SUPERFAMILY 1.75 HMM library and genome assignments server

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Leucine zipper domain superfamily domain assignments
in
Bacillus weihenstephanensis KBAB4


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Select to display   Genome       Domains   Proteins
No Yes ALL   122045 122045
No Yes Homo sapiens 76_38 Human 191 191
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 49 49
No Yes Gorilla gorilla 76_3.1 Western gorilla 67 67
No Yes Pongo abelii 76_2 Sumatran orangutan 47 47
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 53 53
No Yes Papio anubis 76 Olive baboon 57 57
No Yes Macaca mulatta 76_1 Rhesus monkey 78 78
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 94 94
No Yes Otolemur garnettii 76_3 Small-eared galago 48 48
No Yes Microcebus murinus 76_1 Gray mouse lemur 34 34
No Yes Rattus norvegicus 76_5.0 Norway rat 60 60
No Yes Mus musculus 76_38 House mouse 128 128
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 30 30
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 47 47
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 52 52
No Yes Cavia porcellus 76_3 Domestic guinea pig 50 50
No Yes Oryctolagus cuniculus 76_2 Rabbit 44 44
No Yes Ochotona princeps 76 American pika 30 30
No Yes Tupaia belangeri 76 Northern tree shrew 30 30
No Yes Sus scrofa 76_10.2 Pig 56 56
No Yes Bos taurus 76_3.1 Cattle 52 52
No Yes Ovis aries 76_3.1 Sheep 50 50
No Yes Vicugna pacos 76_1 Alpaca 20 20
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 38 38
No Yes Mustela putorius furo 76_1.0 Domestic ferret 50 50
No Yes Ailuropoda melanoleuca 76_1 Giant panda 50 50
No Yes Canis familiaris 76_3.1 Dog 63 63
No Yes Felis catus 76_6.2 Domestic cat 44 44
No Yes Equus caballus 76_2 Horse 43 43
No Yes Myotis lucifugus 76_2.0 Little brown bat 46 46
No Yes Pteropus vampyrus 76_1 Large flying fox 44 44
No Yes Sorex araneus 76_1 European shrew 22 22
No Yes Erinaceus europaeus 76 Western European hedgehog 21 21
No Yes Procavia capensis 76_1 Cape rock hyrax 32 32
No Yes Loxodonta africana 76_3 African savanna elephant 52 52
No Yes Echinops telfairi 76 Small Madagascar hedgehog 22 22
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 62 62
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 21 21
No Yes Macropus eugenii 76_1.0 Tammar wallaby 30 30
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 50 50
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 44 44
No Yes Ornithorhynchus anatinus 76_5 Platypus 40 40
No Yes Saccoglossus kowalevskii v3.0   60 58
No Yes Petromyzon marinus 76_7.0 Sea lamprey 21 21
No Yes Meleagris gallopavo 76_2 Turkey 33 33
No Yes Gallus gallus 76_4 Chicken 38 38
No Yes Anas platyrhynchos 76_1.0 Mallard 36 36
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 38 38
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 40 40
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 43 43
No Yes Anolis carolinensis 76_2.0 Green anole 46 46
No Yes Xenopus laevis African clawed frog 97 97
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 54 54
No Yes Latimeria chalumnae 76_1 Coelacanth 59 59
No Yes Lepisosteus oculatus 76 Spotted gar 52 52
No Yes Gadus morhua 76_1 Atlantic cod 54 54
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 70 70
No Yes Takifugu rubripes 76_4 Torafugu 162 161
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 71 71
No Yes Oryzias latipes 76_1 Japanese medaka 64 64
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 68 68
No Yes Poecilia formosa 76 Amazon molly 70 70
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 90 90
No Yes Astyanax mexicanus 76 Mexican tetra 72 72
No Yes Danio rerio 76_9 Zebrafish 108 108
No Yes Oikopleura dioica   34 33
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 20 20
No Yes Ciona intestinalis 76 Vase tunicate 24 24
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 24 23
No Yes Adineta vaga   53 53
No Yes Octopus bimaculoides 280   26 25
No Yes Crassostrea gigas 22 Pacific oyster 42 39
No Yes Lottia gigantea Owl limpet 36 36
No Yes Helobdella robusta   26 26
No Yes Capitella sp. I   30 30
No Yes Danaus plexippus OGS1.0 Monarch butterfly 19 19
No Yes Heliconius melpomene Postman butterfly 15 15
No Yes Bombyx mori Domestic silkworm 17 17
No Yes Nasonia vitripennis Jewel wasp 19 19
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 25 25
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 20 20
No Yes Linepithema humile v1.1 Argentine ant 17 17
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 20 20
No Yes Solenopsis invicta v.2.2.3 Red fire ant 16 16
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 19 19
No Yes Atta cephalotes v1.1   17 17
No Yes Camponotus floridanus v3.3 Florida carpenter ant 19 19
No Yes Lucilia cuprina Australian sheep blowfly 17 17
No Yes Drosophila grimshawi 1.3   16 16
No Yes Drosophila willistoni 1.3   17 17
No Yes Drosophila pseudoobscura 2.13   16 16
No Yes Drosophila persimilis 1.3   15 15
No Yes Drosophila suzukii   13 13
No Yes Drosophila yakuba 1.3   16 16
No Yes Drosophila simulans 1.3   16 16
No Yes Drosophila sechellia 1.3   18 18
No Yes Drosophila melanogaster 76_5 Fruit fly 69 69
No Yes Drosophila erecta 1.3   17 17
No Yes Drosophila ananassae 1.3   14 14
No Yes Drosophila virilis 1.2   15 15
No Yes Drosophila mojavensis 1.3   15 15
No Yes Megaselia scalaris 22   8 8
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 24 24
No Yes Culex pipiens quinquefasciatus Southern house mosquito 22 22
No Yes Anopheles darlingi 22 American malaria mosquito 16 16
No Yes Anopheles gambiae 49_3j African malaria mosquito 22 22
No Yes Tribolium castaneum 3.0 Red flour beetle 21 21
No Yes Pediculus humanus corporis (Early assembly) Human body louse 18 18
No Yes Acyrthosiphon pisum Pea aphid 19 19
No Yes Rhodnius prolixus 22   14 14
No Yes Daphnia pulex Common water flea 24 24
No Yes Strigamia maritima 22   24 24
No Yes Sarcoptes scabiei   14 14
No Yes Tetranychus urticae Two-spotted spider mite 30 30
No Yes Ixodes scapularis (Preliminary) Black-legged tick 19 19
No Yes Pristionchus pacificus   30 28
No Yes Meloidogyne incognita Southern root-knot nematode 21 21
No Yes Meloidogyne hapla   12 12
No Yes Onchocerca volvulus 22   18 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 26 24
No Yes Caenorhabditis japonica   24 23
No Yes Caenorhabditis brenneri   28 26
No Yes Caenorhabditis remanei   35 34
No Yes Caenorhabditis elegans 76_235 Roundworm 57 56
No Yes Caenorhabditis briggsae 2   26 25
No Yes Trichinella spiralis 22   12 11
No Yes Hymenolepis microstoma   19 18
No Yes Echinococcus multilocularis   18 17
No Yes Echinococcus granulosus   18 17
No Yes Taenia solium Pork tapeworm 17 17
No Yes Schistosoma mansoni   13 12
No Yes Mnemiopsis leidyi Sea walnut 13 13
No Yes Thelohanellus kitauei   5 5
No Yes Acropora digitifera v1.0   18 18
No Yes Nematostella vectensis 1.0 Starlet sea anemone 35 35
No Yes Hydra vulgaris   21 21
No Yes Amphimedon queenslandica   19 19
No Yes Trichoplax adhaerens   15 15
No Yes Proterospongia sp. ATCC 50818   18 18
No Yes Monosiga brevicollis   14 14
No Yes Sphaeroforma arctica JP610   15 15
No Yes Capsaspora owczarzaki ATCC 30864   22 22
No Yes Conidiobolus coronatus NRRL28638 v1.0   16 16
No Yes Mortierella verticillata NRRL 6337   30 30
No Yes Phycomyces blakesleeanus   47 47
No Yes Rhizopus oryzae RA 99-880   53 53
No Yes Mucor circinelloides   54 54
No Yes Rhizomucor miehei CAU432   45 43
No Yes Malassezia globosa CBS 7966   16 16
No Yes Sporisorium reilianum 22   15 15
No Yes Ustilago maydis   14 14
No Yes Mixia osmundae IAM 14324 v1.0   12 12
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   13 13
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   12 12
No Yes Melampsora laricis-populina   13 13
No Yes Rhodotorula graminis WP1 v1.0   14 14
No Yes Sporobolomyces roseus IAM 13481   7 7
No Yes Microbotryum violaceum 22   20 20
No Yes Wallemia sebi v1.0   11 11
No Yes Sphaerobolus stellatus v1.0   13 13
No Yes Piloderma croceum F 1598 v1.0   15 15
No Yes Serpula lacrymans var. lacrymans S7.9   11 11
No Yes Coniophora puteana   13 13
No Yes Hydnomerulius pinastri v2.0   14 14
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   14 14
No Yes Pisolithus microcarpus 441 v1.0   14 14
No Yes Pisolithus tinctorius Marx 270 v1.0   11 11
No Yes Scleroderma citrinum Foug A v1.0   14 14
No Yes Coprinopsis cinerea okayama7 130 v3   15 15
No Yes Pleurotus ostreatus Oyster mushroom 11 11
No Yes Amanita thiersii Skay4041 v1.0   12 12
No Yes Amanita muscaria Koide v1.0 Fly agaric 15 15
No Yes Galerina marginata v1.0   17 17
No Yes Hebeloma cylindrosporum h7 v2.0   13 13
No Yes Laccaria bicolor S238N-H82   13 13
No Yes Agaricus bisporus var. bisporus   14 14
No Yes Schizophyllum commune   16 16
No Yes Stereum hirsutum FP-91666 SS1 v1.0   14 14
No Yes Heterobasidion annosum   12 12
No Yes Gloeophyllum trabeumv1.0   13 13
No Yes Punctularia strigosozonata v1.0   16 16
No Yes Sebacina vermifera MAFF 305830 v1.0   13 13
No Yes Fomitiporia mediterranea v1.0   26 26
No Yes Tulasnella calospora AL13/4D v1.0   12 12
No Yes Postia placenta   17 17
No Yes Wolfiporia cocos MD-104 SS10 v1.0   12 12
No Yes Fomitopsis pinicolav1.0   13 13
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   13 13
No Yes Phanerochaete chrysosporium RP-78 2.1   9 9
No Yes Dichomitus squalens   11 11
No Yes Trametes versicolor v1.0   14 14
No Yes Tremella mesenterica Witches' butter 15 15
No Yes Daldinia eschscholzii EC12 v1.0   22 22
No Yes Apiospora montagnei NRRL 25634 v1.0   32 32
No Yes Magnaporthe poae ATCC 64411 22   23 23
No Yes Magnaporthe grisea 70-15   22 22
No Yes Podospora anserina   21 21
No Yes Sporotrichum thermophile ATCC 42464   18 18
No Yes Thielavia terrestris NRRL 8126   19 19
No Yes Chaetomium globosum CBS 148.51   15 15
No Yes Neurospora tetrasperma   20 20
No Yes Neurospora discreta FGSC 8579   17 17
No Yes Neurospora crassa OR74A   21 21
No Yes Cryphonectria parasitica Chestnut blight fungus 20 20
No Yes Verticillium albo-atrum VaMs.102   14 14
No Yes Verticillium dahliae VdLs.17   26 26
No Yes Acremonium alcalophilumv 1.0   18 18
No Yes Glomerella graminicola 22   26 26
No Yes Fusarium graminearum   26 26
No Yes Nectria haematococca mpVI   28 28
No Yes Fusarium oxysporum f. sp. lycopersici 4286   96 96
No Yes Fusarium verticillioides 7600   27 27
No Yes Trichoderma asperellum CBS 433.97 v1.0   31 31
No Yes Trichoderma atroviride   27 27
No Yes Trichoderma citrinoviride v1.0   25 25
No Yes Trichoderma reesei 1.2   21 21
No Yes Trichoderma virens Gv29-8   26 26
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   21 21
No Yes Trichoderma harzianum CBS 226.95 v1.0   33 33
No Yes Amorphotheca resinae v1.0 Creosote fungus 22 22
No Yes Botrytis cinerea B05.10   19 19
No Yes Sclerotinia sclerotiorum   21 21
No Yes Blumeria graminis 22   11 11
No Yes Didymella exigua CBS 183.55 v1.0   23 23
No Yes Leptosphaeria maculans 22   16 16
No Yes Setosphaeria turcica v1.0   26 26
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   25 25
No Yes Cochliobolus victoriae FI3 v1.0   29 29
No Yes Cochliobolus carbonum 26-R-13 v1.0   25 25
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 17 17
No Yes Alternaria brassicicola   21 21
No Yes Cochliobolus lunatus m118 v2.0   24 24
No Yes Pyrenophora teres f. teres 22   23 23
No Yes Pyrenophora tritici-repentis   21 21
No Yes Stagonospora nodorum   22 22
No Yes Mycosphaerella graminicola IPO323   15 15
No Yes Zasmidium cellare ATCC 36951 v1.0   38 38
No Yes Dothistroma septosporum   18 18
No Yes Septoria musiva v1.0   21 21
No Yes Mycosphaerella fijiensis CIRAD86   17 17
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   19 19
No Yes Paracoccidioides brasiliensis Pb18   16 16
No Yes Coccidioides posadasii RMSCC 3488   16 16
No Yes Coccidioides immitis RS   20 20
No Yes Ajellomyces dermatitidis SLH14081   19 19
No Yes Histoplasma capsulatum class NAmI strain WU24   17 17
No Yes Microsporum canis CBS 113480   18 18
No Yes Trichophyton equinum CBS 127.97   18 18
No Yes Trichophyton verrucosum HKI 0517   17 17
No Yes Arthroderma benhamiae CBS 112371   17 17
No Yes Trichophyton tonsurans CBS 112818   17 17
No Yes Trichophyton rubrum CBS 118892   19 19
No Yes Uncinocarpus reesii 1704   18 18
No Yes Aspergillus zonatus v1.0   24 24
No Yes Penicillium chrysogenum Wisconsin 54-1255   30 30
No Yes Penicillium chrysogenum v1.0   26 26
No Yes Aspergillus acidus v1.0   27 27
No Yes Aspergillus fumigatus Af293   21 21
No Yes Aspergillus brasiliensis v1.0   28 28
No Yes Aspergillus nidulans FGSC A4   24 24
No Yes Aspergillus sydowii v1.0   34 34
No Yes Aspergillus versicolor v1.0   35 35
No Yes Aspergillus glaucus   23 23
No Yes Aspergillus carbonarius ITEM 5010   22 22
No Yes Neosartorya fischeri NRRL 181   27 27
No Yes Aspergillus terreus NIH2624   22 22
No Yes Aspergillus tubingensis v1.0   24 24
No Yes Aspergillus wentii v1.0   24 24
No Yes Aspergillus oryzae RIB40   22 22
No Yes Aspergillus niger 22   27 27
No Yes Aspergillus niger ATCC 1015   14 14
No Yes Aspergillus flavus NRRL3357   28 28
No Yes Aspergillus clavatus NRRL 1   28 28
No Yes Penicillium marneffei ATCC 18224   26 26
No Yes Tuber melanosporum Mel28 22   16 16
No Yes Tuber melanosporum Vittad Perigord truffle 33 33
No Yes Hansenula polymorpha v2.0   10 10
No Yes Dekkera bruxellensis CBS 2499 v2.0   7 7
No Yes Pichia membranifaciensv1.0   9 9
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   10 10
No Yes Candida dubliniensis CD36   10 10
No Yes Candida tropicalis MYA-3404   10 10
No Yes Candida parapsilosis   10 10
No Yes Candida albicans SC5314   10 10
No Yes Lodderomyces elongisporus NRRL YB-4239   10 10
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   11 11
No Yes Pichia stipitis CBS 6054   11 11
No Yes Candida guilliermondii ATCC 6260   12 12
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   10 10
No Yes Debaromyces hansenii   11 11
No Yes Wickerhamomyces anomalus   11 11
No Yes Pichia pastoris GS115   12 12
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   8 8
No Yes Yarrowia lipolytica CLIB122   10 10
No Yes Candida lusitaniae ATCC 42720   10 10
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   10 10
No Yes Vanderwaltozyma polyspora DSM 70294   15 15
No Yes Candida glabrata CBS138   15 15
No Yes Kluyveromyces thermotolerans CBS 6340   12 12
No Yes Lachancea kluyveri   12 12
No Yes Kluyveromyces waltii   9 9
No Yes Ashbya gossypii ATCC 10895   9 9
No Yes Zygosaccharomyces rouxii   11 11
No Yes Saccharomyces mikatae MIT   17 17
No Yes Saccharomyces paradoxus MIT   19 19
No Yes Saccharomyces cerevisiae 76 Baker's yeast 18 18
No Yes Saccharomyces bayanus MIT   16 16
No Yes Kluyveromyces lactis   13 13
No Yes Schizosaccharomyces cryophilus OY26 22   7 7
No Yes Schizosaccharomyces octosporus yFS286   7 7
No Yes Schizosaccharomyces japonicus yFS275   6 6
No Yes Schizosaccharomyces pombe Fission yeast 6 6
No Yes Catenaria anguillulae PL171 v1.0   16 16
No Yes Allomyces macrogynus ATCC 38327   41 41
No Yes Spizellomyces punctatus DAOM BR117   23 23
No Yes Dictyostelium discoideum   19 19
No Yes Dictyostelium purpureum   11 11
No Yes Entamoeba dispar 1.2   2 2
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   4 4
No Yes Selaginella moellendorffii   41 41
No Yes Pinus taeda Loblolly pine 29 28
No Yes Picea abies Norway spruce 40 40
No Yes Eucalyptus grandis v201 Rose gum 88 88
No Yes Theobroma cacao B97-61/B2 v1 Cacao 51 51
No Yes Gossypium raimondii v221   266 266
No Yes Citrus clementina v165   101 101
No Yes Citrus sinensis v154 Sweet orange 99 99
No Yes Thellungiella halophila v173   88 88
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 132 132
No Yes Capsella rubella v183   86 86
No Yes Arabidopsis lyrata Lyrate rockcress 79 79
No Yes Arabidopsis thaliana 10 Thale cress 125 125
No Yes Carica papaya Papaya 43 43
No Yes Medicago truncatula Barrel medic 120 119
No Yes Phaseolus vulgaris v186 French bean 96 96
No Yes Glycine max v109 Soybean 185 185
No Yes Cucumis sativus v122 Cucumber 117 117
No Yes Fragaria vesca Wild strawberry 51 51
No Yes Malus domestica v196 Apple 115 114
No Yes Prunus persica v139 Peach 48 48
No Yes Linum usitatissimum v200 Flax 101 101
No Yes Manihot esculenta v147 Cassava 89 89
No Yes Populus trichocarpa v156 Black cottonwood 100 100
No Yes Vitis vinifera Wine grape 47 47
No Yes Mimulus guttatus v140 Spotted monkey flower 62 62
No Yes Solanum lycopersicum v.2.3 Tomato 69 69
No Yes Solanum tuberosum Potato 94 94
No Yes Actinidia chinensis Hongyang   82 82
No Yes Aquilegia coerulea v195   84 84
No Yes Triticum urartu 22   62 62
No Yes Triticum aestivum 22 Bread wheat 173 173
No Yes Aegilops tauschii 22   64 64
No Yes Brachypodium distachyon Stiff brome 92 92
No Yes Oryza barthii 22 African wild rice 117 117
No Yes Oryza meridionalis 22   107 107
No Yes Oryza glumaepatula 22   111 111
No Yes Oryza glaberrima African rice 68 68
No Yes Oryza punctata 22   125 124
No Yes Oryza nivara 22   128 128
No Yes Oryza brachyantha 22 Malo sina 80 80
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 135 135
No Yes Oryza sativa v193 Rice 135 135
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 101 101
No Yes Panicum virgatum v202 Switchgrass 182 182
No Yes Setaria italica v164 Foxtail millet 101 101
No Yes Zea mays subsp. mays Maize 178 178
No Yes Zea mays v181 Maize 201 201
No Yes Sorghum bicolor Sorghum 86 86
No Yes Musa balbisiana Balbis banana 126 126
No Yes Musa acuminata 22 Wild Malaysian banana 135 135
No Yes Amborella trichopoda 22   36 36
No Yes Physcomitrella patens   39 39
No Yes Coccomyxa subellipsoidea sp. C-169 v2   31 31
No Yes Asterochloris sp. Cgr/DA1pho v1.0   11 11
No Yes Chlorella variabilis sp. NC64A   13 13
No Yes Chlorella vulgaris   29 29
No Yes Volvox carteri f. nagariensis   20 20
No Yes Volvox carteri v199   15 15
No Yes Chlamydomonas reinhardtii 4.0   18 18
No Yes Ostreococcus sp. RCC809   8 8
No Yes Ostreococcus lucimarinus CCE9901   10 10
No Yes Ostreococcus tauri   6 6
No Yes Bathycoccus prasinos   5 5
No Yes Micromonas sp. RCC299   11 11
No Yes Micromonas pusilla CCMP1545 v3.0   10 10
No Yes Cyanidioschyzon merolae strain 10D 22   3 3
No Yes Cyanidioschyzon merolae   3 3
No Yes Porphyridium purpureum 02_2012   21 21
No Yes Thecamonas trahens ATCC 50062   5 5
No Yes Bigelowiella natans CCMP2755 22   8 8
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   16 16
No Yes Ectocarpus siliculosus   16 15
No Yes Aureococcus anophagefferens   4 4
No Yes Albugo laibachii 22   16 15
No Yes Pythium iwayamai DAOM BR242034 22   14 14
No Yes Pythium arrhenomanes ATCC 12531 22   17 16
No Yes Pythium ultimum v1.7-2   24 22
No Yes Pythium aphanidermatum DAOM BR444 22   16 16
No Yes Pythium irregulare DAOM BR486 22   21 20
No Yes Pythium vexans DAOM BR484 22   21 19
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 23 22
No Yes Phytophthora sojae 1.1   22 20
No Yes Phytophthora infestans T30-4   20 19
No Yes Phytophthora capsici   18 17
No Yes Hyaloperonospora arabidopsidis 22   19 18
No Yes Phaeodactylum tricornutumCCAP 1055/1   18 16
No Yes Fragilariopsis cylindrus   31 29
No Yes Thalassiosira pseudonana CCMP1335   17 16
No Yes Perkinsus marinus ATCC 50983   1 1
No Yes Paramecium tetraurelia   61 61
No Yes Tetrahymena thermophila SB210 1   9 9
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Naegleria gruberi   3 3
No Yes Trichomonas vaginalis   3 3
No Yes Guillardia theta CCMP2712 v1.0   15 15
No Yes Emiliania huxleyi CCMP1516   6 6
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 98 98
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 49 49
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 25 25
No Yes Ascaris suum Victoria/Ghent Pig roundworm 20 20
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 45 44
No Yes Cryptococcus neoformans var. grubii H99   17 17
No Yes Cryptococcus neoformans B-3501A   17 17
No Yes Cryptococcus neoformans JEC21   16 16
No Yes Paracoccidioides brasiliensis Pb01   17 17
No Yes Paracoccidioides brasiliensis Pb03   18 18
No Yes Coccidioides posadasii str. Silveira   17 17
No Yes Coccidioides immitis RMSCC 3703   16 16
No Yes Coccidioides immitis RMSCC 2394   18 18
No Yes Coccidioides immitis H538.4   17 17
No Yes Ajellomyces dermatitidis ER-3   18 18
No Yes Histoplasma capsulatum H143   13 13
No Yes Histoplasma capsulatum H88   17 17
No Yes Histoplasma capsulatum G186AR   19 19
No Yes Aspergillus fumigatus A1163   24 24
No Yes Candida albicans WO-1   10 10
No Yes Saccharomyces cerevisiae UC5   16 16
No Yes Saccharomyces cerevisiae PW5   16 16
No Yes Saccharomyces cerevisiae FL100   8 8
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   8 8
No Yes Saccharomyces cerevisiae CBS7960   14 14
No Yes Saccharomyces cerevisiae YJM269   13 13
No Yes Saccharomyces cerevisiae T7   18 18
No Yes Saccharomyces cerevisiae FostersB   12 12
No Yes Saccharomyces cerevisiae FostersO   9 9
No Yes Saccharomyces cerevisiae VL3   15 15
No Yes Saccharomyces cerevisiae Vin13   15 15
No Yes Saccharomyces cerevisiae LalvinQA23   15 15
No Yes Saccharomyces cerevisiae AWRI796   14 14
No Yes Saccharomyces cerevisiae Sigma1278b   17 17
No Yes Saccharomyces cerevisiae W303   18 18
No Yes Saccharomyces cerevisiae JAY291   17 17
No Yes Saccharomyces cerevisiae AWRI1631   10 10
No Yes Saccharomyces cerevisiae YPS163   7 7
No Yes Saccharomyces cerevisiae M22   4 4
No Yes Saccharomyces cerevisiae T73   6 6
No Yes Saccharomyces cerevisiae CLIB215   13 13
No Yes Saccharomyces cerevisiae Y10   8 8
No Yes Saccharomyces cerevisiae YJM789   18 18
No Yes Saccharomyces cerevisiae YJM789   18 18
No Yes Saccharomyces cerevisiae RM11-1a   18 18
No Yes Saccharomyces cerevisiae RM11-1a   18 18
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 18 18
No Yes Schizosaccharomyces pombe 972h-   6 6
No Yes Batrachochytrium dendrobatidis JEL423   12 12
No Yes Batrachochytrium dendrobatidis JAM81   14 14
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 51 51
No Yes Hordeum vulgare 22 Domesticated barley 146 146
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 94 94
No Yes Homo sapiens 75_37 (old version GRC) Human 198 198
No Yes Homo sapiens (NCBI version) Human 100 100
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 52 52
No Yes Heliconius numata (Incomplete)   8 8
No Yes Loa loa v3.3 (Request) Eye worm 16 16
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 14 14
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 16 15
No Yes Moniliophthora perniciosa FA553 (Genome survey)   7 7
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 3 3
No Yes Lotus japonicus (Early assembly)   45 45
No Yes Malus x domestica (Duplicate) Apple 115 114
No Yes Ricinus communis (Early assembly) Castor bean 51 51
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   124 122
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 67 67
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 69 69
No Yes Phoenix dactylifera (Early draft) Date palm 38 38
No Yes Homo sapiens 69_37 Human 56 56
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 49 49
No Yes Gorilla gorilla 69_3.1 Western gorilla 53 53
No Yes Pongo abelii 69_2 Sumatran orangutan 46 46
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 44 44
No Yes Macaca mulatta 69_1 Rhesus monkey 48 48
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 48 48
No Yes Otolemur garnettii 69_3 Small-eared galago 48 48
No Yes Microcebus murinus 69_1 Gray mouse lemur 34 34
No Yes Rattus norvegicus 69_3.4 Norway rat 50 50
No Yes Mus musculus 69_38 House mouse 52 52
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 30 30
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 44 44
No Yes Cavia porcellus 69_3 Domestic guinea pig 50 50
No Yes Oryctolagus cuniculus 69_2 Rabbit 41 41
No Yes Ochotona princeps 69 American pika 30 30
No Yes Tupaia belangeri 69 Northern tree shrew 30 30
No Yes Sus scrofa 69_10.2 Pig 42 42
No Yes Bos taurus 69_3.1 Cattle 48 48
No Yes Vicugna pacos 69_1 Alpaca 20 20
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 38 38
No Yes Mustela putorius furo 69_1.0 Domestic ferret 50 50
No Yes Ailuropoda melanoleuca 69_1 Giant panda 48 48
No Yes Canis familiaris 69_3.1 Dog 51 51
No Yes Felis catus 69 Domestic cat 24 24
No Yes Equus caballus 69_2 Horse 42 42
No Yes Myotis lucifugus 69_2.0 Little brown bat 46 46
No Yes Pteropus vampyrus 69_1 Large flying fox 44 44
No Yes Sorex araneus 69_1 European shrew 22 22
No Yes Erinaceus europaeus 69 Western European hedgehog 21 21
No Yes Procavia capensis 69_1 Cape rock hyrax 32 32
No Yes Loxodonta africana 69_3 African savanna elephant 46 46
No Yes Echinops telfairi 69 Small Madagascar hedgehog 22 22
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 31 31
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 21 21
No Yes Macropus eugenii 69_1.0 Tammar wallaby 30 30
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 40 40
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 43 43
No Yes Ornithorhynchus anatinus 69_5 Platypus 35 35
No Yes Petromyzon marinus 69_7.0 Sea lamprey 20 20
No Yes Meleagris gallopavo 69_2 Turkey 30 30
No Yes Gallus gallus 69_2 Chicken 35 35
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 38 38
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 40 40
No Yes Anolis carolinensis 69_2.0 Green anole 41 41
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 48 48
No Yes Latimeria chalumnae 69_1 Coelacanth 49 49
No Yes Gadus morhua 69_1 Atlantic cod 54 54
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 60 60
No Yes Takifugu rubripes 69_4 Torafugu 59 58
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 57 57
No Yes Oryzias latipes 69_1 Japanese medaka 54 54
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 68 68
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 71 71
No Yes Danio rerio 69_9 Zebrafish 75 75
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 17 17
No Yes Ciona intestinalis 69 Vase tunicate 22 22
No Yes Drosophila melanogaster 69_5 Fruit fly 17 17
No Yes Caenorhabditis elegans 69_215 Roundworm 24 23
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 18 18
No Yes Arabidopsis thaliana 10 Thale cress 74 74
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   45288 45217
No Yes Protozoadb 2010_08 (Protozoadb)   23 23
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   3177 3164
No Yes Uniprot 2018_03 genome   43418 43270
No Yes Global Ocean Sampling Expedition (GOS)   33 32
No Yes NCBI viral sequences (Viral)   9 9
No Yes PDB chains (SCOP 1.75) (PDB)   97 97
No Yes Protein Data Bank (all PDB sequenc)   737 662
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   556 499
No Yes TargetDB (Targets)   90 89
No Yes UniProt viral sequences (Viral)   79 79

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