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Type I dockerin domain superfamily domain assignments
in
Eubacterium eligens ATCC 27750

Assignment details

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Eubacterium eligens ATCC 27750 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|238916501|ref|YP_002930018.1|   0.0000000000000245   625-686   Type I dockerin domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   31323 31323
No Yes Amphimedon queenslandica   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   5 5
No Yes Monosiga brevicollis   3 2
No Yes Acholeplasma laidlawii PG-8A   1 1
No Yes Gloeobacter violaceus PCC 7421   6 6
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Clostridium clariflavum DSM 19732   81 79
No Yes Clostridium cellulolyticum H10   62 62
No Yes Clostridium thermocellum ATCC 27405   73 71
No Yes Ruminococcus bromii   27 26
No Yes Ruminococcus albus 7   60 60
No Yes Desulfotomaculum acetoxidans DSM 771   10 10
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   5 5
No Yes Clostridium difficile 630   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Roseburia hominis A2-183   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   72 72
No Yes Clostridium perfringens ATCC 13124   4 4
No Yes Clostridium cellulovorans 743B   45 44
No Yes Clostridium acetobutylicum ATCC 824   10 10
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Paenibacillus sp. JDR-2   8 8
No Yes Paenibacillus mucilaginosus 3016   9 9
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Oceanobacillus iheyensis HTE831   2 2
No Yes Bacillus thuringiensis str. Al Hakam   2 2
No Yes Bacillus cereus 03BB102   2 2
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   7 7
No Yes Haliscomenobacter hydrossis DSM 1100   18 18
No Yes Salinibacter ruber M8   1 1
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Isosphaera pallida ATCC 43644   7 7
No Yes Rhodopirellula baltica SH 1   18 18
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Caldisericum exile AZM16c01   2 2
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfatibacillum alkenivorans AK-01   18 18
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Geobacter daltonii FRC-32   4 4
No Yes Geobacter uraniireducens Rf4   7 7
No Yes Geobacter sulfurreducens KN400   4 4
No Yes Geobacter metallireducens GS-15   1 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   2 2
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Hahella chejuensis KCTC 2396   2 2
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Methylomonas methanica MC09   2 2
No Yes Methanocella conradii HZ254   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   3 3
No Yes Methanosaeta concilii GP6   8 8
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   3 3
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosphaerula palustris E1-9c   36 36
No Yes Methanospirillum hungatei JF-1   4 4
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   8 8
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasmatales archaeon BRNA1   2 2
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Natrialba magadii ATCC 43099   2 2
No Yes Halogeometricum borinquense DSM 11551   2 2
No Yes Haloferax mediterranei ATCC 33500   2 2
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   3 3
No Yes Haloarcula hispanica ATCC 33960   2 2
No Yes Haloarcula marismortui ATCC 43049   4 4
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Methanotorris igneus Kol 5   2 2
No Yes methanocaldococcus infernus ME   3 3
No Yes Methanothermococcus okinawensis IH1   4 4
No Yes Methanococcus aeolicus Nankai-3   3 3
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   1 1
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Cyanothece sp. PCC 7822   3 3
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   7 7
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Clostridium thermocellum DSM 1313   78 76
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Ruminococcus champanellensis 18P13   63 62
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   8 8
No Yes Clostridium perfringens str. 13   3 3
No Yes Clostridium acetobutylicum DSM 1731   10 10
No Yes Clostridium acetobutylicum EA 2018   10 10
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus mucilaginosus KNP414   9 9
No Yes Paenibacillus mucilaginosus K02   8 8
No Yes Bacillus toyonensis BCT-7112   2 2
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   2 2
No Yes Bacillus cereus biovar anthracis str. CI   2 2
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   2 2
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   2 2
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Singulisphaera acidiphila DSM 18658   3 3
No Yes Desulfocapsa sulfexigens DSM 10523   1 1
No Yes Geobacter sulfurreducens PCA   4 4
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   1 1
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   4 4
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   3 3
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   9 9
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Halorhabdus tiamatea SARL4B   7 7
No Yes Haloarcula hispanica N601   2 2
No Yes Methanococcus maripaludis X1   2 2
No Yes Acholeplasma laidlawii PG-8A (duplicate)   1 1
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   135 134
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   97 97
No Yes 4_Deep_abyss (meta-genome)   8 8
No Yes 5_050719P (meta-genome)   142 142
No Yes 5_Below_upper_mesopelagic (meta-genome)   3 3
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes 7_Oxygen_minimum_layer (meta-genome)   12 12
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   3 3
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dump bottom (Dump bottom) (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   15 15
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   15 15
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   11 11
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   58 58
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   33 33
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   13 13
No Yes Human Gut Community Subject 8 (meta-genome)   18 18
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   55 55
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   7 7
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   75 75
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   29 29
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   16 16
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   25 25
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   6 6
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   8 8
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   10 10
No Yes NCBI 2017_08 genome   11161 11071
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   29 29
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   13 13
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   7 7
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   36 36
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   70 70
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   16 16
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   22 22
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   24 24
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   6 6
No Yes STRING v9.0.5 (STRING)   349 346
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   30 30
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   5 5
No Yes Uniprot 2018_03 genome   15933 15737
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   35 35
No Yes Global Ocean Sampling Expedition (GOS)   766 765
No Yes NCBI plasmid sequences (Plasmids)   22 22
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   47 47
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   69 69
No Yes TargetDB (Targets)   46 44

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