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ADP-ribosylation superfamily domain assignments
in
Coniophora puteana

Assignment details

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Coniophora puteana has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Conpu1|107060|estExt_Genewise1.C_9_t10360   1.42e-51   15-198   Tpt1/KptA  
jgi|Conpu1|120261|estExt_Genewise1Plus.C_3_t40167   2.97e-23   186-394   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|120389|estExt_Genewise1Plus.C_3_t40324   1.44e-25   206-415   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|138478|estExt_fgenesh1_pm.C_90370   1.51e-32   23-231   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|142705|estExt_fgenesh1_pg.C_3_t20121   1.15e-25   109-316   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|142722|estExt_fgenesh1_pg.C_3_t20140   2.21e-26   206-416   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|142751|estExt_fgenesh1_pg.C_3_t20174   4.12e-26   206-416   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|163554|estExt_Genemark1.C_3_t20291   9.35e-27   23-234   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|167104|estExt_Genemark1.C_9_t20034   9.11e-26   277-491   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|59609|e_gw1.9.224.1   9.59e-21   13-161   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|71184|fgenesh1_pg.3_#_629   4.89e-25   109-317   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|85969|fgenesh1_kg.21_#_41_#_isotig04144   4.53e-19   747-872   Poly(ADP-ribose) polymerase, C-terminal domain  
jgi|Conpu1|94713|estExt_Genewise1.C_1_t20293   2.81e-56   317-538   Poly(ADP-ribose) polymerase, C-terminal domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   138709 138709
No Yes Homo sapiens 76_38 Human 81 81
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 22 22
No Yes Gorilla gorilla 76_3.1 Western gorilla 35 35
No Yes Pongo abelii 76_2 Sumatran orangutan 21 21
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 25 25
No Yes Papio anubis 76 Olive baboon 24 24
No Yes Macaca mulatta 76_1 Rhesus monkey 31 31
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 51 51
No Yes Otolemur garnettii 76_3 Small-eared galago 25 25
No Yes Microcebus murinus 76_1 Gray mouse lemur 21 19
No Yes Rattus norvegicus 76_5.0 Norway rat 24 24
No Yes Mus musculus 76_38 House mouse 52 52
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 18 17
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 23 23
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 22 22
No Yes Cavia porcellus 76_3 Domestic guinea pig 26 26
No Yes Oryctolagus cuniculus 76_2 Rabbit 33 33
No Yes Ochotona princeps 76 American pika 24 22
No Yes Tupaia belangeri 76 Northern tree shrew 18 18
No Yes Sus scrofa 76_10.2 Pig 32 32
No Yes Bos taurus 76_3.1 Cattle 30 30
No Yes Ovis aries 76_3.1 Sheep 31 31
No Yes Vicugna pacos 76_1 Alpaca 15 14
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 21 21
No Yes Mustela putorius furo 76_1.0 Domestic ferret 23 23
No Yes Ailuropoda melanoleuca 76_1 Giant panda 23 23
No Yes Canis familiaris 76_3.1 Dog 34 34
No Yes Felis catus 76_6.2 Domestic cat 22 22
No Yes Equus caballus 76_2 Horse 26 26
No Yes Myotis lucifugus 76_2.0 Little brown bat 33 33
No Yes Pteropus vampyrus 76_1 Large flying fox 24 24
No Yes Sorex araneus 76_1 European shrew 17 17
No Yes Erinaceus europaeus 76 Western European hedgehog 19 19
No Yes Procavia capensis 76_1 Cape rock hyrax 23 21
No Yes Loxodonta africana 76_3 African savanna elephant 32 32
No Yes Echinops telfairi 76 Small Madagascar hedgehog 17 17
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 25 25
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 16 15
No Yes Macropus eugenii 76_1.0 Tammar wallaby 21 19
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 27 27
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 27 26
No Yes Ornithorhynchus anatinus 76_5 Platypus 27 27
No Yes Saccoglossus kowalevskii v3.0   36 36
No Yes Petromyzon marinus 76_7.0 Sea lamprey 23 21
No Yes Meleagris gallopavo 76_2 Turkey 27 27
No Yes Gallus gallus 76_4 Chicken 25 25
No Yes Anas platyrhynchos 76_1.0 Mallard 21 21
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 17 17
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 23 23
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 33 33
No Yes Anolis carolinensis 76_2.0 Green anole 30 30
No Yes Xenopus laevis African clawed frog 36 36
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 43 41
No Yes Latimeria chalumnae 76_1 Coelacanth 43 41
No Yes Lepisosteus oculatus 76 Spotted gar 47 45
No Yes Gadus morhua 76_1 Atlantic cod 60 60
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 28 28
No Yes Takifugu rubripes 76_4 Torafugu 49 49
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 32 32
No Yes Oryzias latipes 76_1 Japanese medaka 30 30
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 39 39
No Yes Poecilia formosa 76 Amazon molly 40 39
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 46 44
No Yes Astyanax mexicanus 76 Mexican tetra 48 44
No Yes Danio rerio 76_9 Zebrafish 58 55
No Yes Oikopleura dioica   7 6
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 24 24
No Yes Ciona intestinalis 76 Vase tunicate 17 17
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 14 14
No Yes Adineta vaga   685 678
No Yes Octopus bimaculoides 280   21 20
No Yes Crassostrea gigas 22 Pacific oyster 55 51
No Yes Lottia gigantea Owl limpet 20 20
No Yes Helobdella robusta   19 18
No Yes Capitella sp. I   32 32
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 2 2
No Yes Bombyx mori Domestic silkworm 3 3
No Yes Nasonia vitripennis Jewel wasp 4 4
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 7 7
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 4 4
No Yes Linepithema humile v1.1 Argentine ant 4 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 4 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 4
No Yes Atta cephalotes v1.1   4 4
No Yes Camponotus floridanus v3.3 Florida carpenter ant 4 4
No Yes Lucilia cuprina Australian sheep blowfly 2 2
No Yes Drosophila grimshawi 1.3   3 3
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   3 3
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   3 2
No Yes Drosophila yakuba 1.3   3 3
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 5 5
No Yes Drosophila erecta 1.3   2 2
No Yes Drosophila ananassae 1.3   2 2
No Yes Drosophila virilis 1.2   3 3
No Yes Drosophila mojavensis 1.3   3 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 5 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 3 3
No Yes Anopheles darlingi 22 American malaria mosquito 2 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 3
No Yes Tribolium castaneum 3.0 Red flour beetle 12 11
No Yes Pediculus humanus corporis (Early assembly) Human body louse 3 3
No Yes Acyrthosiphon pisum Pea aphid 5 5
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 14 14
No Yes Strigamia maritima 22   6 6
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 2 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 6 6
No Yes Pristionchus pacificus   14 13
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Onchocerca volvulus 22   3 3
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 4 4
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   7 7
No Yes Caenorhabditis remanei   8 8
No Yes Caenorhabditis elegans 76_235 Roundworm 4 4
No Yes Caenorhabditis briggsae 2   3 3
No Yes Trichinella spiralis 22   2 2
No Yes Hymenolepis microstoma   7 6
No Yes Echinococcus multilocularis   4 4
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 5 5
No Yes Schistosoma mansoni   7 6
No Yes Mnemiopsis leidyi Sea walnut 13 13
No Yes Acropora digitifera v1.0   48 45
No Yes Nematostella vectensis 1.0 Starlet sea anemone 15 15
No Yes Hydra vulgaris   11 11
No Yes Amphimedon queenslandica   51 51
No Yes Trichoplax adhaerens   27 27
No Yes Proterospongia sp. ATCC 50818   53 53
No Yes Monosiga brevicollis   51 49
No Yes Sphaeroforma arctica JP610   10 10
No Yes Capsaspora owczarzaki ATCC 30864   14 14
No Yes Conidiobolus coronatus NRRL28638 v1.0   5 5
No Yes Mortierella verticillata NRRL 6337   6 6
No Yes Phycomyces blakesleeanus   1 1
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Mucor circinelloides   2 2
No Yes Rhizomucor miehei CAU432   1 1
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   2 2
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   2 2
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Rhodotorula graminis WP1 v1.0   3 3
No Yes Sporobolomyces roseus IAM 13481   1 1
No Yes Microbotryum violaceum 22   4 4
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   6 6
No Yes Piloderma croceum F 1598 v1.0   15 15
No Yes Serpula lacrymans var. lacrymans S7.9   20 19
No Yes Coniophora puteana   13 13
No Yes Hydnomerulius pinastri v2.0   8 8
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   6 6
No Yes Pisolithus microcarpus 441 v1.0   5 5
No Yes Pisolithus tinctorius Marx 270 v1.0   6 6
No Yes Scleroderma citrinum Foug A v1.0   7 7
No Yes Coprinopsis cinerea okayama7 130 v3   12 12
No Yes Pleurotus ostreatus Oyster mushroom 8 8
No Yes Amanita thiersii Skay4041 v1.0   8 8
No Yes Amanita muscaria Koide v1.0 Fly agaric 6 6
No Yes Galerina marginata v1.0   12 12
No Yes Hebeloma cylindrosporum h7 v2.0   20 20
No Yes Laccaria bicolor S238N-H82   12 12
No Yes Agaricus bisporus var. bisporus   5 5
No Yes Schizophyllum commune   12 12
No Yes Stereum hirsutum FP-91666 SS1 v1.0   19 19
No Yes Heterobasidion annosum   3 3
No Yes Gloeophyllum trabeumv1.0   8 8
No Yes Punctularia strigosozonata v1.0   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   26 26
No Yes Fomitiporia mediterranea v1.0   4 4
No Yes Tulasnella calospora AL13/4D v1.0   66 65
No Yes Postia placenta   19 19
No Yes Wolfiporia cocos MD-104 SS10 v1.0   10 10
No Yes Fomitopsis pinicolav1.0   13 13
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   13 12
No Yes Phanerochaete chrysosporium RP-78 2.1   8 8
No Yes Dichomitus squalens   4 4
No Yes Trametes versicolor v1.0   5 5
No Yes Tremella mesenterica Witches' butter 4 3
No Yes Daldinia eschscholzii EC12 v1.0   6 6
No Yes Apiospora montagnei NRRL 25634 v1.0   9 9
No Yes Magnaporthe poae ATCC 64411 22   7 7
No Yes Magnaporthe grisea 70-15   22 22
No Yes Podospora anserina   3 3
No Yes Sporotrichum thermophile ATCC 42464   5 5
No Yes Thielavia terrestris NRRL 8126   5 5
No Yes Chaetomium globosum CBS 148.51   5 5
No Yes Neurospora tetrasperma   4 4
No Yes Neurospora discreta FGSC 8579   3 3
No Yes Neurospora crassa OR74A   4 4
No Yes Cryphonectria parasitica Chestnut blight fungus 6 6
No Yes Verticillium albo-atrum VaMs.102   4 4
No Yes Verticillium dahliae VdLs.17   5 5
No Yes Acremonium alcalophilumv 1.0   4 4
No Yes Glomerella graminicola 22   5 5
No Yes Fusarium graminearum   5 5
No Yes Nectria haematococca mpVI   7 7
No Yes Fusarium oxysporum f. sp. lycopersici 4286   7 7
No Yes Fusarium verticillioides 7600   4 4
No Yes Trichoderma asperellum CBS 433.97 v1.0   4 4
No Yes Trichoderma atroviride   4 4
No Yes Trichoderma citrinoviride v1.0   4 4
No Yes Trichoderma reesei 1.2   5 5
No Yes Trichoderma virens Gv29-8   5 5
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   6 6
No Yes Trichoderma harzianum CBS 226.95 v1.0   5 5
No Yes Amorphotheca resinae v1.0 Creosote fungus 6 6
No Yes Botrytis cinerea B05.10   4 4
No Yes Sclerotinia sclerotiorum   4 4
No Yes Blumeria graminis 22   3 3
No Yes Didymella exigua CBS 183.55 v1.0   5 5
No Yes Leptosphaeria maculans 22   5 5
No Yes Setosphaeria turcica v1.0   5 5
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   4 4
No Yes Cochliobolus victoriae FI3 v1.0   5 5
No Yes Cochliobolus carbonum 26-R-13 v1.0   4 4
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 4 4
No Yes Alternaria brassicicola   4 4
No Yes Cochliobolus lunatus m118 v2.0   5 5
No Yes Pyrenophora teres f. teres 22   4 4
No Yes Pyrenophora tritici-repentis   4 4
No Yes Stagonospora nodorum   5 5
No Yes Mycosphaerella graminicola IPO323   3 3
No Yes Zasmidium cellare ATCC 36951 v1.0   6 6
No Yes Dothistroma septosporum   6 6
No Yes Septoria musiva v1.0   4 4
No Yes Mycosphaerella fijiensis CIRAD86   4 4
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   3 3
No Yes Paracoccidioides brasiliensis Pb18   3 3
No Yes Coccidioides posadasii RMSCC 3488   3 3
No Yes Coccidioides immitis RS   3 3
No Yes Ajellomyces dermatitidis SLH14081   2 2
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   3 3
No Yes Trichophyton equinum CBS 127.97   3 3
No Yes Trichophyton verrucosum HKI 0517   3 3
No Yes Arthroderma benhamiae CBS 112371   3 3
No Yes Trichophyton tonsurans CBS 112818   3 3
No Yes Trichophyton rubrum CBS 118892   3 3
No Yes Uncinocarpus reesii 1704   3 3
No Yes Aspergillus zonatus v1.0   5 5
No Yes Penicillium chrysogenum Wisconsin 54-1255   6 6
No Yes Penicillium chrysogenum v1.0   5 5
No Yes Aspergillus acidus v1.0   4 4
No Yes Aspergillus fumigatus Af293   4 4
No Yes Aspergillus brasiliensis v1.0   4 4
No Yes Aspergillus nidulans FGSC A4   4 4
No Yes Aspergillus sydowii v1.0   5 5
No Yes Aspergillus versicolor v1.0   5 5
No Yes Aspergillus glaucus   4 4
No Yes Aspergillus carbonarius ITEM 5010   3 3
No Yes Neosartorya fischeri NRRL 181   4 4
No Yes Aspergillus terreus NIH2624   4 4
No Yes Aspergillus tubingensis v1.0   4 4
No Yes Aspergillus wentii v1.0   4 4
No Yes Aspergillus oryzae RIB40   3 3
No Yes Aspergillus niger 22   4 4
No Yes Aspergillus niger ATCC 1015   4 4
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Aspergillus clavatus NRRL 1   4 4
No Yes Penicillium marneffei ATCC 18224   4 4
No Yes Tuber melanosporum Mel28 22   4 4
No Yes Tuber melanosporum Vittad Perigord truffle 4 4
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   1 1
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida dubliniensis CD36   1 1
No Yes Candida tropicalis MYA-3404   1 1
No Yes Candida parapsilosis   1 1
No Yes Candida albicans SC5314   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   1 1
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   3 3
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Catenaria anguillulae PL171 v1.0   7 7
No Yes Allomyces macrogynus ATCC 38327   3 3
No Yes Spizellomyces punctatus DAOM BR117   6 6
No Yes Dictyostelium discoideum   20 20
No Yes Dictyostelium purpureum   24 24
No Yes Entamoeba dispar 1.2   8 8
No Yes Entamoeba invadens 1.2   15 15
No Yes Entamoeba histolytica 1   9 9
No Yes Selaginella moellendorffii   41 41
No Yes Pinus taeda Loblolly pine 24 23
No Yes Picea abies Norway spruce 14 14
No Yes Eucalyptus grandis v201 Rose gum 21 21
No Yes Theobroma cacao B97-61/B2 v1 Cacao 19 19
No Yes Gossypium raimondii v221   68 68
No Yes Citrus clementina v165   25 25
No Yes Citrus sinensis v154 Sweet orange 17 17
No Yes Thellungiella halophila v173   21 21
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 30 29
No Yes Capsella rubella v183   20 20
No Yes Arabidopsis lyrata Lyrate rockcress 25 25
No Yes Arabidopsis thaliana 10 Thale cress 24 24
No Yes Carica papaya Papaya 13 13
No Yes Medicago truncatula Barrel medic 40 40
No Yes Phaseolus vulgaris v186 French bean 22 22
No Yes Glycine max v109 Soybean 40 39
No Yes Cucumis sativus v122 Cucumber 25 25
No Yes Fragaria vesca Wild strawberry 20 20
No Yes Malus domestica v196 Apple 38 37
No Yes Prunus persica v139 Peach 17 17
No Yes Linum usitatissimum v200 Flax 28 28
No Yes Manihot esculenta v147 Cassava 27 27
No Yes Populus trichocarpa v156 Black cottonwood 34 34
No Yes Vitis vinifera Wine grape 17 17
No Yes Mimulus guttatus v140 Spotted monkey flower 23 23
No Yes Solanum lycopersicum v.2.3 Tomato 24 24
No Yes Solanum tuberosum Potato 28 28
No Yes Actinidia chinensis Hongyang   27 26
No Yes Aquilegia coerulea v195   28 27
No Yes Triticum urartu 22   17 16
No Yes Triticum aestivum 22 Bread wheat 46 46
No Yes Aegilops tauschii 22   18 18
No Yes Brachypodium distachyon Stiff brome 30 30
No Yes Oryza barthii 22 African wild rice 26 25
No Yes Oryza meridionalis 22   18 18
No Yes Oryza glumaepatula 22   29 29
No Yes Oryza glaberrima African rice 17 17
No Yes Oryza punctata 22   25 25
No Yes Oryza nivara 22   29 29
No Yes Oryza brachyantha 22 Malo sina 15 15
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 32 32
No Yes Oryza sativa v193 Rice 32 32
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 24 24
No Yes Panicum virgatum v202 Switchgrass 39 39
No Yes Setaria italica v164 Foxtail millet 20 20
No Yes Zea mays subsp. mays Maize 32 32
No Yes Zea mays v181 Maize 39 39
No Yes Sorghum bicolor Sorghum 22 20
No Yes Musa balbisiana Balbis banana 38 37
No Yes Musa acuminata 22 Wild Malaysian banana 39 39
No Yes Amborella trichopoda 22   14 14
No Yes Physcomitrella patens   14 13
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   3 3
No Yes Volvox carteri f. nagariensis   3 3
No Yes Volvox carteri v199   3 3
No Yes Chlamydomonas reinhardtii 4.0   4 4
No Yes Ostreococcus sp. RCC809   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   3 3
No Yes Micromonas pusilla CCMP1545 v3.0   3 3
No Yes Porphyridium purpureum 02_2012   3 3
No Yes Thecamonas trahens ATCC 50062   20 20
No Yes Bigelowiella natans CCMP2755 22   25 25
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   13 13
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   3 3
No Yes Trypanosoma cruzi strain CL Brener   3 3
No Yes Trypanosoma congolense 2.4   3 3
No Yes Trypanosoma brucei gambiense v4.1   3 3
No Yes Trypanosoma brucei TREU927 v4.1   3 3
No Yes Ectocarpus siliculosus   28 28
No Yes Aureococcus anophagefferens   8 8
No Yes Albugo laibachii 22   6 6
No Yes Pythium iwayamai DAOM BR242034 22   9 9
No Yes Pythium arrhenomanes ATCC 12531 22   7 7
No Yes Pythium ultimum v1.7-2   9 9
No Yes Pythium aphanidermatum DAOM BR444 22   7 7
No Yes Pythium irregulare DAOM BR486 22   8 8
No Yes Pythium vexans DAOM BR484 22   9 9
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 9 9
No Yes Phytophthora sojae 1.1   5 4
No Yes Phytophthora infestans T30-4   4 3
No Yes Phytophthora capsici   5 5
No Yes Hyaloperonospora arabidopsidis 22   2 2
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   10 10
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   10 10
No Yes Paramecium tetraurelia   35 35
No Yes Tetrahymena thermophila SB210 1   42 41
No Yes Ichthyophthirius multifiliis strain G5   4 4
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   6 4
No Yes Toxoplasma gondii VEG   5 3
No Yes Toxoplasma gondii ME49   6 4
No Yes Toxoplasma gondii GT1   5 3
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Plasmodium chabaudi   2 2
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   164 159
No Yes Naegleria gruberi   29 29
No Yes Trichomonas vaginalis   9 9
No Yes Guillardia theta CCMP2712 v1.0   44 44
No Yes Emiliania huxleyi CCMP1516   125 124
No Yes Leptolyngbya sp. PCC 7376   2 2
No Yes Acaryochloris marina MBIC11017   2 2
No Yes Synechococcus sp. CC9311   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   2 2
No Yes Anabaena variabilis ATCC 29413   2 2
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Mycoplasma penetrans HF-2   1 1
No Yes Mycoplasma pneumoniae 309   1 1
No Yes Slackia heliotrinireducens DSM 20476   2 2
No Yes Ilumatobacter coccineus   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Blastococcus saxobsidens DD2   1 1
No Yes Geodermatophilus obscurus DSM 43160   2 2
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   11 5
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   4 4
No Yes Kitasatospora setae KM-6054   4 4
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   3 3
No Yes Streptomyces flavogriseus ATCC 33331   3 3
No Yes Streptomyces sp. SirexAA-E   3 3
No Yes Streptomyces griseus subsp. griseus NBRC 13350   2 2
No Yes Streptomyces avermitilis MA-4680   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   4 4
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   2 2
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   3 3
No Yes Amycolatopsis mediterranei U32   4 3
No Yes Kribbella flavida DSM 17836   2 2
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Verrucosispora maris AB-18-032   2 2
No Yes Micromonospora sp. L5   2 2
No Yes Micromonospora aurantiaca ATCC 27029   2 2
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Segniliparus rotundus DSM 44985   1 1
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Rhodococcus jostii RHA1   4 4
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus opacus B4   3 3
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   3 3
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Amycolicicoccus subflavus DQS3-9A1   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium avium 104   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium canettii CIPT 140010059   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium marinum M   2 2
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Corynebacterium ulcerans 0102   1 1
No Yes Corynebacterium variabile DSM 44702   1 1
No Yes Corynebacterium diphtheriae NCTC 13129   1 1
No Yes Sanguibacter keddieii DSM 10542   1 1
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Jonesia denitrificans DSM 20603   1 1
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Herpetosiphon aurantiacus DSM 785   3 3
No Yes Roseiflexus sp. RS-1   2 2
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Deinococcus gobiensis I-0   2 2
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   2 2
No Yes Megasphaera elsdenii DSM 20460   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   2 2
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Eubacterium siraeum   1 1
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ruminococcus sp.   1 1
No Yes Ruminococcus bromii   1 1
No Yes Ruminococcus albus 7   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   2 2
No Yes Eubacterium rectale ATCC 33656   2 2
No Yes Coprococcus sp. ART55/1   1 1
No Yes Butyrivibrio proteoclasticus B316   4 4
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   4 4
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Clostridium acetobutylicum ATCC 824   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Halanaerobium hydrogeniformans   1 1
No Yes Carnobacterium sp. 17-4   1 1
No Yes Tetragenococcus halophilus NBRC 12172   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus kefiranofaciens ZW3   1 1
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Lactobacillus amylovorus GRL1118   1 1
No Yes Lactobacillus gasseri ATCC 33323   2 2
No Yes Lactobacillus buchneri NRRL B-30929   1 1
No Yes Lactobacillus buchneri   1 1
No Yes Lactobacillus brevis ATCC 367   1 1
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Streptococcus equi subsp. equi 4047   1 1
No Yes Streptococcus mitis B6   2 2
No Yes Streptococcus pyogenes str. Manfredo   1 1
No Yes Streptococcus sanguinis SK36   1 1
No Yes Exiguobacterium sp. AT1b   1 1
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Brevibacillus brevis NBRC 100599   3 3
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   2 2
No Yes Paenibacillus polymyxa M1   2 2
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Geobacillus sp. WCH70   2 2
No Yes Geobacillus thermodenitrificans NG80-2   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus weihenstephanensis KBAB4   2 2
No Yes Bacillus thuringiensis str. Al Hakam   2 2
No Yes Bacillus cereus 03BB102   4 4
No Yes Bacillus anthracis str. A0248   3 3
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Saprospira grandis str. Lewin   3 3
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   3 3
No Yes Flexibacter litoralis DSM 6794   3 3
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Fibrella aestuarina   2 2
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Spirosoma linguale DSM 74   3 3
No Yes Runella slithyformis DSM 19594   2 2
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Flavobacterium branchiophilum FL-15   2 2
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Waddlia chondrophila WSU 86-1044   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Parachlamydia acanthamoebae UV-7   2 2
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Rhodopirellula baltica SH 1   3 3
No Yes Turneriella parva DSM 21527   2 2
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   2 2
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Sphaerochaeta pleomorpha str. Grapes   1 1
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Thermodesulfobacterium sp. OPB45   1 1
No Yes Kosmotoga olearia TBF 19.5.1   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes Leptotrichia buccalis C-1013-b   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Desulfarculus baarsii DSM 2075   1 1
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Geobacter sulfurreducens KN400   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Dechloromonas aromatica RCB   2 2
No Yes Dechlorosoma suillum PS   1 1
No Yes Chromobacterium violaceum ATCC 12472   6 6
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia xenovorans LB400   5 5
No Yes Ralstonia solanacearum CFBP2957   2 2
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Delftia sp. Cs1-4   2 2
No Yes Delftia acidovorans SPH-1   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax sp. JS42   1 1
No Yes Acidovorax citrulli AAC00-1   3 3
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Bordetella avium 197N   3 2
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Nitrosomonas eutropha C91   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter crescentus NA1000   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   2 2
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Novosphingobium sp. PP1Y   1 1
No Yes Novosphingobium aromaticivorans DSM 12444   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Sphingobium japonicum UT26S   1 1
No Yes Sphingobium chlorophenolicum L-1   1 1
No Yes Sphingomonas wittichii RW1   1 1
No Yes Maricaulis maris MCS10   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Pseudovibrio sp. FO-BEG1   2 2
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Tistrella mobilis KA081020-065   2 2
No Yes Rhodospirillum centenum SW   1 1
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Gluconacetobacter xylinus NBRC 3288   2 2
No Yes Granulibacter bethesdensis CGDNIH1   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Candidatus Puniceispirillum marinum IMCC1322   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Starkeya novella DSM 506   1 1
No Yes Xanthobacter autotrophicus Py2   2 2
No Yes Azorhizobium caulinodans ORS 571   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   2 2
No Yes Methylobacterium sp. 4-46   2 2
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium nodulans ORS 2060   2 2
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Parvibaculum lavamentivorans DS-1   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   2 2
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   3 3
No Yes Agrobacterium tumefaciens str. C58   2 2
No Yes Agrobacterium radiobacter K84   2 2
No Yes Agrobacterium sp. H13-3   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocella silvestris BL2   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Pelagibacterium halotolerans B2   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   1 1
No Yes Hyphomicrobium denitrificans ATCC 51888   1 1
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Methylocystis sp. SC2   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   2 2
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio harveyi ATCC BAA-1116   4 4
No Yes Vibrio parahaemolyticus RIMD 2210633   2 2
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio cholerae O395   2 2
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Halomonas elongata DSM 2581   2 2
No Yes Frateuria aurantia DSM 6220   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   2 2
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Legionella pneumophila str. Corby   2 2
No Yes Photorhabdus asymbiotica   2 2
No Yes Photorhabdus luminescens subsp. laumondii TTO1   3 3
No Yes Xenorhabdus bovienii SS-2004   2 2
No Yes Xenorhabdus nematophila ATCC 19061   3 3
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   2 2
No Yes Serratia proteamaculans 568   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   2 2
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 2
No Yes Erwinia tasmaniensis Et1/99   5 5
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia pyrifoliae Ep1/96   3 3
No Yes Erwinia amylovora ATCC 49946   3 3
No Yes Cronobacter sakazakii ES15   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   2 2
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   3 3
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   2 2
No Yes Citrobacter rodentium ICC168   2 2
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   2 2
No Yes Pseudomonas syringae pv. tomato str. DC3000   11 11
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   8 8
No Yes Pseudomonas protegens Pf-5   2 2
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   3 3
No Yes Pseudomonas sp. VLB120   7 7
No Yes Pyrolobus fumarii 1A   1 1
No Yes Hyperthermus butylicus DSM 5456   1 1
No Yes Ignisphaera aggregans DSM 17230   1 1
No Yes Aeropyrum pernix K1   1 1
No Yes Ignicoccus hospitalis KIN4/I   1 1
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Staphylothermus marinus F1   1 1
No Yes Thermofilum sp. 1910b   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Pyrobaculum sp. 1860   1 1
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Methanocella arvoryzae MRE50   3 3
No Yes Methanocella conradii HZ254   1 1
No Yes Methanocella paludicola SANAE   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   1 1
No Yes Methanosaeta concilii GP6   1 1
No Yes Methanosalsum zhilinae DSM 4017   1 1
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanohalophilus mahii DSM 5219   1 1
No Yes Methanospirillum hungatei JF-1   2 2
No Yes Methanopyrus kandleri AV19   1 1
No Yes Ferroglobus placidus DSM 10642   2 2
No Yes Archaeoglobus profundus DSM 5631   2 2
No Yes Archaeoglobus veneficus SNP6   2 2
No Yes Archaeoglobus fulgidus DSM 4304   2 2
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermococcus barophilus MP   1 1
No Yes Pyrococcus sp. ST04   1 1
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Pyrococcus horikoshii OT3   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasmatales archaeon BRNA1   2 2
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Methanocaldococcus jannaschii DSM 2661   1 1
No Yes Methanobrevibacter sp. AbM4   1 1
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 57 55
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 3 3
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 3 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 6 6
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 4 4
No Yes Cryptococcus neoformans var. grubii H99   3 2
No Yes Cryptococcus neoformans B-3501A   2 1
No Yes Cryptococcus neoformans JEC21   2 1
No Yes Paracoccidioides brasiliensis Pb01   3 3
No Yes Paracoccidioides brasiliensis Pb03   3 3
No Yes Coccidioides posadasii str. Silveira   3 3
No Yes Coccidioides immitis RMSCC 3703   3 3
No Yes Coccidioides immitis RMSCC 2394   3 3
No Yes Coccidioides immitis H538.4   3 3
No Yes Ajellomyces dermatitidis ER-3   3 3
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   3 3
No Yes Histoplasma capsulatum G186AR   3 3
No Yes Aspergillus fumigatus A1163   4 4
No Yes Candida albicans WO-1   1 1
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Batrachochytrium dendrobatidis JEL423   4 4
No Yes Batrachochytrium dendrobatidis JAM81   4 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 19 19
No Yes Hordeum vulgare 22 Domesticated barley 36 36
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 20 19
No Yes Trypanosoma brucei Lister 427 v4.1   3 3
No Yes Neospora caninum Nc-Liverpool 6.2   6 4
No Yes Plasmodium falciparum HB3   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   3 3
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Prochlorococcus marinus str. MIT 9313   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   4 4
No Yes Oscillatoria acuminata PCC 6304   2 2
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   2 2
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Stanieria cyanosphaera PCC 7437   2 2
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   2 2
No Yes Anabaena cylindrica PCC 7122   2 2
No Yes Mycoplasma pneumoniae M129-B7   1 1
No Yes Mycoplasma pneumoniae FH   1 1
No Yes Mycoplasma pneumoniae M129   1 1
No Yes Frankia sp. CcI3   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces davawensis JCM 4913   3 3
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   4 4
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   2 2
No Yes Amycolatopsis mediterranei RB   4 3
No Yes Amycolatopsis mediterranei S699   4 3
No Yes Amycolatopsis mediterranei S699   4 3
No Yes Amycolatopsis orientalis HCCB10007   4 3
No Yes Actinoplanes friuliensis DSM 7358   4 3
No Yes Rhodococcus pyridinivorans SB3094   2 2
No Yes Rhodococcus erythropolis CCM2595   2 2
No Yes Nocardia brasiliensis ATCC 700358   6 4
No Yes Mycobacterium sp. MOTT36Y   1 1
No Yes Mycobacterium sp. JDM601   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   1 1
No Yes Mycobacterium sp. MCS   1 1
No Yes Mycobacterium canettii CIPT 140070017   1 1
No Yes Mycobacterium canettii CIPT 140060008   1 1
No Yes Mycobacterium canettii CIPT 140070008   1 1
No Yes Mycobacterium canettii CIPT 140070010   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis CAS/NITR204   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Corynebacterium terpenotabidum Y-11   1 1
No Yes Corynebacterium pseudotuberculosis 31   1 1
No Yes Corynebacterium diphtheriae CDCE 8392   1 1
No Yes Corynebacterium diphtheriae PW8   2 2
No Yes Corynebacterium diphtheriae C7 (beta)   1 1
No Yes Corynebacterium diphtheriae 31A   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Clostridium difficile BI1   2 1
No Yes Clostridium difficile R20291   2 1
No Yes Clostridium difficile CD196   2 1
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   3 3
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium botulinum BKT015925   3 2
No Yes Clostridium acetobutylicum DSM 1731   1 1
No Yes Clostridium acetobutylicum EA 2018   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis V583   2 2
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus amylovorus GRL 1112   1 1
No Yes Lactobacillus reuteri TD1   1 1
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus brevis KB290   1 1
No Yes Lactobacillus acidophilus La-14   1 1
No Yes Lactobacillus acidophilus NCFM   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   1 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Streptococcus equi subsp. zooepidemicus   1 1
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus pyogenes HSC5   2 2
No Yes Streptococcus pyogenes A20   1 1
No Yes Streptococcus pyogenes MGAS1882   1 1
No Yes Streptococcus pyogenes MGAS15252   1 1
No Yes Streptococcus pyogenes Alab49   1 1
No Yes Streptococcus pyogenes MGAS10750   1 1
No Yes Streptococcus pyogenes MGAS10270   1 1
No Yes Streptococcus pyogenes MGAS2096   1 1
No Yes Streptococcus pyogenes MGAS9429   2 2
No Yes Streptococcus pyogenes MGAS6180   2 2
No Yes Streptococcus pyogenes NZ131   2 2
No Yes Streptococcus pyogenes MGAS8232   1 1
No Yes Streptococcus pyogenes MGAS10394   3 3
No Yes Streptococcus pyogenes MGAS315   1 1
No Yes Streptococcus pyogenes SSI-1   1 1
No Yes Streptococcus pyogenes M1 476   1 1
No Yes Streptococcus pyogenes MGAS5005   1 1
No Yes Streptococcus pyogenes M1 GAS   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   3 3
No Yes Paenibacillus polymyxa CR1   2 2
No Yes Paenibacillus polymyxa SC2   3 3
No Yes Paenibacillus polymyxa E681   2 2
No Yes Listeria monocytogenes SLCC2479   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   1 1
No Yes Listeria monocytogenes FSL R2-561   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   2 2
No Yes Bacillus thuringiensis HD-771   2 2
No Yes Bacillus thuringiensis HD-789   2 2
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   4 4
No Yes Bacillus thuringiensis YBT-1518   5 5
No Yes Bacillus thuringiensis Bt407   4 4
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   3 3
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   2 2
No Yes Bacillus thuringiensis serovar finitimus YBT-020   2 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   6 5
No Yes Bacillus cereus FRI-35   2 2
No Yes Bacillus cereus biovar anthracis str. CI   3 3
No Yes Bacillus cereus AH820   3 3
No Yes Bacillus cereus AH187   2 2
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   2 2
No Yes Bacillus cereus Q1   2 2
No Yes Bacillus cereus F837/76   2 2
No Yes Bacillus cereus NC7401   2 2
No Yes Bacillus cereus E33L   2 2
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   2 2
No Yes Bacillus anthracis str. H9401   3 3
No Yes Bacillus anthracis str. CDC 684   3 3
No Yes Bacillus anthracis str. 'Ames Ancestor'   3 3
No Yes Bacillus anthracis str. Sterne   2 2
No Yes Bacillus anthracis str. Ames   2 2
No Yes Bacillus anthracis str. A2012   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Porphyromonas gingivalis TDC60   1 1
No Yes Alistipes shahii WAL 8301   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Nonlabens dokdonensis DSW-6   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   2 2
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   1 1
No Yes Fusobacterium nucleatum subsp. animalis 4_8   1 1
No Yes Bdellovibrio exovorus JSS   2 2
No Yes Geobacter sulfurreducens PCA   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Ralstonia solanacearum FQY_4   2 2
No Yes Ralstonia solanacearum Po82   2 2
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   2 2
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Caulobacter crescentus CB15   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Leisingera methylohalidivorans DSM 14336   1 1
No Yes Octadecabacter antarcticus 307   1 1
No Yes Octadecabacter arcticus 238   1 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   1 1
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   2 2
No Yes Rhizobium etli bv. mimosae str. Mim1   2 2
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   2 2
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Hyphomicrobium denitrificans 1NES1   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   2 2
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   2 2
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio cholerae O395   2 2
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Glaciecola psychrophila 170   2 2
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   2 2
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   2 2
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   2 2
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   2 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   2 2
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   3 3
No Yes Yersinia enterocolitica subsp. palearctica Y11   4 4
No Yes Serratia marcescens WW4   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Erwinia pyrifoliae DSM 12163   3 3
No Yes Erwinia amylovora CFBP1430   3 3
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   4 4
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Escherichia coli E24377A   2 2
No Yes Escherichia coli E. coli PMV-1   3 3
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   2 2
No Yes Escherichia coli str. 'clone D i14'   2 2
No Yes Escherichia coli UM146   2 2
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli UMNK88   2 2
No Yes Escherichia coli O83:H1 str. NRG 857C   2 2
No Yes Escherichia coli ABU 83972   2 2
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   2 2
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   2 2
No Yes Escherichia coli O55:H7 str. RM12579   3 3
No Yes Escherichia coli O55:H7 str. CB9615   3 3
No Yes Escherichia coli O26:H11 str. 11368   2 2
No Yes Escherichia coli O111:H- str. 11128   2 2
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   2 2
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   7 7
No Yes Pseudomonas syringae pv. syringae B728a   8 8
No Yes Pseudomonas monteilii SB3101   2 2
No Yes Pseudomonas monteilii SB3078   2 2
No Yes Pseudomonas putida H8234   2 2
No Yes Pseudomonas putida HB3267   9 9
No Yes Pseudomonas putida NBRC 14164   6 6
No Yes Pseudomonas putida DOT-T1E   6 6
No Yes Pseudomonas putida S16   3 3
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida W619   4 4
No Yes Pseudomonas putida ND6   4 4
No Yes Pseudomonas putida KT2440   11 11
No Yes Pseudomonas putida GB-1   7 7
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas fluorescens F113   9 9
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas aeruginosa SCV20265   4 4
No Yes Pseudomonas aeruginosa MTB-1   3 3
No Yes Pseudomonas aeruginosa LES431   3 3
No Yes Pseudomonas aeruginosa RP73   4 4
No Yes Pseudomonas aeruginosa B136-33   3 3
No Yes Pseudomonas aeruginosa PA1R   4 4
No Yes Pseudomonas aeruginosa PA1   4 4
No Yes Pseudomonas aeruginosa DK2   4 4
No Yes Pseudomonas aeruginosa NCGM2.S1   3 3
No Yes Pseudomonas aeruginosa M18   4 4
No Yes Pseudomonas aeruginosa LESB58   3 3
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   4 4
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Aeropyrum camini SY1 = JCM 12091   1 1
No Yes Methanomethylovorans hollandica DSM 15978   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus sp. CL1   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   1 1
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   1 1
No Yes Natronococcus occultus SP4   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 84 84
No Yes Homo sapiens (NCBI version) Human 43 43
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 25 25
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 3 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 4 4
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 3 3
No Yes Moniliophthora perniciosa FA553 (Genome survey)   10 10
No Yes Lotus japonicus (Early assembly)   33 32
No Yes Malus x domestica (Duplicate) Apple 38 37
No Yes Ricinus communis (Early assembly) Castor bean 20 20
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   34 34
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 22 22
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 24 24
No Yes Phoenix dactylifera (Early draft) Date palm 14 14
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   4 4
No Yes Homo sapiens 69_37 Human 24 24
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 22 22
No Yes Gorilla gorilla 69_3.1 Western gorilla 24 24
No Yes Pongo abelii 69_2 Sumatran orangutan 21 21
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 20 20
No Yes Macaca mulatta 69_1 Rhesus monkey 21 21
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 24 24
No Yes Otolemur garnettii 69_3 Small-eared galago 23 23
No Yes Microcebus murinus 69_1 Gray mouse lemur 21 19
No Yes Rattus norvegicus 69_3.4 Norway rat 22 22
No Yes Mus musculus 69_38 House mouse 25 25
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 18 17
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 23 23
No Yes Cavia porcellus 69_3 Domestic guinea pig 26 26
No Yes Oryctolagus cuniculus 69_2 Rabbit 27 27
No Yes Ochotona princeps 69 American pika 24 22
No Yes Tupaia belangeri 69 Northern tree shrew 18 18
No Yes Sus scrofa 69_10.2 Pig 27 27
No Yes Bos taurus 69_3.1 Cattle 25 25
No Yes Vicugna pacos 69_1 Alpaca 15 14
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 20 20
No Yes Mustela putorius furo 69_1.0 Domestic ferret 23 23
No Yes Ailuropoda melanoleuca 69_1 Giant panda 21 21
No Yes Canis familiaris 69_3.1 Dog 23 23
No Yes Felis catus 69 Domestic cat 16 16
No Yes Equus caballus 69_2 Horse 25 25
No Yes Myotis lucifugus 69_2.0 Little brown bat 32 32
No Yes Pteropus vampyrus 69_1 Large flying fox 23 23
No Yes Sorex araneus 69_1 European shrew 17 17
No Yes Erinaceus europaeus 69 Western European hedgehog 19 19
No Yes Procavia capensis 69_1 Cape rock hyrax 21 20
No Yes Loxodonta africana 69_3 African savanna elephant 23 23
No Yes Echinops telfairi 69 Small Madagascar hedgehog 17 17
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 18 17
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 16 15
No Yes Macropus eugenii 69_1.0 Tammar wallaby 20 18
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 22 22
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 27 26
No Yes Ornithorhynchus anatinus 69_5 Platypus 23 23
No Yes Petromyzon marinus 69_7.0 Sea lamprey 21 19
No Yes Meleagris gallopavo 69_2 Turkey 23 23
No Yes Gallus gallus 69_2 Chicken 25 25
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 17 17
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 29 29
No Yes Anolis carolinensis 69_2.0 Green anole 28 28
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 33 32
No Yes Latimeria chalumnae 69_1 Coelacanth 36 34
No Yes Gadus morhua 69_1 Atlantic cod 40 40
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 21 21
No Yes Takifugu rubripes 69_4 Torafugu 24 24
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 25 25
No Yes Oryzias latipes 69_1 Japanese medaka 27 27
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 39 39
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 35 33
No Yes Danio rerio 69_9 Zebrafish 48 45
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 18 18
No Yes Ciona intestinalis 69 Vase tunicate 17 17
No Yes Drosophila melanogaster 69_5 Fruit fly 3 3
No Yes Caenorhabditis elegans 69_215 Roundworm 3 3
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 20 20
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   5 5
No Yes 5_050719P (meta-genome)   5 5
No Yes 5_Below_upper_mesopelagic (meta-genome)   2 2
No Yes 6_Upper_euphotic (meta-genome)   4 4
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   4 4
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   4 4
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   5 5
No Yes Bath Hot Springs, filamentous community (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   29 29
No Yes Crater Hills (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   23 23
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   36 36
No Yes Dump top (Dump top) (meta-genome)   13 13
No Yes Endophytic microbiome from Rice (meta-genome)   9 9
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   5 5
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   14 14
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   29 29
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   2 2
No Yes Human Gut Community Subject 7 (meta-genome)   2 2
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   6 6
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   4 4
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   13 13
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   8 8
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   3 3
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   6 6
No Yes NCBI 2017_08 genome   84218 83520
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   13 13
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   101 97
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   24 24
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   8 8
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   6 6
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   2 2
No Yes Sludge/US, Jazz Assembly (meta-genome)   2 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   4 4
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   15 15
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   22 22
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   63 63
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   40 40
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   41 41
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   12 12
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   1885 1867
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   22 22
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   3 3
No Yes Termite Protist Endosymbiont Community (meta-genome)   4 4
No Yes Uniprot 2018_03 genome   30979 30491
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   5 5
No Yes Global Ocean Sampling Expedition (GOS)   751 751
No Yes NCBI plasmid sequences (Plasmids)   119 112
No Yes NCBI viral sequences (Viral)   169 169
No Yes PDB chains (SCOP 1.75) (PDB)   57 54
No Yes Protein Data Bank (all PDB sequenc)   1059 1026
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1723 1723
No Yes TargetDB (Targets)   111 111
No Yes The Salmonella enterica Pan-genome (meta-genome)   20 20
No Yes UniProt viral sequences (Viral)   107 107

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