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Prismane protein-like superfamily domain assignments
in
Brachypodium distachyon

Assignment details

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Brachypodium distachyon has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI3G12690.1   0.00000000101   83-185   Acetyl-CoA synthase  
EG:BRADI3G12690.2   0.000000000915   82-184   Acetyl-CoA synthase  
EG:BRADI3G12690.3   0.000000000696   83-185   Acetyl-CoA synthase  
EG:BRADI5G25390.1   0.00000861   835-918   Acetyl-CoA synthase  
 
Weak hits:
EG:BRADI1G27990.1   0.033   58-144   Acetyl-CoA synthase  

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Select to display   Genome       Domains   Proteins
No Yes ALL   51352 51352
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 2 2
No Yes Danio rerio 76_9 Zebrafish 27 3
No Yes Helobdella robusta   1 1
No Yes Sphaeroforma arctica JP610   1 1
No Yes Fusarium graminearum   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Lachancea kluyveri   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Dictyostelium discoideum   1 1
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   5 5
No Yes Entamoeba histolytica 1   1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 3 3
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   6 6
No Yes Citrus clementina v165   1 1
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 3 3
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 2 2
No Yes Arabidopsis thaliana 10 Thale cress 3 3
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 2 2
No Yes Phaseolus vulgaris v186 French bean 3 3
No Yes Glycine max v109 Soybean 6 6
No Yes Cucumis sativus v122 Cucumber 3 3
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 2 2
No Yes Linum usitatissimum v200 Flax 4 4
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 2 2
No Yes Solanum tuberosum Potato 2 2
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   3 3
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 7 7
No Yes Brachypodium distachyon Stiff brome 4 4
No Yes Oryza barthii 22 African wild rice 4 4
No Yes Oryza meridionalis 22   2 2
No Yes Oryza glumaepatula 22   5 5
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22   4 4
No Yes Oryza nivara 22   5 5
No Yes Oryza brachyantha 22 Malo sina 2 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 2 2
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Setaria italica v164 Foxtail millet 3 3
No Yes Zea mays subsp. mays Maize 8 8
No Yes Zea mays v181 Maize 9 9
No Yes Sorghum bicolor Sorghum 2 2
No Yes Musa balbisiana Balbis banana 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   3 3
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   4 4
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   5 5
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   3 3
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Cryptobacterium curtum DSM 15641   1 1
No Yes Eggerthella sp. YY7918   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Olsenella uli DSM 7084   1 1
No Yes Atopobium parvulum DSM 20469   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Dehalococcoides ethenogenes 195   2 2
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   2 2
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Finegoldia magna ATCC 29328   1 1
No Yes Veillonella parvula DSM 2008   2 2
No Yes Megasphaera elsdenii DSM 20460   1 1
No Yes Acidaminococcus intestini RyC-MR95   1 1
No Yes Acidaminococcus fermentans DSM 20731   1 1
No Yes Megamonas hypermegale   2 2
No Yes Selenomonas sputigena ATCC 35185   2 2
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   2 2
No Yes Natranaerobius thermophilus JW/NM-WN-LF   2 2
No Yes Symbiobacterium thermophilum IAM 14863   1 1
No Yes Clostridium clariflavum DSM 19732   3 3
No Yes Eubacterium siraeum   1 1
No Yes Clostridium cellulolyticum H10   4 4
No Yes Clostridium thermocellum ATCC 27405   2 2
No Yes Ethanoligenens harbinense YUAN-3   2 2
No Yes Faecalibacterium prausnitzii   1 1
No Yes Ruminococcus sp.   2 2
No Yes Ruminococcus bromii   1 1
No Yes Ruminococcus albus 7   2 2
No Yes Oscillibacter valericigenes Sjm18-20   1 1
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   4 4
No Yes Thermincola potens JR   6 6
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Desulfosporosinus acidiphilus SJ4   5 5
No Yes Desulfosporosinus orientis DSM 765   7 7
No Yes Dehalobacter sp. DCA   3 3
No Yes Dehalobacter sp. CF   3 3
No Yes Syntrophobotulus glycolicus DSM 8271   2 2
No Yes Desulfitobacterium hafniense Y51   6 6
No Yes Desulfitobacterium dehalogenans ATCC 51507   5 5
No Yes Desulfotomaculum reducens MI-1   4 4
No Yes Desulfotomaculum acetoxidans DSM 771   8 8
No Yes Desulfotomaculum kuznetsovii DSM 6115   6 6
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   5 5
No Yes Desulfotomaculum ruminis DSM 2154   3 3
No Yes Acetobacterium woodii DSM 1030   5 5
No Yes Eubacterium eligens ATCC 27750   2 2
No Yes Eubacterium limosum KIST612   3 3
No Yes Clostridium difficile 630   4 4
No Yes Clostridium sticklandii DSM 519   3 3
No Yes Filifactor alocis ATCC 35896   1 1
No Yes Clostridium saccharolyticum WM1   3 3
No Yes Clostridium phytofermentans ISDg   2 2
No Yes Clostridium lentocellum DSM 5427   2 2
No Yes [Ruminococcus] obeum   2 2
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Roseburia hominis A2-183   2 2
No Yes Roseburia intestinalis   2 2
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   2 2
No Yes Alkaliphilus metalliredigens QYMF   6 6
No Yes Clostridium sp. BNL1100   5 5
No Yes Clostridium novyi NT   2 2
No Yes Clostridium ljungdahlii DSM 13528   6 6
No Yes Clostridium kluyveri DSM 555   3 3
No Yes Clostridium beijerinckii NCIMB 8052   8 8
No Yes Clostridium tetani E88   2 2
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   6 6
No Yes Clostridium botulinum A str. ATCC 3502   3 3
No Yes Clostridium acetobutylicum ATCC 824   4 4
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Thermosediminibacter oceani DSM 16646   5 5
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   2 2
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   2 2
No Yes Caldicellulosiruptor kristjanssonii 177R1B   2 2
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 2
No Yes Caldicellulosiruptor bescii DSM 6725   1 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Thermodesulfobium narugense DSM 14796   2 2
No Yes Tepidanaerobacter acetatoxydans Re1   3 3
No Yes Thermoanaerobacter tengcongensis MB4   2 2
No Yes Carboxydothermus hydrogenoformans Z-2901   6 6
No Yes Moorella thermoacetica ATCC 39073   4 4
No Yes Ammonifex degensii KC4   3 3
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Acetohalobium arabaticum DSM 5501   4 4
No Yes Halothermothrix orenii H 168   1 1
No Yes Halanaerobium hydrogeniformans   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Anoxybacillus flavithermus WK1   1 1
No Yes Geobacillus sp. WCH70   2 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeobacteroides DSM 266   2 2
No Yes Chlorobium phaeovibrioides DSM 265   1 1
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   2 2
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Prosthecochloris aestuarii DSM 271   2 2
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Bacteroides sp. CF50   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella intermedia 17   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Porphyromonas asaccharolytica DSM 20707   1 1
No Yes Porphyromonas gingivalis ATCC 33277   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Fretibacterium fastidiosum   1 1
No Yes Thermovirga lienii DSM 17291   1 1
No Yes Aminobacterium colombiense DSM 12261   1 1
No Yes Thermanaerovibrio acidaminovorans DSM 6589   1 1
No Yes Anaerobaculum mobile DSM 13181   1 1
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Sphaerochaeta pleomorpha str. Grapes   1 1
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Treponema azotonutricium ZAS-9   3 3
No Yes Treponema primitia ZAS-2   3 3
No Yes Treponema brennaborense DSM 12168   1 1
No Yes Treponema denticola ATCC 35405   1 1
No Yes Spirochaeta africana DSM 8902   1 1
No Yes Spirochaeta thermophila DSM 6192   1 1
No Yes Thermodesulfatator indicus DSM 15286   4 4
No Yes Thermodesulfobacterium sp. OPB45   2 2
No Yes Desulfurispirillum indicum S5   2 2
No Yes Calditerrivibrio nitroreducens DSM 19672   1 1
No Yes Denitrovibrio acetiphilus DSM 12809   1 1
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Flexistipes sinusarabici DSM 4947   1 1
No Yes Marinitoga piezophila KA3   1 1
No Yes Petrotoga mobilis SJ95   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Kosmotoga olearia TBF 19.5.1   1 1
No Yes Fervidobacterium pennivorans DSM 9078   1 1
No Yes Fervidobacterium nodosum Rt17-B1   1 1
No Yes Thermosipho melanesiensis BI429   1 1
No Yes Thermosipho africanus TCF52B   2 2
No Yes Thermotoga lettingae TMO   1 1
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Thermotoga sp. RQ2   1 1
No Yes Thermotoga naphthophila RKU-10   1 1
No Yes Thermotoga petrophila RKU-1   1 1
No Yes Thermotoga neapolitana DSM 4359   1 1
No Yes Thermotoga maritima MSB8   1 1
No Yes Thermovibrio ammonificans HB-1   1 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   2 2
No Yes Persephonella marina EX-H1   1 1
No Yes Thermodesulfovibrio yellowstonii DSM 11347   2 2
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes Ilyobacter polytropus DSM 2926   3 3
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 53993   1 1
No Yes Nautilia profundicola AmH   1 1
No Yes Sulfurospirillum deleyianum DSM 6946   1 1
No Yes Sulfurospirillum barnesii SES-3   1 1
No Yes Arcobacter sp. L   1 1
No Yes Campylobacter hominis ATCC BAA-381   1 1
No Yes Campylobacter curvus 525.92   2 2
No Yes Campylobacter concisus 13826   2 2
No Yes Campylobacter sp. 03-427   1 1
No Yes Campylobacter fetus subsp. fetus 82-40   1 1
No Yes Wolinella succinogenes DSM 1740   1 1
No Yes Desulfarculus baarsii DSM 2075   3 3
No Yes Desulfobacca acetoxidans DSM 11109   5 5
No Yes Syntrophus aciditrophicus SB   2 2
No Yes Desulfomonile tiedjei DSM 6799   3 3
No Yes Syntrophobacter fumaroxidans MPOB   4 4
No Yes Desulfurivibrio alkaliphilus AHT2   4 4
No Yes Desulfotalea psychrophila LSv54   3 3
No Yes Desulfobulbus propionicus DSM 2032   2 2
No Yes Desulfatibacillum alkenivorans AK-01   7 7
No Yes Desulfobacterium autotrophicum HRM2   7 7
No Yes Desulfococcus oleovorans Hxd3   5 5
No Yes Desulfohalobium retbaense DSM 5692   2 2
No Yes Desulfomicrobium baculatum DSM 4028   4 4
No Yes Desulfovibrio piezophilus   3 3
No Yes Desulfovibrio aespoeensis Aspo-2   2 2
No Yes Lawsonia intracellularis PHE/MN1-00   1 1
No Yes Desulfovibrio magneticus RS-1   2 2
No Yes Desulfovibrio alaskensis G20   2 2
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   2 2
No Yes Desulfovibrio salexigens DSM 2638   2 2
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   2 2
No Yes Desulfovibrio africanus str. Walvis Bay   3 3
No Yes Hippea maritima DSM 10411   1 1
No Yes Geobacter daltonii FRC-32   4 4
No Yes Geobacter sp. M21   3 3
No Yes Geobacter uraniireducens Rf4   3 3
No Yes Geobacter lovleyi SZ   3 3
No Yes Geobacter bemidjiensis Bem   5 5
No Yes Geobacter sulfurreducens KN400   1 1
No Yes Geobacter metallireducens GS-15   2 2
No Yes Pelobacter propionicus DSM 2379   3 3
No Yes Pelobacter carbinolicus DSM 2380   4 4
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Magnetococcus marinus MC-1   1 1
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   1 1
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Rhodospirillum rubrum F11   2 2
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Methylocystis sp. SC2   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   1 1
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Photobacterium profundum SS9   2 2
No Yes Psychromonas sp. CNPT3   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Thiocystis violascens DSM 198   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Cycloclasticus sp. P1   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Pyrolobus fumarii 1A   1 1
No Yes Ignicoccus hospitalis KIN4/I   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Methanocella arvoryzae MRE50   3 3
No Yes Methanocella conradii HZ254   1 1
No Yes Methanocella paludicola SANAE   1 1
No Yes Methanosaeta harundinacea 6Ac   5 5
No Yes Methanosaeta thermophila PT   4 4
No Yes Methanosaeta concilii GP6   5 5
No Yes Methanosalsum zhilinae DSM 4017   4 4
No Yes Methanohalobium evestigatum Z-7303   3 3
No Yes Methanococcoides burtonii DSM 6242   4 4
No Yes Methanosarcina acetivorans C2A   7 7
No Yes Methanosarcina mazei Go1   7 7
No Yes Methanosarcina barkeri str. Fusaro   6 6
No Yes Methanohalophilus mahii DSM 5219   4 4
No Yes Methanosphaerula palustris E1-9c   3 3
No Yes Methanoregula boonei 6A8   5 5
No Yes Methanospirillum hungatei JF-1   4 4
No Yes Methanocorpusculum labreanum Z   2 2
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   3 3
No Yes Methanopyrus kandleri AV19   4 4
No Yes Ferroglobus placidus DSM 10642   5 5
No Yes Archaeoglobus veneficus SNP6   2 2
No Yes Archaeoglobus fulgidus DSM 4304   4 4
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   2 2
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   2 2
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   2 2
No Yes Thermoplasmatales archaeon BRNA1   1 1
No Yes Halorhabdus utahensis DSM 12940   1 1
No Yes Methanotorris igneus Kol 5   6 6
No Yes Methanocaldococcus sp. FS406-22   5 5
No Yes Methanocaldococcus fervens AG86   3 3
No Yes Methanocaldococcus vulcanius M7   6 6
No Yes methanocaldococcus infernus ME   4 4
No Yes Methanocaldococcus jannaschii DSM 2661   6 6
No Yes Methanothermococcus okinawensis IH1   5 5
No Yes Methanococcus aeolicus Nankai-3   4 4
No Yes Methanococcus maripaludis C5   2 2
No Yes Methanococcus voltae A3   1 1
No Yes Methanococcus vannielii SB   3 3
No Yes Methanothermus fervidus DSM 2088   2 2
No Yes Methanothermobacter marburgensis str. Marburg   6 6
No Yes Methanothermobacter thermautotrophicus str. Delta H   3 3
No Yes Methanosphaera stadtmanae DSM 3091   1 1
No Yes Methanobrevibacter sp. AbM4   1 1
No Yes Methanobrevibacter ruminantium M1   1 1
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   3 3
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 3 3
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 2 2
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   2 2
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   1 1
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Dehalococcoides mccartyi GY50   1 1
No Yes Dehalococcoides mccartyi DCMB5   1 1
No Yes Dehalococcoides mccartyi BTF08   1 1
No Yes Dehalococcoides sp. GT   1 1
No Yes Dehalococcoides sp. VS   1 1
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium thermocellum DSM 1313   2 2
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   2 2
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Clostridium acidurici 9a   3 3
No Yes Desulfosporosinus meridiei DSM 13257   9 9
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   5 5
No Yes Desulfitobacterium hafniense DCB-2   7 7
No Yes Desulfotomaculum gibsoniae DSM 7213   9 9
No Yes Clostridium difficile BI1   4 4
No Yes Clostridium difficile R20291   4 4
No Yes Clostridium difficile CD196   4 4
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Coprococcus catus GD/7   1 1
No Yes Roseburia intestinalis XB6B4   2 2
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium saccharobutylicum DSM 13864   4 4
No Yes Clostridium autoethanogenum DSM 10061   7 7
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   7 7
No Yes Clostridium kluyveri NBRC 12016   3 3
No Yes Clostridium tetani genome 12124569   2 2
No Yes Clostridium perfringens SM101   3 3
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium pasteurianum BC1   6 6
No Yes Clostridium botulinum H04402 065   3 3
No Yes Clostridium botulinum BKT015925   2 2
No Yes Clostridium botulinum F str. 230613   2 2
No Yes Clostridium botulinum F str. Langeland   3 3
No Yes Clostridium botulinum E3 str. Alaska E43   2 2
No Yes Clostridium botulinum B1 str. Okra   3 3
No Yes Clostridium botulinum Ba4 str. 657   3 3
No Yes Clostridium botulinum A2 str. Kyoto   3 3
No Yes Clostridium botulinum A3 str. Loch Maree   3 3
No Yes Clostridium botulinum A str. Hall   2 2
No Yes Clostridium botulinum A str. ATCC 19397   3 3
No Yes Clostridium acetobutylicum DSM 1731   4 4
No Yes Clostridium acetobutylicum EA 2018   4 4
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Thermacetogenium phaeum DSM 12270   5 5
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Halobacteroides halobius DSM 5150   3 3
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Prevotella sp. oral taxon 299 str. F0039   1 1
No Yes Porphyromonas gingivalis TDC60   1 1
No Yes Porphyromonas gingivalis W83   1 1
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Spirochaeta thermophila DSM 6578   1 1
No Yes Thermotoga maritima MSB8   1 1
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   1 1
No Yes Fusobacterium nucleatum subsp. animalis 4_8   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   5 5
No Yes Desulfobacula toluolica Tol2   7 7
No Yes Lawsonia intracellularis N343   1 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   2 2
No Yes Desulfovibrio vulgaris RCH1   3 3
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   2 2
No Yes Desulfovibrio vulgaris str. Hildenborough   3 3
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   1 1
No Yes Desulfovibrio desulfuricans ND132   2 2
No Yes Geobacter sp. M18   2 2
No Yes Geobacter sulfurreducens PCA   2 2
No Yes Sorangium cellulosum So0157-2   3 3
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   1 1
No Yes Zymomonas mobilis subsp. mobilis CP4   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   1 1
No Yes Zymomonas mobilis subsp. mobilis ZM4   1 1
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Rhodospirillum rubrum ATCC 11170   2 2
No Yes Rhodopseudomonas palustris BisB18   2 2
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Mannheimia succiniciproducens MBEL55E   1 1
No Yes Actinobacillus suis H91-0380   1 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   1 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Thioflavicoccus mobilis 8321   2 2
No Yes Proteus mirabilis BB2000   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Methanomethylovorans hollandica DSM 15978   5 5
No Yes Methanolobus psychrophilus R15   5 5
No Yes Methanosarcina mazei Tuc01   5 5
No Yes Methanoregula formicica Methanoregula formicicum SMSP   4 4
No Yes Archaeoglobus sulfaticallidus PM70-1   4 4
No Yes Thermococcus sp. AM4   2 2
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   2 2
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   2 2
No Yes Natronococcus occultus SP4   1 1
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Methanococcus maripaludis X1   3 3
No Yes Methanococcus maripaludis C6   3 3
No Yes Methanococcus maripaludis C7   2 2
No Yes Methanococcus maripaludis S2   3 3
No Yes Methanobacterium sp. SWAN-1   4 4
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 2 2
No Yes Ricinus communis (Early assembly) Castor bean 2 2
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 2
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 2 2
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1 1
No Yes Danio rerio 69_9 Zebrafish 14 2
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   3 3
No Yes 4_050719Q (meta-genome)   5 5
No Yes 5_050719P (meta-genome)   5 5
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   12 12
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   13 13
No Yes Bath Hot Springs, filamentous community (meta-genome)   4 4
No Yes Bath Hot Springs, planktonic community (meta-genome)   7 7
No Yes Combined (meta-genome)   18 18
No Yes Core Eukaryotic Genes 458 (CEGMA)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   15 15
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   6 6
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   11 11
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   8 8
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   12 12
No Yes Fungus garden combined (combined) (meta-genome)   10 10
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   32 32
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   29 29
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   25 25
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   12 12
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   70 70
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   21 21
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   17 17
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   42 42
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   19 19
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   3 3
No Yes Human Gut Community Subject 7 (meta-genome)   7 7
No Yes Human Gut Community Subject 8 (meta-genome)   20 20
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   24 24
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   39 39
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   12 12
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   16 16
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   3 3
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   36195 36003
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   7 7
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   3 3
No Yes Protozoadb 2010_08 (Protozoadb)   12 12
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   53 53
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   27 27
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   29 29
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   128 128
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   41 41
No Yes STRING v9.0.5 (STRING)   596 595
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   5 5
No Yes Termite Protist Endosymbiont Community (meta-genome)   5 5
No Yes Uniprot 2018_03 genome   10244 10193
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   72 72
No Yes Global Ocean Sampling Expedition (GOS)   30 30
No Yes NCBI plasmid sequences (Plasmids)   9 9
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   10 10
No Yes Protein Data Bank (all PDB sequenc)   115 115
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   683 683
No Yes TargetDB (Targets)   15 15
No Yes The Salmonella enterica Pan-genome (meta-genome)   31 31

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