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Cystatin/monellin superfamily domain assignments
in
Vibrio fischeri ES114

Assignment details

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Vibrio fischeri ES114 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|59711591|ref|YP_204367.1|   6.8e-16   43-115   Cystatins  

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Select to display   Genome       Domains   Proteins
No Yes ALL   95689 95689
No Yes Homo sapiens 76_38 Human 63 47
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 28 22
No Yes Gorilla gorilla 76_3.1 Western gorilla 34 25
No Yes Pongo abelii 76_2 Sumatran orangutan 35 29
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 28 21
No Yes Papio anubis 76 Olive baboon 34 25
No Yes Macaca mulatta 76_1 Rhesus monkey 40 29
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 65 48
No Yes Otolemur garnettii 76_3 Small-eared galago 26 20
No Yes Microcebus murinus 76_1 Gray mouse lemur 29 23
No Yes Rattus norvegicus 76_5.0 Norway rat 53 42
No Yes Mus musculus 76_38 House mouse 80 58
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 17 14
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 34 27
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 30 23
No Yes Cavia porcellus 76_3 Domestic guinea pig 28 23
No Yes Oryctolagus cuniculus 76_2 Rabbit 33 26
No Yes Ochotona princeps 76 American pika 18 14
No Yes Tupaia belangeri 76 Northern tree shrew 19 14
No Yes Sus scrofa 76_10.2 Pig 37 31
No Yes Bos taurus 76_3.1 Cattle 51 42
No Yes Ovis aries 76_3.1 Sheep 45 36
No Yes Vicugna pacos 76_1 Alpaca 15 9
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 24 18
No Yes Mustela putorius furo 76_1.0 Domestic ferret 27 20
No Yes Ailuropoda melanoleuca 76_1 Giant panda 30 22
No Yes Canis familiaris 76_3.1 Dog 25 21
No Yes Felis catus 76_6.2 Domestic cat 28 21
No Yes Equus caballus 76_2 Horse 34 26
No Yes Myotis lucifugus 76_2.0 Little brown bat 40 33
No Yes Pteropus vampyrus 76_1 Large flying fox 23 17
No Yes Sorex araneus 76_1 European shrew 21 13
No Yes Erinaceus europaeus 76 Western European hedgehog 19 14
No Yes Procavia capensis 76_1 Cape rock hyrax 18 13
No Yes Loxodonta africana 76_3 African savanna elephant 31 24
No Yes Echinops telfairi 76 Small Madagascar hedgehog 25 19
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 36 28
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 21 16
No Yes Macropus eugenii 76_1.0 Tammar wallaby 9 6
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 26 21
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 25 21
No Yes Ornithorhynchus anatinus 76_5 Platypus 30 24
No Yes Saccoglossus kowalevskii v3.0   2 2
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 14 13
No Yes Gallus gallus 76_4 Chicken 24 17
No Yes Anas platyrhynchos 76_1.0 Mallard 18 11
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 18 12
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 18 12
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 27 20
No Yes Anolis carolinensis 76_2.0 Green anole 22 16
No Yes Xenopus laevis African clawed frog 44 24
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 26 18
No Yes Latimeria chalumnae 76_1 Coelacanth 19 12
No Yes Lepisosteus oculatus 76 Spotted gar 24 19
No Yes Gadus morhua 76_1 Atlantic cod 20 16
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 15 12
No Yes Takifugu rubripes 76_4 Torafugu 25 18
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 22 16
No Yes Oryzias latipes 76_1 Japanese medaka 28 23
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 23 18
No Yes Poecilia formosa 76 Amazon molly 22 16
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 34 24
No Yes Astyanax mexicanus 76 Mexican tetra 22 16
No Yes Danio rerio 76_9 Zebrafish 44 32
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 3 3
No Yes Adineta vaga   7 7
No Yes Octopus bimaculoides 280   2 2
No Yes Crassostrea gigas 22 Pacific oyster 22 20
No Yes Lottia gigantea Owl limpet 4 3
No Yes Helobdella robusta   10 10
No Yes Capitella sp. I   3 3
No Yes Danaus plexippus OGS1.0 Monarch butterfly 16 9
No Yes Heliconius melpomene Postman butterfly 13 4
No Yes Bombyx mori Domestic silkworm 8 2
No Yes Nasonia vitripennis Jewel wasp 2 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 2 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 3 1
No Yes Linepithema humile v1.1 Argentine ant 2 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   2 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 2 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   6 6
No Yes Drosophila willistoni 1.3   6 6
No Yes Drosophila pseudoobscura 2.13   4 4
No Yes Drosophila persimilis 1.3   4 4
No Yes Drosophila suzukii   7 6
No Yes Drosophila yakuba 1.3   4 4
No Yes Drosophila simulans 1.3   5 5
No Yes Drosophila sechellia 1.3   8 8
No Yes Drosophila melanogaster 76_5 Fruit fly 6 6
No Yes Drosophila erecta 1.3   5 5
No Yes Drosophila ananassae 1.3   5 5
No Yes Drosophila virilis 1.2   5 5
No Yes Drosophila mojavensis 1.3   9 9
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 4 4
No Yes Culex pipiens quinquefasciatus Southern house mosquito 6 3
No Yes Anopheles darlingi 22 American malaria mosquito 5 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 2
No Yes Tribolium castaneum 3.0 Red flour beetle 9 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 2
No Yes Acyrthosiphon pisum Pea aphid 2 1
No Yes Rhodnius prolixus 22   6 3
No Yes Daphnia pulex Common water flea 27 14
No Yes Strigamia maritima 22   3 3
No Yes Sarcoptes scabiei   2 2
No Yes Tetranychus urticae Two-spotted spider mite 26 26
No Yes Ixodes scapularis (Preliminary) Black-legged tick 13 13
No Yes Pristionchus pacificus   2 2
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   6 6
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 11 11
No Yes Caenorhabditis japonica   5 5
No Yes Caenorhabditis brenneri   11 11
No Yes Caenorhabditis remanei   6 6
No Yes Caenorhabditis elegans 76_235 Roundworm 5 5
No Yes Caenorhabditis briggsae 2   6 6
No Yes Trichinella spiralis 22   5 5
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   7 7
No Yes Mnemiopsis leidyi Sea walnut 4 4
No Yes Thelohanellus kitauei   5 5
No Yes Acropora digitifera v1.0   4 4
No Yes Nematostella vectensis 1.0 Starlet sea anemone 3 3
No Yes Hydra vulgaris   8 8
No Yes Amphimedon queenslandica   7 7
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   2 1
No Yes Capsaspora owczarzaki ATCC 30864   4 2
No Yes Mortierella verticillata NRRL 6337   2 2
No Yes Mucor circinelloides   1 1
No Yes Aspergillus zonatus v1.0   2 2
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Dictyostelium discoideum   3 3
No Yes Dictyostelium purpureum   3 3
No Yes Selaginella moellendorffii   4 4
No Yes Pinus taeda Loblolly pine 28 23
No Yes Picea abies Norway spruce 8 6
No Yes Eucalyptus grandis v201 Rose gum 24 21
No Yes Theobroma cacao B97-61/B2 v1 Cacao 9 7
No Yes Gossypium raimondii v221   21 16
No Yes Citrus clementina v165   23 19
No Yes Citrus sinensis v154 Sweet orange 15 14
No Yes Thellungiella halophila v173   18 17
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 46 42
No Yes Capsella rubella v183   16 14
No Yes Arabidopsis lyrata Lyrate rockcress 38 35
No Yes Arabidopsis thaliana 10 Thale cress 26 23
No Yes Carica papaya Papaya 10 9
No Yes Medicago truncatula Barrel medic 54 50
No Yes Phaseolus vulgaris v186 French bean 11 10
No Yes Glycine max v109 Soybean 24 21
No Yes Cucumis sativus v122 Cucumber 31 27
No Yes Fragaria vesca Wild strawberry 23 21
No Yes Malus domestica v196 Apple 43 39
No Yes Prunus persica v139 Peach 16 15
No Yes Linum usitatissimum v200 Flax 12 10
No Yes Manihot esculenta v147 Cassava 16 12
No Yes Populus trichocarpa v156 Black cottonwood 15 11
No Yes Vitis vinifera Wine grape 9 7
No Yes Mimulus guttatus v140 Spotted monkey flower 25 24
No Yes Solanum lycopersicum v.2.3 Tomato 13 9
No Yes Solanum tuberosum Potato 71 44
No Yes Actinidia chinensis Hongyang   11 10
No Yes Aquilegia coerulea v195   22 18
No Yes Triticum urartu 22   19 19
No Yes Triticum aestivum 22 Bread wheat 36 34
No Yes Aegilops tauschii 22   25 25
No Yes Brachypodium distachyon Stiff brome 29 29
No Yes Oryza barthii 22 African wild rice 21 17
No Yes Oryza meridionalis 22   18 16
No Yes Oryza glumaepatula 22   20 18
No Yes Oryza glaberrima African rice 5 5
No Yes Oryza punctata 22   20 18
No Yes Oryza nivara 22   22 18
No Yes Oryza brachyantha 22 Malo sina 16 15
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 23 22
No Yes Oryza sativa v193 Rice 23 22
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 14 13
No Yes Panicum virgatum v202 Switchgrass 41 39
No Yes Setaria italica v164 Foxtail millet 16 15
No Yes Zea mays subsp. mays Maize 26 24
No Yes Zea mays v181 Maize 28 26
No Yes Sorghum bicolor Sorghum 20 19
No Yes Musa balbisiana Balbis banana 16 13
No Yes Musa acuminata 22 Wild Malaysian banana 10 9
No Yes Amborella trichopoda 22   12 10
No Yes Physcomitrella patens   10 6
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   2 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   5 2
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Albugo laibachii 22   2 2
No Yes Pythium iwayamai DAOM BR242034 22   6 5
No Yes Pythium arrhenomanes ATCC 12531 22   5 4
No Yes Pythium ultimum v1.7-2   4 4
No Yes Pythium aphanidermatum DAOM BR444 22   6 6
No Yes Pythium irregulare DAOM BR486 22   6 6
No Yes Pythium vexans DAOM BR484 22   5 5
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 6 6
No Yes Phytophthora sojae 1.1   5 5
No Yes Phytophthora infestans T30-4   7 7
No Yes Phytophthora capsici   7 7
No Yes Hyaloperonospora arabidopsidis 22   2 2
No Yes Fragilariopsis cylindrus   3 3
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   24 21
No Yes Tetrahymena thermophila SB210 1   16 10
No Yes Ichthyophthirius multifiliis strain G5   2 2
No Yes Symbiodinium minutum clade B1 v1.2   4 4
No Yes Naegleria gruberi   6 5
No Yes Trichomonas vaginalis   4 4
No Yes Guillardia theta CCMP2712 v1.0   2 2
No Yes Emiliania huxleyi CCMP1516   4 4
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Clostridium difficile 630   1 1
No Yes Roseburia hominis A2-183   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   2 2
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Carnobacterium sp. 17-4   2 1
No Yes Carnobacterium sp. WN1359   2 1
No Yes Tetragenococcus halophilus NBRC 12172   2 1
No Yes Melissococcus plutonius DAT561   2 1
No Yes Enterococcus sp. 7L76   2 1
No Yes Enterococcus hirae ATCC 9790   2 1
No Yes Enterococcus faecium Aus0004   2 1
No Yes Enterococcus faecalis 62   2 1
No Yes Weissella koreensis KACC 15510   2 1
No Yes Oenococcus oeni PSU-1   2 1
No Yes Leuconostoc sp. C2   2 1
No Yes Leuconostoc kimchii IMSNU 11154   2 1
No Yes Leuconostoc citreum KM20   2 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   2 1
No Yes Leuconostoc gasicomitatum LMG 18811   2 1
No Yes Lactobacillus casei ATCC 334   2 1
No Yes Lactobacillus kefiranofaciens ZW3   2 1
No Yes Lactobacillus crispatus ST1   2 1
No Yes Lactobacillus rhamnosus Lc 705   2 1
No Yes Lactobacillus johnsonii FI9785   1 1
No Yes Lactobacillus sanfranciscensis TMW 1.1304   2 1
No Yes Lactobacillus salivarius CECT 5713   2 1
No Yes Lactobacillus ruminis ATCC 27782   2 1
No Yes Lactobacillus fermentum IFO 3956   2 1
No Yes Lactobacillus amylovorus GRL1118   2 1
No Yes Lactobacillus sakei subsp. sakei 23K   2 1
No Yes Lactobacillus reuteri DSM 20016   2 1
No Yes Lactobacillus gasseri ATCC 33323   1 1
No Yes Lactobacillus plantarum JDM1   2 1
No Yes Lactobacillus helveticus DPC 4571   2 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   1 1
No Yes Lactobacillus buchneri NRRL B-30929   2 1
No Yes Lactobacillus buchneri   2 1
No Yes Lactobacillus brevis ATCC 367   2 1
No Yes Lactobacillus acidophilus 30SC   2 1
No Yes Pediococcus claussenii ATCC BAA-344   2 1
No Yes Pediococcus pentosaceus ATCC 25745   2 1
No Yes Lactococcus garvieae ATCC 49156   2 1
No Yes Lactococcus lactis subsp. cremoris MG1363   2 1
No Yes Streptococcus intermedius JTH08   2 1
No Yes Streptococcus gallolyticus UCN34   2 1
No Yes Streptococcus pseudopneumoniae IS7493   2 1
No Yes Streptococcus pasteurianus ATCC 43144   2 1
No Yes Streptococcus equi subsp. equi 4047   2 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   2 1
No Yes Streptococcus macedonicus ACA-DC 198   2 1
No Yes Streptococcus mitis B6   2 1
No Yes Streptococcus parasanguinis ATCC 15912   2 1
No Yes Streptococcus pneumoniae P1031   2 1
No Yes Streptococcus thermophilus LMD-9   2 1
No Yes Streptococcus suis P1/7   2 1
No Yes Streptococcus sanguinis SK36   2 1
No Yes Streptococcus salivarius 57.I   2 1
No Yes Streptococcus oralis Uo5   2 1
No Yes Streptococcus gordonii str. Challis substr. CH1   2 1
No Yes Brevibacillus brevis NBRC 100599   2 1
No Yes Paenibacillus sp. JDR-2   2 1
No Yes Paenibacillus terrae HPL-003   2 1
No Yes Paenibacillus mucilaginosus 3016   2 1
No Yes Paenibacillus polymyxa M1   2 1
No Yes Bacillus selenitireducens MLS10   2 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   2 1
No Yes Listeria innocua Clip11262   2 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   2 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   2 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   2 1
No Yes Geobacillus thermoglucosidasius C56-YS93   2 1
No Yes Lysinibacillus sphaericus C3-41   2 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Anoxybacillus flavithermus WK1   2 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5   2 1
No Yes Geobacillus kaustophilus HTA426   2 1
No Yes Geobacillus sp. GHH01   2 1
No Yes Geobacillus sp. WCH70   2 1
No Yes Geobacillus thermodenitrificans NG80-2   2 1
No Yes Halobacillus halophilus DSM 2266   2 1
No Yes Bacillus sp. JS   2 1
No Yes Bacillus sp. 1NLA3E   2 1
No Yes Bacillus amyloliquefaciens FZB42   2 1
No Yes Bacillus atrophaeus 1942   2 1
No Yes Bacillus subtilis subsp. subtilis str. 168   2 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 1
No Yes Bacillus halodurans C-125   2 1
No Yes Bacillus weihenstephanensis KBAB4   2 1
No Yes Bacillus thuringiensis str. Al Hakam   2 1
No Yes Bacillus cereus 03BB102   2 1
No Yes Bacillus anthracis str. A0248   2 1
No Yes Bacillus pseudofirmus OF4   2 1
No Yes Bacillus clausii KSM-K16   2 1
No Yes Bacillus cellulosilyticus DSM 2522   2 1
No Yes Bacillus pumilus SAFR-032   2 1
No Yes Bacillus megaterium DSM 319   2 1
No Yes Bacillus coagulans 2-6   2 1
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Staphylococcus aureus subsp. aureus JH1   2 2
No Yes Staphylococcus aureus   2 2
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Polaribacter sp. MED152   3 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes Geobacter uraniireducens Rf4   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   3 3
No Yes Vibrio harveyi ATCC BAA-1116   3 3
No Yes Vibrio parahaemolyticus RIMD 2210633   3 3
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Shewanella denitrificans OS217   2 2
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 56 36
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 6 6
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 18 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 4 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 8 6
No Yes Hordeum vulgare 22 Domesticated barley 17 16
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 19 18
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Carnobacterium maltaromaticum LMA28   2 1
No Yes Melissococcus plutonius ATCC 35311   2 1
No Yes Enterococcus mundtii QU 25   3 2
No Yes Enterococcus casseliflavus EC20   2 1
No Yes Enterococcus faecium Aus0085   2 1
No Yes Enterococcus faecium NRRL B-2354   2 1
No Yes Enterococcus faecium DO   2 1
No Yes Enterococcus faecalis str. Symbioflor 1   2 1
No Yes Enterococcus faecalis D32   2 1
No Yes Enterococcus faecalis OG1RF   2 1
No Yes Enterococcus faecalis V583   2 1
No Yes Leuconostoc carnosum JB16   2 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   2 1
No Yes Leuconostoc gelidum JB7   2 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   2 1
No Yes Lactobacillus casei LOCK919   2 1
No Yes Lactobacillus casei W56   2 1
No Yes Lactobacillus casei LC2W   2 1
No Yes Lactobacillus casei BD-II   2 1
No Yes Lactobacillus casei BL23   2 1
No Yes Lactobacillus casei str. Zhang   2 1
No Yes Lactobacillus rhamnosus LOCK908   2 1
No Yes Lactobacillus rhamnosus LOCK900   2 1
No Yes Lactobacillus rhamnosus ATCC 8530   2 1
No Yes Lactobacillus rhamnosus GG   2 1
No Yes Lactobacillus rhamnosus GG   2 1
No Yes Lactobacillus johnsonii N6.2   1 1
No Yes Lactobacillus johnsonii DPC 6026   1 1
No Yes Lactobacillus johnsonii NCC 533   1 1
No Yes Lactobacillus salivarius UCC118   2 1
No Yes Lactobacillus fermentum F-6   2 1
No Yes Lactobacillus amylovorus GRL 1112   2 1
No Yes Lactobacillus reuteri TD1   2 1
No Yes Lactobacillus reuteri I5007   2 1
No Yes Lactobacillus reuteri JCM 1112   2 1
No Yes Lactobacillus reuteri SD2112   2 1
No Yes Lactobacillus plantarum 16   2 1
No Yes Lactobacillus plantarum ZJ316   2 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   2 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   2 1
No Yes Lactobacillus plantarum WCFS1   2 1
No Yes Lactobacillus helveticus R0052   2 1
No Yes Lactobacillus helveticus H10   2 1
No Yes Lactobacillus helveticus CNRZ32   2 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   1 1
No Yes Lactobacillus brevis KB290   2 1
No Yes Lactobacillus acidophilus La-14   2 1
No Yes Lactobacillus acidophilus NCFM   2 1
No Yes Pediococcus pentosaceus SL4   2 1
No Yes Lactococcus garvieae Lg2   2 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   2 1
No Yes Lactococcus lactis subsp. lactis IO-1   2 1
No Yes Lactococcus lactis subsp. lactis CV56   2 1
No Yes Lactococcus lactis subsp. lactis KF147   2 1
No Yes Lactococcus lactis subsp. lactis Il1403   2 1
No Yes Lactococcus lactis subsp. cremoris KW2   2 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   2 1
No Yes Lactococcus lactis subsp. cremoris A76   2 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   2 1
No Yes Lactococcus lactis subsp. cremoris SK11   2 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   2 1
No Yes Streptococcus constellatus subsp. pharyngis C818   2 1
No Yes Streptococcus constellatus subsp. pharyngis C232   2 1
No Yes Streptococcus intermedius B196   2 1
No Yes Streptococcus intermedius C270   2 1
No Yes Streptococcus anginosus C238   2 1
No Yes Streptococcus anginosus C1051   2 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   2 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   2 1
No Yes Streptococcus lutetiensis 033   2 1
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   2 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   2 1
No Yes Streptococcus equi subsp. zooepidemicus   2 1
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus parasanguinis FW213   2 1
No Yes Streptococcus pneumoniae A026   2 1
No Yes Streptococcus pneumoniae ST556   2 1
No Yes Streptococcus pneumoniae SPNA45   2 1
No Yes Streptococcus pneumoniae SPN994039   2 1
No Yes Streptococcus pneumoniae SPN994038   2 1
No Yes Streptococcus pneumoniae SPN034183   2 1
No Yes Streptococcus pneumoniae SPN034156   2 1
No Yes Streptococcus pneumoniae INV104   2 1
No Yes Streptococcus pneumoniae INV200   2 1
No Yes Streptococcus pneumoniae OXC141   2 1
No Yes Streptococcus pneumoniae gamPNI0373   2 1
No Yes Streptococcus pneumoniae AP200   2 1
No Yes Streptococcus pneumoniae ATCC 700669   2 1
No Yes Streptococcus pneumoniae TCH8431/19A   2 1
No Yes Streptococcus pneumoniae CGSP14   2 1
No Yes Streptococcus pneumoniae G54   2 1
No Yes Streptococcus pneumoniae JJA   2 1
No Yes Streptococcus pneumoniae 70585   2 1
No Yes Streptococcus pneumoniae Hungary19A-6   2 1
No Yes Streptococcus pneumoniae Taiwan19F-14   2 1
No Yes Streptococcus pneumoniae D39   2 1
No Yes Streptococcus pneumoniae 670-6B   2 1
No Yes Streptococcus pneumoniae R6   2 1
No Yes Streptococcus pneumoniae TIGR4   2 1
No Yes Streptococcus thermophilus MN-ZLW-002   2 1
No Yes Streptococcus thermophilus JIM 8232   2 1
No Yes Streptococcus thermophilus ND03   2 1
No Yes Streptococcus thermophilus CNRZ1066   2 1
No Yes Streptococcus thermophilus LMG 18311   2 1
No Yes Streptococcus suis T15   2 1
No Yes Streptococcus suis TL13   2 1
No Yes Streptococcus suis SC070731   2 1
No Yes Streptococcus suis S735   2 1
No Yes Streptococcus suis ST3   2 1
No Yes Streptococcus suis D9   2 1
No Yes Streptococcus suis SS12   2 1
No Yes Streptococcus suis D12   2 1
No Yes Streptococcus suis ST1   2 1
No Yes Streptococcus suis A7   2 1
No Yes Streptococcus suis JS14   2 1
No Yes Streptococcus suis BM407   2 1
No Yes Streptococcus suis SC84   2 1
No Yes Streptococcus suis GZ1   2 1
No Yes Streptococcus suis 98HAH33   2 1
No Yes Streptococcus suis 05ZYH33   2 1
No Yes Streptococcus salivarius CCHSS3   2 1
No Yes Streptococcus salivarius JIM8777   2 1
No Yes Thermobacillus composti KWC4   2 1
No Yes Paenibacillus sp. Y412MC10   2 1
No Yes Paenibacillus mucilaginosus KNP414   2 1
No Yes Paenibacillus mucilaginosus K02   2 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   2 1
No Yes Paenibacillus polymyxa CR1   2 1
No Yes Paenibacillus polymyxa SC2   2 1
No Yes Paenibacillus polymyxa E681   2 1
No Yes Listeria monocytogenes EGD sequence   2 1
No Yes Listeria monocytogenes N53-1   2 1
No Yes Listeria monocytogenes La111   2 1
No Yes Listeria monocytogenes serotype 4b str. LL195   2 1
No Yes Listeria monocytogenes 07PF0776   2 1
No Yes Listeria monocytogenes M7   2 1
No Yes Listeria monocytogenes J1-220   2 1
No Yes Listeria monocytogenes J1816   2 1
No Yes Listeria monocytogenes SLCC2376   2 1
No Yes Listeria monocytogenes SLCC5850   2 1
No Yes Listeria monocytogenes ATCC 19117   2 1
No Yes Listeria monocytogenes L312   2 1
No Yes Listeria monocytogenes SLCC2479   2 1
No Yes Listeria monocytogenes SLCC7179   2 1
No Yes Listeria monocytogenes SLCC2540   2 1
No Yes Listeria monocytogenes SLCC2378   2 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   2 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   2 1
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   2 1
No Yes Listeria monocytogenes 08-5578   2 1
No Yes Listeria monocytogenes 08-5923   2 1
No Yes Listeria monocytogenes L99   2 1
No Yes Listeria monocytogenes HCC23   2 1
No Yes Listeria monocytogenes 10403S   2 1
No Yes Listeria monocytogenes J0161   2 1
No Yes Listeria monocytogenes Finland 1998   2 1
No Yes Listeria monocytogenes FSL R2-561   2 1
No Yes Listeria monocytogenes serotype 4b str. F2365   2 1
No Yes Listeria monocytogenes EGD-e   2 1
No Yes Geobacillus sp. C56-T3   2 1
No Yes Geobacillus sp. Y4.1MC1   2 1
No Yes Geobacillus sp. Y412MC52   2 1
No Yes Geobacillus sp. Y412MC61   2 1
No Yes Amphibacillus xylanus NBRC 15112   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   2 1
No Yes Bacillus amyloliquefaciens LFB112   2 1
No Yes Bacillus amyloliquefaciens CC178   2 1
No Yes Bacillus amyloliquefaciens Y2   2 1
No Yes Bacillus amyloliquefaciens IT-45   2 1
No Yes Bacillus amyloliquefaciens XH7   2 1
No Yes Bacillus amyloliquefaciens LL3   2 1
No Yes Bacillus amyloliquefaciens TA208   2 1
No Yes Bacillus amyloliquefaciens DSM 7   2 1
No Yes Bacillus licheniformis 9945A   2 1
No Yes Bacillus subtilis PY79   2 1
No Yes Bacillus subtilis XF-1   2 1
No Yes Bacillus subtilis QB928   2 1
No Yes Bacillus subtilis BSn5   2 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   2 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   2 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   2 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   2 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   2 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   2 1
No Yes Bacillus subtilis subsp. natto BEST195   2 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 1
No Yes Bacillus infantis NRRL B-14911   2 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   2 1
No Yes Bacillus toyonensis BCT-7112   2 1
No Yes Bacillus thuringiensis HD-771   2 1
No Yes Bacillus thuringiensis HD-789   2 1
No Yes Bacillus thuringiensis MC28   2 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   2 1
No Yes Bacillus thuringiensis YBT-1518   2 1
No Yes Bacillus thuringiensis Bt407   2 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   2 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   2 1
No Yes Bacillus thuringiensis BMB171   2 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   2 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   2 1
No Yes Bacillus cereus FRI-35   2 1
No Yes Bacillus cereus biovar anthracis str. CI   2 1
No Yes Bacillus cereus AH820   2 1
No Yes Bacillus cereus AH187   2 1
No Yes Bacillus cereus B4264   2 1
No Yes Bacillus cereus G9842   2 1
No Yes Bacillus cereus Q1   2 1
No Yes Bacillus cereus F837/76   2 1
No Yes Bacillus cereus NC7401   2 1
No Yes Bacillus cereus E33L   2 1
No Yes Bacillus cereus ATCC 14579   2 1
No Yes Bacillus cereus ATCC 10987   2 1
No Yes Bacillus anthracis str. H9401   2 1
No Yes Bacillus anthracis str. CDC 684   2 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   2 1
No Yes Bacillus anthracis str. Sterne   2 1
No Yes Bacillus anthracis str. Ames   2 1
No Yes Bacillus megaterium WSH-002   2 1
No Yes Bacillus megaterium QM B1551   2 1
No Yes Bacillus coagulans 36D1   2 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   1 1
No Yes Staphylococcus pasteuri SP1   2 2
No Yes Staphylococcus warneri SG1   2 2
No Yes Staphylococcus epidermidis ATCC 12228   1 1
No Yes Staphylococcus aureus CA-347   2 2
No Yes Staphylococcus aureus Bmb9393   2 2
No Yes Staphylococcus aureus M1   2 2
No Yes Staphylococcus aureus 08BA02176   2 2
No Yes Staphylococcus aureus ST228/18412   2 2
No Yes Staphylococcus aureus ST228/18341   2 2
No Yes Staphylococcus aureus ST228/16125   2 2
No Yes Staphylococcus aureus ST228/16035   2 2
No Yes Staphylococcus aureus ST228/15532   2 2
No Yes Staphylococcus aureus ST228/10497   2 2
No Yes Staphylococcus aureus ST228/10388   2 2
No Yes Staphylococcus aureus 04-02981   2 2
No Yes Staphylococcus aureus RF122   2 2
No Yes Staphylococcus aureus subsp. aureus Z172   2 2
No Yes Staphylococcus aureus subsp. aureus 6850   2 2
No Yes Staphylococcus aureus subsp. aureus SA957   2 2
No Yes Staphylococcus aureus subsp. aureus CN1   2 2
No Yes Staphylococcus aureus subsp. aureus SA40   2 2
No Yes Staphylococcus aureus subsp. aureus 11819-97   2 2
No Yes Staphylococcus aureus subsp. aureus M013   2 2
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   2 2
No Yes Staphylococcus aureus subsp. aureus VC40   2 2
No Yes Staphylococcus aureus subsp. aureus T0131   2 2
No Yes Staphylococcus aureus subsp. aureus LGA251   2 2
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   2 2
No Yes Staphylococcus aureus subsp. aureus JKD6159   2 2
No Yes Staphylococcus aureus subsp. aureus ED133   2 2
No Yes Staphylococcus aureus subsp. aureus ED98   3 3
No Yes Staphylococcus aureus subsp. aureus TW20   2 2
No Yes Staphylococcus aureus subsp. aureus 55/2053   2 2
No Yes Staphylococcus aureus subsp. aureus TCH60   2 2
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   2 2
No Yes Staphylococcus aureus subsp. aureus 71193   2 2
No Yes Staphylococcus aureus subsp. aureus S0385   2 2
No Yes Staphylococcus aureus subsp. aureus str. Newman   2 2
No Yes Staphylococcus aureus subsp. aureus Mu3   2 2
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   2 2
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   2 2
No Yes Staphylococcus aureus subsp. aureus JH9   2 2
No Yes Staphylococcus aureus subsp. aureus MSSA476   2 2
No Yes Staphylococcus aureus subsp. aureus MRSA252   2 2
No Yes Staphylococcus aureus subsp. aureus MW2   2 2
No Yes Staphylococcus aureus subsp. aureus N315   2 2
No Yes Staphylococcus aureus subsp. aureus Mu50   2 2
No Yes Staphylococcus aureus subsp. aureus COL   2 2
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   2 2
No Yes Alistipes shahii WAL 8301   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon   1 1
No Yes Wolbachia endosymbiont strain TRS of Brugia malayi   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   3 3
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   3 3
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 65 49
No Yes Homo sapiens (NCBI version) Human 39 27
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 45 37
No Yes Loa loa v3.3 (Request) Eye worm 6 6
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 5 5
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 3 3
No Yes Picea sitchensis (Incomplete) Sitka spruce 7 4
No Yes Lotus japonicus (Early assembly)   11 9
No Yes Malus x domestica (Duplicate) Apple 43 39
No Yes Ricinus communis (Early assembly) Castor bean 7 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   28 24
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 13 9
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 13 9
No Yes Phoenix dactylifera (Early draft) Date palm 6 4
No Yes Wolbachia endosymbiont of Brugia malayi v1.0 (Broad Institute)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   3 3
No Yes Homo sapiens 69_37 Human 31 24
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 28 22
No Yes Gorilla gorilla 69_3.1 Western gorilla 26 21
No Yes Pongo abelii 69_2 Sumatran orangutan 34 28
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 28 21
No Yes Macaca mulatta 69_1 Rhesus monkey 29 23
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 39 33
No Yes Otolemur garnettii 69_3 Small-eared galago 26 20
No Yes Microcebus murinus 69_1 Gray mouse lemur 29 23
No Yes Rattus norvegicus 69_3.4 Norway rat 48 40
No Yes Mus musculus 69_38 House mouse 45 37
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 17 14
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 33 26
No Yes Cavia porcellus 69_3 Domestic guinea pig 27 22
No Yes Oryctolagus cuniculus 69_2 Rabbit 28 23
No Yes Ochotona princeps 69 American pika 18 14
No Yes Tupaia belangeri 69 Northern tree shrew 19 14
No Yes Sus scrofa 69_10.2 Pig 36 30
No Yes Bos taurus 69_3.1 Cattle 45 38
No Yes Vicugna pacos 69_1 Alpaca 15 9
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 24 18
No Yes Mustela putorius furo 69_1.0 Domestic ferret 27 20
No Yes Ailuropoda melanoleuca 69_1 Giant panda 26 20
No Yes Canis familiaris 69_3.1 Dog 24 20
No Yes Felis catus 69 Domestic cat 20 16
No Yes Equus caballus 69_2 Horse 31 25
No Yes Myotis lucifugus 69_2.0 Little brown bat 40 33
No Yes Pteropus vampyrus 69_1 Large flying fox 23 17
No Yes Sorex araneus 69_1 European shrew 21 13
No Yes Erinaceus europaeus 69 Western European hedgehog 19 14
No Yes Procavia capensis 69_1 Cape rock hyrax 18 13
No Yes Loxodonta africana 69_3 African savanna elephant 27 21
No Yes Echinops telfairi 69 Small Madagascar hedgehog 25 19
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 21 15
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 21 16
No Yes Macropus eugenii 69_1.0 Tammar wallaby 9 6
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 24 19
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 25 21
No Yes Ornithorhynchus anatinus 69_5 Platypus 24 19
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 11 10
No Yes Gallus gallus 69_2 Chicken 19 13
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 16 11
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 24 18
No Yes Anolis carolinensis 69_2.0 Green anole 20 14
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 21 15
No Yes Latimeria chalumnae 69_1 Coelacanth 17 11
No Yes Gadus morhua 69_1 Atlantic cod 14 11
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 15 12
No Yes Takifugu rubripes 69_4 Torafugu 20 14
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 18 13
No Yes Oryzias latipes 69_1 Japanese medaka 24 20
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 23 18
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 28 21
No Yes Danio rerio 69_9 Zebrafish 27 20
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 5 5
No Yes Caenorhabditis elegans 69_215 Roundworm 4 4
No Yes Arabidopsis thaliana 10 Thale cress 23 21
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 1
No Yes Dump top (Dump top) (meta-genome)   3 3
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   5 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   67995 47960
No Yes Protozoadb 2010_08 (Protozoadb)   10 10
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   3 3
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1237 974
No Yes Uniprot 2018_03 genome   16386 11389
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   2 2
No Yes NCBI viral sequences (Viral)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   30 28
No Yes Protein Data Bank (all PDB sequenc)   228 221
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   499 499
No Yes TargetDB (Targets)   71 48
No Yes UniProt viral sequences (Viral)   44 44

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