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YWTD domain superfamily domain assignments
in
Monodelphis domestica 69_5

Assignment details

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Monodelphis domestica 69_5 has 43 significant domains in 16 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMODP00000000529   6.15e-55   368-628   YWTD domain  
ENSMODP00000003507   1.31e-51   1193-1458   YWTD domain  
  8.63e-48   461-723   YWTD domain  
  3.14e-46   1813-2058   YWTD domain  
  1.02e-42   1508-1765   YWTD domain  
  1.44e-40   2948-3203   YWTD domain  
  2.22e-40   137-380   YWTD domain  
  3.79e-31   2122-2389   YWTD domain  
  2.09e-30   3824-4101   YWTD domain  
ENSMODP00000004432   6.54e-49   442-702   YWTD domain  
ENSMODP00000007833   4.05e-52   447-711   YWTD domain  
ENSMODP00000009960   4.19e-52   3186-3450   YWTD domain  
  1.11e-49   1425-1686   YWTD domain  
  5.23e-46   2377-2630   YWTD domain  
  9.42e-44   387-648   YWTD domain  
  1.19e-41   4042-4313   YWTD domain  
  9.02e-40   1735-1999   YWTD domain  
  3.4e-34   2073-2322   YWTD domain  
  3.66e-28   717-957   YWTD domain  
ENSMODP00000010091   8.24e-47   961-1197   YWTD domain  
ENSMODP00000015830   3.27e-46   2-191   YWTD domain  
ENSMODP00000015832   4.19e-52   40-287   YWTD domain  
ENSMODP00000016287   1.57e-46   767-1019   YWTD domain  
ENSMODP00000016547   6.41e-43   1152-1408   YWTD domain  
ENSMODP00000022743   7.59e-57   632-887   YWTD domain  
  2.88e-55   21-280   YWTD domain  
  1.7e-49   331-570   YWTD domain  
  2.75e-39   935-1194   YWTD domain  
ENSMODP00000023728   3.92e-56   1562-1820   YWTD domain  
  5.75e-45   424-684   YWTD domain  
  5.1e-43   116-374   YWTD domain  
  1.12e-41   2406-2671   YWTD domain  
  1.57e-34   763-1003   YWTD domain  
  0.0000000732   4-66   YWTD domain  
ENSMODP00000024825   4.97e-61   449-705   YWTD domain  
  4.58e-56   1363-1620   YWTD domain  
  4.45e-55   751-1006   YWTD domain  
  3.14e-48   1058-1314   YWTD domain  
ENSMODP00000027497   1.44e-32   236-476   YWTD domain  
  5.49e-25   62-189   YWTD domain  
ENSMODP00000036954   4.71e-49   487-742   YWTD domain  
  3.92e-29   49-309   YWTD domain  
ENSMODP00000040101   0.0000209   6-147   YWTD domain  
 
Weak hits:
ENSMODP00000004648   0.0785   287-415   YWTD domain  
ENSMODP00000025921   0.00112   169-385   YWTD domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   116228 116228
No Yes Homo sapiens 76_38 Human 105 53
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 49 16
No Yes Gorilla gorilla 76_3.1 Western gorilla 64 24
No Yes Pongo abelii 76_2 Sumatran orangutan 40 13
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 43 17
No Yes Papio anubis 76 Olive baboon 54 18
No Yes Macaca mulatta 76_1 Rhesus monkey 67 27
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 94 42
No Yes Otolemur garnettii 76_3 Small-eared galago 42 15
No Yes Microcebus murinus 76_1 Gray mouse lemur 44 15
No Yes Rattus norvegicus 76_5.0 Norway rat 46 17
No Yes Mus musculus 76_38 House mouse 78 34
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 46 14
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 41 18
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 51 16
No Yes Cavia porcellus 76_3 Domestic guinea pig 45 16
No Yes Oryctolagus cuniculus 76_2 Rabbit 42 14
No Yes Ochotona princeps 76 American pika 46 14
No Yes Tupaia belangeri 76 Northern tree shrew 44 14
No Yes Sus scrofa 76_10.2 Pig 36 22
No Yes Bos taurus 76_3.1 Cattle 39 13
No Yes Ovis aries 76_3.1 Sheep 61 17
No Yes Vicugna pacos 76_1 Alpaca 30 9
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 47 14
No Yes Mustela putorius furo 76_1.0 Domestic ferret 48 16
No Yes Ailuropoda melanoleuca 76_1 Giant panda 57 22
No Yes Canis familiaris 76_3.1 Dog 75 24
No Yes Felis catus 76_6.2 Domestic cat 59 22
No Yes Equus caballus 76_2 Horse 67 23
No Yes Myotis lucifugus 76_2.0 Little brown bat 48 18
No Yes Pteropus vampyrus 76_1 Large flying fox 46 14
No Yes Sorex araneus 76_1 European shrew 30 10
No Yes Erinaceus europaeus 76 Western European hedgehog 37 11
No Yes Procavia capensis 76_1 Cape rock hyrax 46 13
No Yes Loxodonta africana 76_3 African savanna elephant 61 21
No Yes Echinops telfairi 76 Small Madagascar hedgehog 40 14
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 63 22
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 32 12
No Yes Macropus eugenii 76_1.0 Tammar wallaby 48 15
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 56 21
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 43 16
No Yes Ornithorhynchus anatinus 76_5 Platypus 51 25
No Yes Saccoglossus kowalevskii v3.0   128 45
No Yes Petromyzon marinus 76_7.0 Sea lamprey 30 13
No Yes Meleagris gallopavo 76_2 Turkey 55 19
No Yes Gallus gallus 76_4 Chicken 50 15
No Yes Anas platyrhynchos 76_1.0 Mallard 43 16
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 49 16
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 49 16
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 51 21
No Yes Anolis carolinensis 76_2.0 Green anole 44 13
No Yes Xenopus laevis African clawed frog 32 20
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 44 18
No Yes Latimeria chalumnae 76_1 Coelacanth 58 23
No Yes Lepisosteus oculatus 76 Spotted gar 72 23
No Yes Gadus morhua 76_1 Atlantic cod 65 27
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 101 34
No Yes Takifugu rubripes 76_4 Torafugu 246 93
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 76 31
No Yes Oryzias latipes 76_1 Japanese medaka 63 24
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 69 27
No Yes Poecilia formosa 76 Amazon molly 65 23
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 85 34
No Yes Astyanax mexicanus 76 Mexican tetra 62 32
No Yes Danio rerio 76_9 Zebrafish 121 54
No Yes Oikopleura dioica   12 6
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 91 37
No Yes Ciona intestinalis 76 Vase tunicate 27 23
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 160 119
No Yes Adineta vaga   70 56
No Yes Octopus bimaculoides 280   41 23
No Yes Crassostrea gigas 22 Pacific oyster 130 81
No Yes Lottia gigantea Owl limpet 54 26
No Yes Helobdella robusta   31 17
No Yes Capitella sp. I   76 38
No Yes Danaus plexippus OGS1.0 Monarch butterfly 38 15
No Yes Heliconius melpomene Postman butterfly 34 14
No Yes Bombyx mori Domestic silkworm 32 22
No Yes Nasonia vitripennis Jewel wasp 34 17
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 84 35
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 22 8
No Yes Linepithema humile v1.1 Argentine ant 12 7
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 13 6
No Yes Solenopsis invicta v.2.2.3 Red fire ant 12 9
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 22 10
No Yes Atta cephalotes v1.1   15 10
No Yes Camponotus floridanus v3.3 Florida carpenter ant 31 18
No Yes Lucilia cuprina Australian sheep blowfly 38 10
No Yes Drosophila grimshawi 1.3   32 10
No Yes Drosophila willistoni 1.3   33 10
No Yes Drosophila pseudoobscura 2.13   38 15
No Yes Drosophila persimilis 1.3   47 22
No Yes Drosophila suzukii   34 11
No Yes Drosophila yakuba 1.3   32 11
No Yes Drosophila simulans 1.3   21 9
No Yes Drosophila sechellia 1.3   33 12
No Yes Drosophila melanogaster 76_5 Fruit fly 65 30
No Yes Drosophila erecta 1.3   34 11
No Yes Drosophila ananassae 1.3   33 11
No Yes Drosophila virilis 1.2   32 10
No Yes Drosophila mojavensis 1.3   33 11
No Yes Megaselia scalaris 22   14 12
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 39 13
No Yes Culex pipiens quinquefasciatus Southern house mosquito 29 14
No Yes Anopheles darlingi 22 American malaria mosquito 26 9
No Yes Anopheles gambiae 49_3j African malaria mosquito 35 11
No Yes Tribolium castaneum 3.0 Red flour beetle 36 14
No Yes Pediculus humanus corporis (Early assembly) Human body louse 34 10
No Yes Acyrthosiphon pisum Pea aphid 36 14
No Yes Rhodnius prolixus 22   34 13
No Yes Daphnia pulex Common water flea 53 25
No Yes Strigamia maritima 22   38 16
No Yes Sarcoptes scabiei   31 12
No Yes Tetranychus urticae Two-spotted spider mite 38 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 18 8
No Yes Pristionchus pacificus   19 12
No Yes Meloidogyne incognita Southern root-knot nematode 22 6
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   13 4
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 41 16
No Yes Caenorhabditis japonica   21 8
No Yes Caenorhabditis brenneri   33 19
No Yes Caenorhabditis remanei   22 8
No Yes Caenorhabditis elegans 76_235 Roundworm 25 11
No Yes Caenorhabditis briggsae 2   21 7
No Yes Trichinella spiralis 22   27 10
No Yes Hymenolepis microstoma   6 3
No Yes Echinococcus multilocularis   6 3
No Yes Echinococcus granulosus   7 4
No Yes Taenia solium Pork tapeworm 8 5
No Yes Schistosoma mansoni   4 4
No Yes Mnemiopsis leidyi Sea walnut 26 12
No Yes Thelohanellus kitauei   5 5
No Yes Acropora digitifera v1.0   68 39
No Yes Nematostella vectensis 1.0 Starlet sea anemone 34 27
No Yes Hydra vulgaris   22 12
No Yes Amphimedon queenslandica   36 26
No Yes Trichoplax adhaerens   9 6
No Yes Proterospongia sp. ATCC 50818   39 39
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0   1 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Ustilago maydis   2 2
No Yes Sphaerobolus stellatus v1.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0   2 2
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Gloeophyllum trabeumv1.0   2 2
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   3 2
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   3 2
No Yes Podospora anserina   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   2 2
No Yes Neurospora crassa OR74A   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   2 2
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma virens Gv29-8   2 2
No Yes Botrytis cinerea B05.10   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   4 3
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   2 2
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   4 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 2 2
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   4 4
No Yes Pyrenophora teres f. teres 22   2 2
No Yes Pyrenophora tritici-repentis   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Septoria musiva v1.0   2 2
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Ajellomyces dermatitidis SLH14081   2 2
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton verrucosum HKI 0517   2 2
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   2 2
No Yes Aspergillus nidulans FGSC A4   2 2
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   2 2
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   2 2
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   2 2
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   5 5
No Yes Dictyostelium purpureum   2 2
No Yes Entamoeba dispar 1.2   1 1
No Yes Selaginella moellendorffii   1 1
No Yes Picea abies Norway spruce 2 2
No Yes Eucalyptus grandis v201 Rose gum 4 4
No Yes Theobroma cacao B97-61/B2 v1 Cacao 2 2
No Yes Gossypium raimondii v221   4 4
No Yes Citrus clementina v165   3 3
No Yes Citrus sinensis v154 Sweet orange 5 5
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 2
No Yes Capsella rubella v183   4 4
No Yes Arabidopsis lyrata Lyrate rockcress 3 3
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes Carica papaya Papaya 3 3
No Yes Medicago truncatula Barrel medic 8 8
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 4 4
No Yes Cucumis sativus v122 Cucumber 3 3
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 5 5
No Yes Prunus persica v139 Peach 2 2
No Yes Linum usitatissimum v200 Flax 5 5
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Vitis vinifera Wine grape 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 5 5
No Yes Solanum lycopersicum v.2.3 Tomato 3 3
No Yes Solanum tuberosum Potato 1 1
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   4 4
No Yes Triticum urartu 22   14 14
No Yes Triticum aestivum 22 Bread wheat 11 11
No Yes Aegilops tauschii 22   13 13
No Yes Brachypodium distachyon Stiff brome 2 2
No Yes Oryza barthii 22 African wild rice 3 3
No Yes Oryza meridionalis 22   5 5
No Yes Oryza glumaepatula 22   5 5
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22   3 3
No Yes Oryza nivara 22   7 7
No Yes Oryza brachyantha 22 Malo sina 3 3
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 5 5
No Yes Oryza sativa v193 Rice 5 5
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 18 18
No Yes Setaria italica v164 Foxtail millet 6 6
No Yes Zea mays subsp. mays Maize 4 4
No Yes Zea mays v181 Maize 6 6
No Yes Sorghum bicolor Sorghum 4 4
No Yes Musa balbisiana Balbis banana 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   3 3
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   3 3
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Porphyridium purpureum 02_2012   5 5
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   27 23
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   16 16
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   3 3
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   3 3
No Yes Trypanosoma brucei gambiense v4.1   4 4
No Yes Trypanosoma brucei TREU927 v4.1   7 7
No Yes Ectocarpus siliculosus   6 6
No Yes Aureococcus anophagefferens   6 6
No Yes Albugo laibachii 22   2 2
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   3 3
No Yes Pythium aphanidermatum DAOM BR444 22   4 4
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   2 2
No Yes Phytophthora capsici   3 3
No Yes Hyaloperonospora arabidopsidis 22   2 2
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 6
No Yes Fragilariopsis cylindrus   1 1
No Yes Thalassiosira pseudonana CCMP1335   3 3
No Yes Perkinsus marinus ATCC 50983   23 22
No Yes Paramecium tetraurelia   3 3
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   2 2
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Symbiodinium minutum clade B1 v1.2   14 14
No Yes Naegleria gruberi   77 69
No Yes Trichomonas vaginalis   1 1
No Yes Guillardia theta CCMP2712 v1.0   12 12
No Yes Emiliania huxleyi CCMP1516   51 51
No Yes Leptolyngbya sp. PCC 7376   4 4
No Yes Pseudanabaena sp. PCC 7367   2 2
No Yes Acaryochloris marina MBIC11017   2 2
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   6 5
No Yes Geitlerinema sp. PCC 7407   2 2
No Yes Cyanothece sp. PCC 8802   3 3
No Yes Gloeocapsa sp. PCC 7428   3 3
No Yes Halothece sp. PCC 7418   2 2
No Yes Microcystis aeruginosa NIES-843   3 3
No Yes Gloeobacter violaceus PCC 7421   3 3
No Yes Rivularia sp. PCC 7116   7 7
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   2 2
No Yes Nostoc sp. PCC 7107   5 5
No Yes Nostoc punctiforme PCC 73102   3 3
No Yes Nostoc sp. PCC 7120   5 4
No Yes Nostoc sp. PCC 7524   6 5
No Yes Anabaena sp. 90   4 4
No Yes Conexibacter woesei DSM 14684   5 4
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Olsenella uli DSM 7084   1 1
No Yes Ilumatobacter coccineus   2 2
No Yes Acidimicrobium ferrooxidans DSM 10331   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Frankia symbiont of Datisca glomerata   2 2
No Yes Frankia sp. EAN1pec   2 2
No Yes Frankia alni ACN14a   3 3
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   2 2
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   6 6
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   2 2
No Yes Saccharopolyspora erythraea NRRL 2338   3 3
No Yes Amycolatopsis mediterranei U32   4 4
No Yes Kribbella flavida DSM 17836   4 4
No Yes Nocardioides sp. JS614   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Salinispora arenicola CNS-205   2 2
No Yes Salinispora tropica CNB-440   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   3 3
No Yes Micromonospora aurantiaca ATCC 27029   3 3
No Yes Actinoplanes sp. N902-109   5 5
No Yes Actinoplanes sp. SE50/110   3 3
No Yes Actinoplanes missouriensis 431   3 3
No Yes Rhodococcus jostii RHA1   2 2
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Xylanimonas cellulosilytica DSM 15894   1 1
No Yes Cellulomonas flavigena DSM 20109   2 2
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter sp. FB24   2 2
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Herpetosiphon aurantiacus DSM 785   3 3
No Yes Roseiflexus sp. RS-1   1 1
No Yes Chloroflexus sp. MS-G   2 2
No Yes Chloroflexus sp. Y-400-fl   2 2
No Yes Chloroflexus aggregans DSM 9485   2 2
No Yes Chloroflexus aurantiacus J-10-fl   2 2
No Yes Deinococcus deserti VCD115   2 2
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus proteolyticus MRP   2 2
No Yes Deinococcus radiodurans R1   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Thermus scotoductus SA-01   1 1
No Yes Thermus thermophilus HB27   1 1
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   1 1
No Yes Clostridium clariflavum DSM 19732   2 1
No Yes Ruminococcus sp.   1 1
No Yes Thermincola potens JR   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   2 2
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Clostridium sticklandii DSM 519   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Coprococcus sp. ART55/1   1 1
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Clostridium sp. BNL1100   1 1
No Yes Clostridium novyi NT   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium botulinum A str. ATCC 3502   4 3
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor bescii DSM 6725   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus kefiranofaciens ZW3   1 1
No Yes Lactobacillus amylovorus GRL1118   2 2
No Yes Lactobacillus helveticus DPC 4571   2 2
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   1 1
No Yes Lactobacillus buchneri NRRL B-30929   2 2
No Yes Lactobacillus buchneri   2 2
No Yes Lactobacillus brevis ATCC 367   1 1
No Yes Lactobacillus acidophilus 30SC   2 2
No Yes Pediococcus claussenii ATCC BAA-344   1 1
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   2 2
No Yes Paenibacillus mucilaginosus 3016   4 4
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5   1 1
No Yes Geobacillus kaustophilus HTA426   1 1
No Yes Geobacillus sp. GHH01   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Gemmatimonas aurantiaca T-27   2 2
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   2 2
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobaculum parvum NCIB 8327   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   4 4
No Yes Saprospira grandis str. Lewin   1 1
No Yes Niastella koreensis GR20-10   3 3
No Yes Chitinophaga pinensis DSM 2588   2 2
No Yes Salinibacter ruber M8   1 1
No Yes Rhodothermus marinus DSM 4252   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Cyclobacterium marinum DSM 745   4 4
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Fibrella aestuarina   5 5
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   2 2
No Yes Spirosoma linguale DSM 74   10 10
No Yes Runella slithyformis DSM 19594   4 4
No Yes Parabacteroides distasonis ATCC 8503   6 6
No Yes Paludibacter propionicigenes WB4   2 2
No Yes Odoribacter splanchnicus DSM 20712   11 11
No Yes Bacteroides sp. CF50   4 4
No Yes Prevotella intermedia 17   3 3
No Yes Prevotella ruminicola 23   2 2
No Yes Porphyromonas asaccharolytica DSM 20707   1 1
No Yes Alistipes finegoldii DSM 17242   1 1
No Yes Bacteroides helcogenes P 36-108   5 5
No Yes Bacteroides vulgatus ATCC 8482   2 2
No Yes Bacteroides thetaiotaomicron VPI-5482   5 5
No Yes Bacteroides fragilis YCH46   8 8
No Yes Pedobacter saltans DSM 12145   4 4
No Yes Solitalea canadensis DSM 3403   2 2
No Yes Pedobacter heparinus DSM 2366   3 3
No Yes Fluviicola taffensis DSM 16823   4 4
No Yes Owenweeksia hongkongensis DSM 17368   4 4
No Yes Zunongwangia profunda SM-A87   4 4
No Yes Gramella forsetii KT0803   3 3
No Yes Lacinutrix sp. 5H-3-7-4   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Croceibacter atlanticus HTCC2559   6 6
No Yes Aequorivita sublithincola DSM 14238   3 3
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Flavobacteriaceae bacterium 3519-10   2 2
No Yes Polaribacter sp. MED152   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Weeksella virosa DSM 16922   2 2
No Yes Flavobacterium indicum GPTSA100-9   1 1
No Yes Flavobacterium psychrophilum JIP02/86   2 1
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Rhodopirellula baltica SH 1   6 5
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Coraliomargarita akajimensis DSM 45221   2 2
No Yes Opitutus terrae PB90-1   2 2
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Turneriella parva DSM 21527   10 9
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   6 5
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Treponema azotonutricium ZAS-9   2 2
No Yes Treponema brennaborense DSM 12168   2 2
No Yes Treponema paraluiscuniculi Cuniculi A   1 1
No Yes Treponema pallidum subsp. pallidum SS14   2 2
No Yes Treponema denticola ATCC 35405   1 1
No Yes Spirochaeta africana DSM 8902   1 1
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Flexistipes sinusarabici DSM 4947   1 1
No Yes Kosmotoga olearia TBF 19.5.1   1 1
No Yes Thermosipho africanus TCF52B   3 3
No Yes Thermotoga lettingae TMO   2 2
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   2 2
No Yes Candidatus Solibacter usitatus Ellin6076   9 9
No Yes Granulicella tundricola MP5ACTX9   6 6
No Yes Granulicella mallensis MP5ACTX8   4 4
No Yes Candidatus Koribacter versatilis Ellin345   4 4
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Terriglobus roseus DSM 18391   7 7
No Yes Thermodesulfovibrio yellowstonii DSM 11347   1 1
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes candidate division WWE3 bacterium RAAC2_WWE3_1   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Bdellovibrio bacteriovorus HD100   5 2
No Yes Nitratifractor salsuginis DSM 16511   1 1
No Yes Arcobacter nitrofigilis DSM 7299   1 1
No Yes Campylobacter lari RM2100   1 1
No Yes Campylobacter curvus 525.92   1 1
No Yes Sulfurimonas denitrificans DSM 1251   1 1
No Yes Syntrophus aciditrophicus SB   1 1
No Yes Desulfomonile tiedjei DSM 6799   8 7
No Yes Syntrophobacter fumaroxidans MPOB   2 1
No Yes Desulfatibacillum alkenivorans AK-01   6 3
No Yes Desulfobacterium autotrophicum HRM2   2 2
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Desulfovibrio salexigens DSM 2638   1 1
No Yes Hippea maritima DSM 10411   1 1
No Yes Geobacter daltonii FRC-32   4 3
No Yes Geobacter uraniireducens Rf4   2 2
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Pelobacter carbinolicus DSM 2380   1 1
No Yes Haliangium ochraceum DSM 14365   8 6
No Yes Sorangium cellulosum 'So ce 56'   16 15
No Yes Anaeromyxobacter sp. Fw109-5   3 2
No Yes Anaeromyxobacter dehalogenans 2CP-1   2 2
No Yes Stigmatella aurantiaca DW4/3-1   6 6
No Yes Corallococcus coralloides DSM 2259   9 8
No Yes Myxococcus xanthus DK 1622   6 6
No Yes Myxococcus fulvus HW-1   10 10
No Yes Methylibium petroleiphilum PM1   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   1 1
No Yes Burkholderia sp. RPE64   2 2
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   3 3
No Yes Polaromonas sp. JS666   1 1
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Nitrosomonas sp. Is79A3   3 3
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Sideroxydans lithotrophicus ES-1   1 1
No Yes Magnetococcus marinus MC-1   1 1
No Yes Parvularcula bermudensis HTCC2503   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Sphingomonas wittichii RW1   1 1
No Yes Dinoroseobacter shibae DFL 12   2 2
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Micavibrio aeruginosavorus ARL-13   1 1
No Yes alpha proteobacterium HIMB59   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Parvibaculum lavamentivorans DS-1   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Agrobacterium radiobacter K84   2 1
No Yes Mesorhizobium sp. BNC1   2 2
No Yes Pelagibacterium halotolerans B2   1 1
No Yes Saccharophagus degradans 2-40   3 3
No Yes Teredinibacter turnerae T7901   4 4
No Yes Cellvibrio japonicus Ueda107   2 1
No Yes Aggregatibacter actinomycetemcomitans D7S-1   1 1
No Yes Haemophilus parainfluenzae T3T1   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   2 2
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   2 2
No Yes Glaciecola nitratireducens FR1064   2 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Kangiella koreensis DSM 16069   1 1
No Yes Hahella chejuensis KCTC 2396   2 2
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Providencia stuartii MRSN 2154   2 1
No Yes Pantoea sp. At-9b   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Thiomicrospira crunogena XCL-2   1 1
No Yes Cenarchaeum symbiosum A   7 7
No Yes Candidatus Nitrosopumilus sp. AR2   2 2
No Yes Nitrosopumilus maritimus SCM1   1 1
No Yes Desulfurococcus fermentans DSM 16532   1 1
No Yes Desulfurococcus kamchatkensis 1221n   1 1
No Yes Sulfolobus tokodaii str. 7   3 2
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Methanocella arvoryzae MRE50   1 1
No Yes Methanocella paludicola SANAE   2 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta concilii GP6   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosarcina barkeri str. Fusaro   3 3
No Yes Methanosphaerula palustris E1-9c   3 3
No Yes Methanoplanus petrolearius DSM 11571   2 2
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Pyrococcus furiosus COM1   2 2
No Yes Natrinema sp. J7-2   1 1
No Yes Halogeometricum borinquense DSM 11551   1 1
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 48 17
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 54 26
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 37 13
No Yes Ascaris suum Victoria/Ghent Pig roundworm 21 8
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 24 10
No Yes Ajellomyces dermatitidis ER-3   2 2
No Yes Aspergillus fumigatus A1163   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 2
No Yes Hordeum vulgare 22 Domesticated barley 15 15
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 5 5
No Yes Trypanosoma brucei Lister 427 v4.1   6 6
No Yes Plasmodium falciparum HB3   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   3 3
No Yes Oscillatoria acuminata PCC 6304   2 2
No Yes Arthrospira platensis NIES-39   2 2
No Yes Cyanothece sp. PCC 7822   4 4
No Yes Cyanothece sp. PCC 7425   2 2
No Yes Cyanothece sp. PCC 7424   2 2
No Yes Cyanothece sp. ATCC 51142   4 4
No Yes Cyanothece sp. PCC 8801   4 4
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   2 2
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   4 4
No Yes Stanieria cyanosphaera PCC 7437   2 2
No Yes Calothrix parietina Calothrix sp. PCC 6303   3 3
No Yes Cylindrospermum stagnale PCC 7417   4 4
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Frankia sp. EuI1c   3 3
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   5 5
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces venezuelae ATCC 10712   3 3
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   3 3
No Yes Amycolatopsis mediterranei RB   4 4
No Yes Amycolatopsis mediterranei S699   4 4
No Yes Amycolatopsis mediterranei S699   4 4
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Rhodococcus pyridinivorans SB3094   1 1
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   2 1
No Yes Mycobacterium sp. KMS   1 1
No Yes Mycobacterium sp. MCS   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis CAS/NITR204   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   2 2
No Yes Corynebacterium pseudotuberculosis PAT10   1 1
No Yes Corynebacterium glutamicum MB001   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   1 1
No Yes Actinomyces viscosus C505   1 1
No Yes Chthonomonas calidirosea T49   1 1
No Yes Thermus oshimai JL-2   1 1
No Yes Thermus thermophilus JL-18   1 1
No Yes Thermus thermophilus SG0.5JP17-16   2 2
No Yes Thermus thermophilus HB8   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   2 2
No Yes Desulfosporosinus meridiei DSM 13257   2 2
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   1 1
No Yes Clostridium saccharobutylicum DSM 13864   3 3
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum F str. 230613   2 2
No Yes Clostridium botulinum F str. Langeland   2 2
No Yes Clostridium botulinum B1 str. Okra   3 2
No Yes Clostridium botulinum Ba4 str. 657   5 3
No Yes Clostridium botulinum A2 str. Kyoto   5 3
No Yes Clostridium botulinum A3 str. Loch Maree   3 2
No Yes Clostridium botulinum A str. Hall   3 2
No Yes Clostridium botulinum A str. ATCC 19397   3 2
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus helveticus R0052   2 2
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus helveticus CNRZ32   2 2
No Yes Lactobacillus brevis KB290   1 1
No Yes Lactobacillus acidophilus La-14   1 1
No Yes Lactobacillus acidophilus NCFM   1 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Paenibacillus mucilaginosus KNP414   4 4
No Yes Paenibacillus mucilaginosus K02   4 4
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   3 3
No Yes Echinicola vietnamensis DSM 17526   4 4
No Yes Emticicia oligotrophica DSM 17448   3 3
No Yes Alistipes shahii WAL 8301   1 1
No Yes Bacteroides fragilis 638R   8 8
No Yes Bacteroides fragilis NCTC 9343   5 5
No Yes Nonlabens dokdonensis DSW-6   1 1
No Yes Psychroflexus torquis ATCC 700755   1 1
No Yes Riemerella anatipestifer RA-CH-2   1 1
No Yes Riemerella anatipestifer RA-GD   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   5 4
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Brachyspira pilosicoli P43/6/78   1 1
No Yes Borrelia miyamotoi LB-2001   1 1
No Yes Treponema pedis str. T A4   1 1
No Yes Treponema pallidum str. Fribourg-Blanc   1 1
No Yes Treponema pallidum subsp. pertenue str. Gauthier   1 1
No Yes Treponema pallidum subsp. pertenue str. CDC2   1 1
No Yes Treponema pallidum subsp. pertenue str. SamoaD   1 1
No Yes Treponema pallidum subsp. pallidum str. Mexico A   1 1
No Yes Treponema pallidum subsp. pallidum str. Chicago   1 1
No Yes Treponema pallidum subsp. pallidum DAL-1   1 1
No Yes Treponema pallidum subsp. pallidum str. Nichols   1 1
No Yes Leptospirillum ferriphilum ML-04   2 2
No Yes Bdellovibrio bacteriovorus str. Tiberius   4 2
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   1 1
No Yes Campylobacter jejuni RM1221   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2544   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2538   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2426   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2425   1 1
No Yes Campylobacter jejuni subsp. jejuni PT14   1 1
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   1 1
No Yes Campylobacter jejuni subsp. jejuni S3   1 1
No Yes Campylobacter jejuni subsp. jejuni M1   1 1
No Yes Campylobacter jejuni subsp. jejuni IA3902   1 1
No Yes Campylobacter jejuni subsp. jejuni 81116   1 1
No Yes Campylobacter jejuni subsp. jejuni 81-176   1 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   1 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   4 4
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   2 2
No Yes Sorangium cellulosum So0157-2   15 13
No Yes Anaeromyxobacter sp. K   5 4
No Yes Anaeromyxobacter dehalogenans 2CP-C   2 2
No Yes Myxococcus stipitatus DSM 14675   5 5
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   2 2
No Yes Burkholderia pseudomallei BPC006   2 2
No Yes Burkholderia pseudomallei 1026b   3 3
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Taylorella equigenitalis ATCC 35865   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Micavibrio aeruginosavorus EPB   1 1
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Sinorhizobium fredii USDA 257   2 2
No Yes Rhizobium tropici CIAT 899   3 2
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Aggregatibacter actinomycetemcomitans ANH9381   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio nigripulchritudo VibrioScope   3 3
No Yes Glaciecola psychrophila 170   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   2 2
No Yes Alteromonas macleodii str. 'English Channel 615'   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   2 2
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   2 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   2 2
No Yes Alteromonas macleodii ATCC 27126   2 2
No Yes Alcanivorax dieselolei B5   1 1
No Yes Thalassolituus oleivorans MIL-1   3 3
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   2 2
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Acinetobacter baumannii TYTH-1   2 2
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Methanomethylovorans hollandica DSM 15978   1 1
No Yes Methanoregula formicica Methanoregula formicicum SMSP   4 2
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 93 48
No Yes Homo sapiens (NCBI version) Human 62 27
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 47 14
No Yes Heliconius numata (Incomplete)   6 6
No Yes Loa loa v3.3 (Request) Eye worm 15 5
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 18 13
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 14 5
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 5 5
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 4 4
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 3 3
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 48 15
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 49 16
No Yes Gorilla gorilla 69_3.1 Western gorilla 38 14
No Yes Pongo abelii 69_2 Sumatran orangutan 40 13
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 41 15
No Yes Macaca mulatta 69_1 Rhesus monkey 45 13
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 45 14
No Yes Otolemur garnettii 69_3 Small-eared galago 42 15
No Yes Microcebus murinus 69_1 Gray mouse lemur 44 15
No Yes Rattus norvegicus 69_3.4 Norway rat 40 17
No Yes Mus musculus 69_38 House mouse 47 14
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 46 14
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 36 13
No Yes Cavia porcellus 69_3 Domestic guinea pig 40 15
No Yes Oryctolagus cuniculus 69_2 Rabbit 40 14
No Yes Ochotona princeps 69 American pika 46 14
No Yes Tupaia belangeri 69 Northern tree shrew 44 14
No Yes Sus scrofa 69_10.2 Pig 29 18
No Yes Bos taurus 69_3.1 Cattle 39 13
No Yes Vicugna pacos 69_1 Alpaca 30 9
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 47 14
No Yes Mustela putorius furo 69_1.0 Domestic ferret 48 16
No Yes Ailuropoda melanoleuca 69_1 Giant panda 45 15
No Yes Canis familiaris 69_3.1 Dog 50 17
No Yes Felis catus 69 Domestic cat 38 14
No Yes Equus caballus 69_2 Horse 48 19
No Yes Myotis lucifugus 69_2.0 Little brown bat 46 16
No Yes Pteropus vampyrus 69_1 Large flying fox 46 14
No Yes Sorex araneus 69_1 European shrew 30 10
No Yes Erinaceus europaeus 69 Western European hedgehog 37 11
No Yes Procavia capensis 69_1 Cape rock hyrax 46 13
No Yes Loxodonta africana 69_3 African savanna elephant 46 14
No Yes Echinops telfairi 69 Small Madagascar hedgehog 40 14
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 47 15
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 32 12
No Yes Macropus eugenii 69_1.0 Tammar wallaby 48 15
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 39 14
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 43 16
No Yes Ornithorhynchus anatinus 69_5 Platypus 43 21
No Yes Petromyzon marinus 69_7.0 Sea lamprey 28 11
No Yes Meleagris gallopavo 69_2 Turkey 43 15
No Yes Gallus gallus 69_2 Chicken 41 15
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 49 16
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 43 16
No Yes Anolis carolinensis 69_2.0 Green anole 47 16
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 42 17
No Yes Latimeria chalumnae 69_1 Coelacanth 47 19
No Yes Gadus morhua 69_1 Atlantic cod 60 22
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 70 25
No Yes Takifugu rubripes 69_4 Torafugu 63 19
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 67 25
No Yes Oryzias latipes 69_1 Japanese medaka 60 21
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 69 27
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 69 24
No Yes Danio rerio 69_9 Zebrafish 76 30
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 26 14
No Yes Ciona intestinalis 69 Vase tunicate 26 22
No Yes Drosophila melanogaster 69_5 Fruit fly 34 11
No Yes Caenorhabditis elegans 69_215 Roundworm 21 7
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome)   5 5
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes 2_050719S (meta-genome)   21 21
No Yes 2_Base_of_chrolophyll_max (meta-genome)   4 4
No Yes 3_050719R (meta-genome)   22 21
No Yes 3_Below_base_of_euphotic (meta-genome)   3 3
No Yes 4_050719Q (meta-genome)   35 35
No Yes 4_Deep_abyss (meta-genome)   9 9
No Yes 5_050719P (meta-genome)   33 32
No Yes 5_Below_upper_mesopelagic (meta-genome)   4 4
No Yes 6_Upper_euphotic (meta-genome)   4 4
No Yes 7_Oxygen_minimum_layer (meta-genome)   5 5
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   6 6
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   5 5
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   3 3
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   1 1
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   9 8
No Yes Combined (meta-genome)   16 16
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   9 9
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   51 51
No Yes Dump top (Dump top) (meta-genome)   65 65
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   11 11
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   13 13
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   5 5
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   14 14
No Yes Fungus garden combined (combined) (meta-genome)   8 8
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   10 10
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   12 12
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   4 4
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   14 14
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   28 28
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   19 19
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   3 3
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   5 5
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   6 6
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   34 34
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   36 36
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   99 99
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   28 28
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   10 10
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   28 28
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   28 28
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   7 7
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   49 49
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   23 23
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes Mouse Gut Community lean2 (meta-genome)   2 2
No Yes NCBI 2017_08 genome   53873 36667
No Yes Nymph Lake Bulk Water (meta-genome)   1 1
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   70 69
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   33 33
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   15 15
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   13 13
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   8 8
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   12 12
No Yes Sludge/US, Jazz Assembly (meta-genome)   4 4
No Yes Sludge/US, Phrap Assembly (meta-genome)   6 6
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   63 63
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   77 77
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   94 94
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   50 50
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   49 49
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   102 102
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   112 112
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   9 9
No Yes STRING v9.0.5 (STRING)   2664 1376
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   11 11
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   88 88
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   22 22
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   38459 25238
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   2 2
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   22 22
No Yes Global Ocean Sampling Expedition (GOS)   885 873
No Yes NCBI plasmid sequences (Plasmids)   24 24
No Yes NCBI viral sequences (Viral)   14 12
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   17 17
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   100 100
No Yes TargetDB (Targets)   67 65
No Yes UniProt viral sequences (Viral)   4 4

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