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Leukocidin-like superfamily domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 73 significant domains in 73 proteins.

Showing genomes 1 to 25 of 138
  1 2 3 4 5 6   Next Last

Segniliparus rotundus DSM 44985 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|296392534|ref|YP_003657418.1|   0.00000000019   62-136,163-258   Porin MspA  
gi|296394015|ref|YP_003658899.1|   0.00000000049   41-205   Porin MspA  
 
Weak hits:
gi|296393684|ref|YP_003658568.1|   0.049   48-124   Porin MspA  

Tsukamurella paurometabola DSM 20162 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|296138041|ref|YP_003645284.1|   0.0000157   61-164   Porin MspA  
  0.0229   174-279   Porin MspA  
gi|296138446|ref|YP_003645689.1|   0.0000000105   50-261   Porin MspA  
gi|296140962|ref|YP_003648205.1|   0.0000915   37-146   Porin MspA  
 
Weak hits:
gi|296139225|ref|YP_003646468.1|   0.000432   48-177   Porin MspA  
gi|296140960|ref|YP_003648203.1|   0.0216   53-225   Porin MspA  
gi|296140961|ref|YP_003648204.1|   0.0654   67-228   Porin MspA  
gi|296141168|ref|YP_003648411.1|   0.0314   43-218   Porin MspA  
gi|296141227|ref|YP_003648470.1|   0.0163   55-212   Porin MspA  
gi|296141501|ref|YP_003648744.1|   0.0163   55-212   Porin MspA  
gi|296141753|ref|YP_003648996.1|   0.000719   217-280   Porin MspA  

Gordonia sp. KTR9 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|404213916|ref|YP_006668110.1|   0.00000000575   47-213   Porin MspA  
gi|404214439|ref|YP_006668634.1|   0.000000118   39-204   Porin MspA  
gi|404217517|ref|YP_006671784.1|   0.000000000000036   35-204   Porin MspA  
gi|404217518|ref|YP_006671785.1|   0.0000000386   39-199   Porin MspA  
 
Weak hits:
gi|404212927|ref|YP_006667102.1|   0.00111   63-232   Porin MspA  

Gordonia polyisoprenivorans VH2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|378716778|ref|YP_005281667.1|   0.0000981   47-203   Porin MspA  
 
Weak hits:
gi|378716981|ref|YP_005281870.1|   0.00242   111-212   Porin MspA  
gi|378716982|ref|YP_005281871.1|   0.085   44-215   Porin MspA  

Gordonia bronchialis DSM 43247 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|262201368|ref|YP_003272576.1|   0.0000719   58-187   Porin MspA  
gi|262201369|ref|YP_003272577.1|   0.00000000392   46-205   Porin MspA  
 
Weak hits:
gi|262204188|ref|YP_003275396.1|   0.0209   121-234   Porin MspA  
gi|262204443|ref|YP_003275651.1|   0.0327   105-224   Porin MspA  

Rhodococcus jostii RHA1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|111020116|ref|YP_703088.1|   4.9e-22   39-232   Porin MspA  
gi|111020145|ref|YP_703117.1|   0.000000000053   111-280   Porin MspA  
gi|111021057|ref|YP_704029.1|   3.47e-21   39-232   Porin MspA  
gi|111025343|ref|YP_707763.1|   1.05e-22   39-232   Porin MspA  
 
Weak hits:
gi|111022593|ref|YP_705565.1|   0.0556   48-219   Porin MspA  

Rhodococcus equi 103S has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|312138624|ref|YP_004005960.1|   3.2e-17   49-246   Porin MspA  

Rhodococcus opacus B4 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|226359836|ref|YP_002777614.1|   1.18e-22   39-234   Porin MspA  
gi|226363359|ref|YP_002781141.1|   7.85e-22   39-232   Porin MspA  
 
Weak hits:
gi|226362280|ref|YP_002780058.1|   0.000209   50-228   Porin MspA  
gi|226362428|ref|YP_002780206.1|   0.000981   48-218   Porin MspA  
gi|226365099|ref|YP_002782882.1|   0.000719   51-231   Porin MspA  
gi|226365101|ref|YP_002782884.1|   0.0392   66-231   Porin MspA  

Rhodococcus erythropolis PR4 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|226303719|ref|YP_002763677.1|   1.7e-20   36-227   Porin MspA  
gi|226303755|ref|YP_002763713.1|   4.58e-20   47-224   Porin MspA  
gi|226303764|ref|YP_002763722.1|   8.5e-20   48-224   Porin MspA  

Nocardia farcinica IFM 10152 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|54022868|ref|YP_117110.1|   0.0000915   34-194   Porin MspA  

Mycobacterium massiliense str. GO 06 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|397678815|ref|YP_006520350.1|   3.2e-66   38-222   Porin MspA  
gi|397678816|ref|YP_006520351.1|   5.49e-66   37-221   Porin MspA  

Mycobacterium abscessus ATCC 19977 has 8 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|169627835|ref|YP_001701484.1|   0.000000000000915   41-210   Porin MspA  
gi|169628175|ref|YP_001701824.1|   4.12e-65   38-222   Porin MspA  
gi|169628176|ref|YP_001701825.1|   8.5e-65   37-221   Porin MspA  
gi|169628414|ref|YP_001702063.1|   0.0000000000647   38-202   Porin MspA  
gi|169629415|ref|YP_001703064.1|   0.0000000000347   39-200   Porin MspA  
gi|169629883|ref|YP_001703532.1|   6.54e-30   56-227   Porin MspA  
gi|169629884|ref|YP_001703533.1|   3.79e-33   73-244   Porin MspA  
gi|169630236|ref|YP_001703885.1|   0.000000000144   38-201   Porin MspA  
 
Weak hits:
gi|169628979|ref|YP_001702628.1|   0.000157   44-243   Porin MspA  

Mycobacterium sp. JLS has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|126436419|ref|YP_001072110.1|   7.19e-44   47-234   Porin MspA  
gi|126437239|ref|YP_001072930.1|   3.33e-79   28-216   Porin MspA  
gi|126437240|ref|YP_001072931.1|   4.84e-77   28-216   Porin MspA  
gi|126437242|ref|YP_001072933.1|   3.99e-78   28-216   Porin MspA  

Mycobacterium intracellulare ATCC 13950 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|379748498|ref|YP_005339319.1|   2.35e-60   31-214   Porin MspA  

Mycobacterium avium 104 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118464476|ref|YP_883104.1|   1.96e-77   45-226   Porin MspA  

Mycobacterium vanbaalenii PYR-1 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|120402834|ref|YP_952663.1|   4.18e-77   28-209   Porin MspA  
gi|120405071|ref|YP_954900.1|   1.9e-41   53-237   Porin MspA  
gi|120405789|ref|YP_955618.1|   1.11e-77   28-209   Porin MspA  
gi|120405790|ref|YP_955619.1|   9.15e-78   28-209   Porin MspA  
gi|120405965|ref|YP_955794.1|   3.66e-33   64-237   Porin MspA  
gi|120405966|ref|YP_955795.1|   9.15e-32   51-226   Porin MspA  
gi|120406710|ref|YP_956539.1|   0.00000000000654   41-206   Porin MspA  

Mycobacterium rhodesiae NBB3 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|375140433|ref|YP_005001082.1|   7.85e-80   32-229   Porin MspA  
gi|375140934|ref|YP_005001583.1|   6.54e-44   63-249   Porin MspA  
gi|375141435|ref|YP_005002084.1|   7.85e-81   28-225   Porin MspA  

Mycobacterium ulcerans Agy99 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118617888|ref|YP_906220.1|   6.54e-48   50-232   Porin MspA  

Mycobacterium gilvum PYR-GCK has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|145222324|ref|YP_001133002.1|   3.79e-28   51-224   Porin MspA  
gi|145222325|ref|YP_001133003.1|   1.83e-35   53-225   Porin MspA  
gi|145222481|ref|YP_001133159.1|   7.85e-77   28-217   Porin MspA  
gi|145222883|ref|YP_001133561.1|   3.66e-37   65-248   Porin MspA  

Mycobacterium chubuense NBB4 has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|392414618|ref|YP_006451223.1|   8.5e-56   49-227   Porin MspA  
gi|392414652|ref|YP_006451257.1|   1.11e-31   50-226   Porin MspA  
gi|392414653|ref|YP_006451258.1|   1.63e-26   49-225   Porin MspA  
gi|392415214|ref|YP_006451819.1|   1.05e-77   28-213   Porin MspA  
gi|392416084|ref|YP_006452689.1|   1.57e-75   29-215   Porin MspA  
gi|392416103|ref|YP_006452708.1|   3.33e-32   44-221   Porin MspA  
gi|392416104|ref|YP_006452709.1|   3.6e-24   63-238   Porin MspA  
gi|392418022|ref|YP_006454627.1|   2.22e-74   28-215   Porin MspA  
gi|392418023|ref|YP_006454628.1|   3.27e-75   28-215   Porin MspA  
gi|392418024|ref|YP_006454629.1|   6.15e-76   43-228   Porin MspA  

Mycobacterium marinum M has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|183981557|ref|YP_001849848.1|   2.42e-49   49-231   Porin MspA  

Mycobacterium smegmatis str. MC2 155 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118470270|ref|YP_890279.1|   1.96e-86   25-207   Porin MspA  
gi|118471254|ref|YP_884932.1|   3.2e-92   32-215   Porin MspA  
gi|118472180|ref|YP_885367.1|   1.44e-92   28-211   Porin MspA  
gi|118472793|ref|YP_889721.1|   3.2e-92   32-215   Porin MspA  

Bacillus thuringiensis str. Al Hakam has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118477929|ref|YP_895080.1|   2.13e-91   40-331   Leukocidin (pore-forming toxin)  

Bacillus cereus 03BB102 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|225864510|ref|YP_002749888.1|   2.13e-91   36-327   Leukocidin (pore-forming toxin)  

Staphylococcus pseudintermedius HKU10-03 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|319892855|ref|YP_004149730.1|   2.13e-105   33-310   Leukocidin (pore-forming toxin)  
gi|319892856|ref|YP_004149731.1|   6.54e-124   28-325   Leukocidin (pore-forming toxin)  

  1 2 3 4 5 6   Next Last
Showing genomes 1 to 25 of 138

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Select to display   Genome       Domains   Proteins
No Yes ALL   86454 86454
No Yes Aspergillus zonatus v1.0   8 6
No Yes Segniliparus rotundus DSM 44985   2 2
No Yes Tsukamurella paurometabola DSM 20162   3 3
No Yes Gordonia sp. KTR9   4 4
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   4 4
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   3 3
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium massiliense str. GO 06   2 2
No Yes Mycobacterium abscessus ATCC 19977   8 8
No Yes Mycobacterium sp. JLS   4 4
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium vanbaalenii PYR-1   7 7
No Yes Mycobacterium rhodesiae NBB3   3 3
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium gilvum PYR-GCK   4 4
No Yes Mycobacterium chubuense NBB4   10 10
No Yes Mycobacterium marinum M   1 1
No Yes Mycobacterium smegmatis str. MC2 155   4 4
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   2 2
No Yes Staphylococcus aureus subsp. aureus JH1   8 8
No Yes Staphylococcus aureus   6 6
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio sp. Ex25   2 2
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Rhodococcus pyridinivorans SB3094   4 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   7 6
No Yes Mycobacterium sp. MOTT36Y   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   10 10
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium sp. KMS   3 3
No Yes Mycobacterium sp. MCS   3 3
No Yes Mycobacterium yongonense 05-1390   1 1
No Yes Mycobacterium intracellulare MOTT-64   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium gilvum Spyr1   4 4
No Yes Mycobacterium smegmatis str. MC2 155   4 4
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Corynebacterium terpenotabidum Y-11   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus thuringiensis HD-789   3 3
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   2 2
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   2 2
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   2 2
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   2 2
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   2 2
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus E33L   2 2
No Yes Bacillus cereus ATCC 14579   2 2
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   2 2
No Yes Bacillus anthracis str. CDC 684   2 2
No Yes Staphylococcus aureus subsp. aureus MSHR1132   7 7
No Yes Staphylococcus pseudintermedius ED99   2 2
No Yes Staphylococcus aureus CA-347   6 6
No Yes Staphylococcus aureus Bmb9393   8 8
No Yes Staphylococcus aureus M1   8 8
No Yes Staphylococcus aureus 08BA02176   6 6
No Yes Staphylococcus aureus ST228/18412   6 6
No Yes Staphylococcus aureus ST228/18341   6 6
No Yes Staphylococcus aureus ST228/16125   6 6
No Yes Staphylococcus aureus ST228/16035   6 6
No Yes Staphylococcus aureus ST228/15532   6 6
No Yes Staphylococcus aureus ST228/10497   6 6
No Yes Staphylococcus aureus ST228/10388   6 6
No Yes Staphylococcus aureus 04-02981   8 8
No Yes Staphylococcus aureus RF122   10 10
No Yes Staphylococcus aureus subsp. aureus Z172   8 8
No Yes Staphylococcus aureus subsp. aureus 6850   8 8
No Yes Staphylococcus aureus subsp. aureus SA957   8 8
No Yes Staphylococcus aureus subsp. aureus CN1   8 8
No Yes Staphylococcus aureus subsp. aureus SA40   6 6
No Yes Staphylococcus aureus subsp. aureus 11819-97   10 10
No Yes Staphylococcus aureus subsp. aureus M013   8 8
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   6 6
No Yes Staphylococcus aureus subsp. aureus VC40   8 8
No Yes Staphylococcus aureus subsp. aureus T0131   8 8
No Yes Staphylococcus aureus subsp. aureus LGA251   6 6
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   8 8
No Yes Staphylococcus aureus subsp. aureus JKD6159   10 10
No Yes Staphylococcus aureus subsp. aureus ED133   9 9
No Yes Staphylococcus aureus subsp. aureus ED98   8 8
No Yes Staphylococcus aureus subsp. aureus TW20   8 8
No Yes Staphylococcus aureus subsp. aureus 55/2053   8 8
No Yes Staphylococcus aureus subsp. aureus TCH60   8 8
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   6 6
No Yes Staphylococcus aureus subsp. aureus 71193   6 6
No Yes Staphylococcus aureus subsp. aureus S0385   6 6
No Yes Staphylococcus aureus subsp. aureus str. Newman   8 8
No Yes Staphylococcus aureus subsp. aureus Mu3   8 8
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   10 10
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   10 10
No Yes Staphylococcus aureus subsp. aureus JH9   8 8
No Yes Staphylococcus aureus subsp. aureus MSSA476   8 8
No Yes Staphylococcus aureus subsp. aureus MRSA252   5 5
No Yes Staphylococcus aureus subsp. aureus MW2   10 10
No Yes Staphylococcus aureus subsp. aureus N315   8 8
No Yes Staphylococcus aureus subsp. aureus Mu50   8 8
No Yes Staphylococcus aureus subsp. aureus COL   8 8
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   8 8
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   81862 81820
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   205 205
No Yes Uniprot 2018_03 genome   2926 2907
No Yes Global Ocean Sampling Expedition (GOS)   4 4
No Yes NCBI plasmid sequences (Plasmids)   9 9
No Yes NCBI viral sequences (Viral)   19 19
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   194 194
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   503 503
No Yes TargetDB (Targets)   7 7
No Yes UniProt viral sequences (Viral)   15 15

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