SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Hairpin loop containing domain-like superfamily domain assignments
in
all genomes

Assignment details

(show help)

25 selected genomes have 108 significant domains in 108 proteins.

Showing genomes 1 to 25 of 418
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Homo sapiens 76_38 has 18 significant domains in 18 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000222390   2.35e-23   36-125   Hairpin loop containing domain  
ENSP00000308938   1.02e-20   19-100   Hairpin loop containing domain  
ENSP00000346164   1.86e-24   36-125   Hairpin loop containing domain  
ENSP00000347933   5.49e-20   19-96   Hairpin loop containing domain  
ENSP00000352458   5.49e-20   19-96   Hairpin loop containing domain  
ENSP00000355891   3.45e-22   19-100   Hairpin loop containing domain  
ENSP00000384957   0.0000137   309-359   Pan module (APPLE domain)  
ENSP00000386317   5.49e-20   19-96   Hairpin loop containing domain  
ENSP00000386505   5.49e-20   19-96   Hairpin loop containing domain  
ENSP00000386975   5.49e-20   19-96   Hairpin loop containing domain  
ENSP00000387083   0.00000000745   19-65   Hairpin loop containing domain  
ENSP00000388592   1.02e-20   36-118   Hairpin loop containing domain  
ENSP00000389424   8.63e-17   19-117   Hairpin loop containing domain  
ENSP00000389854   5.3e-24   36-125   Hairpin loop containing domain  
ENSP00000391238   2.35e-23   36-125   Hairpin loop containing domain  
ENSP00000396307   1.8e-24   36-125   Hairpin loop containing domain  
ENSP00000408270   5.1e-24   36-125   Hairpin loop containing domain  
ENSP00000413829   2.55e-24   36-125   Hairpin loop containing domain  
ENSP00000414287   1.33e-17   34-121   Hairpin loop containing domain  
 
Weak hits:
ENSP00000264690   0.00104   127-154   Pan module (APPLE domain)  
  0.00628   299-341   Pan module (APPLE domain)  
  0.0106   222-261   Pan module (APPLE domain)  
  0.0135   41-64   Pan module (APPLE domain)  
ENSP00000264692   0.00726   244-281   Pan module (APPLE domain)  
  0.0141   30-63   Pan module (APPLE domain)  
  0.0194   167-190   Pan module (APPLE domain)  
ENSP00000392231   0.00294   4-26   Pan module (APPLE domain)  
ENSP00000397401   0.00392   114-151   Pan module (APPLE domain)  
  0.0129   37-60   Pan module (APPLE domain)  
ENSP00000406891   0.0306   4-48   Anti-platelet protein  
ENSP00000407650   0.0322   4-49   Anti-platelet protein  
ENSP00000412366   0.00135   40-64   Pan module (APPLE domain)  
  0.0294   123-147   Hairpin loop containing domain  
ENSP00000415563   0.000184   89-116   Pan module (APPLE domain)  
  0.00981   4-26   Pan module (APPLE domain)  
ENSP00000424469   0.000863   127-154   Pan module (APPLE domain)  
  0.0053   299-341   Pan module (APPLE domain)  
  0.0112   41-64   Pan module (APPLE domain)  
  0.0173   222-262   Pan module (APPLE domain)  
ENSP00000424479   0.000216   129-154   Pan module (APPLE domain)  
  0.00275   30-64   Pan module (APPLE domain)  
ENSP00000426629   0.00114   175-202   Pan module (APPLE domain)  
  0.00706   347-389   Pan module (APPLE domain)  
  0.0116   270-309   Pan module (APPLE domain)  
  0.0129   89-112   Pan module (APPLE domain)  
ENSP00000446744   0.0863   81-114   Anti-platelet protein  
ENSP00000484139   0.029   42-61   Pan module (APPLE domain)  

Pan troglodytes 76_2.1.4 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000020863   5.3e-21   19-96   Hairpin loop containing domain  
ENSPTRP00000032051   4.71e-21   19-100   Hairpin loop containing domain  
ENSPTRP00000033097   2.35e-23   36-125   Hairpin loop containing domain  
ENSPTRP00000051376   2.16e-16   20-104   Hairpin loop containing domain  
 
Weak hits:
ENSPTRP00000028578   0.00049   129-155   Pan module (APPLE domain)  
  0.00569   28-63   Pan module (APPLE domain)  
  0.0216   221-244   Pan module (APPLE domain)  
  0.0235   298-335   Pan module (APPLE domain)  

Gorilla gorilla 76_3.1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000003376   2.35e-23   36-125   Hairpin loop containing domain  
ENSGGOP00000010048   3.49e-20   19-99   Hairpin loop containing domain  
ENSGGOP00000010331   1.69e-16   34-119   Hairpin loop containing domain  
ENSGGOP00000020493   2.16e-16   2-86   Hairpin loop containing domain  
 
Weak hits:
ENSGGOP00000009583   0.00049   129-155   Pan module (APPLE domain)  
  0.0147   221-245   Hairpin loop containing domain  
  0.0169   30-63   Pan module (APPLE domain)  
ENSGGOP00000021116   0.000412   127-154   Pan module (APPLE domain)  
  0.00412   299-341   Pan module (APPLE domain)  
  0.012   222-262   Pan module (APPLE domain)  
  0.0122   41-64   Pan module (APPLE domain)  

Pongo abelii 76_2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000015516   1.9e-17   34-121   Hairpin loop containing domain  
ENSPPYP00000019211   3.73e-21   19-100   Hairpin loop containing domain  
ENSPPYP00000020015   2.35e-23   36-125   Hairpin loop containing domain  
ENSPPYP00000024703   3.77e-21   19-100   Hairpin loop containing domain  
 
Weak hits:
ENSPPYP00000017045   0.00108   740-767   Pan module (APPLE domain)  
  0.0145   915-957   Pan module (APPLE domain)  
  0.0147   654-677   Pan module (APPLE domain)  
  0.0981   835-859   Pan module (APPLE domain)  
ENSPPYP00000017048   0.000549   130-154   Pan module (APPLE domain)  
  0.00432   298-335   Pan module (APPLE domain)  
  0.0131   221-244   Pan module (APPLE domain)  
  0.0188   30-63   Pan module (APPLE domain)  

Nomascus leucogenys 76_1.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000008372   1.45e-17   34-121   Hairpin loop containing domain  
ENSNLEP00000013885   1.1e-20   19-100   Hairpin loop containing domain  
ENSNLEP00000017995   2.35e-23   36-125   Hairpin loop containing domain  
ENSNLEP00000023996   2.75e-23   120-209   Hairpin loop containing domain  
 
Weak hits:
ENSNLEP00000014028   0.000706   127-154   Pan module (APPLE domain)  
  0.00726   299-341   Pan module (APPLE domain)  
  0.00824   41-64   Hairpin loop containing domain  
  0.051   221-262   Pan module (APPLE domain)  
ENSNLEP00000014056   0.000549   129-154   Pan module (APPLE domain)  
  0.0128   221-244   Pan module (APPLE domain)  
  0.0155   30-63   Pan module (APPLE domain)  
  0.0167   298-336   Pan module (APPLE domain)  

Papio anubis 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000002280   6.28e-23   96-185   Hairpin loop containing domain  
ENSPANP00000015457   2.94e-16   34-121   Hairpin loop containing domain  
ENSPANP00000018664   2.08e-21   19-100   Hairpin loop containing domain  
 
Weak hits:
ENSPANP00000002951   0.000451   127-154   Pan module (APPLE domain)  
  0.00314   301-343   Pan module (APPLE domain)  
  0.00726   41-64   Pan module (APPLE domain)  
  0.0184   222-246   Pan module (APPLE domain)  
ENSPANP00000010436   0.000785   130-155   Pan module (APPLE domain)  
  0.00334   27-64   Pan module (APPLE domain)  
  0.0137   221-244   Pan module (APPLE domain)  
  0.0196   298-339   Pan module (APPLE domain)  

Macaca mulatta 76_1 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000019112   2.75e-16   20-107   Hairpin loop containing domain  
ENSMMUP00000019125   0.00000000000549   18-80   Hairpin loop containing domain  
ENSMMUP00000022281   3.92e-21   19-100   Hairpin loop containing domain  
ENSMMUP00000024540   5.49e-23   36-125   Hairpin loop containing domain  
ENSMMUP00000024541   1.16e-23   36-125   Hairpin loop containing domain  
 
Weak hits:
ENSMMUP00000015266   0.000451   135-162   Pan module (APPLE domain)  
  0.00314   307-349   Pan module (APPLE domain)  
  0.00667   49-72   Pan module (APPLE domain)  
  0.0726   230-268   Pan module (APPLE domain)  
ENSMMUP00000015267   0.000804   112-137   Pan module (APPLE domain)  
  0.00133   9-47   Pan module (APPLE domain)  
  0.0373   203-226   Pan module (APPLE domain)  
ENSMMUP00000015268   0.00228   9-47   Pan module (APPLE domain)  
  0.033   151-174   Pan module (APPLE domain)  

Callithrix jacchus 76_3.2.1 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000006078   9.02e-24   36-125   Hairpin loop containing domain  
ENSCJAP00000006156   2.16e-23   36-125   Hairpin loop containing domain  
ENSCJAP00000007513   1.29e-16   34-121   Hairpin loop containing domain  
ENSCJAP00000022305   3.37e-20   19-100   Hairpin loop containing domain  
ENSCJAP00000044211   0.00000000000000353   19-82   Hairpin loop containing domain  
ENSCJAP00000044294   0.000000863   7-46   Hairpin loop containing domain  
ENSCJAP00000046724   3.18e-24   36-125   Hairpin loop containing domain  
 
Weak hits:
ENSCJAP00000037707   0.000471   89-116   Pan module (APPLE domain)  
  0.00412   261-303   Pan module (APPLE domain)  
  0.0112   4-26   Pan module (APPLE domain)  
  0.0151   184-207   Anti-platelet protein  
ENSCJAP00000037718   0.000628   127-154   Pan module (APPLE domain)  
  0.00726   299-341   Pan module (APPLE domain)  
  0.00765   41-64   Pan module (APPLE domain)  
  0.0196   222-245   Anti-platelet protein  
ENSCJAP00000037732   0.00765   29-64   Pan module (APPLE domain)  
  0.00942   244-285   Pan module (APPLE domain)  
  0.0133   167-190   Pan module (APPLE domain)  
ENSCJAP00000049318   0.000726   130-154   Pan module (APPLE domain)  
  0.00863   29-64   Pan module (APPLE domain)  
  0.0108   299-339   Pan module (APPLE domain)  
  0.0151   221-244   Pan module (APPLE domain)  

Otolemur garnettii 76_3 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000001800   0.000053   127-154   Pan module (APPLE domain)  
  0.00647   298-340   Pan module (APPLE domain)  
  0.0192   222-261   Pan module (APPLE domain)  
ENSOGAP00000005362   1.33e-21   36-125   Hairpin loop containing domain  
ENSOGAP00000010555   4.51e-16   20-107   Hairpin loop containing domain  
ENSOGAP00000018878   5.1e-21   19-100   Hairpin loop containing domain  
 
Weak hits:
ENSOGAP00000001803   0.000141   129-155   Pan module (APPLE domain)  
  0.00114   29-64   Pan module (APPLE domain)  
  0.0106   298-336   Pan module (APPLE domain)  
  0.0151   220-244   Pan module (APPLE domain)  

Microcebus murinus 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000001903   0.0000706   127-154   Pan module (APPLE domain)  
  0.0051   40-64   Pan module (APPLE domain)  
  0.00706   301-343   Pan module (APPLE domain)  
  0.0549   222-245   Pan module (APPLE domain)  
ENSMICP00000007705   0.000000942   36-84   Hairpin loop containing domain  
 
Weak hits:
ENSMICP00000001916   0.000294   110-135   Pan module (APPLE domain)  
  0.00628   13-44   Pan module (APPLE domain)  
  0.00981   278-316   Pan module (APPLE domain)  
  0.0294   202-225   Pan module (APPLE domain)  

Rattus norvegicus 76_5.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000009764   2.71e-22   37-126   Hairpin loop containing domain  
ENSRNOP00000023370   8.24e-20   19-100   Hairpin loop containing domain  
ENSRNOP00000026711   8.04e-17   20-107   Hairpin loop containing domain  
 
Weak hits:
ENSRNOP00000019237   0.000235   128-170   Pan module (APPLE domain)  
  0.000628   298-343   Pan module (APPLE domain)  
  0.0179   222-245   Anti-platelet protein  
  0.0353   41-63   Pan module (APPLE domain)  
ENSRNOP00000044970   0.000122   147-171   Pan module (APPLE domain)  
  0.00608   285-327   Pan module (APPLE domain)  
  0.0647   209-232   Anti-platelet protein  

Mus musculus 76_38 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000014578   8.24e-20   19-100   Hairpin loop containing domain  
ENSMUSP00000030683   5.89e-22   37-126   Hairpin loop containing domain  
ENSMUSP00000035211   3.73e-16   20-107   Hairpin loop containing domain  
ENSMUSP00000112174   0.0000294   128-188   Pan module (APPLE domain)  
  0.00314   298-341   Pan module (APPLE domain)  
  0.0179   222-245   Anti-platelet protein  
  0.0844   41-63   Pan module (APPLE domain)  
ENSMUSP00000125175   3.73e-16   20-107   Hairpin loop containing domain  
 
Weak hits:
ENSMUSP00000034064   0.000173   128-170   Pan module (APPLE domain)  
  0.000628   297-334   Pan module (APPLE domain)  
  0.00235   26-64   Pan module (APPLE domain)  
  0.0255   221-244   Pan module (APPLE domain)  
ENSMUSP00000091471   0.0628   361-391   Pan module (APPLE domain)  

Dipodomys ordii 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000007043   0.000000000000165   44-107   Hairpin loop containing domain  
ENSDORP00000015117   6.28e-21   36-125   Hairpin loop containing domain  
 
Weak hits:
ENSDORP00000004362   0.000589   128-154   Pan module (APPLE domain)  
  0.00883   297-345   Pan module (APPLE domain)  
  0.0147   223-260   Anti-platelet protein  
  0.0255   42-65   Pan module (APPLE domain)  
ENSDORP00000004365   0.00157   27-64   Pan module (APPLE domain)  
  0.00165   130-154   Pan module (APPLE domain)  
  0.0104   221-244   Pan module (APPLE domain)  
  0.0275   298-350   Pan module (APPLE domain)  
ENSDORP00000007338   0.0589   60-108   Hairpin loop containing domain  
ENSDORP00000010250   0.0981   89-128   Anti-platelet protein  

Ictidomys tridecemlineatus 76_2 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000002769   1.53e-21   38-127   Hairpin loop containing domain  
ENSSTOP00000008756   0.0000981   128-188   Pan module (APPLE domain)  
  0.00432   300-348   Pan module (APPLE domain)  
  0.0216   222-263   Pan module (APPLE domain)  
ENSSTOP00000012270   1.49e-17   20-107   Hairpin loop containing domain  
ENSSTOP00000022105   1.53e-21   38-127   Hairpin loop containing domain  
ENSSTOP00000023249   2.16e-21   19-100   Hairpin loop containing domain  
 
Weak hits:
ENSSTOP00000008766   0.000196   100-137   Pan module (APPLE domain)  
  0.00392   15-47   Pan module (APPLE domain)  
  0.00412   204-227   Pan module (APPLE domain)  
  0.0549   281-319   Pan module (APPLE domain)  

Heterocephalus glaber v1.7-2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000222390   8.63e-22   36-125   Hairpin loop containing domain  
HGL_H00000308938   3.53e-20   22-100   Hairpin loop containing domain  
HGL_H00000414287   5.69e-17   20-104   Hairpin loop containing domain  
 
Weak hits:
HGL_H00000264690   0.000314   82-124   Pan module (APPLE domain)  
  0.00373   4-27   Pan module (APPLE domain)  
HGL_H00000384957   0.000141   53-93   Pan module (APPLE domain)  
  0.012   240-287   Pan module (APPLE domain)  
  0.0412   160-184   Pan module (APPLE domain)  

Cavia porcellus 76_3 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000000482   1.02e-21   36-125   Hairpin loop containing domain  
ENSCPOP00000004444   0.0000451   127-156   Pan module (APPLE domain)  
  0.000392   298-341   Pan module (APPLE domain)  
  0.0235   222-245   Pan module (APPLE domain)  
  0.0353   41-63   Pan module (APPLE domain)  
ENSCPOP00000010268   4.12e-19   20-106   Hairpin loop containing domain  
ENSCPOP00000010439   2.12e-20   18-99   Hairpin loop containing domain  
 
Weak hits:
ENSCPOP00000011680   0.000114   113-153   Pan module (APPLE domain)  
  0.00334   30-64   Pan module (APPLE domain)  
  0.0255   298-334   Pan module (APPLE domain)  
  0.053   221-244   Pan module (APPLE domain)  

Oryctolagus cuniculus 76_2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000001389   2.43e-22   36-125   Hairpin loop containing domain  
ENSOCUP00000001518   1.92e-16   28-92   Hairpin loop containing domain  
ENSOCUP00000004325   2.55e-17   34-121   Hairpin loop containing domain  
ENSOCUP00000006291   0.0000471   113-154   Pan module (APPLE domain)  
  0.0018   27-87   Pan module (APPLE domain)  
  0.0139   297-334   Pan module (APPLE domain)  
  0.0373   220-243   Pan module (APPLE domain)  
 
Weak hits:
ENSOCUP00000009740   0.000569   127-154   Pan module (APPLE domain)  
  0.000824   298-341   Pan module (APPLE domain)  
  0.00706   41-64   Pan module (APPLE domain)  
  0.0196   222-245   Pan module (APPLE domain)  

Ochotona princeps 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000005523   1.29e-21   36-125   Hairpin loop containing domain  
ENSOPRP00000011810   8.63e-17   20-106   Hairpin loop containing domain  
ENSOPRP00000013962   9.42e-19   19-97   Hairpin loop containing domain  
 
Weak hits:
ENSOPRP00000004767   0.00049   126-154   Pan module (APPLE domain)  
  0.0106   219-274   Pan module (APPLE domain)  
ENSOPRP00000004785   0.000196   129-154   Pan module (APPLE domain)  
  0.00381   28-64   Pan module (APPLE domain)  
  0.00628   296-334   Pan module (APPLE domain)  

Tupaia belangeri 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000002762   0.000000188   86-125   Hairpin loop containing domain  
 
Weak hits:
ENSTBEP00000004348   0.0231   39-63   Pan module (APPLE domain)  
  0.0785   221-245   Pan module (APPLE domain)  
ENSTBEP00000004585   0.000128   98-135   Pan module (APPLE domain)  
  0.00235   9-45   Pan module (APPLE domain)  
  0.0108   201-224   Pan module (APPLE domain)  

Sus scrofa 76_10.2 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000004364   2.24e-21   19-100   Hairpin loop containing domain  
ENSSSCP00000012139   2.55e-17   20-107   Hairpin loop containing domain  
ENSSSCP00000016330   9.42e-22   33-122   Hairpin loop containing domain  
ENSSSCP00000027360   0.000000000247   20-101   Hairpin loop containing domain  
ENSSSCP00000028526   2.43e-17   20-105   Hairpin loop containing domain  
ENSSSCP00000030034   2.08e-17   20-105   Hairpin loop containing domain  
 
Weak hits:
ENSSSCP00000016742   0.00053   135-162   Pan module (APPLE domain)  
  0.00128   306-348   Pan module (APPLE domain)  
  0.0133   230-286   Pan module (APPLE domain)  
  0.0216   49-71   Pan module (APPLE domain)  
ENSSSCP00000027702   0.00255   49-72   Pan module (APPLE domain)  

Bos taurus 76_3.1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000001674   1.92e-21   26-107   Hairpin loop containing domain  
ENSBTAP00000023490   7.85e-22   36-125   Hairpin loop containing domain  
ENSBTAP00000030635   4.51e-17   20-107   Hairpin loop containing domain  
ENSBTAP00000051417   1.65e-21   26-107   Hairpin loop containing domain  
 
Weak hits:
ENSBTAP00000004648   0.000175   130-154   Pan module (APPLE domain)  
  0.000981   33-64   Pan module (APPLE domain)  
  0.0131   299-335   Pan module (APPLE domain)  
ENSBTAP00000012503   0.000116   127-155   Pan module (APPLE domain)  
  0.00883   222-278   Pan module (APPLE domain)  
  0.0126   40-64   Pan module (APPLE domain)  
  0.0143   301-342   Pan module (APPLE domain)  

Ovis aries 76_3.1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000005065   5.1e-20   26-107   Hairpin loop containing domain  
ENSOARP00000008848   0.0000373   127-155   Pan module (APPLE domain)  
  0.00314   301-342   Pan module (APPLE domain)  
  0.0112   41-64   Pan module (APPLE domain)  
  0.0151   222-278   Pan module (APPLE domain)  
ENSOARP00000014093   8.44e-17   135-222   Hairpin loop containing domain  
ENSOARP00000017969   1.14e-20   35-122   Hairpin loop containing domain  
 
Weak hits:
ENSOARP00000008884   0.000194   131-154   Pan module (APPLE domain)  
  0.00135   33-64   Pan module (APPLE domain)  
  0.00981   298-350   Pan module (APPLE domain)  
  0.0765   221-244   Pan module (APPLE domain)  

Vicugna pacos 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000009145   5.49e-22   36-125   Hairpin loop containing domain  
ENSVPAP00000011471   0.0000687   130-154   Pan module (APPLE domain)  
  0.00145   30-67   Pan module (APPLE domain)  
  0.00294   298-350   Pan module (APPLE domain)  
  0.0275   221-244   Pan module (APPLE domain)  
 
Weak hits:
ENSVPAP00000011467   0.00012   127-154   Pan module (APPLE domain)  
  0.0106   39-64   Pan module (APPLE domain)  
  0.049   222-245   Pan module (APPLE domain)  

Tursiops truncatus 76_1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000000215   1.06e-21   35-124   Hairpin loop containing domain  
ENSTTRP00000002574   4.32e-17   20-107   Hairpin loop containing domain  
ENSTTRP00000014827   0.0000902   131-154   Pan module (APPLE domain)  
  0.00157   30-64   Pan module (APPLE domain)  
  0.00235   297-333   Pan module (APPLE domain)  
  0.0275   220-243   Pan module (APPLE domain)  

Mustela putorius furo 76_1.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000004597   1.06e-19   19-100   Hairpin loop containing domain  
ENSMPUP00000010232   0.0000942   124-165   Pan module (APPLE domain)  
  0.0051   42-75   Pan module (APPLE domain)  
  0.00844   309-344   Pan module (APPLE domain)  
  0.0216   231-255   Pan module (APPLE domain)  
ENSMPUP00000013508   5.49e-17   20-107   Hairpin loop containing domain  
ENSMPUP00000018177   9.02e-22   36-125   Hairpin loop containing domain  
 
Weak hits:
ENSMPUP00000000674   0.0824   98-128   Pan module (APPLE domain)  
ENSMPUP00000010223   0.000255   127-154   Pan module (APPLE domain)  
  0.00255   222-247   Pan module (APPLE domain)  
  0.0122   297-340   Pan module (APPLE domain)  
  0.0196   40-64   Anti-platelet protein  

  1 2 3 4 5 6 7 8 9 10 11   Next Last
Showing genomes 1 to 25 of 418

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Hairpin loop containing domain-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   27432 27432
No Yes Homo sapiens 76_38 Human 18 18
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 4 4
No Yes Gorilla gorilla 76_3.1 Western gorilla 4 4
No Yes Pongo abelii 76_2 Sumatran orangutan 4 4
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 4 4
No Yes Papio anubis 76 Olive baboon 3 3
No Yes Macaca mulatta 76_1 Rhesus monkey 5 5
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 7 7
No Yes Otolemur garnettii 76_3 Small-eared galago 4 4
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 3 3
No Yes Mus musculus 76_38 House mouse 5 5
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 5 5
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 3 3
No Yes Cavia porcellus 76_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 76_2 Rabbit 4 4
No Yes Ochotona princeps 76 American pika 3 3
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 6 6
No Yes Bos taurus 76_3.1 Cattle 4 4
No Yes Ovis aries 76_3.1 Sheep 4 4
No Yes Vicugna pacos 76_1 Alpaca 2 2
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 3 3
No Yes Mustela putorius furo 76_1.0 Domestic ferret 4 4
No Yes Ailuropoda melanoleuca 76_1 Giant panda 5 5
No Yes Canis familiaris 76_3.1 Dog 4 4
No Yes Felis catus 76_6.2 Domestic cat 3 3
No Yes Equus caballus 76_2 Horse 3 3
No Yes Myotis lucifugus 76_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 76_1 Large flying fox 2 2
No Yes Sorex araneus 76_1 European shrew 3 3
No Yes Erinaceus europaeus 76 Western European hedgehog 2 2
No Yes Procavia capensis 76_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 76_3 African savanna elephant 4 4
No Yes Echinops telfairi 76 Small Madagascar hedgehog 4 4
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4 4
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 5 5
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 3 3
No Yes Ornithorhynchus anatinus 76_5 Platypus 5 5
No Yes Saccoglossus kowalevskii v3.0   40 29
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 5 5
No Yes Gallus gallus 76_4 Chicken 4 4
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 5 5
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 4 4
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 76_2.0 Green anole 4 4
No Yes Xenopus laevis African clawed frog 9 9
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 5 5
No Yes Lepisosteus oculatus 76 Spotted gar 5 5
No Yes Gadus morhua 76_1 Atlantic cod 4 4
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 10 8
No Yes Takifugu rubripes 76_4 Torafugu 21 21
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 10 8
No Yes Oryzias latipes 76_1 Japanese medaka 8 6
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 10 8
No Yes Poecilia formosa 76 Amazon molly 7 6
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 11 10
No Yes Astyanax mexicanus 76 Mexican tetra 4 4
No Yes Danio rerio 76_9 Zebrafish 6 6
No Yes Oikopleura dioica   6 5
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 76 Vase tunicate 3 3
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 48 41
No Yes Adineta vaga   29 29
No Yes Octopus bimaculoides 280   81 45
No Yes Crassostrea gigas 22 Pacific oyster 73 60
No Yes Lottia gigantea Owl limpet 48 39
No Yes Helobdella robusta   57 55
No Yes Capitella sp. I   98 69
No Yes Danaus plexippus OGS1.0 Monarch butterfly 10 5
No Yes Heliconius melpomene Postman butterfly 7 4
No Yes Bombyx mori Domestic silkworm 6 4
No Yes Nasonia vitripennis Jewel wasp 9 5
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 13 6
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 10 5
No Yes Linepithema humile v1.1 Argentine ant 13 7
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 9 7
No Yes Solenopsis invicta v.2.2.3 Red fire ant 11 7
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 10 6
No Yes Atta cephalotes v1.1   12 7
No Yes Camponotus floridanus v3.3 Florida carpenter ant 9 6
No Yes Lucilia cuprina Australian sheep blowfly 12 6
No Yes Drosophila grimshawi 1.3   17 8
No Yes Drosophila willistoni 1.3   17 8
No Yes Drosophila pseudoobscura 2.13   13 6
No Yes Drosophila persimilis 1.3   15 7
No Yes Drosophila suzukii   15 7
No Yes Drosophila yakuba 1.3   15 7
No Yes Drosophila simulans 1.3   13 6
No Yes Drosophila sechellia 1.3   15 7
No Yes Drosophila melanogaster 76_5 Fruit fly 38 14
No Yes Drosophila erecta 1.3   15 7
No Yes Drosophila ananassae 1.3   16 7
No Yes Drosophila virilis 1.2   16 8
No Yes Drosophila mojavensis 1.3   17 8
No Yes Megaselia scalaris 22   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 11 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 10 5
No Yes Anopheles darlingi 22 American malaria mosquito 9 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 9 4
No Yes Tribolium castaneum 3.0 Red flour beetle 13 6
No Yes Pediculus humanus corporis (Early assembly) Human body louse 10 6
No Yes Acyrthosiphon pisum Pea aphid 10 6
No Yes Rhodnius prolixus 22   10 5
No Yes Daphnia pulex Common water flea 29 15
No Yes Strigamia maritima 22   27 11
No Yes Sarcoptes scabiei   22 7
No Yes Tetranychus urticae Two-spotted spider mite 96 73
No Yes Ixodes scapularis (Preliminary) Black-legged tick 22 14
No Yes Pristionchus pacificus   44 26
No Yes Meloidogyne incognita Southern root-knot nematode 37 19
No Yes Meloidogyne hapla   15 9
No Yes Onchocerca volvulus 22   35 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 36 15
No Yes Caenorhabditis japonica   41 19
No Yes Caenorhabditis brenneri   53 22
No Yes Caenorhabditis remanei   51 27
No Yes Caenorhabditis elegans 76_235 Roundworm 69 32
No Yes Caenorhabditis briggsae 2   44 20
No Yes Trichinella spiralis 22   45 29
No Yes Mnemiopsis leidyi Sea walnut 53 23
No Yes Acropora digitifera v1.0   63 62
No Yes Nematostella vectensis 1.0 Starlet sea anemone 85 81
No Yes Hydra vulgaris   6 6
No Yes Amphimedon queenslandica   1 1
No Yes Proterospongia sp. ATCC 50818   4 2
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   4 3
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Podospora anserina   1 1
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   6 5
No Yes Nectria haematococca mpVI   6 5
No Yes Fusarium oxysporum f. sp. lycopersici 4286   5 5
No Yes Fusarium verticillioides 7600   7 6
No Yes Trichoderma asperellum CBS 433.97 v1.0   3 3
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   5 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   4 2
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 2
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 2 2
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   2 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus glaucus   4 4
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus wentii v1.0   3 3
No Yes Aspergillus oryzae RIB40   3 3
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Dictyostelium discoideum   1 1
No Yes Selaginella moellendorffii   8 8
No Yes Pinus taeda Loblolly pine 3 3
No Yes Picea abies Norway spruce 3 3
No Yes Eucalyptus grandis v201 Rose gum 10 10
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   1 1
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 3 3
No Yes Thellungiella halophila v173   2 2
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 5 5
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 4 4
No Yes Fragaria vesca Wild strawberry 2 2
No Yes Malus domestica v196 Apple 5 5
No Yes Prunus persica v139 Peach 3 3
No Yes Linum usitatissimum v200 Flax 5 5
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 4 4
No Yes Vitis vinifera Wine grape 7 7
No Yes Solanum lycopersicum v.2.3 Tomato 3 3
No Yes Solanum tuberosum Potato 5 5
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   5 5
No Yes Triticum urartu 22   10 10
No Yes Triticum aestivum 22 Bread wheat 18 18
No Yes Aegilops tauschii 22   9 9
No Yes Brachypodium distachyon Stiff brome 4 4
No Yes Oryza barthii 22 African wild rice 7 7
No Yes Oryza meridionalis 22   9 9
No Yes Oryza glumaepatula 22   10 10
No Yes Oryza glaberrima African rice 7 7
No Yes Oryza punctata 22   7 7
No Yes Oryza nivara 22   9 9
No Yes Oryza brachyantha 22 Malo sina 10 10
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 11 11
No Yes Oryza sativa v193 Rice 11 11
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 10 10
No Yes Panicum virgatum v202 Switchgrass 8 8
No Yes Setaria italica v164 Foxtail millet 3 3
No Yes Zea mays subsp. mays Maize 9 9
No Yes Zea mays v181 Maize 8 8
No Yes Sorghum bicolor Sorghum 10 10
No Yes Musa balbisiana Balbis banana 5 5
No Yes Musa acuminata 22 Wild Malaysian banana 5 5
No Yes Amborella trichopoda 22   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   4 4
No Yes Aureococcus anophagefferens   1 1
No Yes Pythium iwayamai DAOM BR242034 22   10 10
No Yes Pythium arrhenomanes ATCC 12531 22   11 11
No Yes Pythium ultimum v1.7-2   10 9
No Yes Pythium aphanidermatum DAOM BR444 22   12 12
No Yes Pythium irregulare DAOM BR486 22   3 3
No Yes Pythium vexans DAOM BR484 22   6 5
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   4 4
No Yes Phytophthora capsici   1 1
No Yes Cryptosporidium hominis   3 3
No Yes Cryptosporidium muris   3 3
No Yes Cryptosporidium parvum Iowa II   3 3
No Yes Neospora caninum   84 18
No Yes Toxoplasma gondii VEG   81 13
No Yes Toxoplasma gondii ME49   77 16
No Yes Toxoplasma gondii GT1   58 14
No Yes Symbiodinium minutum clade B1 v1.2   55 48
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   4 4
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Thermovibrio ammonificans HB-1   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   3 2
No Yes Rhizobium leguminosarum bv. viciae 3841   2 2
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium sp. BNC1   2 2
No Yes Mesorhizobium opportunistum WSM2075   2 2
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   4 4
No Yes Methylocella silvestris BL2   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Thiocystis violascens DSM 198   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 3 3
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 38 14
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 10 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 23
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 56 25
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 14 14
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 11 11
No Yes Neospora caninum Nc-Liverpool 6.2   84 18
No Yes Desulfocapsa sulfexigens DSM 10523   2 1
No Yes Variovorax paradoxus EPS   2 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Sinorhizobium fredii USDA 257   3 2
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Thioflavicoccus mobilis 8321   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 20 20
No Yes Homo sapiens (NCBI version) Human 10 10
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 4 4
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 30 15
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 28 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 25 11
No Yes Lotus japonicus (Early assembly)   2 2
No Yes Malus x domestica (Duplicate) Apple 5 5
No Yes Ricinus communis (Early assembly) Castor bean 3 3
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   8 8
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 2
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 3 3
No Yes Phoenix dactylifera (Early draft) Date palm 2 2
No Yes Homo sapiens 69_37 Human 6 6
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 4 4
No Yes Gorilla gorilla 69_3.1 Western gorilla 3 3
No Yes Pongo abelii 69_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 69_3 Small-eared galago 4 4
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 4 4
No Yes Mus musculus 69_38 House mouse 4 4
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 4 4
No Yes Cavia porcellus 69_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 69_2 Rabbit 4 4
No Yes Ochotona princeps 69 American pika 3 3
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 4 4
No Yes Bos taurus 69_3.1 Cattle 3 3
No Yes Vicugna pacos 69_1 Alpaca 2 2
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 3 3
No Yes Mustela putorius furo 69_1.0 Domestic ferret 4 4
No Yes Ailuropoda melanoleuca 69_1 Giant panda 4 4
No Yes Canis familiaris 69_3.1 Dog 3 3
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 3 3
No Yes Myotis lucifugus 69_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 69_1 Large flying fox 2 2
No Yes Sorex araneus 69_1 European shrew 3 3
No Yes Erinaceus europaeus 69 Western European hedgehog 2 2
No Yes Procavia capensis 69_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 69_3 African savanna elephant 4 4
No Yes Echinops telfairi 69 Small Madagascar hedgehog 4 4
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 3 3
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 3 3
No Yes Ornithorhynchus anatinus 69_5 Platypus 3 3
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 3 3
No Yes Gallus gallus 69_2 Chicken 3 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 5 5
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 3 3
No Yes Gadus morhua 69_1 Atlantic cod 4 4
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 7 5
No Yes Takifugu rubripes 69_4 Torafugu 3 3
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 8 6
No Yes Oryzias latipes 69_1 Japanese medaka 6 5
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 10 8
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 8 7
No Yes Danio rerio 69_9 Zebrafish 4 4
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 3 3
No Yes Drosophila melanogaster 69_5 Fruit fly 16 7
No Yes Caenorhabditis elegans 69_215 Roundworm 50 23
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   3 3
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   2 2
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   7901 5703
No Yes Protozoadb 2010_08 (Protozoadb)   169 47
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   821 559
No Yes Uniprot 2018_03 genome   11175 6909
No Yes Global Ocean Sampling Expedition (GOS)   46 46
No Yes NCBI plasmid sequences (Plasmids)   17 17
No Yes NCBI viral sequences (Viral)   10 9
No Yes PDB chains (SCOP 1.75) (PDB)   8 8
No Yes Protein Data Bank (all PDB sequenc)   98 97
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   208 208
No Yes TargetDB (Targets)   65 28
No Yes UniProt viral sequences (Viral)   3 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]