SUPERFAMILY 1.75 HMM library and genome assignments server

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LEM domain superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 228 significant domains in 192 proteins.

Showing genomes 1 to 25 of 211
  1 2 3 4 5 6 7 8 9   Next Last

Homo sapiens 76_38 has 26 significant domains in 21 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000261210   2.22e-23   2-54   LEM domain  
  0.0000000000000017   107-155   LEM domain  
ENSP00000266732   1.06e-22   2-54   LEM domain  
  0.00000000000000785   107-155   LEM domain  
ENSP00000293760   0.0000000000235   3-41   LEM domain  
ENSP00000308369   0.00000000000053   10-53   LEM domain  
ENSP00000340251   5.1e-23   2-54   LEM domain  
  0.00000000000000379   107-155   LEM domain  
ENSP00000350686   0.0000000000179   65-117   LEM domain  
ENSP00000356117   0.00000011   1-39   LEM domain  
ENSP00000356119   0.00000000000000314   2-52   LEM domain  
ENSP00000356120   0.00000451   1-28   LEM domain  
ENSP00000356121   0.00000000000000314   2-52   LEM domain  
ENSP00000356122   9.61e-16   2-52   LEM domain  
ENSP00000358850   0.0000608   1-29   LEM domain  
ENSP00000358857   0.000000000000235   3-52   LEM domain  
ENSP00000375801   9.61e-16   2-52   LEM domain  
ENSP00000376773   3.79e-23   2-54   LEM domain  
  0.00000000000000288   107-155   LEM domain  
ENSP00000377971   0.0000000000334   407-456   LEM domain  
ENSP00000398733   0.0000000000019   3-41   LEM domain  
ENSP00000450627   5.89e-23   2-54   LEM domain  
  0.00000000000000445   107-155   LEM domain  
ENSP00000451552   0.00000000000000235   14-62   LEM domain  
ENSP00000478539   0.0000000000235   3-41   LEM domain  
ENSP00000479306   0.00000011   1-39   LEM domain  

Pan troglodytes 76_2.1.4 has 5 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000003180   0.00000000000000314   2-52   LEM domain  
ENSPTRP00000008804   0.00000000000053   10-53   LEM domain  
ENSPTRP00000009055   5.89e-23   2-54   LEM domain  
  0.00000000000000445   107-155   LEM domain  
ENSPTRP00000030842   0.0000000000235   3-41   LEM domain  

Gorilla gorilla 76_3.1 has 12 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000003328   1.44e-22   2-54   LEM domain  
  0.00000000000000785   107-155   LEM domain  
ENSGGOP00000005668   0.0000000053   282-331   LEM domain  
ENSGGOP00000006591   0.00000000000053   10-53   LEM domain  
ENSGGOP00000007945   0.0000000000235   3-41   LEM domain  
ENSGGOP00000009171   0.000000000000235   3-52   LEM domain  
ENSGGOP00000009813   0.0000000000139   4-56   LEM domain  
ENSGGOP00000011766   0.00000000000000314   2-52   LEM domain  
ENSGGOP00000021437   0.00000000000049   10-53   LEM domain  
ENSGGOP00000021575   7.46e-23   2-54   LEM domain  
  0.00000000000000432   99-147   LEM domain  
ENSGGOP00000027542   0.0000000000147   5-57   LEM domain  

Pongo abelii 76_2 has 10 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000000329   0.00000000000000373   2-52   LEM domain  
ENSPPYP00000005392   0.000000000000451   10-53   LEM domain  
ENSPPYP00000005540   7.59e-23   2-54   LEM domain  
  0.00000000000000497   107-155   LEM domain  
ENSPPYP00000005864   0.0000000000275   14-65   LEM domain  
ENSPPYP00000010877   0.0000000628   341-390   LEM domain  
ENSPPYP00000018463   0.0000000000235   3-41   LEM domain  
ENSPPYP00000023362   0.000000000000235   3-52   LEM domain  
ENSPPYP00000024306   5.1e-23   2-54   LEM domain  
  0.00000000000000327   107-155   LEM domain  

Nomascus leucogenys 76_1.0 has 6 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000006925   0.0000000294   209-258   LEM domain  
ENSNLEP00000007217   1.96e-22   2-51   LEM domain  
  0.00000000000000275   107-155   LEM domain  
ENSNLEP00000015080   0.00000000000373   5-56   LEM domain  
ENSNLEP00000017178   0.000000000000235   3-52   LEM domain  
ENSNLEP00000017640   0.00000000000000314   2-52   LEM domain  

Papio anubis 76 has 13 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000000506   0.0000000000147   65-116   LEM domain  
ENSPANP00000001546   0.00000000000569   352-403   LEM domain  
ENSPANP00000001715   0.00000000000126   3-51   LEM domain  
ENSPANP00000002094   0.0000000000147   65-116   LEM domain  
ENSPANP00000002137   0.00000000000053   10-53   LEM domain  
ENSPANP00000002833   0.00000000000000314   2-52   LEM domain  
ENSPANP00000003709   0.00000000000126   3-51   LEM domain  
ENSPANP00000004789   7.85e-23   2-54   LEM domain  
  0.00000000000000484   107-155   LEM domain  
ENSPANP00000005737   8.76e-23   2-54   LEM domain  
  0.00000000000000549   107-155   LEM domain  
ENSPANP00000012243   0.00000000000051   10-53   LEM domain  
ENSPANP00000012453   0.0000000000143   40-80   LEM domain  

Macaca mulatta 76_1 has 13 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000005482   5.89e-16   2-52   LEM domain  
ENSMMUP00000010981   0.0000000000118   47-95   LEM domain  
ENSMMUP00000022204   0.00000000000053   10-53   LEM domain  
ENSMMUP00000028624   0.0000000000171   3-41   LEM domain  
ENSMMUP00000028626   0.0000000000255   3-41   LEM domain  
ENSMMUP00000031242   7.98e-23   2-54   LEM domain  
  0.00000000000000497   107-155   LEM domain  
ENSMMUP00000031245   5.23e-23   2-54   LEM domain  
  0.00000000000000327   107-155   LEM domain  
ENSMMUP00000031249   1.44e-22   2-54   LEM domain  
  0.00000000000000889   107-155   LEM domain  
ENSMMUP00000038163   0.000000294   1-28   LEM domain  
ENSMMUP00000040752   0.00000000000126   3-51   LEM domain  
 
Weak hits:
ENSMMUP00000017989   0.000112   1-28   LEM domain  

Callithrix jacchus 76_3.2.1 has 23 significant domains in 18 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000003787   0.00000000169   9-59   LEM domain  
ENSCJAP00000004403   2.09e-22   2-54   LEM domain  
  0.00000000000000876   107-155   LEM domain  
ENSCJAP00000004414   1.16e-22   2-54   LEM domain  
  0.00000000000000497   107-155   LEM domain  
ENSCJAP00000004416   7.59e-23   2-54   LEM domain  
  0.00000000000000327   107-155   LEM domain  
ENSCJAP00000017733   0.0000000000471   353-401   LEM domain  
ENSCJAP00000021779   0.000000000000155   3-52   LEM domain  
ENSCJAP00000022384   0.0000000000235   3-41   LEM domain  
ENSCJAP00000023825   0.0000000000196   69-121   LEM domain  
ENSCJAP00000023841   0.0000000000194   65-117   LEM domain  
ENSCJAP00000026908   0.00000000000145   10-50   LEM domain  
ENSCJAP00000026914   0.00000000000053   10-53   LEM domain  
ENSCJAP00000031750   0.0000432   1-28   LEM domain  
ENSCJAP00000031752   0.0000000000334   1-43   LEM domain  
ENSCJAP00000031758   0.000000000334   1-42   LEM domain  
ENSCJAP00000031765   0.00000981   1-27   LEM domain  
ENSCJAP00000037130   0.000000000353   3-54   LEM domain  
ENSCJAP00000039549   9.02e-18   35-86   LEM domain  
  0.00000000000366   123-172   LEM domain  
ENSCJAP00000051842   1.16e-22   2-54   LEM domain  
  0.00000000000000497   107-155   LEM domain  
 
Weak hits:
ENSCJAP00000031755   0.000275   1-28   LEM domain  

Otolemur garnettii 76_3 has 5 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000005956   0.0000000000373   66-116   LEM domain  
ENSOGAP00000010932   1.44e-22   2-54   LEM domain  
  0.0000000000000105   108-155   LEM domain  
ENSOGAP00000017161   0.0000000000196   3-41   LEM domain  
ENSOGAP00000020849   0.000000000000159   3-52   LEM domain  

Microcebus murinus 76_1 has 7 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000000055   0.0000000000000114   2-52   LEM domain  
ENSMICP00000003196   1.44e-22   2-54   LEM domain  
  0.00000275   130-155   LEM domain  
ENSMICP00000003634   0.0000000000844   4-55   LEM domain  
ENSMICP00000004267   0.000000000000235   3-52   LEM domain  
ENSMICP00000011014   0.00000000000053   11-54   LEM domain  
ENSMICP00000015024   0.0000000000235   3-41   LEM domain  

Rattus norvegicus 76_5.0 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000012715   0.00000000000000255   14-62   LEM domain  
ENSRNOP00000023065   0.0000000000124   281-326   LEM domain  
ENSRNOP00000032921   0.000000000000667   13-55   LEM domain  
ENSRNOP00000053121   0.000000000000102   3-52   LEM domain  
ENSRNOP00000053507   0.0000000000255   6-57   LEM domain  

Mus musculus 76_38 has 26 significant domains in 21 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000002029   0.0000000000000746   3-52   LEM domain  
ENSMUSP00000020123   1.44e-22   2-54   LEM domain  
  0.00000000000000667   107-154   LEM domain  
ENSMUSP00000031474   0.00000000000922   67-118   LEM domain  
ENSMUSP00000058221   0.0000000000196   3-41   LEM domain  
ENSMUSP00000072092   7.98e-23   2-54   LEM domain  
  0.00000000000000366   107-154   LEM domain  
ENSMUSP00000083878   0.00000000000844   67-118   LEM domain  
ENSMUSP00000089864   6.93e-23   2-54   LEM domain  
  0.00000000000000327   107-154   LEM domain  
ENSMUSP00000094133   0.0000000000000294   3-52   LEM domain  
ENSMUSP00000094158   0.0000824   1-28   LEM domain  
ENSMUSP00000096956   6.15e-23   2-54   LEM domain  
  0.00000000000000262   106-154   LEM domain  
ENSMUSP00000100930   5.23e-23   2-54   LEM domain  
  0.00000000000000222   106-154   LEM domain  
ENSMUSP00000107976   6.28e-16   2-52   LEM domain  
ENSMUSP00000112639   0.0000000000000353   3-52   LEM domain  
ENSMUSP00000112661   0.000000000000667   11-53   LEM domain  
ENSMUSP00000112797   0.00000000000746   259-305   LEM domain  
ENSMUSP00000113103   0.000000000000647   11-53   LEM domain  
ENSMUSP00000113162   0.00000000000844   279-325   LEM domain  
ENSMUSP00000139708   1.14e-16   2-52   LEM domain  
ENSMUSP00000140193   0.00000000000000161   2-52   LEM domain  
ENSMUSP00000140418   1.08e-16   2-52   LEM domain  
ENSMUSP00000140524   3.34e-16   2-52   LEM domain  
 
Weak hits:
ENSMUSP00000139322   0.0765   14-30   LEM domain  

Dipodomys ordii 76_1 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000001366   0.000000000147   4-41   LEM domain  
ENSDORP00000004089   0.000000000000149   3-52   LEM domain  
ENSDORP00000005670   0.000000000000569   1-42   LEM domain  
ENSDORP00000006241   0.000000000000628   11-53   LEM domain  
ENSDORP00000011979   0.0000000000235   293-339   LEM domain  

Ictidomys tridecemlineatus 76_2 has 7 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000000770   0.0000000000235   3-41   LEM domain  
ENSSTOP00000008217   1.83e-22   2-53   LEM domain  
  0.00000000000000301   108-156   LEM domain  
ENSSTOP00000012547   0.00000000000171   10-53   LEM domain  
ENSSTOP00000013158   0.000000000000161   3-52   LEM domain  
ENSSTOP00000014284   0.0000000000294   5-57   LEM domain  
ENSSTOP00000020998   0.0000000000294   5-57   LEM domain  

Heterocephalus glaber v1.7-2 has 5 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000266732   0.0000000000000196   16-63   LEM domain  
HGL_H00000350686   0.0000000000883   5-52   LEM domain  
HGL_H00000356121   0.000000216   1-56   LEM domain  
HGL_N10019145   2.22e-19   2-54   LEM domain  
  0.00000000000000288   104-152   LEM domain  

Cavia porcellus 76_3 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000002401   0.000000000000114   3-51   LEM domain  
ENSCPOP00000004693   0.00000000000000161   2-51   LEM domain  
ENSCPOP00000007152   0.0000000000235   3-41   LEM domain  
ENSCPOP00000010435   1.77e-16   2-54   LEM domain  
  0.00157   122-146   LEM domain  
ENSCPOP00000020919   0.0000000000216   66-116   LEM domain  
 
Weak hits:
ENSCPOP00000010438   0.00569   1-21   LEM domain  

Oryctolagus cuniculus 76_2 has 6 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000000672   0.000000000000569   12-55   LEM domain  
ENSOCUP00000000762   0.000000000000157   3-52   LEM domain  
ENSOCUP00000007971   0.000000000000019   84-131   LEM domain  
ENSOCUP00000010920   6.15e-23   2-54   LEM domain  
  0.00000000000000327   110-157   LEM domain  
ENSOCUP00000026728   0.000000000000471   13-56   LEM domain  
 
Weak hits:
ENSOCUP00000007264   0.000255   5-34   LEM domain  

Ochotona princeps 76 has 6 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000000765   0.000000000706   159-194   LEM domain  
ENSOPRP00000002034   0.0000000000235   3-41   LEM domain  
ENSOPRP00000004526   1.44e-22   2-54   LEM domain  
  0.00000000000000641   106-154   LEM domain  
ENSOPRP00000005820   0.000000000122   64-115   LEM domain  
ENSOPRP00000009313   0.0000000000000451   1-43   LEM domain  

Tupaia belangeri 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000003397   0.00000000000000184   2-52   LEM domain  
ENSTBEP00000009343   0.000000114   65-104   LEM domain  
ENSTBEP00000010098   9.02e-22   2-54   LEM domain  

Sus scrofa 76_10.2 has 7 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000000500   0.000000000000412   10-53   LEM domain  
ENSSSCP00000000950   2.49e-23   2-54   LEM domain  
  5.23e-16   107-156   LEM domain  
ENSSSCP00000001649   0.0000000000235   3-41   LEM domain  
ENSSSCP00000016216   0.00000000000000569   2-52   LEM domain  
ENSSSCP00000019747   0.0000000000863   171-211   LEM domain  
ENSSSCP00000023679   0.00000000000000334   15-62   LEM domain  

Bos taurus 76_3.1 has 10 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000000786   0.0000000000124   67-118   LEM domain  
ENSBTAP00000005553   9.16e-23   2-54   LEM domain  
  0.00000000000000262   107-155   LEM domain  
ENSBTAP00000016715   0.000000000159   349-391   LEM domain  
ENSBTAP00000020642   0.0000000000235   3-41   LEM domain  
ENSBTAP00000030177   0.000000000000255   3-52   LEM domain  
ENSBTAP00000047700   0.00000000000053   10-53   LEM domain  
ENSBTAP00000048213   1.2e-22   2-54   LEM domain  
  0.00102   134-158   LEM domain  
ENSBTAP00000050956   0.00000000000000216   3-50   LEM domain  
ENSBTAP00000051411   0.000000000000255   3-52   LEM domain  

Ovis aries 76_3.1 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000003245   0.000000000000608   11-55   LEM domain  
ENSOARP00000004192   0.0000000000000392   3-50   LEM domain  
ENSOARP00000010817   0.0000000000143   69-119   LEM domain  
ENSOARP00000013815   0.00000000000000373   19-67   LEM domain  
ENSOARP00000018557   0.0000000000883   362-404   LEM domain  

Vicugna pacos 76_1 has 5 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000004024   0.0000000000373   4-55   LEM domain  
ENSVPAP00000004362   2.09e-22   2-54   LEM domain  
  0.0000000000000824   106-148   LEM domain  
ENSVPAP00000004732   0.00000000000000314   2-51   LEM domain  
ENSVPAP00000007669   0.000000000922   347-386   LEM domain  

Tursiops truncatus 76_1 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000002938   0.0000000432   347-388   LEM domain  
ENSTTRP00000004457   2.09e-22   2-54   LEM domain  
  0.0216   136-155   LEM domain  
ENSTTRP00000006568   0.0000000000235   3-40   LEM domain  
ENSTTRP00000010100   0.0000000000981   65-115   LEM domain  
ENSTTRP00000011704   0.00000000000051   10-53   LEM domain  
ENSTTRP00000013203   0.000000000000157   3-52   LEM domain  
ENSTTRP00000013260   0.000000000000122   2-52   LEM domain  

Mustela putorius furo 76_1.0 has 6 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000002628   0.0000000000161   3-55   LEM domain  
ENSMPUP00000009156   0.000000000000255   3-52   LEM domain  
ENSMPUP00000011287   3.79e-22   2-54   LEM domain  
  0.00000000000000536   107-155   LEM domain  
ENSMPUP00000015802   0.00000000106   426-468   LEM domain  
ENSMPUP00000017411   0.00000000000051   10-53   LEM domain  

  1 2 3 4 5 6 7 8 9   Next Last
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Select to display   Genome       Domains   Proteins
No Yes ALL   8339 8339
No Yes Homo sapiens 76_38 Human 26 21
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 5 4
No Yes Gorilla gorilla 76_3.1 Western gorilla 12 10
No Yes Pongo abelii 76_2 Sumatran orangutan 10 8
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 6 5
No Yes Papio anubis 76 Olive baboon 13 11
No Yes Macaca mulatta 76_1 Rhesus monkey 13 10
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 23 18
No Yes Otolemur garnettii 76_3 Small-eared galago 5 4
No Yes Microcebus murinus 76_1 Gray mouse lemur 7 6
No Yes Rattus norvegicus 76_5.0 Norway rat 5 5
No Yes Mus musculus 76_38 House mouse 26 21
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 5 5
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 7 6
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 5 4
No Yes Cavia porcellus 76_3 Domestic guinea pig 5 5
No Yes Oryctolagus cuniculus 76_2 Rabbit 6 5
No Yes Ochotona princeps 76 American pika 6 5
No Yes Tupaia belangeri 76 Northern tree shrew 3 3
No Yes Sus scrofa 76_10.2 Pig 7 6
No Yes Bos taurus 76_3.1 Cattle 10 9
No Yes Ovis aries 76_3.1 Sheep 5 5
No Yes Vicugna pacos 76_1 Alpaca 5 4
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 7 7
No Yes Mustela putorius furo 76_1.0 Domestic ferret 6 5
No Yes Ailuropoda melanoleuca 76_1 Giant panda 9 7
No Yes Canis familiaris 76_3.1 Dog 7 6
No Yes Felis catus 76_6.2 Domestic cat 5 5
No Yes Equus caballus 76_2 Horse 6 5
No Yes Myotis lucifugus 76_2.0 Little brown bat 6 5
No Yes Pteropus vampyrus 76_1 Large flying fox 7 7
No Yes Sorex araneus 76_1 European shrew 3 3
No Yes Erinaceus europaeus 76 Western European hedgehog 4 4
No Yes Procavia capensis 76_1 Cape rock hyrax 6 5
No Yes Loxodonta africana 76_3 African savanna elephant 11 9
No Yes Echinops telfairi 76 Small Madagascar hedgehog 5 5
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 12 9
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 5 5
No Yes Macropus eugenii 76_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 4 4
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 8 7
No Yes Ornithorhynchus anatinus 76_5 Platypus 3 3
No Yes Saccoglossus kowalevskii v3.0   5 4
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 1
No Yes Meleagris gallopavo 76_2 Turkey 4 4
No Yes Gallus gallus 76_4 Chicken 4 3
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 3 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 7 6
No Yes Xenopus laevis African clawed frog 30 22
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 9 8
No Yes Latimeria chalumnae 76_1 Coelacanth 7 6
No Yes Lepisosteus oculatus 76 Spotted gar 7 6
No Yes Gadus morhua 76_1 Atlantic cod 13 11
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 17 11
No Yes Takifugu rubripes 76_4 Torafugu 25 18
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 11 8
No Yes Oryzias latipes 76_1 Japanese medaka 16 11
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 8 6
No Yes Poecilia formosa 76 Amazon molly 9 6
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 8 6
No Yes Astyanax mexicanus 76 Mexican tetra 14 10
No Yes Danio rerio 76_9 Zebrafish 24 18
No Yes Oikopleura dioica   4 3
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 6 6
No Yes Ciona intestinalis 76 Vase tunicate 4 3
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 5 5
No Yes Adineta vaga   8 8
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   2 2
No Yes Capitella sp. I   6 4
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 2 2
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2
No Yes Linepithema humile v1.1 Argentine ant 2 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 2
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2
No Yes Atta cephalotes v1.1   2 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 2 2
No Yes Lucilia cuprina Australian sheep blowfly 3 3
No Yes Drosophila grimshawi 1.3   4 4
No Yes Drosophila willistoni 1.3   6 6
No Yes Drosophila pseudoobscura 2.13   4 4
No Yes Drosophila persimilis 1.3   4 4
No Yes Drosophila suzukii   3 3
No Yes Drosophila yakuba 1.3   3 3
No Yes Drosophila simulans 1.3   3 3
No Yes Drosophila sechellia 1.3   3 3
No Yes Drosophila melanogaster 76_5 Fruit fly 6 6
No Yes Drosophila erecta 1.3   3 3
No Yes Drosophila ananassae 1.3   4 4
No Yes Drosophila virilis 1.2   4 4
No Yes Drosophila mojavensis 1.3   4 4
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 3
No Yes Culex pipiens quinquefasciatus Southern house mosquito 4 4
No Yes Anopheles darlingi 22 American malaria mosquito 3 3
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 4
No Yes Tribolium castaneum 3.0 Red flour beetle 2 2
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 4
No Yes Acyrthosiphon pisum Pea aphid 4 4
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 4 4
No Yes Strigamia maritima 22   4 3
No Yes Sarcoptes scabiei   2 2
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 3 2
No Yes Pristionchus pacificus   2 2
No Yes Meloidogyne incognita Southern root-knot nematode 4 4
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   2 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 3 3
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   6 6
No Yes Caenorhabditis remanei   3 3
No Yes Caenorhabditis elegans 76_235 Roundworm 5 5
No Yes Caenorhabditis briggsae 2   3 3
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 2 2
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 6 5
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Hydra vulgaris   3 3
No Yes Amphimedon queenslandica   4 4
No Yes Trichoplax adhaerens   5 4
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Dothistroma septosporum   1 1
No Yes Naegleria gruberi   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 15 13
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 6 6
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 3 3
No Yes Homo sapiens 75_37 (old version GRC) Human 28 23
No Yes Homo sapiens (NCBI version) Human 16 13
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 8 7
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 3 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Homo sapiens 69_37 Human 8 7
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 5 4
No Yes Gorilla gorilla 69_3.1 Western gorilla 8 7
No Yes Pongo abelii 69_2 Sumatran orangutan 8 7
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 6 5
No Yes Macaca mulatta 69_1 Rhesus monkey 7 6
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 12 10
No Yes Otolemur garnettii 69_3 Small-eared galago 5 4
No Yes Microcebus murinus 69_1 Gray mouse lemur 7 6
No Yes Rattus norvegicus 69_3.4 Norway rat 7 6
No Yes Mus musculus 69_38 House mouse 8 7
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 5 5
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 6 5
No Yes Cavia porcellus 69_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 69_2 Rabbit 7 6
No Yes Ochotona princeps 69 American pika 6 5
No Yes Tupaia belangeri 69 Northern tree shrew 3 3
No Yes Sus scrofa 69_10.2 Pig 7 6
No Yes Bos taurus 69_3.1 Cattle 7 7
No Yes Vicugna pacos 69_1 Alpaca 5 4
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 7 7
No Yes Mustela putorius furo 69_1.0 Domestic ferret 6 5
No Yes Ailuropoda melanoleuca 69_1 Giant panda 6 5
No Yes Canis familiaris 69_3.1 Dog 7 6
No Yes Felis catus 69 Domestic cat 5 5
No Yes Equus caballus 69_2 Horse 5 4
No Yes Myotis lucifugus 69_2.0 Little brown bat 6 5
No Yes Pteropus vampyrus 69_1 Large flying fox 7 7
No Yes Sorex araneus 69_1 European shrew 3 3
No Yes Erinaceus europaeus 69 Western European hedgehog 4 4
No Yes Procavia capensis 69_1 Cape rock hyrax 6 5
No Yes Loxodonta africana 69_3 African savanna elephant 8 7
No Yes Echinops telfairi 69 Small Madagascar hedgehog 5 5
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 5 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 5 5
No Yes Macropus eugenii 69_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 3 3
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 6 5
No Yes Ornithorhynchus anatinus 69_5 Platypus 3 3
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 1
No Yes Meleagris gallopavo 69_2 Turkey 3 3
No Yes Gallus gallus 69_2 Chicken 4 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 7 6
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 7 6
No Yes Latimeria chalumnae 69_1 Coelacanth 7 6
No Yes Gadus morhua 69_1 Atlantic cod 9 7
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 12 8
No Yes Takifugu rubripes 69_4 Torafugu 9 6
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 8 6
No Yes Oryzias latipes 69_1 Japanese medaka 10 7
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 8 6
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 7 5
No Yes Danio rerio 69_9 Zebrafish 12 9
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 3
No Yes Ciona intestinalis 69 Vase tunicate 4 3
No Yes Drosophila melanogaster 69_5 Fruit fly 4 4
No Yes Caenorhabditis elegans 69_215 Roundworm 3 3
No Yes NCBI 2017_08 genome   3748 2968
No Yes STRING v9.0.5 (STRING)   258 222
No Yes Uniprot 2018_03 genome   2345 1979
No Yes PDB chains (SCOP 1.75) (PDB)   6 5
No Yes Protein Data Bank (all PDB sequenc)   9 8
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   21 20
No Yes TargetDB (Targets)   5 5

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