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Trefoil superfamily domain assignments
in
Monodelphis domestica 69_5

Assignment details

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Monodelphis domestica 69_5 has 11 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMODP00000000323   0.0000288   30-73   Trefoil  
ENSMODP00000002654   0.0000000000706   82-141   Trefoil  
ENSMODP00000011228   0.00000000413   130-179   Trefoil  
ENSMODP00000020347   0.0000000303   921-971   Trefoil  
ENSMODP00000020348   0.00000000654   914-963   Trefoil  
  0.00000000824   1817-1869   Trefoil  
ENSMODP00000026285   2.62e-18   27-74   Trefoil  
ENSMODP00000026286   0.00000000000000733   25-74   Trefoil  
  0.0000000000000249   78-124   Trefoil  
ENSMODP00000026287   7.06e-16   25-74   Trefoil  
ENSMODP00000033461   0.00000051   255-298   Trefoil  
 
Weak hits:
ENSMODP00000039539   0.00994   79-119   Trefoil  
ENSMODP00000040403   0.000144   27-48   Trefoil  

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Select to display   Genome       Domains   Proteins
No Yes ALL   8374 8374
No Yes Homo sapiens 76_38 Human 20 18
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 11 10
No Yes Gorilla gorilla 76_3.1 Western gorilla 12 11
No Yes Pongo abelii 76_2 Sumatran orangutan 11 10
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 8 7
No Yes Papio anubis 76 Olive baboon 9 9
No Yes Macaca mulatta 76_1 Rhesus monkey 11 10
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 14 11
No Yes Otolemur garnettii 76_3 Small-eared galago 12 11
No Yes Microcebus murinus 76_1 Gray mouse lemur 6 5
No Yes Rattus norvegicus 76_5.0 Norway rat 8 7
No Yes Mus musculus 76_38 House mouse 10 9
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 7 7
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 12 9
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 11 10
No Yes Cavia porcellus 76_3 Domestic guinea pig 10 8
No Yes Oryctolagus cuniculus 76_2 Rabbit 8 7
No Yes Ochotona princeps 76 American pika 10 8
No Yes Tupaia belangeri 76 Northern tree shrew 4 3
No Yes Sus scrofa 76_10.2 Pig 9 8
No Yes Bos taurus 76_3.1 Cattle 9 8
No Yes Ovis aries 76_3.1 Sheep 12 10
No Yes Vicugna pacos 76_1 Alpaca 2 2
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 9 8
No Yes Mustela putorius furo 76_1.0 Domestic ferret 9 8
No Yes Ailuropoda melanoleuca 76_1 Giant panda 10 9
No Yes Canis familiaris 76_3.1 Dog 11 9
No Yes Felis catus 76_6.2 Domestic cat 9 8
No Yes Equus caballus 76_2 Horse 12 11
No Yes Myotis lucifugus 76_2.0 Little brown bat 8 7
No Yes Pteropus vampyrus 76_1 Large flying fox 9 8
No Yes Sorex araneus 76_1 European shrew 3 3
No Yes Erinaceus europaeus 76 Western European hedgehog 5 5
No Yes Procavia capensis 76_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 76_3 African savanna elephant 11 10
No Yes Echinops telfairi 76 Small Madagascar hedgehog 7 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 6 6
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 7 6
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 7 6
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 11 9
No Yes Ornithorhynchus anatinus 76_5 Platypus 9 8
No Yes Saccoglossus kowalevskii v3.0   18 14
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 76_2 Turkey 6 5
No Yes Gallus gallus 76_4 Chicken 7 6
No Yes Anas platyrhynchos 76_1.0 Mallard 6 5
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 8 6
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 6 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 8 7
No Yes Anolis carolinensis 76_2.0 Green anole 10 6
No Yes Xenopus laevis African clawed frog 83 32
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 17 9
No Yes Latimeria chalumnae 76_1 Coelacanth 9 9
No Yes Lepisosteus oculatus 76 Spotted gar 11 10
No Yes Gadus morhua 76_1 Atlantic cod 8 8
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 6 6
No Yes Takifugu rubripes 76_4 Torafugu 10 10
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 6 6
No Yes Oryzias latipes 76_1 Japanese medaka 8 8
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 6 6
No Yes Poecilia formosa 76 Amazon molly 6 6
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 7 7
No Yes Astyanax mexicanus 76 Mexican tetra 7 7
No Yes Danio rerio 76_9 Zebrafish 12 12
No Yes Oikopleura dioica   24 19
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 36 32
No Yes Ciona intestinalis 76 Vase tunicate 34 25
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 5 5
No Yes Adineta vaga   19 15
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 4 3
No Yes Helobdella robusta   2 2
No Yes Capitella sp. I   13 7
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 2 2
No Yes Sarcoptes scabiei   1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus   3 3
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   2 2
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 4 4
No Yes Trichinella spiralis 22   1 1
No Yes Hymenolepis microstoma   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 4 4
No Yes Acropora digitifera v1.0   9 6
No Yes Nematostella vectensis 1.0 Starlet sea anemone 4 2
No Yes Hydra vulgaris   5 4
No Yes Amphimedon queenslandica   9 5
No Yes Trichoplax adhaerens   4 4
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   8 8
No Yes Mortierella verticillata NRRL 6337   4 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 2
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   2 2
No Yes Cyanidioschyzon merolae strain 10D 22   22 15
No Yes Cyanidioschyzon merolae   22 15
No Yes Porphyridium purpureum 02_2012   2 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Pythium iwayamai DAOM BR242034 22   3 3
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Guillardia theta CCMP2712 v1.0   2 2
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 47 22
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 12 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 23 20
No Yes Homo sapiens (NCBI version) Human 11 10
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 9 8
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Homo sapiens 69_37 Human 13 10
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 11 10
No Yes Gorilla gorilla 69_3.1 Western gorilla 10 9
No Yes Pongo abelii 69_2 Sumatran orangutan 11 10
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 8 7
No Yes Macaca mulatta 69_1 Rhesus monkey 10 9
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 12 9
No Yes Otolemur garnettii 69_3 Small-eared galago 10 9
No Yes Microcebus murinus 69_1 Gray mouse lemur 6 5
No Yes Rattus norvegicus 69_3.4 Norway rat 11 10
No Yes Mus musculus 69_38 House mouse 8 7
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 7 7
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 9 7
No Yes Cavia porcellus 69_3 Domestic guinea pig 10 8
No Yes Oryctolagus cuniculus 69_2 Rabbit 9 8
No Yes Ochotona princeps 69 American pika 10 8
No Yes Tupaia belangeri 69 Northern tree shrew 4 3
No Yes Sus scrofa 69_10.2 Pig 8 7
No Yes Bos taurus 69_3.1 Cattle 9 8
No Yes Vicugna pacos 69_1 Alpaca 2 2
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 9 8
No Yes Mustela putorius furo 69_1.0 Domestic ferret 9 8
No Yes Ailuropoda melanoleuca 69_1 Giant panda 10 9
No Yes Canis familiaris 69_3.1 Dog 10 8
No Yes Felis catus 69 Domestic cat 6 5
No Yes Equus caballus 69_2 Horse 10 9
No Yes Myotis lucifugus 69_2.0 Little brown bat 8 7
No Yes Pteropus vampyrus 69_1 Large flying fox 9 8
No Yes Sorex araneus 69_1 European shrew 3 3
No Yes Erinaceus europaeus 69 Western European hedgehog 5 5
No Yes Procavia capensis 69_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 69_3 African savanna elephant 8 7
No Yes Echinops telfairi 69 Small Madagascar hedgehog 7 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 7 6
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 7 6
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 11 9
No Yes Ornithorhynchus anatinus 69_5 Platypus 9 8
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 69_2 Turkey 6 5
No Yes Gallus gallus 69_2 Chicken 5 4
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 8 6
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 8 7
No Yes Anolis carolinensis 69_2.0 Green anole 6 5
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 13 6
No Yes Latimeria chalumnae 69_1 Coelacanth 8 8
No Yes Gadus morhua 69_1 Atlantic cod 6 6
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 5 5
No Yes Takifugu rubripes 69_4 Torafugu 5 5
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 4 4
No Yes Oryzias latipes 69_1 Japanese medaka 7 7
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 6 6
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 7 7
No Yes Danio rerio 69_9 Zebrafish 12 12
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 11 10
No Yes Ciona intestinalis 69 Vase tunicate 34 25
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes NCBI 2017_08 genome   2983 2485
No Yes STRING v9.0.5 (STRING)   290 252
No Yes Uniprot 2018_03 genome   2572 2154
No Yes Global Ocean Sampling Expedition (GOS)   6 5
No Yes PDB chains (SCOP 1.75) (PDB)   5 4
No Yes Protein Data Bank (all PDB sequenc)   49 42
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   86 86
No Yes TargetDB (Targets)   1 1

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