SUPERFAMILY 1.75 HMM library and genome assignments server

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Actin depolymerizing proteins superfamily domain assignments
in
Pseudoalteromonas haloplanktis TAC125


No domain assignments for these genomes.


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Select to display   Genome       Domains   Proteins
No Yes ALL   114150 114150
No Yes Homo sapiens 76_38 Human 233 110
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 61 21
No Yes Gorilla gorilla 76_3.1 Western gorilla 77 27
No Yes Pongo abelii 76_2 Sumatran orangutan 54 19
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 51 21
No Yes Papio anubis 76 Olive baboon 61 21
No Yes Macaca mulatta 76_1 Rhesus monkey 95 37
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 117 41
No Yes Otolemur garnettii 76_3 Small-eared galago 48 19
No Yes Microcebus murinus 76_1 Gray mouse lemur 46 17
No Yes Rattus norvegicus 76_5.0 Norway rat 56 22
No Yes Mus musculus 76_38 House mouse 132 56
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 44 17
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 55 22
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 46 18
No Yes Cavia porcellus 76_3 Domestic guinea pig 49 19
No Yes Oryctolagus cuniculus 76_2 Rabbit 42 20
No Yes Ochotona princeps 76 American pika 43 17
No Yes Tupaia belangeri 76 Northern tree shrew 37 15
No Yes Sus scrofa 76_10.2 Pig 48 23
No Yes Bos taurus 76_3.1 Cattle 63 23
No Yes Ovis aries 76_3.1 Sheep 48 18
No Yes Vicugna pacos 76_1 Alpaca 23 11
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 49 17
No Yes Mustela putorius furo 76_1.0 Domestic ferret 49 18
No Yes Ailuropoda melanoleuca 76_1 Giant panda 51 20
No Yes Canis familiaris 76_3.1 Dog 66 25
No Yes Felis catus 76_6.2 Domestic cat 56 23
No Yes Equus caballus 76_2 Horse 57 20
No Yes Myotis lucifugus 76_2.0 Little brown bat 41 17
No Yes Pteropus vampyrus 76_1 Large flying fox 45 18
No Yes Sorex araneus 76_1 European shrew 33 13
No Yes Erinaceus europaeus 76 Western European hedgehog 39 15
No Yes Procavia capensis 76_1 Cape rock hyrax 48 17
No Yes Loxodonta africana 76_3 African savanna elephant 71 23
No Yes Echinops telfairi 76 Small Madagascar hedgehog 40 18
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 63 25
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 22 8
No Yes Macropus eugenii 76_1.0 Tammar wallaby 48 16
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 45 18
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 49 20
No Yes Ornithorhynchus anatinus 76_5 Platypus 47 20
No Yes Saccoglossus kowalevskii v3.0   60 18
No Yes Petromyzon marinus 76_7.0 Sea lamprey 19 11
No Yes Meleagris gallopavo 76_2 Turkey 44 17
No Yes Gallus gallus 76_4 Chicken 47 17
No Yes Anas platyrhynchos 76_1.0 Mallard 37 14
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 41 15
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 50 16
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 45 19
No Yes Anolis carolinensis 76_2.0 Green anole 46 18
No Yes Xenopus laevis African clawed frog 122 56
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 79 28
No Yes Latimeria chalumnae 76_1 Coelacanth 75 26
No Yes Lepisosteus oculatus 76 Spotted gar 81 27
No Yes Gadus morhua 76_1 Atlantic cod 120 43
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 71 22
No Yes Takifugu rubripes 76_4 Torafugu 168 60
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 132 41
No Yes Oryzias latipes 76_1 Japanese medaka 72 26
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 72 23
No Yes Poecilia formosa 76 Amazon molly 88 28
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 95 31
No Yes Astyanax mexicanus 76 Mexican tetra 87 31
No Yes Danio rerio 76_9 Zebrafish 135 46
No Yes Oikopleura dioica   43 16
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 116 35
No Yes Ciona intestinalis 76 Vase tunicate 34 11
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 33 19
No Yes Adineta vaga   57 21
No Yes Octopus bimaculoides 280   37 13
No Yes Crassostrea gigas 22 Pacific oyster 52 22
No Yes Lottia gigantea Owl limpet 45 15
No Yes Helobdella robusta   33 15
No Yes Capitella sp. I   42 18
No Yes Danaus plexippus OGS1.0 Monarch butterfly 37 15
No Yes Heliconius melpomene Postman butterfly 34 12
No Yes Bombyx mori Domestic silkworm 31 16
No Yes Nasonia vitripennis Jewel wasp 17 6
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 43 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 21 6
No Yes Linepithema humile v1.1 Argentine ant 20 6
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 20 7
No Yes Solenopsis invicta v.2.2.3 Red fire ant 20 7
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 21 6
No Yes Atta cephalotes v1.1   19 6
No Yes Camponotus floridanus v3.3 Florida carpenter ant 20 6
No Yes Lucilia cuprina Australian sheep blowfly 28 10
No Yes Drosophila grimshawi 1.3   30 11
No Yes Drosophila willistoni 1.3   28 10
No Yes Drosophila pseudoobscura 2.13   40 12
No Yes Drosophila persimilis 1.3   27 10
No Yes Drosophila suzukii   30 10
No Yes Drosophila yakuba 1.3   28 10
No Yes Drosophila simulans 1.3   27 10
No Yes Drosophila sechellia 1.3   28 10
No Yes Drosophila melanogaster 76_5 Fruit fly 86 23
No Yes Drosophila erecta 1.3   28 10
No Yes Drosophila ananassae 1.3   28 10
No Yes Drosophila virilis 1.2   29 11
No Yes Drosophila mojavensis 1.3   30 11
No Yes Megaselia scalaris 22   18 7
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 33 11
No Yes Anopheles darlingi 22 American malaria mosquito 31 10
No Yes Anopheles gambiae 49_3j African malaria mosquito 34 11
No Yes Tribolium castaneum 3.0 Red flour beetle 29 9
No Yes Pediculus humanus corporis (Early assembly) Human body louse 25 8
No Yes Acyrthosiphon pisum Pea aphid 19 7
No Yes Rhodnius prolixus 22   19 8
No Yes Daphnia pulex Common water flea 33 12
No Yes Strigamia maritima 22   28 8
No Yes Sarcoptes scabiei   18 6
No Yes Tetranychus urticae Two-spotted spider mite 16 5
No Yes Ixodes scapularis (Preliminary) Black-legged tick 22 9
No Yes Pristionchus pacificus   28 14
No Yes Meloidogyne incognita Southern root-knot nematode 16 9
No Yes Meloidogyne hapla   7 6
No Yes Onchocerca volvulus 22   20 8
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 27 13
No Yes Caenorhabditis japonica   18 8
No Yes Caenorhabditis brenneri   19 8
No Yes Caenorhabditis remanei   22 8
No Yes Caenorhabditis elegans 76_235 Roundworm 27 13
No Yes Caenorhabditis briggsae 2   19 7
No Yes Trichinella spiralis 22   14 7
No Yes Hymenolepis microstoma   16 7
No Yes Echinococcus multilocularis   25 10
No Yes Echinococcus granulosus   25 10
No Yes Taenia solium Pork tapeworm 18 10
No Yes Schistosoma mansoni   30 13
No Yes Mnemiopsis leidyi Sea walnut 45 20
No Yes Thelohanellus kitauei   17 10
No Yes Acropora digitifera v1.0   29 17
No Yes Nematostella vectensis 1.0 Starlet sea anemone 62 30
No Yes Hydra vulgaris   41 15
No Yes Amphimedon queenslandica   39 19
No Yes Trichoplax adhaerens   37 10
No Yes Proterospongia sp. ATCC 50818   32 13
No Yes Monosiga brevicollis   29 11
No Yes Sphaeroforma arctica JP610   19 15
No Yes Capsaspora owczarzaki ATCC 30864   41 15
No Yes Conidiobolus coronatus NRRL28638 v1.0   11 6
No Yes Mortierella verticillata NRRL 6337   11 6
No Yes Phycomyces blakesleeanus   10 7
No Yes Rhizopus oryzae RA 99-880   12 10
No Yes Mucor circinelloides   10 7
No Yes Rhizomucor miehei CAU432   10 7
No Yes Malassezia globosa CBS 7966   8 8
No Yes Sporisorium reilianum 22   7 6
No Yes Ustilago maydis   6 5
No Yes Mixia osmundae IAM 14324 v1.0   7 6
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   7 5
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   7 5
No Yes Melampsora laricis-populina   6 4
No Yes Rhodotorula graminis WP1 v1.0   7 6
No Yes Sporobolomyces roseus IAM 13481   6 5
No Yes Microbotryum violaceum 22   8 7
No Yes Wallemia sebi v1.0   6 5
No Yes Sphaerobolus stellatus v1.0   12 10
No Yes Piloderma croceum F 1598 v1.0   10 7
No Yes Serpula lacrymans var. lacrymans S7.9   10 7
No Yes Coniophora puteana   6 5
No Yes Hydnomerulius pinastri v2.0   9 7
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   7 6
No Yes Pisolithus microcarpus 441 v1.0   6 5
No Yes Pisolithus tinctorius Marx 270 v1.0   8 7
No Yes Scleroderma citrinum Foug A v1.0   8 7
No Yes Coprinopsis cinerea okayama7 130 v3   11 8
No Yes Pleurotus ostreatus Oyster mushroom 8 7
No Yes Amanita thiersii Skay4041 v1.0   8 6
No Yes Amanita muscaria Koide v1.0 Fly agaric 9 8
No Yes Galerina marginata v1.0   12 9
No Yes Hebeloma cylindrosporum h7 v2.0   11 8
No Yes Laccaria bicolor S238N-H82   12 8
No Yes Agaricus bisporus var. bisporus   11 7
No Yes Schizophyllum commune   12 8
No Yes Stereum hirsutum FP-91666 SS1 v1.0   11 8
No Yes Heterobasidion annosum   9 6
No Yes Gloeophyllum trabeumv1.0   11 7
No Yes Punctularia strigosozonata v1.0   11 8
No Yes Sebacina vermifera MAFF 305830 v1.0   11 8
No Yes Fomitiporia mediterranea v1.0   7 6
No Yes Tulasnella calospora AL13/4D v1.0   12 9
No Yes Postia placenta   9 9
No Yes Wolfiporia cocos MD-104 SS10 v1.0   7 6
No Yes Fomitopsis pinicolav1.0   7 6
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   7 6
No Yes Phanerochaete chrysosporium RP-78 2.1   10 7
No Yes Dichomitus squalens   11 7
No Yes Trametes versicolor v1.0   10 6
No Yes Tremella mesenterica Witches' butter 6 5
No Yes Daldinia eschscholzii EC12 v1.0   12 8
No Yes Apiospora montagnei NRRL 25634 v1.0   13 8
No Yes Magnaporthe poae ATCC 64411 22   8 6
No Yes Magnaporthe grisea 70-15   12 8
No Yes Podospora anserina   10 7
No Yes Sporotrichum thermophile ATCC 42464   7 5
No Yes Thielavia terrestris NRRL 8126   13 8
No Yes Chaetomium globosum CBS 148.51   12 8
No Yes Neurospora tetrasperma   8 5
No Yes Neurospora discreta FGSC 8579   10 7
No Yes Neurospora crassa OR74A   11 8
No Yes Cryphonectria parasitica Chestnut blight fungus 10 7
No Yes Verticillium albo-atrum VaMs.102   8 6
No Yes Verticillium dahliae VdLs.17   13 8
No Yes Acremonium alcalophilumv 1.0   9 6
No Yes Glomerella graminicola 22   12 8
No Yes Fusarium graminearum   12 8
No Yes Nectria haematococca mpVI   13 9
No Yes Fusarium oxysporum f. sp. lycopersici 4286   14 10
No Yes Fusarium verticillioides 7600   14 10
No Yes Trichoderma asperellum CBS 433.97 v1.0   9 6
No Yes Trichoderma atroviride   10 7
No Yes Trichoderma citrinoviride v1.0   10 7
No Yes Trichoderma reesei 1.2   10 7
No Yes Trichoderma virens Gv29-8   10 7
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   8 6
No Yes Trichoderma harzianum CBS 226.95 v1.0   10 7
No Yes Amorphotheca resinae v1.0 Creosote fungus 12 8
No Yes Botrytis cinerea B05.10   10 7
No Yes Sclerotinia sclerotiorum   10 7
No Yes Blumeria graminis 22   8 6
No Yes Didymella exigua CBS 183.55 v1.0   9 7
No Yes Leptosphaeria maculans 22   11 8
No Yes Setosphaeria turcica v1.0   9 7
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   10 7
No Yes Cochliobolus victoriae FI3 v1.0   10 7
No Yes Cochliobolus carbonum 26-R-13 v1.0   10 7
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 10 7
No Yes Alternaria brassicicola   9 6
No Yes Cochliobolus lunatus m118 v2.0   11 8
No Yes Pyrenophora teres f. teres 22   10 7
No Yes Pyrenophora tritici-repentis   10 7
No Yes Stagonospora nodorum   11 8
No Yes Mycosphaerella graminicola IPO323   8 6
No Yes Zasmidium cellare ATCC 36951 v1.0   8 6
No Yes Dothistroma septosporum   8 6
No Yes Septoria musiva v1.0   8 6
No Yes Mycosphaerella fijiensis CIRAD86   4 4
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   9 7
No Yes Paracoccidioides brasiliensis Pb18   8 5
No Yes Coccidioides posadasii RMSCC 3488   9 6
No Yes Coccidioides immitis RS   9 6
No Yes Ajellomyces dermatitidis SLH14081   8 6
No Yes Histoplasma capsulatum class NAmI strain WU24   8 5
No Yes Microsporum canis CBS 113480   9 6
No Yes Trichophyton equinum CBS 127.97   8 5
No Yes Trichophyton verrucosum HKI 0517   8 5
No Yes Arthroderma benhamiae CBS 112371   7 4
No Yes Trichophyton tonsurans CBS 112818   8 6
No Yes Trichophyton rubrum CBS 118892   9 6
No Yes Uncinocarpus reesii 1704   8 5
No Yes Aspergillus zonatus v1.0   9 6
No Yes Penicillium chrysogenum Wisconsin 54-1255   11 9
No Yes Penicillium chrysogenum v1.0   14 10
No Yes Aspergillus acidus v1.0   12 8
No Yes Aspergillus fumigatus Af293   11 7
No Yes Aspergillus brasiliensis v1.0   11 7
No Yes Aspergillus nidulans FGSC A4   11 7
No Yes Aspergillus sydowii v1.0   12 7
No Yes Aspergillus versicolor v1.0   12 8
No Yes Aspergillus glaucus   12 7
No Yes Aspergillus carbonarius ITEM 5010   12 8
No Yes Neosartorya fischeri NRRL 181   10 7
No Yes Aspergillus terreus NIH2624   9 6
No Yes Aspergillus tubingensis v1.0   10 7
No Yes Aspergillus wentii v1.0   11 7
No Yes Aspergillus oryzae RIB40   9 6
No Yes Aspergillus niger 22   12 8
No Yes Aspergillus niger ATCC 1015   8 6
No Yes Aspergillus flavus NRRL3357   12 8
No Yes Aspergillus clavatus NRRL 1   9 6
No Yes Penicillium marneffei ATCC 18224   11 7
No Yes Tuber melanosporum Mel28 22   5 4
No Yes Tuber melanosporum Vittad Perigord truffle 6 5
No Yes Hansenula polymorpha v2.0   5 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   5 4
No Yes Pichia membranifaciensv1.0   5 4
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   5 4
No Yes Candida dubliniensis CD36   5 4
No Yes Candida tropicalis MYA-3404   3 2
No Yes Candida parapsilosis   5 4
No Yes Candida albicans SC5314   5 4
No Yes Lodderomyces elongisporus NRRL YB-4239   3 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   5 4
No Yes Pichia stipitis CBS 6054   5 4
No Yes Candida guilliermondii ATCC 6260   4 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   5 4
No Yes Debaromyces hansenii   5 4
No Yes Wickerhamomyces anomalus   6 5
No Yes Pichia pastoris GS115   5 4
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   4 4
No Yes Yarrowia lipolytica CLIB122   5 4
No Yes Candida lusitaniae ATCC 42720   3 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   5 4
No Yes Vanderwaltozyma polyspora DSM 70294   5 4
No Yes Candida glabrata CBS138   5 4
No Yes Kluyveromyces thermotolerans CBS 6340   5 4
No Yes Lachancea kluyveri   5 4
No Yes Kluyveromyces waltii   5 4
No Yes Ashbya gossypii ATCC 10895   5 4
No Yes Zygosaccharomyces rouxii   5 4
No Yes Saccharomyces mikatae MIT   5 4
No Yes Saccharomyces paradoxus MIT   4 3
No Yes Saccharomyces cerevisiae 76 Baker's yeast 5 4
No Yes Saccharomyces bayanus MIT   4 3
No Yes Kluyveromyces lactis   5 4
No Yes Schizosaccharomyces cryophilus OY26 22   5 4
No Yes Schizosaccharomyces octosporus yFS286   5 4
No Yes Schizosaccharomyces japonicus yFS275   5 4
No Yes Schizosaccharomyces pombe Fission yeast 5 4
No Yes Catenaria anguillulae PL171 v1.0   16 11
No Yes Allomyces macrogynus ATCC 38327   36 22
No Yes Spizellomyces punctatus DAOM BR117   27 11
No Yes Dictyostelium discoideum   64 28
No Yes Dictyostelium purpureum   54 23
No Yes Entamoeba dispar 1.2   41 18
No Yes Entamoeba invadens 1.2   50 27
No Yes Entamoeba histolytica 1   44 18
No Yes Selaginella moellendorffii   19 9
No Yes Pinus taeda Loblolly pine 64 38
No Yes Picea abies Norway spruce 28 15
No Yes Eucalyptus grandis v201 Rose gum 60 28
No Yes Theobroma cacao B97-61/B2 v1 Cacao 35 21
No Yes Gossypium raimondii v221   174 67
No Yes Citrus clementina v165   46 19
No Yes Citrus sinensis v154 Sweet orange 84 35
No Yes Thellungiella halophila v173   42 18
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 79 30
No Yes Capsella rubella v183   42 17
No Yes Arabidopsis lyrata Lyrate rockcress 48 23
No Yes Arabidopsis thaliana 10 Thale cress 65 25
No Yes Carica papaya Papaya 25 11
No Yes Medicago truncatula Barrel medic 60 22
No Yes Phaseolus vulgaris v186 French bean 61 21
No Yes Glycine max v109 Soybean 118 48
No Yes Cucumis sativus v122 Cucumber 121 32
No Yes Fragaria vesca Wild strawberry 28 14
No Yes Malus domestica v196 Apple 59 38
No Yes Prunus persica v139 Peach 40 16
No Yes Linum usitatissimum v200 Flax 53 26
No Yes Manihot esculenta v147 Cassava 93 36
No Yes Populus trichocarpa v156 Black cottonwood 65 26
No Yes Vitis vinifera Wine grape 30 14
No Yes Mimulus guttatus v140 Spotted monkey flower 38 18
No Yes Solanum lycopersicum v.2.3 Tomato 44 21
No Yes Solanum tuberosum Potato 37 23
No Yes Actinidia chinensis Hongyang   49 28
No Yes Aquilegia coerulea v195   79 26
No Yes Triticum urartu 22   40 16
No Yes Triticum aestivum 22 Bread wheat 134 57
No Yes Aegilops tauschii 22   31 12
No Yes Brachypodium distachyon Stiff brome 49 18
No Yes Oryza barthii 22 African wild rice 48 21
No Yes Oryza meridionalis 22   78 27
No Yes Oryza glumaepatula 22   70 25
No Yes Oryza glaberrima African rice 28 12
No Yes Oryza punctata 22   71 27
No Yes Oryza nivara 22   74 26
No Yes Oryza brachyantha 22 Malo sina 36 16
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 59 26
No Yes Oryza sativa v193 Rice 48 22
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 60 27
No Yes Panicum virgatum v202 Switchgrass 80 37
No Yes Setaria italica v164 Foxtail millet 41 19
No Yes Zea mays subsp. mays Maize 87 37
No Yes Zea mays v181 Maize 97 42
No Yes Sorghum bicolor Sorghum 43 17
No Yes Musa balbisiana Balbis banana 81 45
No Yes Musa acuminata 22 Wild Malaysian banana 87 48
No Yes Amborella trichopoda 22   23 9
No Yes Physcomitrella patens   20 5
No Yes Coccomyxa subellipsoidea sp. C-169 v2   3 2
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   2 2
No Yes Chlorella vulgaris   3 2
No Yes Volvox carteri f. nagariensis   7 2
No Yes Volvox carteri v199   8 3
No Yes Chlamydomonas reinhardtii 4.0   5 2
No Yes Ostreococcus sp. RCC809   2 2
No Yes Ostreococcus lucimarinus CCE9901   3 3
No Yes Ostreococcus tauri   3 2
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   6 2
No Yes Micromonas pusilla CCMP1545 v3.0   5 4
No Yes Cyanidioschyzon merolae strain 10D 22   2 2
No Yes Cyanidioschyzon merolae   2 2
No Yes Porphyridium purpureum 02_2012   6 4
No Yes Thecamonas trahens ATCC 50062   51 21
No Yes Bigelowiella natans CCMP2755 22   32 15
No Yes Cyanophora paradoxa   9 7
No Yes Leishmania mexicana 2.4   5 3
No Yes Leishmania major strain Friedlin   4 3
No Yes Leishmania infantum JPCM5 2.4   5 3
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   5 3
No Yes Trypanosoma vivax   5 3
No Yes Trypanosoma cruzi strain CL Brener   3 2
No Yes Trypanosoma congolense 2.4   2 2
No Yes Trypanosoma brucei gambiense v4.1   5 3
No Yes Trypanosoma brucei TREU927 v4.1   5 3
No Yes Ectocarpus siliculosus   19 9
No Yes Aureococcus anophagefferens   10 6
No Yes Albugo laibachii 22   14 8
No Yes Pythium iwayamai DAOM BR242034 22   12 6
No Yes Pythium arrhenomanes ATCC 12531 22   8 6
No Yes Pythium ultimum v1.7-2   14 7
No Yes Pythium aphanidermatum DAOM BR444 22   8 6
No Yes Pythium irregulare DAOM BR486 22   13 6
No Yes Pythium vexans DAOM BR484 22   13 6
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 14 7
No Yes Phytophthora sojae 1.1   12 6
No Yes Phytophthora infestans T30-4   13 6
No Yes Phytophthora capsici   11 5
No Yes Hyaloperonospora arabidopsidis 22   10 5
No Yes Phaeodactylum tricornutumCCAP 1055/1   8 4
No Yes Fragilariopsis cylindrus   8 5
No Yes Thalassiosira pseudonana CCMP1335   6 4
No Yes Perkinsus marinus ATCC 50983   5 5
No Yes Paramecium tetraurelia   9 7
No Yes Tetrahymena thermophila SB210 1   3 3
No Yes Ichthyophthirius multifiliis strain G5   3 2
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   2 2
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   4 3
No Yes Plasmodium vivax SaI-1 7.0   2 2
No Yes Plasmodium knowlesi strain H   3 3
No Yes Plasmodium yoelii ssp. yoelii 1   3 3
No Yes Plasmodium chabaudi   3 3
No Yes Plasmodium berghei ANKA   4 3
No Yes Symbiodinium minutum clade B1 v1.2   13 11
No Yes Naegleria gruberi   46 29
No Yes Trichomonas vaginalis   24 15
No Yes Guillardia theta CCMP2712 v1.0   20 12
No Yes Emiliania huxleyi CCMP1516   41 22
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 109 44
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 71 20
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 34 11
No Yes Ascaris suum Victoria/Ghent Pig roundworm 33 12
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 21 9
No Yes Cryptococcus neoformans var. grubii H99   6 5
No Yes Cryptococcus neoformans B-3501A   6 5
No Yes Cryptococcus neoformans JEC21   5 4
No Yes Paracoccidioides brasiliensis Pb01   8 5
No Yes Paracoccidioides brasiliensis Pb03   7 5
No Yes Coccidioides posadasii str. Silveira   9 6
No Yes Coccidioides immitis RMSCC 3703   10 7
No Yes Coccidioides immitis RMSCC 2394   9 6
No Yes Coccidioides immitis H538.4   9 6
No Yes Ajellomyces dermatitidis ER-3   8 6
No Yes Histoplasma capsulatum H143   9 6
No Yes Histoplasma capsulatum H88   9 6
No Yes Histoplasma capsulatum G186AR   9 6
No Yes Aspergillus fumigatus A1163   11 7
No Yes Candida albicans WO-1   5 4
No Yes Saccharomyces cerevisiae UC5   5 4
No Yes Saccharomyces cerevisiae PW5   5 4
No Yes Saccharomyces cerevisiae FL100   2 2
No Yes Saccharomyces cerevisiae CLIB382   3 2
No Yes Saccharomyces cerevisiae CLIB324   4 3
No Yes Saccharomyces cerevisiae CBS7960   5 4
No Yes Saccharomyces cerevisiae YJM269   5 4
No Yes Saccharomyces cerevisiae T7   5 4
No Yes Saccharomyces cerevisiae FostersB   3 3
No Yes Saccharomyces cerevisiae FostersO   5 4
No Yes Saccharomyces cerevisiae VL3   5 4
No Yes Saccharomyces cerevisiae Vin13   4 4
No Yes Saccharomyces cerevisiae LalvinQA23   5 4
No Yes Saccharomyces cerevisiae AWRI796   5 4
No Yes Saccharomyces cerevisiae Sigma1278b   5 4
No Yes Saccharomyces cerevisiae W303   5 4
No Yes Saccharomyces cerevisiae JAY291   5 4
No Yes Saccharomyces cerevisiae AWRI1631   5 4
No Yes Saccharomyces cerevisiae YPS163   3 2
No Yes Saccharomyces cerevisiae M22   3 3
No Yes Saccharomyces cerevisiae T73   5 4
No Yes Saccharomyces cerevisiae CLIB215   4 3
No Yes Saccharomyces cerevisiae Y10   2 2
No Yes Saccharomyces cerevisiae YJM789   5 4
No Yes Saccharomyces cerevisiae YJM789   5 4
No Yes Saccharomyces cerevisiae RM11-1a   4 3
No Yes Saccharomyces cerevisiae RM11-1a   4 3
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 5 4
No Yes Schizosaccharomyces pombe 972h-   5 4
No Yes Batrachochytrium dendrobatidis JEL423   20 9
No Yes Batrachochytrium dendrobatidis JAM81   17 9
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 31 15
No Yes Hordeum vulgare 22 Domesticated barley 109 38
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 38 17
No Yes Trypanosoma brucei Lister 427 v4.1   5 3
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   3 3
No Yes Plasmodium falciparum Dd2   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 254 115
No Yes Homo sapiens (NCBI version) Human 108 35
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 50 19
No Yes Heliconius numata (Incomplete)   22 17
No Yes Loa loa v3.3 (Request) Eye worm 20 10
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 20 12
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 17 9
No Yes Moniliophthora perniciosa FA553 (Genome survey)   2 2
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 4 4
No Yes Lotus japonicus (Early assembly)   32 22
No Yes Malus x domestica (Duplicate) Apple 59 38
No Yes Ricinus communis (Early assembly) Castor bean 15 10
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   50 34
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 43 20
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 44 21
No Yes Phoenix dactylifera (Early draft) Date palm 44 21
No Yes Homo sapiens 69_37 Human 50 19
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 49 18
No Yes Gorilla gorilla 69_3.1 Western gorilla 51 20
No Yes Pongo abelii 69_2 Sumatran orangutan 48 18
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 48 19
No Yes Macaca mulatta 69_1 Rhesus monkey 51 21
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 57 21
No Yes Otolemur garnettii 69_3 Small-eared galago 48 19
No Yes Microcebus murinus 69_1 Gray mouse lemur 46 17
No Yes Rattus norvegicus 69_3.4 Norway rat 44 18
No Yes Mus musculus 69_38 House mouse 49 18
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 44 17
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 50 21
No Yes Cavia porcellus 69_3 Domestic guinea pig 43 17
No Yes Oryctolagus cuniculus 69_2 Rabbit 41 19
No Yes Ochotona princeps 69 American pika 43 17
No Yes Tupaia belangeri 69 Northern tree shrew 37 15
No Yes Sus scrofa 69_10.2 Pig 39 18
No Yes Bos taurus 69_3.1 Cattle 49 19
No Yes Vicugna pacos 69_1 Alpaca 23 11
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 49 17
No Yes Mustela putorius furo 69_1.0 Domestic ferret 44 17
No Yes Ailuropoda melanoleuca 69_1 Giant panda 49 19
No Yes Canis familiaris 69_3.1 Dog 47 19
No Yes Felis catus 69 Domestic cat 41 17
No Yes Equus caballus 69_2 Horse 49 18
No Yes Myotis lucifugus 69_2.0 Little brown bat 41 17
No Yes Pteropus vampyrus 69_1 Large flying fox 45 18
No Yes Sorex araneus 69_1 European shrew 33 13
No Yes Erinaceus europaeus 69 Western European hedgehog 39 15
No Yes Procavia capensis 69_1 Cape rock hyrax 48 17
No Yes Loxodonta africana 69_3 African savanna elephant 49 18
No Yes Echinops telfairi 69 Small Madagascar hedgehog 40 18
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 37 16
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 22 8
No Yes Macropus eugenii 69_1.0 Tammar wallaby 48 16
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 44 17
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 47 18
No Yes Ornithorhynchus anatinus 69_5 Platypus 38 16
No Yes Petromyzon marinus 69_7.0 Sea lamprey 19 11
No Yes Meleagris gallopavo 69_2 Turkey 41 14
No Yes Gallus gallus 69_2 Chicken 39 13
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 41 15
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 32 13
No Yes Anolis carolinensis 69_2.0 Green anole 42 17
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 55 20
No Yes Latimeria chalumnae 69_1 Coelacanth 53 21
No Yes Gadus morhua 69_1 Atlantic cod 80 26
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 65 20
No Yes Takifugu rubripes 69_4 Torafugu 67 22
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 68 24
No Yes Oryzias latipes 69_1 Japanese medaka 62 21
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 72 23
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 78 26
No Yes Danio rerio 69_9 Zebrafish 96 32
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 36 15
No Yes Ciona intestinalis 69 Vase tunicate 33 10
No Yes Drosophila melanogaster 69_5 Fruit fly 29 11
No Yes Caenorhabditis elegans 69_215 Roundworm 19 7
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 5 4
No Yes Arabidopsis thaliana 10 Thale cress 43 18
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   2 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   45525 15803
No Yes Protozoadb 2010_08 (Protozoadb)   295 166
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   4 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   2923 1256
No Yes Uniprot 2018_03 genome   38821 17623
No Yes Global Ocean Sampling Expedition (GOS)   47 34
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   51 34
No Yes Protein Data Bank (all PDB sequenc)   278 180
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   731 731
No Yes TargetDB (Targets)   95 57
No Yes UniProt viral sequences (Viral)   1 1

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