SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Monooxygenase (hydroxylase) regulatory protein superfamily domain assignments
in
Leptothrix cholodnii SP-6

Assignment details

(show help)


Leptothrix cholodnii SP-6 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|171060035|ref|YP_001792384.1|   7.19e-30   1-88   Monooxygenase (hydroxylase) regulatory protein  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Monooxygenase (hydroxylase) regulatory protein domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   3818 3818
No Yes Capitella sp. I   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Pseudonocardia dioxanivorans CB1190   7 7
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Nocardioides sp. JS614   1 1
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   2 2
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Amycolicicoccus subflavus DQS3-9A1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   5 5
No Yes Mycobacterium marinum M   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Sulfobacillus acidophilus DSM 10332   3 3
No Yes Kyrpidia tusciae DSM 2912   4 4
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Arcobacter sp. L   1 1
No Yes Dechloromonas aromatica RCB   2 2
No Yes Thauera sp. MZ1T   1 1
No Yes Azoarcus sp. BH72   3 3
No Yes Methylibium petroleiphilum PM1   5 5
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Ralstonia eutropha JMP134   3 3
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   3 3
No Yes Cupriavidus necator N-1   2 2
No Yes Ralstonia eutropha H16   1 1
No Yes Ralstonia pickettii 12D   2 2
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Verminephrobacter eiseniae EF01-2   2 2
No Yes Alicycliphilus denitrificans K601   1 1
No Yes Acidovorax sp. JS42   1 1
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Sphingobium japonicum UT26S   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Methylocella silvestris BL2   2 2
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Hyphomicrobium sp. MC1   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Methylomonas methanica MC09   1 1
No Yes Methylococcus capsulatus str. Bath   1 1
No Yes Pseudoxanthomonas spadix BD-a59   2 2
No Yes Azotobacter vinelandii DJ   2 2
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Acinetobacter calcoaceticus PHEA-2   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Frankia sp. CcI3   2 2
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Sulfobacillus acidophilus TPY   3 3
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Pandoraea pnomenusa 3kgm   2 2
No Yes Ralstonia pickettii 12J   2 2
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Alicycliphilus denitrificans BC   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Bradyrhizobium sp. BTAi1   2 2
No Yes Bradyrhizobium oligotrophicum S58   2 2
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Azotobacter vinelandii CA6   2 2
No Yes Azotobacter vinelandii CA   2 2
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   1 1
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Cycloclasticus zancles 7-ME   2 2
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes 3_050719R (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Combined (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes NCBI 2017_08 genome   2151 2151
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   3 3
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   4 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   3 3
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   60 60
No Yes Uniprot 2018_03 genome   1197 1197
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   18 18
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   36 36
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   77 77

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]