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SNARE fusion complex superfamily domain assignments
in
Coniophora puteana

Assignment details

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Coniophora puteana has 12 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Conpu1|101153|estExt_Genewise1.C_4_t10411   0.000089   173-222   SNARE fusion complex  
jgi|Conpu1|115278|estExt_Genewise1Plus.C_1_t40124   9.16e-17   121-192   SNARE fusion complex  
  0.00000000000000188   284-356   SNARE fusion complex  
jgi|Conpu1|131789|estExt_Genewise1Plus.C_16_t10242   1.26e-21   126-190   SNARE fusion complex  
jgi|Conpu1|136895|estExt_fgenesh1_pm.C_5_t10440   0.0000634   299-359   SNARE fusion complex  
jgi|Conpu1|137006|estExt_fgenesh1_pm.C_5_t20071   0.000000000000251   136-199   SNARE fusion complex  
jgi|Conpu1|139934|estExt_fgenesh1_pm.C_150143   4.92e-19   133-197   SNARE fusion complex  
jgi|Conpu1|140086|estExt_fgenesh1_pm.C_160157   9.81e-16   125-192   SNARE fusion complex  
jgi|Conpu1|158988|gm1.10979_g   0.000000000012   9-70   SNARE fusion complex  
jgi|Conpu1|169405|estExt_Genemark1.C_160212   2.88e-22   26-92   SNARE fusion complex  
jgi|Conpu1|78857|fgenesh1_kg.1_#_335_#_isotig11623   0.0000000000227   42-107   SNARE fusion complex  
jgi|Conpu1|89827|fgenesh1_pm.5_#_459   0.00000000000000266   142-201   SNARE fusion complex  
 
Weak hits:
jgi|Conpu1|147899|estExt_fgenesh1_pg.C_220016   0.0959   203-245   SNARE fusion complex  
jgi|Conpu1|152221|gm1.4212_g   0.0458   186-243   SNARE fusion complex  

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Select to display   Genome       Domains   Proteins
No Yes ALL   84453 84453
No Yes Homo sapiens 76_38 Human 115 105
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 31 26
No Yes Gorilla gorilla 76_3.1 Western gorilla 37 33
No Yes Pongo abelii 76_2 Sumatran orangutan 28 23
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 31 27
No Yes Papio anubis 76 Olive baboon 37 32
No Yes Macaca mulatta 76_1 Rhesus monkey 54 48
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 55 51
No Yes Otolemur garnettii 76_3 Small-eared galago 29 26
No Yes Microcebus murinus 76_1 Gray mouse lemur 22 20
No Yes Rattus norvegicus 76_5.0 Norway rat 34 30
No Yes Mus musculus 76_38 House mouse 64 57
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 25 22
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 28 24
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 41 35
No Yes Cavia porcellus 76_3 Domestic guinea pig 31 27
No Yes Oryctolagus cuniculus 76_2 Rabbit 35 30
No Yes Ochotona princeps 76 American pika 21 19
No Yes Tupaia belangeri 76 Northern tree shrew 19 18
No Yes Sus scrofa 76_10.2 Pig 31 27
No Yes Bos taurus 76_3.1 Cattle 28 24
No Yes Ovis aries 76_3.1 Sheep 38 34
No Yes Vicugna pacos 76_1 Alpaca 19 16
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 25 23
No Yes Mustela putorius furo 76_1.0 Domestic ferret 33 29
No Yes Ailuropoda melanoleuca 76_1 Giant panda 32 29
No Yes Canis familiaris 76_3.1 Dog 43 37
No Yes Felis catus 76_6.2 Domestic cat 31 27
No Yes Equus caballus 76_2 Horse 30 26
No Yes Myotis lucifugus 76_2.0 Little brown bat 30 25
No Yes Pteropus vampyrus 76_1 Large flying fox 28 25
No Yes Sorex araneus 76_1 European shrew 15 13
No Yes Erinaceus europaeus 76 Western European hedgehog 18 15
No Yes Procavia capensis 76_1 Cape rock hyrax 26 23
No Yes Loxodonta africana 76_3 African savanna elephant 37 33
No Yes Echinops telfairi 76 Small Madagascar hedgehog 21 18
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 39 34
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 23 19
No Yes Macropus eugenii 76_1.0 Tammar wallaby 20 18
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 29 25
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 33 29
No Yes Ornithorhynchus anatinus 76_5 Platypus 26 22
No Yes Saccoglossus kowalevskii v3.0   27 24
No Yes Petromyzon marinus 76_7.0 Sea lamprey 26 20
No Yes Meleagris gallopavo 76_2 Turkey 30 25
No Yes Gallus gallus 76_4 Chicken 27 23
No Yes Anas platyrhynchos 76_1.0 Mallard 29 25
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 31 26
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 30 26
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 36 31
No Yes Anolis carolinensis 76_2.0 Green anole 39 33
No Yes Xenopus laevis African clawed frog 91 77
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 36 31
No Yes Latimeria chalumnae 76_1 Coelacanth 40 35
No Yes Lepisosteus oculatus 76 Spotted gar 42 36
No Yes Gadus morhua 76_1 Atlantic cod 34 29
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 38 32
No Yes Takifugu rubripes 76_4 Torafugu 69 55
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 52 42
No Yes Oryzias latipes 76_1 Japanese medaka 43 34
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 35 31
No Yes Poecilia formosa 76 Amazon molly 43 36
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 48 39
No Yes Astyanax mexicanus 76 Mexican tetra 38 32
No Yes Danio rerio 76_9 Zebrafish 77 65
No Yes Oikopleura dioica   21 17
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 22 21
No Yes Ciona intestinalis 76 Vase tunicate 21 19
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 26 23
No Yes Adineta vaga   68 61
No Yes Octopus bimaculoides 280   25 22
No Yes Crassostrea gigas 22 Pacific oyster 30 25
No Yes Lottia gigantea Owl limpet 22 19
No Yes Helobdella robusta   26 23
No Yes Capitella sp. I   21 19
No Yes Danaus plexippus OGS1.0 Monarch butterfly 20 17
No Yes Heliconius melpomene Postman butterfly 12 10
No Yes Bombyx mori Domestic silkworm 13 12
No Yes Nasonia vitripennis Jewel wasp 13 11
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 35 32
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 20 18
No Yes Linepithema humile v1.1 Argentine ant 20 18
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 20 19
No Yes Solenopsis invicta v.2.2.3 Red fire ant 17 14
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 18 17
No Yes Atta cephalotes v1.1   18 17
No Yes Camponotus floridanus v3.3 Florida carpenter ant 26 21
No Yes Lucilia cuprina Australian sheep blowfly 22 16
No Yes Drosophila grimshawi 1.3   21 18
No Yes Drosophila willistoni 1.3   20 17
No Yes Drosophila pseudoobscura 2.13   20 18
No Yes Drosophila persimilis 1.3   20 17
No Yes Drosophila suzukii   18 15
No Yes Drosophila yakuba 1.3   21 18
No Yes Drosophila simulans 1.3   15 14
No Yes Drosophila sechellia 1.3   18 17
No Yes Drosophila melanogaster 76_5 Fruit fly 64 60
No Yes Drosophila erecta 1.3   19 16
No Yes Drosophila ananassae 1.3   18 16
No Yes Drosophila virilis 1.2   20 17
No Yes Drosophila mojavensis 1.3   20 17
No Yes Megaselia scalaris 22   7 7
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 16 14
No Yes Culex pipiens quinquefasciatus Southern house mosquito 19 17
No Yes Anopheles darlingi 22 American malaria mosquito 15 14
No Yes Anopheles gambiae 49_3j African malaria mosquito 22 20
No Yes Tribolium castaneum 3.0 Red flour beetle 18 16
No Yes Pediculus humanus corporis (Early assembly) Human body louse 15 13
No Yes Acyrthosiphon pisum Pea aphid 20 17
No Yes Rhodnius prolixus 22   19 16
No Yes Daphnia pulex Common water flea 24 22
No Yes Strigamia maritima 22   24 20
No Yes Sarcoptes scabiei   15 13
No Yes Tetranychus urticae Two-spotted spider mite 18 15
No Yes Ixodes scapularis (Preliminary) Black-legged tick 18 17
No Yes Pristionchus pacificus   19 13
No Yes Meloidogyne incognita Southern root-knot nematode 24 21
No Yes Meloidogyne hapla   12 10
No Yes Onchocerca volvulus 22   16 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 18 16
No Yes Caenorhabditis japonica   17 15
No Yes Caenorhabditis brenneri   19 16
No Yes Caenorhabditis remanei   18 15
No Yes Caenorhabditis elegans 76_235 Roundworm 26 22
No Yes Caenorhabditis briggsae 2   19 17
No Yes Trichinella spiralis 22   12 10
No Yes Hymenolepis microstoma   17 14
No Yes Echinococcus multilocularis   16 13
No Yes Echinococcus granulosus   16 13
No Yes Taenia solium Pork tapeworm 16 14
No Yes Schistosoma mansoni   26 22
No Yes Mnemiopsis leidyi Sea walnut 18 16
No Yes Thelohanellus kitauei   7 5
No Yes Acropora digitifera v1.0   17 16
No Yes Nematostella vectensis 1.0 Starlet sea anemone 24 21
No Yes Hydra vulgaris   17 14
No Yes Amphimedon queenslandica   24 22
No Yes Trichoplax adhaerens   23 21
No Yes Proterospongia sp. ATCC 50818   15 15
No Yes Monosiga brevicollis   11 11
No Yes Sphaeroforma arctica JP610   19 18
No Yes Capsaspora owczarzaki ATCC 30864   17 15
No Yes Conidiobolus coronatus NRRL28638 v1.0   13 11
No Yes Mortierella verticillata NRRL 6337   17 16
No Yes Phycomyces blakesleeanus   11 11
No Yes Rhizopus oryzae RA 99-880   13 12
No Yes Mucor circinelloides   13 12
No Yes Rhizomucor miehei CAU432   13 12
No Yes Malassezia globosa CBS 7966   18 16
No Yes Sporisorium reilianum 22   12 11
No Yes Ustilago maydis   12 11
No Yes Mixia osmundae IAM 14324 v1.0   13 12
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   14 13
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   18 16
No Yes Melampsora laricis-populina   13 12
No Yes Rhodotorula graminis WP1 v1.0   13 12
No Yes Sporobolomyces roseus IAM 13481   9 8
No Yes Microbotryum violaceum 22   14 13
No Yes Wallemia sebi v1.0   9 8
No Yes Sphaerobolus stellatus v1.0   16 16
No Yes Piloderma croceum F 1598 v1.0   14 13
No Yes Serpula lacrymans var. lacrymans S7.9   12 11
No Yes Coniophora puteana   12 11
No Yes Hydnomerulius pinastri v2.0   15 13
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   13 12
No Yes Pisolithus microcarpus 441 v1.0   13 12
No Yes Pisolithus tinctorius Marx 270 v1.0   11 10
No Yes Scleroderma citrinum Foug A v1.0   13 12
No Yes Coprinopsis cinerea okayama7 130 v3   14 13
No Yes Pleurotus ostreatus Oyster mushroom 13 12
No Yes Amanita thiersii Skay4041 v1.0   14 13
No Yes Amanita muscaria Koide v1.0 Fly agaric 14 13
No Yes Galerina marginata v1.0   14 13
No Yes Hebeloma cylindrosporum h7 v2.0   13 12
No Yes Laccaria bicolor S238N-H82   14 13
No Yes Agaricus bisporus var. bisporus   13 12
No Yes Schizophyllum commune   17 15
No Yes Stereum hirsutum FP-91666 SS1 v1.0   13 12
No Yes Heterobasidion annosum   12 11
No Yes Gloeophyllum trabeumv1.0   13 12
No Yes Punctularia strigosozonata v1.0   12 11
No Yes Sebacina vermifera MAFF 305830 v1.0   16 15
No Yes Fomitiporia mediterranea v1.0   13 12
No Yes Tulasnella calospora AL13/4D v1.0   13 13
No Yes Postia placenta   20 19
No Yes Wolfiporia cocos MD-104 SS10 v1.0   14 13
No Yes Fomitopsis pinicolav1.0   12 11
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   12 11
No Yes Phanerochaete chrysosporium RP-78 2.1   11 10
No Yes Dichomitus squalens   14 13
No Yes Trametes versicolor v1.0   13 12
No Yes Tremella mesenterica Witches' butter 12 11
No Yes Daldinia eschscholzii EC12 v1.0   13 12
No Yes Apiospora montagnei NRRL 25634 v1.0   13 12
No Yes Magnaporthe poae ATCC 64411 22   8 8
No Yes Magnaporthe grisea 70-15   11 11
No Yes Podospora anserina   10 10
No Yes Sporotrichum thermophile ATCC 42464   11 11
No Yes Thielavia terrestris NRRL 8126   12 11
No Yes Chaetomium globosum CBS 148.51   10 10
No Yes Neurospora tetrasperma   11 11
No Yes Neurospora discreta FGSC 8579   11 11
No Yes Neurospora crassa OR74A   11 11
No Yes Cryphonectria parasitica Chestnut blight fungus 10 10
No Yes Verticillium albo-atrum VaMs.102   9 9
No Yes Verticillium dahliae VdLs.17   11 10
No Yes Acremonium alcalophilumv 1.0   11 11
No Yes Glomerella graminicola 22   13 12
No Yes Fusarium graminearum   13 12
No Yes Nectria haematococca mpVI   14 13
No Yes Fusarium oxysporum f. sp. lycopersici 4286   13 12
No Yes Fusarium verticillioides 7600   13 12
No Yes Trichoderma asperellum CBS 433.97 v1.0   13 12
No Yes Trichoderma atroviride   13 12
No Yes Trichoderma citrinoviride v1.0   14 13
No Yes Trichoderma reesei 1.2   13 12
No Yes Trichoderma virens Gv29-8   13 12
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   12 11
No Yes Trichoderma harzianum CBS 226.95 v1.0   13 12
No Yes Amorphotheca resinae v1.0 Creosote fungus 14 13
No Yes Botrytis cinerea B05.10   13 12
No Yes Sclerotinia sclerotiorum   14 13
No Yes Blumeria graminis 22   12 11
No Yes Didymella exigua CBS 183.55 v1.0   14 13
No Yes Leptosphaeria maculans 22   14 13
No Yes Setosphaeria turcica v1.0   14 13
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   13 12
No Yes Cochliobolus victoriae FI3 v1.0   13 12
No Yes Cochliobolus carbonum 26-R-13 v1.0   13 12
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 13 12
No Yes Alternaria brassicicola   9 9
No Yes Cochliobolus lunatus m118 v2.0   13 12
No Yes Pyrenophora teres f. teres 22   12 11
No Yes Pyrenophora tritici-repentis   13 12
No Yes Stagonospora nodorum   14 13
No Yes Mycosphaerella graminicola IPO323   13 12
No Yes Zasmidium cellare ATCC 36951 v1.0   13 12
No Yes Dothistroma septosporum   13 12
No Yes Septoria musiva v1.0   14 13
No Yes Mycosphaerella fijiensis CIRAD86   14 13
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   13 12
No Yes Paracoccidioides brasiliensis Pb18   11 11
No Yes Coccidioides posadasii RMSCC 3488   13 12
No Yes Coccidioides immitis RS   14 13
No Yes Ajellomyces dermatitidis SLH14081   12 11
No Yes Histoplasma capsulatum class NAmI strain WU24   11 10
No Yes Microsporum canis CBS 113480   13 12
No Yes Trichophyton equinum CBS 127.97   13 12
No Yes Trichophyton verrucosum HKI 0517   11 10
No Yes Arthroderma benhamiae CBS 112371   11 10
No Yes Trichophyton tonsurans CBS 112818   14 13
No Yes Trichophyton rubrum CBS 118892   14 13
No Yes Uncinocarpus reesii 1704   9 8
No Yes Aspergillus zonatus v1.0   12 11
No Yes Penicillium chrysogenum Wisconsin 54-1255   12 11
No Yes Penicillium chrysogenum v1.0   13 12
No Yes Aspergillus acidus v1.0   14 13
No Yes Aspergillus fumigatus Af293   11 10
No Yes Aspergillus brasiliensis v1.0   14 13
No Yes Aspergillus nidulans FGSC A4   13 12
No Yes Aspergillus sydowii v1.0   13 12
No Yes Aspergillus versicolor v1.0   14 13
No Yes Aspergillus glaucus   14 13
No Yes Aspergillus carbonarius ITEM 5010   13 12
No Yes Neosartorya fischeri NRRL 181   14 13
No Yes Aspergillus terreus NIH2624   11 10
No Yes Aspergillus tubingensis v1.0   13 12
No Yes Aspergillus wentii v1.0   14 13
No Yes Aspergillus oryzae RIB40   11 11
No Yes Aspergillus niger 22   13 12
No Yes Aspergillus niger ATCC 1015   4 4
No Yes Aspergillus flavus NRRL3357   12 11
No Yes Aspergillus clavatus NRRL 1   14 13
No Yes Penicillium marneffei ATCC 18224   17 16
No Yes Tuber melanosporum Mel28 22   12 11
No Yes Tuber melanosporum Vittad Perigord truffle 13 12
No Yes Hansenula polymorpha v2.0   12 11
No Yes Dekkera bruxellensis CBS 2499 v2.0   13 12
No Yes Pichia membranifaciensv1.0   13 12
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   11 10
No Yes Candida dubliniensis CD36   11 10
No Yes Candida tropicalis MYA-3404   11 10
No Yes Candida parapsilosis   11 10
No Yes Candida albicans SC5314   11 10
No Yes Lodderomyces elongisporus NRRL YB-4239   12 11
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   14 12
No Yes Pichia stipitis CBS 6054   14 12
No Yes Candida guilliermondii ATCC 6260   11 10
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   11 10
No Yes Debaromyces hansenii   12 11
No Yes Wickerhamomyces anomalus   10 9
No Yes Pichia pastoris GS115   11 10
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   8 8
No Yes Yarrowia lipolytica CLIB122   13 12
No Yes Candida lusitaniae ATCC 42720   10 9
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   11 10
No Yes Vanderwaltozyma polyspora DSM 70294   15 13
No Yes Candida glabrata CBS138   14 13
No Yes Kluyveromyces thermotolerans CBS 6340   12 11
No Yes Lachancea kluyveri   13 12
No Yes Kluyveromyces waltii   11 10
No Yes Ashbya gossypii ATCC 10895   13 12
No Yes Zygosaccharomyces rouxii   12 11
No Yes Saccharomyces mikatae MIT   16 14
No Yes Saccharomyces paradoxus MIT   15 13
No Yes Saccharomyces cerevisiae 76 Baker's yeast 17 15
No Yes Saccharomyces bayanus MIT   14 13
No Yes Kluyveromyces lactis   13 12
No Yes Schizosaccharomyces cryophilus OY26 22   10 9
No Yes Schizosaccharomyces octosporus yFS286   10 9
No Yes Schizosaccharomyces japonicus yFS275   10 9
No Yes Schizosaccharomyces pombe Fission yeast 10 9
No Yes Catenaria anguillulae PL171 v1.0   29 27
No Yes Allomyces macrogynus ATCC 38327   35 32
No Yes Spizellomyces punctatus DAOM BR117   21 18
No Yes Dictyostelium discoideum   25 23
No Yes Dictyostelium purpureum   27 24
No Yes Entamoeba dispar 1.2   27 27
No Yes Entamoeba invadens 1.2   20 20
No Yes Entamoeba histolytica 1   26 26
No Yes Selaginella moellendorffii   48 44
No Yes Pinus taeda Loblolly pine 22 20
No Yes Picea abies Norway spruce 14 12
No Yes Eucalyptus grandis v201 Rose gum 68 61
No Yes Theobroma cacao B97-61/B2 v1 Cacao 33 31
No Yes Gossypium raimondii v221   158 149
No Yes Citrus clementina v165   43 41
No Yes Citrus sinensis v154 Sweet orange 55 53
No Yes Thellungiella halophila v173   48 44
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 70 63
No Yes Capsella rubella v183   39 36
No Yes Arabidopsis lyrata Lyrate rockcress 42 39
No Yes Arabidopsis thaliana 10 Thale cress 59 56
No Yes Carica papaya Papaya 29 27
No Yes Medicago truncatula Barrel medic 60 56
No Yes Phaseolus vulgaris v186 French bean 52 46
No Yes Glycine max v109 Soybean 105 97
No Yes Cucumis sativus v122 Cucumber 53 50
No Yes Fragaria vesca Wild strawberry 29 27
No Yes Malus domestica v196 Apple 65 61
No Yes Prunus persica v139 Peach 34 33
No Yes Linum usitatissimum v200 Flax 80 73
No Yes Manihot esculenta v147 Cassava 59 55
No Yes Populus trichocarpa v156 Black cottonwood 60 56
No Yes Vitis vinifera Wine grape 31 30
No Yes Mimulus guttatus v140 Spotted monkey flower 42 39
No Yes Solanum lycopersicum v.2.3 Tomato 34 31
No Yes Solanum tuberosum Potato 60 56
No Yes Actinidia chinensis Hongyang   45 39
No Yes Aquilegia coerulea v195   57 55
No Yes Triticum urartu 22   32 29
No Yes Triticum aestivum 22 Bread wheat 110 102
No Yes Aegilops tauschii 22   34 28
No Yes Brachypodium distachyon Stiff brome 58 52
No Yes Oryza barthii 22 African wild rice 56 52
No Yes Oryza meridionalis 22   47 42
No Yes Oryza glumaepatula 22   51 46
No Yes Oryza glaberrima African rice 38 35
No Yes Oryza punctata 22   64 60
No Yes Oryza nivara 22   54 50
No Yes Oryza brachyantha 22 Malo sina 37 34
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 71 61
No Yes Oryza sativa v193 Rice 71 61
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 41 38
No Yes Panicum virgatum v202 Switchgrass 82 74
No Yes Setaria italica v164 Foxtail millet 45 42
No Yes Zea mays subsp. mays Maize 66 62
No Yes Zea mays v181 Maize 78 73
No Yes Sorghum bicolor Sorghum 37 33
No Yes Musa balbisiana Balbis banana 43 40
No Yes Musa acuminata 22 Wild Malaysian banana 50 47
No Yes Amborella trichopoda 22   22 21
No Yes Physcomitrella patens   35 33
No Yes Coccomyxa subellipsoidea sp. C-169 v2   15 14
No Yes Asterochloris sp. Cgr/DA1pho v1.0   14 13
No Yes Chlorella variabilis sp. NC64A   16 14
No Yes Chlorella vulgaris   15 14
No Yes Volvox carteri f. nagariensis   16 15
No Yes Volvox carteri v199   16 16
No Yes Chlamydomonas reinhardtii 4.0   23 22
No Yes Ostreococcus sp. RCC809   13 13
No Yes Ostreococcus lucimarinus CCE9901   14 14
No Yes Ostreococcus tauri   13 13
No Yes Bathycoccus prasinos   14 14
No Yes Micromonas sp. RCC299   15 15
No Yes Micromonas pusilla CCMP1545 v3.0   15 15
No Yes Cyanidioschyzon merolae strain 10D 22   9 9
No Yes Cyanidioschyzon merolae   8 8
No Yes Porphyridium purpureum 02_2012   13 12
No Yes Thecamonas trahens ATCC 50062   27 26
No Yes Bigelowiella natans CCMP2755 22   32 31
No Yes Giardia lamblia 2.3   5 5
No Yes Cyanophora paradoxa   13 13
No Yes Leishmania mexicana 2.4   20 20
No Yes Leishmania major strain Friedlin   20 20
No Yes Leishmania infantum JPCM5 2.4   19 19
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   20 20
No Yes Trypanosoma vivax   12 12
No Yes Trypanosoma cruzi strain CL Brener   21 20
No Yes Trypanosoma congolense 2.4   13 13
No Yes Trypanosoma brucei gambiense v4.1   18 18
No Yes Trypanosoma brucei TREU927 v4.1   18 18
No Yes Ectocarpus siliculosus   20 20
No Yes Aureococcus anophagefferens   20 20
No Yes Albugo laibachii 22   45 44
No Yes Pythium iwayamai DAOM BR242034 22   25 24
No Yes Pythium arrhenomanes ATCC 12531 22   21 20
No Yes Pythium ultimum v1.7-2   25 24
No Yes Pythium aphanidermatum DAOM BR444 22   25 23
No Yes Pythium irregulare DAOM BR486 22   23 22
No Yes Pythium vexans DAOM BR484 22   26 25
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 22 20
No Yes Phytophthora sojae 1.1   19 19
No Yes Phytophthora infestans T30-4   21 20
No Yes Phytophthora capsici   28 28
No Yes Hyaloperonospora arabidopsidis 22   17 16
No Yes Phaeodactylum tricornutumCCAP 1055/1   20 20
No Yes Fragilariopsis cylindrus   35 32
No Yes Thalassiosira pseudonana CCMP1335   20 20
No Yes Perkinsus marinus ATCC 50983   22 21
No Yes Paramecium tetraurelia   53 52
No Yes Tetrahymena thermophila SB210 1   25 25
No Yes Ichthyophthirius multifiliis strain G5   12 12
No Yes Cryptosporidium hominis   12 11
No Yes Cryptosporidium muris   13 12
No Yes Cryptosporidium parvum Iowa II   12 11
No Yes Neospora caninum   16 15
No Yes Toxoplasma gondii VEG   18 17
No Yes Toxoplasma gondii ME49   17 16
No Yes Toxoplasma gondii GT1   17 16
No Yes Babesia bovis T2Bo   18 18
No Yes Theileria parva   12 12
No Yes Theileria annulata   12 12
No Yes Plasmodium falciparum 3D7   14 13
No Yes Plasmodium vivax SaI-1 7.0   14 13
No Yes Plasmodium knowlesi strain H   15 14
No Yes Plasmodium yoelii ssp. yoelii 1   11 10
No Yes Plasmodium chabaudi   13 12
No Yes Plasmodium berghei ANKA   13 12
No Yes Symbiodinium minutum clade B1 v1.2   22 22
No Yes Naegleria gruberi   32 32
No Yes Trichomonas vaginalis   36 36
No Yes Guillardia theta CCMP2712 v1.0   17 16
No Yes Emiliania huxleyi CCMP1516   39 37
No Yes Pediococcus claussenii ATCC BAA-344   1 1
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Desulfovibrio salexigens DSM 2638   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 76 68
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 57 53
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 33 30
No Yes Ascaris suum Victoria/Ghent Pig roundworm 16 14
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 24 20
No Yes Cryptococcus neoformans var. grubii H99   13 12
No Yes Cryptococcus neoformans B-3501A   10 9
No Yes Cryptococcus neoformans JEC21   10 9
No Yes Paracoccidioides brasiliensis Pb01   11 10
No Yes Paracoccidioides brasiliensis Pb03   12 11
No Yes Coccidioides posadasii str. Silveira   13 12
No Yes Coccidioides immitis RMSCC 3703   14 14
No Yes Coccidioides immitis RMSCC 2394   13 12
No Yes Coccidioides immitis H538.4   12 12
No Yes Ajellomyces dermatitidis ER-3   12 11
No Yes Histoplasma capsulatum H143   11 10
No Yes Histoplasma capsulatum H88   12 11
No Yes Histoplasma capsulatum G186AR   13 12
No Yes Aspergillus fumigatus A1163   12 11
No Yes Candida albicans WO-1   11 10
No Yes Saccharomyces cerevisiae UC5   14 13
No Yes Saccharomyces cerevisiae PW5   17 15
No Yes Saccharomyces cerevisiae FL100   10 9
No Yes Saccharomyces cerevisiae CLIB324   13 12
No Yes Saccharomyces cerevisiae CBS7960   14 13
No Yes Saccharomyces cerevisiae YJM269   16 14
No Yes Saccharomyces cerevisiae T7   17 15
No Yes Saccharomyces cerevisiae FostersB   13 13
No Yes Saccharomyces cerevisiae FostersO   11 11
No Yes Saccharomyces cerevisiae VL3   16 14
No Yes Saccharomyces cerevisiae Vin13   14 12
No Yes Saccharomyces cerevisiae LalvinQA23   13 12
No Yes Saccharomyces cerevisiae AWRI796   14 13
No Yes Saccharomyces cerevisiae Sigma1278b   17 15
No Yes Saccharomyces cerevisiae W303   17 15
No Yes Saccharomyces cerevisiae JAY291   17 15
No Yes Saccharomyces cerevisiae AWRI1631   13 12
No Yes Saccharomyces cerevisiae YPS163   9 8
No Yes Saccharomyces cerevisiae M22   5 5
No Yes Saccharomyces cerevisiae T73   10 8
No Yes Saccharomyces cerevisiae CLIB215   12 11
No Yes Saccharomyces cerevisiae Y10   7 6
No Yes Saccharomyces cerevisiae YJM789   17 15
No Yes Saccharomyces cerevisiae YJM789   17 15
No Yes Saccharomyces cerevisiae RM11-1a   16 14
No Yes Saccharomyces cerevisiae RM11-1a   16 14
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 17 15
No Yes Schizosaccharomyces pombe 972h-   10 9
No Yes Batrachochytrium dendrobatidis JEL423   17 16
No Yes Batrachochytrium dendrobatidis JAM81   18 17
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 32 30
No Yes Hordeum vulgare 22 Domesticated barley 39 35
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 41 38
No Yes Trypanosoma brucei Lister 427 v4.1   18 18
No Yes Neospora caninum Nc-Liverpool 6.2   16 15
No Yes Plasmodium falciparum HB3   12 11
No Yes Plasmodium falciparum Dd2   5 5
No Yes Lactococcus lactis subsp. lactis CV56   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 114 106
No Yes Homo sapiens (NCBI version) Human 44 38
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 30 26
No Yes Heliconius numata (Incomplete)   9 8
No Yes Loa loa v3.3 (Request) Eye worm 15 13
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 14 12
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 13 11
No Yes Moniliophthora perniciosa FA553 (Genome survey)   9 9
No Yes Encephalitozoon intestinalis (endoparasite)   5 5
No Yes Encephalitozoon cuniculi (endoparasite)   4 4
No Yes Picea sitchensis (Incomplete) Sitka spruce 12 12
No Yes Lotus japonicus (Early assembly)   27 26
No Yes Malus x domestica (Duplicate) Apple 65 61
No Yes Ricinus communis (Early assembly) Castor bean 30 28
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   83 74
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 34 31
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 34 31
No Yes Phoenix dactylifera (Early draft) Date palm 27 24
No Yes Homo sapiens 69_37 Human 35 30
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 27 23
No Yes Gorilla gorilla 69_3.1 Western gorilla 29 25
No Yes Pongo abelii 69_2 Sumatran orangutan 27 22
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 30 26
No Yes Macaca mulatta 69_1 Rhesus monkey 34 29
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 32 29
No Yes Otolemur garnettii 69_3 Small-eared galago 29 26
No Yes Microcebus murinus 69_1 Gray mouse lemur 22 20
No Yes Rattus norvegicus 69_3.4 Norway rat 32 29
No Yes Mus musculus 69_38 House mouse 33 28
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 25 22
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 28 24
No Yes Cavia porcellus 69_3 Domestic guinea pig 31 27
No Yes Oryctolagus cuniculus 69_2 Rabbit 34 28
No Yes Ochotona princeps 69 American pika 21 19
No Yes Tupaia belangeri 69 Northern tree shrew 19 18
No Yes Sus scrofa 69_10.2 Pig 30 26
No Yes Bos taurus 69_3.1 Cattle 28 24
No Yes Vicugna pacos 69_1 Alpaca 19 16
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 25 23
No Yes Mustela putorius furo 69_1.0 Domestic ferret 33 29
No Yes Ailuropoda melanoleuca 69_1 Giant panda 29 26
No Yes Canis familiaris 69_3.1 Dog 33 28
No Yes Felis catus 69 Domestic cat 26 23
No Yes Equus caballus 69_2 Horse 30 26
No Yes Myotis lucifugus 69_2.0 Little brown bat 28 24
No Yes Pteropus vampyrus 69_1 Large flying fox 28 25
No Yes Sorex araneus 69_1 European shrew 15 13
No Yes Erinaceus europaeus 69 Western European hedgehog 18 15
No Yes Procavia capensis 69_1 Cape rock hyrax 26 23
No Yes Loxodonta africana 69_3 African savanna elephant 31 27
No Yes Echinops telfairi 69 Small Madagascar hedgehog 21 18
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 20 17
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 23 19
No Yes Macropus eugenii 69_1.0 Tammar wallaby 20 18
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 24 21
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 32 28
No Yes Ornithorhynchus anatinus 69_5 Platypus 22 19
No Yes Petromyzon marinus 69_7.0 Sea lamprey 24 18
No Yes Meleagris gallopavo 69_2 Turkey 28 23
No Yes Gallus gallus 69_2 Chicken 27 23
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 31 26
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 31 26
No Yes Anolis carolinensis 69_2.0 Green anole 36 30
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 29 25
No Yes Latimeria chalumnae 69_1 Coelacanth 32 27
No Yes Gadus morhua 69_1 Atlantic cod 33 28
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 36 30
No Yes Takifugu rubripes 69_4 Torafugu 37 31
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 42 33
No Yes Oryzias latipes 69_1 Japanese medaka 32 27
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 35 31
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 37 30
No Yes Danio rerio 69_9 Zebrafish 44 36
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 13 12
No Yes Ciona intestinalis 69 Vase tunicate 20 18
No Yes Drosophila melanogaster 69_5 Fruit fly 22 18
No Yes Caenorhabditis elegans 69_215 Roundworm 21 18
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 17 15
No Yes Arabidopsis thaliana 10 Thale cress 43 40
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   29327 25996
No Yes Protozoadb 2010_08 (Protozoadb)   563 549
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   2520 2261
No Yes Uniprot 2018_03 genome   30487 27745
No Yes Global Ocean Sampling Expedition (GOS)   76 76
No Yes NCBI viral sequences (Viral)   3 2
No Yes PDB chains (SCOP 1.75) (PDB)   29 29
No Yes Protein Data Bank (all PDB sequenc)   250 242
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   151 151
No Yes TargetDB (Targets)   85 74
No Yes UniProt viral sequences (Viral)   4 3

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