69_2 Chicken 30 20
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 32 23
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 33 23
No Yes Anolis carolinensis 69_2.0 Green anole 38 27
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 41 30
No Yes Latimeria chalumnae 69_1 Coelacanth 37 26
No Yes Gadus morhua 69_1 Atlantic cod 45 33
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 48 34
No Yes Takifugu rubripes 69_4 Torafugu 48 34
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 49 35
No Yes Oryzias latipes 69_1 Japanese medaka 57 43
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 48 34
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 50 35
No Yes Danio rerio 69_9 Zebrafish 48 35
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 13 11
No Yes Ciona intestinalis 69 Vase tunicate 11 9
No Yes Drosophila melanogaster 69_5 Fruit fly 32 23
No Yes Caenorhabditis elegans 69_215 Roundworm 28 20
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 4 3
No Yes Arabidopsis thaliana 10 Thale cress 20 14
No Yes 2_050719S (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   3 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   114 114
No Yes Crater Hills (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   7 7
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   4 3
No Yes Endophytic microbiome from Rice (meta-genome)   118 118
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   3 3
No Yes NCBI 2017_08 genome   38108 26465
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   367 286
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   5 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   10 10
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   9 9
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   10 10
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   4 4
No Yes STRING v9.0.5 (STRING)   3916 3248
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   41254 32692
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   150 144
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   35 33
No Yes Protein Data Bank (all PDB sequenc)   321 296
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   651 651
No Yes TargetDB (Targets)   107 86

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