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Crambin-like superfamily domain assignments
in
Brachypodium distachyon

Network of domain occurrence in all genomes


Assignment details

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Brachypodium distachyon has 8 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G57280.1   0.00000000000157   29-74   Crambin-like  
EG:BRADI1G57285.1   0.00000000000589   29-73   Crambin-like  
EG:BRADI1G57290.1   0.00000000000288   55-99   Crambin-like  
EG:BRADI1G57290.2   0.00000000000183   55-99   Crambin-like  
EG:BRADI1G57296.1   0.00000000000471   29-73   Crambin-like  
EG:BRADI1G57302.1   0.00000000000000366   29-73   Crambin-like  
EG:BRADI1G57337.1   0.00000000000000116   29-73   Crambin-like  
EG:BRADI1G57400.1   0.00000000000000445   29-73   Crambin-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   928 928
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   26 25
No Yes Arabidopsis lyrata Lyrate rockcress 3 3
No Yes Arabidopsis thaliana 10 Thale cress 4 4
No Yes Triticum urartu 22   4 4
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 8 8
No Yes Oryza barthii 22 African wild rice 5 5
No Yes Oryza glumaepatula 22   3 3
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22   7 7
No Yes Oryza nivara 22   5 5
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 13 12
No Yes Oryza sativa v193 Rice 13 12
No Yes Panicum virgatum v202 Switchgrass 17 17
No Yes Setaria italica v164 Foxtail millet 9 9
No Yes Zea mays v181 Maize 2 2
No Yes Sorghum bicolor Sorghum 1 1
No Yes Hordeum vulgare 22 Domesticated barley 12 12
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 6 6
No Yes Arabidopsis thaliana 10 Thale cress 4 4
No Yes NCBI 2017_08 genome   187 185
No Yes STRING v9.0.5 (STRING)   30 29
No Yes Uniprot 2018_03 genome   321 318
No Yes PDB chains (SCOP 1.75) (PDB)   11 11
No Yes Protein Data Bank (all PDB sequenc)   48 48
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   140 140
No Yes TargetDB (Targets)   1 1

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