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Nicotinic receptor ligand binding domain-like superfamily domain assignments
in
Monodelphis domestica 69_5

Assignment details

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Monodelphis domestica 69_5 has 48 significant domains in 46 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMODP00000000957   3.79e-42   2-163   Nicotinic receptor ligand binding domain-like  
ENSMODP00000001000   8.5e-55   192-397   Nicotinic receptor ligand binding domain-like  
ENSMODP00000001077   3.92e-57   39-242   Nicotinic receptor ligand binding domain-like  
ENSMODP00000002131   8.11e-53   55-265   Nicotinic receptor ligand binding domain-like  
ENSMODP00000003211   2.88e-22   21-113   Nicotinic receptor ligand binding domain-like  
ENSMODP00000003235   3.14e-51   4-166   Nicotinic receptor ligand binding domain-like  
ENSMODP00000003836   1.44e-47   34-229   Nicotinic receptor ligand binding domain-like  
ENSMODP00000003851   1.57e-46   52-247   Nicotinic receptor ligand binding domain-like  
ENSMODP00000004466   1.28e-57   45-252   Nicotinic receptor ligand binding domain-like  
ENSMODP00000006660   3.14e-53   23-238   Nicotinic receptor ligand binding domain-like  
ENSMODP00000007237   2.88e-56   42-249   Nicotinic receptor ligand binding domain-like  
ENSMODP00000007299   1.23e-57   65-271   Nicotinic receptor ligand binding domain-like  
ENSMODP00000007322   1.29e-45   113-277   Nicotinic receptor ligand binding domain-like  
  0.00000000902   34-82   Nicotinic receptor ligand binding domain-like  
ENSMODP00000008379   1.06e-54   42-242   Nicotinic receptor ligand binding domain-like  
ENSMODP00000008620   4.45e-61   26-243   Nicotinic receptor ligand binding domain-like  
ENSMODP00000009557   2.09e-47   1-177   Nicotinic receptor ligand binding domain-like  
ENSMODP00000009595   2.22e-57   43-249   Nicotinic receptor ligand binding domain-like  
ENSMODP00000009659   1.96e-59   34-243   Nicotinic receptor ligand binding domain-like  
ENSMODP00000009774   5.36e-58   39-241   Nicotinic receptor ligand binding domain-like  
ENSMODP00000010215   6.67e-30   2-148   Nicotinic receptor ligand binding domain-like  
ENSMODP00000010245   7.98e-65   29-233   Nicotinic receptor ligand binding domain-like  
ENSMODP00000011117   6.8e-72   26-229   Nicotinic receptor ligand binding domain-like  
ENSMODP00000011170   1.23e-57   41-248   Nicotinic receptor ligand binding domain-like  
ENSMODP00000011766   2.48e-66   23-230   Nicotinic receptor ligand binding domain-like  
ENSMODP00000012626   8.76e-68   2-205   Nicotinic receptor ligand binding domain-like  
ENSMODP00000012672   1.44e-73   33-239   Nicotinic receptor ligand binding domain-like  
ENSMODP00000014859   2.09e-66   28-230   Nicotinic receptor ligand binding domain-like  
ENSMODP00000014893   1.01e-69   26-233   Nicotinic receptor ligand binding domain-like  
ENSMODP00000014903   8.63e-66   46-252   Nicotinic receptor ligand binding domain-like  
ENSMODP00000017702   7.98e-55   41-247   Nicotinic receptor ligand binding domain-like  
ENSMODP00000017706   7.59e-53   17-223   Nicotinic receptor ligand binding domain-like  
ENSMODP00000019892   2.48e-74   26-232   Nicotinic receptor ligand binding domain-like  
ENSMODP00000021042   9.94e-74   38-244   Nicotinic receptor ligand binding domain-like  
ENSMODP00000021419   3.27e-66   28-234   Nicotinic receptor ligand binding domain-like  
ENSMODP00000021578   3.53e-51   123-308   Nicotinic receptor ligand binding domain-like  
  0.00000785   46-92   Nicotinic receptor ligand binding domain-like  
ENSMODP00000022793   4.05e-55   85-285   Nicotinic receptor ligand binding domain-like  
ENSMODP00000022794   4.97e-52   25-234   Nicotinic receptor ligand binding domain-like  
ENSMODP00000025719   1.44e-68   31-236   Nicotinic receptor ligand binding domain-like  
ENSMODP00000025732   5.23e-54   20-222   Nicotinic receptor ligand binding domain-like  
ENSMODP00000025760   1.96e-54   64-270   Nicotinic receptor ligand binding domain-like  
ENSMODP00000025764   2.22e-57   43-249   Nicotinic receptor ligand binding domain-like  
ENSMODP00000025776   1.96e-57   48-256   Nicotinic receptor ligand binding domain-like  
ENSMODP00000025784   3.14e-57   39-242   Nicotinic receptor ligand binding domain-like  
ENSMODP00000031431   4.45e-52   47-239   Nicotinic receptor ligand binding domain-like  
ENSMODP00000037621   0.0000017   71-112   Nicotinic receptor ligand binding domain-like  
ENSMODP00000037991   2.88e-49   25-207   Nicotinic receptor ligand binding domain-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   79575 79575
No Yes Homo sapiens 76_38 Human 170 168
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 45 44
No Yes Gorilla gorilla 76_3.1 Western gorilla 58 56
No Yes Pongo abelii 76_2 Sumatran orangutan 47 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 50 49
No Yes Papio anubis 76 Olive baboon 46 46
No Yes Macaca mulatta 76_1 Rhesus monkey 64 63
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 103 102
No Yes Otolemur garnettii 76_3 Small-eared galago 49 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 47 44
No Yes Rattus norvegicus 76_5.0 Norway rat 47 47
No Yes Mus musculus 76_38 House mouse 69 68
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 45 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 45 45
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 47 46
No Yes Cavia porcellus 76_3 Domestic guinea pig 44 44
No Yes Oryctolagus cuniculus 76_2 Rabbit 47 47
No Yes Ochotona princeps 76 American pika 46 41
No Yes Tupaia belangeri 76 Northern tree shrew 39 35
No Yes Sus scrofa 76_10.2 Pig 53 52
No Yes Bos taurus 76_3.1 Cattle 52 52
No Yes Ovis aries 76_3.1 Sheep 51 51
No Yes Vicugna pacos 76_1 Alpaca 34 32
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 49 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 47 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 50 50
No Yes Canis familiaris 76_3.1 Dog 58 58
No Yes Felis catus 76_6.2 Domestic cat 48 48
No Yes Equus caballus 76_2 Horse 46 46
No Yes Myotis lucifugus 76_2.0 Little brown bat 48 47
No Yes Pteropus vampyrus 76_1 Large flying fox 43 42
No Yes Sorex araneus 76_1 European shrew 36 30
No Yes Erinaceus europaeus 76 Western European hedgehog 38 36
No Yes Procavia capensis 76_1 Cape rock hyrax 39 37
No Yes Loxodonta africana 76_3 African savanna elephant 60 59
No Yes Echinops telfairi 76 Small Madagascar hedgehog 43 41
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 54 53
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 31 28
No Yes Macropus eugenii 76_1.0 Tammar wallaby 43 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 53 53
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 51 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 47 47
No Yes Saccoglossus kowalevskii v3.0   144 143
No Yes Petromyzon marinus 76_7.0 Sea lamprey 29 29
No Yes Meleagris gallopavo 76_2 Turkey 47 47
No Yes Gallus gallus 76_4 Chicken 43 43
No Yes Anas platyrhynchos 76_1.0 Mallard 39 39
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 41 41
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 43 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 55 55
No Yes Anolis carolinensis 76_2.0 Green anole 40 40
No Yes Xenopus laevis African clawed frog 33 33
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 53 53
No Yes Latimeria chalumnae 76_1 Coelacanth 54 53
No Yes Lepisosteus oculatus 76 Spotted gar 63 61
No Yes Gadus morhua 76_1 Atlantic cod 79 74
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 107 105
No Yes Takifugu rubripes 76_4 Torafugu 405 390
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 106 106
No Yes Oryzias latipes 76_1 Japanese medaka 89 89
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 76 76
No Yes Poecilia formosa 76 Amazon molly 80 74
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 99 99
No Yes Astyanax mexicanus 76 Mexican tetra 67 65
No Yes Danio rerio 76_9 Zebrafish 113 113
No Yes Oikopleura dioica   34 34
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 40 38
No Yes Ciona intestinalis 76 Vase tunicate 18 18
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 75 70
No Yes Adineta vaga   107 106
No Yes Octopus bimaculoides 280   85 84
No Yes Crassostrea gigas 22 Pacific oyster 166 151
No Yes Lottia gigantea Owl limpet 87 87
No Yes Helobdella robusta   85 84
No Yes Capitella sp. I   170 167
No Yes Danaus plexippus OGS1.0 Monarch butterfly 30 30
No Yes Heliconius melpomene Postman butterfly 22 20
No Yes Bombyx mori Domestic silkworm 26 26
No Yes Nasonia vitripennis Jewel wasp 23 23
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 71 71
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 24 23
No Yes Linepithema humile v1.1 Argentine ant 31 30
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 35 33
No Yes Solenopsis invicta v.2.2.3 Red fire ant 27 25
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 26 23
No Yes Atta cephalotes v1.1   32 29
No Yes Camponotus floridanus v3.3 Florida carpenter ant 28 24
No Yes Lucilia cuprina Australian sheep blowfly 21 21
No Yes Drosophila grimshawi 1.3   24 23
No Yes Drosophila willistoni 1.3   24 23
No Yes Drosophila pseudoobscura 2.13   23 22
No Yes Drosophila persimilis 1.3   24 23
No Yes Drosophila suzukii   26 23
No Yes Drosophila yakuba 1.3   25 23
No Yes Drosophila simulans 1.3   24 23
No Yes Drosophila sechellia 1.3   24 23
No Yes Drosophila melanogaster 76_5 Fruit fly 66 65
No Yes Drosophila erecta 1.3   24 23
No Yes Drosophila ananassae 1.3   23 22
No Yes Drosophila virilis 1.2   24 23
No Yes Drosophila mojavensis 1.3   24 23
No Yes Megaselia scalaris 22   15 15
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 23 22
No Yes Culex pipiens quinquefasciatus Southern house mosquito 38 36
No Yes Anopheles darlingi 22 American malaria mosquito 19 18
No Yes Anopheles gambiae 49_3j African malaria mosquito 28 28
No Yes Tribolium castaneum 3.0 Red flour beetle 27 27
No Yes Pediculus humanus corporis (Early assembly) Human body louse 21 21
No Yes Acyrthosiphon pisum Pea aphid 24 24
No Yes Rhodnius prolixus 22   27 26
No Yes Daphnia pulex Common water flea 30 30
No Yes Strigamia maritima 22   56 52
No Yes Sarcoptes scabiei   20 19
No Yes Tetranychus urticae Two-spotted spider mite 38 37
No Yes Ixodes scapularis (Preliminary) Black-legged tick 38 36
No Yes Pristionchus pacificus   162 161
No Yes Meloidogyne incognita Southern root-knot nematode 50 50
No Yes Meloidogyne hapla   23 23
No Yes Onchocerca volvulus 22   53 53
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 61 60
No Yes Caenorhabditis japonica   86 85
No Yes Caenorhabditis brenneri   124 122
No Yes Caenorhabditis remanei   118 114
No Yes Caenorhabditis elegans 76_235 Roundworm 139 139
No Yes Caenorhabditis briggsae 2   104 102
No Yes Trichinella spiralis 22   32 31
No Yes Hymenolepis microstoma   14 12
No Yes Echinococcus multilocularis   17 17
No Yes Echinococcus granulosus   17 17
No Yes Taenia solium Pork tapeworm 16 16
No Yes Schistosoma mansoni   21 21
No Yes Acropora digitifera v1.0   58 56
No Yes Nematostella vectensis 1.0 Starlet sea anemone 106 105
No Yes Hydra vulgaris   25 25
No Yes Monosiga brevicollis   3 3
No Yes Sphaeroforma arctica JP610   2 2
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   4 4
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Porphyridium purpureum 02_2012   2 2
No Yes Bigelowiella natans CCMP2755 22   4 4
No Yes Cyanophora paradoxa   7 7
No Yes Aureococcus anophagefferens   14 14
No Yes Fragilariopsis cylindrus   5 5
No Yes Symbiodinium minutum clade B1 v1.2   11 11
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   24 24
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Niastella koreensis GR20-10   2 2
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Azospirillum sp. B510   2 2
No Yes Azospirillum brasilense Sp245   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Francisella sp. TX077308   1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   1 1
No Yes Francisella tularensis subsp. tularensis WY96-3418   1 1
No Yes Francisella cf. novicida 3523   1 1
No Yes Francisella novicida U112   1 1
No Yes Methanosphaerula palustris E1-9c   1 1
No Yes Methanoregula boonei 6A8   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 58 56
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 53 52
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 34 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 84 83
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 125 125
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Francisella tularensis subsp. mediasiatica FSC147   1 1
No Yes Francisella tularensis subsp. holarctica F92   1 1
No Yes Francisella tularensis subsp. holarctica FTNF002-00   1 1
No Yes Francisella tularensis subsp. holarctica OSU18   1 1
No Yes Francisella tularensis subsp. holarctica LVS   1 1
No Yes Francisella tularensis subsp. holarctica FSC200   1 1
No Yes Francisella tularensis subsp. tularensis TIGB03   1 1
No Yes Francisella tularensis subsp. tularensis TI0902   1 1
No Yes Francisella tularensis subsp. tularensis NE061598   1 1
No Yes Francisella tularensis subsp. tularensis FSC198   1 1
No Yes Francisella tularensis subsp. tularensis SCHU S4   1 1
No Yes Francisella cf. novicida Fx1   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 169 167
No Yes Homo sapiens (NCBI version) Human 79 78
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 42 42
No Yes Loa loa v3.3 (Request) Eye worm 50 50
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 62 61
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 32 31
No Yes Homo sapiens 69_37 Human 49 48
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 43 42
No Yes Gorilla gorilla 69_3.1 Western gorilla 45 43
No Yes Pongo abelii 69_2 Sumatran orangutan 45 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 45 44
No Yes Macaca mulatta 69_1 Rhesus monkey 47 46
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 49 48
No Yes Otolemur garnettii 69_3 Small-eared galago 46 46
No Yes Microcebus murinus 69_1 Gray mouse lemur 47 44
No Yes Rattus norvegicus 69_3.4 Norway rat 44 43
No Yes Mus musculus 69_38 House mouse 43 43
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 45 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 45 45
No Yes Cavia porcellus 69_3 Domestic guinea pig 42 42
No Yes Oryctolagus cuniculus 69_2 Rabbit 44 44
No Yes Ochotona princeps 69 American pika 46 41
No Yes Tupaia belangeri 69 Northern tree shrew 39 35
No Yes Sus scrofa 69_10.2 Pig 48 47
No Yes Bos taurus 69_3.1 Cattle 45 45
No Yes Vicugna pacos 69_1 Alpaca 34 32
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 49 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 46 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 46 46
No Yes Canis familiaris 69_3.1 Dog 46 46
No Yes Felis catus 69 Domestic cat 41 36
No Yes Equus caballus 69_2 Horse 45 45
No Yes Myotis lucifugus 69_2.0 Little brown bat 43 43
No Yes Pteropus vampyrus 69_1 Large flying fox 43 42
No Yes Sorex araneus 69_1 European shrew 36 30
No Yes Erinaceus europaeus 69 Western European hedgehog 38 36
No Yes Procavia capensis 69_1 Cape rock hyrax 39 37
No Yes Loxodonta africana 69_3 African savanna elephant 47 46
No Yes Echinops telfairi 69 Small Madagascar hedgehog 43 41
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 42 36
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 31 28
No Yes Macropus eugenii 69_1.0 Tammar wallaby 43 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 43 43
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 48 46
No Yes Ornithorhynchus anatinus 69_5 Platypus 43 43
No Yes Petromyzon marinus 69_7.0 Sea lamprey 28 28
No Yes Meleagris gallopavo 69_2 Turkey 40 40
No Yes Gallus gallus 69_2 Chicken 41 41
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 41 41
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 43 43
No Yes Anolis carolinensis 69_2.0 Green anole 41 40
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 48 48
No Yes Latimeria chalumnae 69_1 Coelacanth 46 45
No Yes Gadus morhua 69_1 Atlantic cod 73 68
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 73 71
No Yes Takifugu rubripes 69_4 Torafugu 76 67
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 71 71
No Yes Oryzias latipes 69_1 Japanese medaka 66 66
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 75 75
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 72 72
No Yes Danio rerio 69_9 Zebrafish 75 75
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 13 12
No Yes Ciona intestinalis 69 Vase tunicate 17 17
No Yes Drosophila melanogaster 69_5 Fruit fly 24 24
No Yes Caenorhabditis elegans 69_215 Roundworm 103 103
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes NCBI 2017_08 genome   28760 28315
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   3 3
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   4 4
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   2735 2664
No Yes Uniprot 2018_03 genome   24700 24087
No Yes Global Ocean Sampling Expedition (GOS)   107 107
No Yes NCBI plasmid sequences (Plasmids)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   2021 2021
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3509 3509
No Yes TargetDB (Targets)   67 67

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