SUPERFAMILY 1.75 HMM library and genome assignments server

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Lipovitellin-phosvitin complex; beta-sheet shell regions family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   2439 2439
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 1
No Yes Ornithorhynchus anatinus 76_5 Platypus 3 2
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Meleagris gallopavo 76_2 Turkey 17 6
No Yes Gallus gallus 76_4 Chicken 8 3
No Yes Anas platyrhynchos 76_1.0 Mallard 5 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 6 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 11 4
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 3 2
No Yes Anolis carolinensis 76_2.0 Green anole 2 1
No Yes Xenopus laevis African clawed frog 18 8
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 6 3
No Yes Latimeria chalumnae 76_1 Coelacanth 11 4
No Yes Lepisosteus oculatus 76 Spotted gar 8 3
No Yes Gadus morhua 76_1 Atlantic cod 25 13
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 14 7
No Yes Takifugu rubripes 76_4 Torafugu 16 7
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 9 6
No Yes Oryzias latipes 76_1 Japanese medaka 9 5
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 6 3
No Yes Astyanax mexicanus 76 Mexican tetra 4 2
No Yes Danio rerio 76_9 Zebrafish 22 12
No Yes Trichoplax adhaerens   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 4 2
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 3 2
No Yes Meleagris gallopavo 69_2 Turkey 9 3
No Yes Gallus gallus 69_2 Chicken 11 4
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 6 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 3 2
No Yes Anolis carolinensis 69_2.0 Green anole 2 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 6 3
No Yes Latimeria chalumnae 69_1 Coelacanth 8 3
No Yes Gadus morhua 69_1 Atlantic cod 7 4
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 3 2
No Yes Takifugu rubripes 69_4 Torafugu 3 2
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 5 3
No Yes Oryzias latipes 69_1 Japanese medaka 9 5
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 6 3
No Yes Danio rerio 69_9 Zebrafish 16 8
No Yes NCBI 2017_08 genome   1000 440
No Yes STRING v9.0.5 (STRING)   54 29
No Yes Uniprot 2018_03 genome   895 446
No Yes PDB chains (SCOP 1.75) (PDB)   3 2
No Yes Protein Data Bank (all PDB sequenc)   3 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   10 10

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