Select to display Genome Domains Proteins
No Yes ALL 20411 20411
No Yes Homo sapiens 76_38 Human 13 13
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 2 2
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Papio anubis 76 Olive baboon 2 2
No Yes Macaca mulatta 76_1 Rhesus monkey 4 4
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 4 4
No Yes Otolemur garnettii 76_3 Small-eared galago 2 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 12 12
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 2 2
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 2 2
No Yes Ochotona princeps 76 American pika 2 2
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 2 2
No Yes Bos taurus 76_3.1 Cattle 2 2
No Yes Ovis aries 76_3.1 Sheep 2 2
No Yes Vicugna pacos 76_1 Alpaca 2 2
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2 2
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 3 3
No Yes Equus caballus 76_2 Horse 2 2
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 76_1 Large flying fox 2 2
No Yes Sorex araneus 76_1 European shrew 2 2
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 2 2
No Yes Echinops telfairi 76 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 3 3
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 1 1
No Yes Saccoglossus kowalevskii v3.0 2 2
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 76_2.0 Green anole 2 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 76_1 Coelacanth 3 3
No Yes Lepisosteus oculatus 76 Spotted gar 2 2
No Yes Gadus morhua 76_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 76_4 Torafugu 5 5
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 76_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 2 2
No Yes Poecilia formosa 76 Amazon molly 2 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 2 2
No Yes Danio rerio 76_9 Zebrafish 3 3
No Yes Oikopleura dioica 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga 4 4
No Yes Octopus bimaculoides 280 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta 1 1
No Yes Capitella sp. I 1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1 1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3 1 1
No Yes Drosophila willistoni 1.3 1 1
No Yes Drosophila pseudoobscura 2.13 1 1
No Yes Drosophila persimilis 1.3 1 1
No Yes Drosophila suzukii 1 1
No Yes Drosophila yakuba 1.3 1 1
No Yes Drosophila simulans 1.3 1 1
No Yes Drosophila sechellia 1.3 1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 1 1
No Yes Drosophila erecta 1.3 1 1
No Yes Drosophila ananassae 1.3 1 1
No Yes Drosophila virilis 1.2 1 1
No Yes Drosophila mojavensis 1.3 1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Rhodnius prolixus 22 1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Strigamia maritima 22 1 1
No Yes Sarcoptes scabiei 1 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus 1 1
No Yes Meloidogyne incognita Southern root-knot nematode 4 4
No Yes Meloidogyne hapla 1 1
No Yes Onchocerca volvulus 22 1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica 2 2
No Yes Caenorhabditis brenneri 1 1
No Yes Caenorhabditis remanei 1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 3 3
No Yes Caenorhabditis briggsae 2 1 1
No Yes Trichinella spiralis 22 1 1
No Yes Hymenolepis microstoma 2 2
No Yes Echinococcus multilocularis 2 2
No Yes Echinococcus granulosus 2 2
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni 4 4
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Thelohanellus kitauei 1 1
No Yes Acropora digitifera v1.0 1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Hydra vulgaris 1 1
No Yes Amphimedon queenslandica 3 3
No Yes Trichoplax adhaerens 1 1
No Yes Capsaspora owczarzaki ATCC 30864 1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0 1 1
No Yes Mortierella verticillata NRRL 6337 1 1
No Yes Phycomyces blakesleeanus 1 1
No Yes Rhizopus oryzae RA 99-880 1 1
No Yes Mucor circinelloides 1 1
No Yes Rhizomucor miehei CAU432 1 1
No Yes Malassezia globosa CBS 7966 2 2
No Yes Sporisorium reilianum 22 1 1
No Yes Mixia osmundae IAM 14324 v1.0 1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0 1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3 1 1
No Yes Melampsora laricis-populina 1 1
No Yes Rhodotorula graminis WP1 v1.0 1 1
No Yes Sporobolomyces roseus IAM 13481 1 1
No Yes Microbotryum violaceum 22 1 1
No Yes Wallemia sebi v1.0 1 1
No Yes Sphaerobolus stellatus v1.0 1 1
No Yes Piloderma croceum F 1598 v1.0 1 1
No Yes Serpula lacrymans var. lacrymans S7.9 1 1
No Yes Coniophora puteana 1 1
No Yes Hydnomerulius pinastri v2.0 1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0 1 1
No Yes Pisolithus tinctorius Marx 270 v1.0 1 1
No Yes Scleroderma citrinum Foug A v1.0 1 1
No Yes Coprinopsis cinerea okayama7 130 v3 1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0 1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0 1 1
No Yes Hebeloma cylindrosporum h7 v2.0 1 1
No Yes Laccaria bicolor S238N-H82 1 1
No Yes Agaricus bisporus var. bisporus 1 1
No Yes Schizophyllum commune 1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0 1 1
No Yes Heterobasidion annosum 1 1
No Yes Gloeophyllum trabeum v1.0 1 1
No Yes Punctularia strigosozonata v1.0 1 1
No Yes Sebacina vermifera MAFF 305830 v1.0 1 1
No Yes Fomitiporia mediterranea v1.0 1 1
No Yes Tulasnella calospora AL13/4D v1.0 1 1
No Yes Postia placenta 2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0 1 1
No Yes Fomitopsis pinicola v1.0 1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0 1 1
No Yes Dichomitus squalens 1 1
No Yes Trametes versicolor v1.0 1 1
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0 1 1
No Yes Apiospora montagnei NRRL 25634 v1.0 1 1
No Yes Magnaporthe grisea 70-15 1 1
No Yes Podospora anserina 1 1
No Yes Sporotrichum thermophile ATCC 42464 1 1
No Yes Thielavia terrestris NRRL 8126 1 1
No Yes Chaetomium globosum CBS 148.51 1 1
No Yes Neurospora tetrasperma 1 1
No Yes Neurospora discreta FGSC 8579 1 1
No Yes Neurospora crassa OR74A 1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102 1 1
No Yes Verticillium dahliae VdLs.17 1 1
No Yes Acremonium alcalophilum v 1.0 1 1
No Yes Glomerella graminicola 22 1 1
No Yes Fusarium graminearum 1 1
No Yes Nectria haematococca mpVI 1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286 1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0 1 1
No Yes Trichoderma atroviride 1 1
No Yes Trichoderma citrinoviride v1.0 1 1
No Yes Trichoderma reesei 1.2 1 1
No Yes Trichoderma virens Gv29-8 1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0 1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0 1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10 1 1
No Yes Sclerotinia sclerotiorum 1 1
No Yes Blumeria graminis 22 1 1
No Yes Didymella exigua CBS 183.55 v1.0 1 1
No Yes Leptosphaeria maculans 22 1 1
No Yes Setosphaeria turcica v1.0 1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0 1 1
No Yes Cochliobolus victoriae FI3 v1.0 1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0 1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Cochliobolus lunatus m118 v2.0 1 1
No Yes Pyrenophora teres f. teres 22 1 1
No Yes Pyrenophora tritici-repentis 1 1
No Yes Stagonospora nodorum 1 1
No Yes Mycosphaerella graminicola IPO323 1 1
No Yes Zasmidium cellare ATCC 36951 v1.0 1 1
No Yes Dothistroma septosporum 1 1
No Yes Septoria musiva v1.0 1 1
No Yes Mycosphaerella fijiensis CIRAD86 1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 1 1
No Yes Coccidioides posadasii RMSCC 3488 1 1
No Yes Coccidioides immitis RS 1 1
No Yes Ajellomyces dermatitidis SLH14081 1 1
No Yes Histoplasma capsulatum class NAmI strain WU24 1 1
No Yes Microsporum canis CBS 113480 1 1
No Yes Trichophyton equinum CBS 127.97 1 1
No Yes Arthroderma benhamiae CBS 112371 1 1
No Yes Trichophyton tonsurans CBS 112818 1 1
No Yes Trichophyton rubrum CBS 118892 2 2
No Yes Aspergillus zonatus v1.0 1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255 1 1
No Yes Penicillium chrysogenum v1.0 1 1
No Yes Aspergillus acidus v1.0 1 1
No Yes Aspergillus fumigatus Af293 1 1
No Yes Aspergillus brasiliensis v1.0 1 1
No Yes Aspergillus nidulans FGSC A4 1 1
No Yes Aspergillus sydowii v1.0 1 1
No Yes Aspergillus versicolor v1.0 1 1
No Yes Aspergillus glaucus 1 1
No Yes Aspergillus carbonarius ITEM 5010 1 1
No Yes Neosartorya fischeri NRRL 181 1 1
No Yes Aspergillus terreus NIH2624 1 1
No Yes Aspergillus tubingensis v1.0 1 1
No Yes Aspergillus wentii v1.0 1 1
No Yes Aspergillus oryzae RIB40 1 1
No Yes Aspergillus niger 22 1 1
No Yes Aspergillus niger ATCC 1015 1 1
No Yes Aspergillus flavus NRRL3357 1 1
No Yes Aspergillus clavatus NRRL 1 1 1
No Yes Penicillium marneffei ATCC 18224 1 1
No Yes Tuber melanosporum Mel28 22 1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0 1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0 1 1
No Yes Pichia membranifaciens v1.0 1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0 1 1
No Yes Candida dubliniensis CD36 1 1
No Yes Candida tropicalis MYA-3404 1 1
No Yes Candida parapsilosis 1 1
No Yes Candida albicans SC5314 1 1
No Yes Lodderomyces elongisporus NRRL YB-4239 1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0 1 1
No Yes Pichia stipitis CBS 6054 1 1
No Yes Candida guilliermondii ATCC 6260 1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0 1 1
No Yes Debaromyces hansenii 1 1
No Yes Wickerhamomyces anomalus 1 1
No Yes Pichia pastoris GS115 1 1
No Yes Yarrowia lipolytica CLIB122 1 1
No Yes Candida lusitaniae ATCC 42720 1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0 1 1
No Yes Catenaria anguillulae PL171 v1.0 1 1
No Yes Allomyces macrogynus ATCC 38327 2 2
No Yes Spizellomyces punctatus DAOM BR117 1 1
No Yes Dictyostelium discoideum 1 1
No Yes Dictyostelium purpureum 1 1
No Yes Selaginella moellendorffii 2 2
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221 8 8
No Yes Citrus clementina v165 2 2
No Yes Citrus sinensis v154 Sweet orange 4 4
No Yes Thellungiella halophila v173 2 2
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 2
No Yes Capsella rubella v183 2 2
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 2 2
No Yes Glycine max v109 Soybean 3 3
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 7 7
No Yes Prunus persica v139 Peach 2 2
No Yes Linum usitatissimum v200 Flax 3 3
No Yes Manihot esculenta v147 Cassava 4 4
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Actinidia chinensis Hongyang 2 2
No Yes Aquilegia coerulea v195 1 1
No Yes Triticum urartu 22 1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22 1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 2 2
No Yes Oryza meridionalis 22 1 1
No Yes Oryza glumaepatula 22 2 2
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22 2 2
No Yes Oryza nivara 22 2 2
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocycla var. pubescens Kikko-chiku 2 2
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 3 3
No Yes Zea mays subsp. mays Maize 3 3
No Yes Zea mays v181 Maize 3 3
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22 1 1
No Yes Physcomitrella patens 1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2 1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0 1 1
No Yes Chlorella variabilis sp. NC64A 1 1
No Yes Chlorella vulgaris 1 1
No Yes Volvox carteri f. nagariensis 1 1
No Yes Volvox carteri v199 1 1
No Yes Chlamydomonas reinhardtii 4.0 1 1
No Yes Ostreococcus sp. RCC809 1 1
No Yes Ostreococcus lucimarinus CCE9901 1 1
No Yes Ostreococcus tauri 1 1
No Yes Bathycoccus prasinos 1 1
No Yes Micromonas sp. RCC299 1 1
No Yes Micromonas pusilla CCMP1545 v3.0 1 1
No Yes Cyanidioschyzon merolae 1 1
No Yes Porphyridium purpureum 02_2012 1 1
No Yes Thecamonas trahens ATCC 50062 1 1
No Yes Bigelowiella natans CCMP2755 22 1 1
No Yes Cyanophora paradoxa 1 1
No Yes Leishmania mexicana 2.4 1 1
No Yes Leishmania major strain Friedlin 1 1
No Yes Leishmania infantum JPCM5 2.4 1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4 1 1
No Yes Trypanosoma vivax 1 1
No Yes Trypanosoma cruzi strain CL Brener 1 1
No Yes Trypanosoma congolense 2.4 1 1
No Yes Trypanosoma brucei gambiense v4.1 1 1
No Yes Trypanosoma brucei TREU927 v4.1 1 1
No Yes Ectocarpus siliculosus 1 1
No Yes Aureococcus anophagefferens 1 1
No Yes Albugo laibachii 22 1 1
No Yes Pythium iwayamai DAOM BR242034 22 1 1
No Yes Pythium arrhenomanes ATCC 12531 22 1 1
No Yes Pythium ultimum v1.7-2 1 1
No Yes Pythium aphanidermatum DAOM BR444 22 1 1
No Yes Pythium irregulare DAOM BR486 22 1 1
No Yes Pythium vexans DAOM BR484 22 1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1 1 1
No Yes Phytophthora infestans T30-4 1 1
No Yes Phytophthora capsici 1 1
No Yes Hyaloperonospora arabidopsidis 22 1 1
No Yes Phaeodactylum tricornutum CCAP 1055/1 1 1
No Yes Fragilariopsis cylindrus 2 2
No Yes Thalassiosira pseudonana CCMP1335 1 1
No Yes Paramecium tetraurelia 2 2
No Yes Tetrahymena thermophila SB210 1 1 1
No Yes Ichthyophthirius multifiliis strain G5 1 1
No Yes Guillardia theta CCMP2712 v1.0 1 1
No Yes Emiliania huxleyi CCMP1516 1 1
No Yes Rubrobacter xylanophilus DSM 9941 1 1
No Yes Thermodesulfobium narugense DSM 14796 1 1
No Yes Coprothermobacter proteolyticus DSM 5265 1 1
No Yes Ammonifex degensii KC4 1 1
No Yes Acetohalobium arabaticum DSM 5501 1 1
No Yes Salinibacter ruber M8 1 1
No Yes Candidatus Cardinium hertigii 1 1
No Yes Thermodesulfatator indicus DSM 15286 1 1
No Yes Thermodesulfobacterium sp. OPB45 1 1
No Yes Thermodesulfovibrio yellowstonii DSM 11347 1 1
No Yes Ilyobacter polytropus DSM 2926 1 1
No Yes Acidithiobacillus ferrivorans SS3 1 1
No Yes Acidithiobacillus caldus SM-1 1 1
No Yes Acidithiobacillus ferrooxidans ATCC 53993 1 1
No Yes Desulfobacca acetoxidans DSM 11109 1 1
No Yes Desulfohalobium retbaense DSM 5692 1 1
No Yes Dechloromonas aromatica RCB 1 1
No Yes Thauera sp. MZ1T 1 1
No Yes Azoarcus sp. KH32C 1 1
No Yes Azoarcus sp. BH72 1 1
No Yes Aromatoleum aromaticum EbN1 1 1
No Yes Dechlorosoma suillum PS 1 1
No Yes Pseudogulbenkiania sp. NH8B 1 1
No Yes Laribacter hongkongensis HLHK9 1 1
No Yes Chromobacterium violaceum ATCC 12472 1 1
No Yes Neisseria meningitidis alpha14 1 1
No Yes Neisseria meningitidis FAM18 1 1
No Yes Neisseria lactamica 020-06 1 1
No Yes Neisseria gonorrhoeae NCCP11945 1 1
No Yes syncytium symbiont of Diaphorina citri 1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1 1 1
No Yes beta proteobacterium CB 1 1
No Yes Methylibium petroleiphilum PM1 1 1
No Yes Thiomonas arsenitoxydans 1 1
No Yes Thiomonas intermedia K12 1 1
No Yes Rubrivivax gelatinosus IL144 1 1
No Yes Leptothrix cholodnii SP-6 1 1
No Yes Burkholderia rhizoxinica HKI 454 1 1
No Yes Burkholderia phytofirmans PsJN 1 1
No Yes Burkholderia phymatum STM815 1 1
No Yes Burkholderia xenovorans LB400 1 1
No Yes Ralstonia eutropha JMP134 1 1
No Yes Cupriavidus taiwanensis LMG 19424 1 1
No Yes Cupriavidus metallidurans CH34 1 1
No Yes Cupriavidus necator N-1 2 2
No Yes Ralstonia eutropha H16 1 1
No Yes Ralstonia pickettii 12D 1 1
No Yes Ralstonia solanacearum CFBP2957 1 1
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 1 1
No Yes Burkholderia sp. RPE64 1 1
No Yes Burkholderia sp. CCGE1002 1 1
No Yes Burkholderia thailandensis E264 1 1
No Yes Burkholderia pseudomallei 1106a 1 1
No Yes Burkholderia mallei SAVP1 1 1
No Yes Burkholderia ambifaria AMMD 1 1
No Yes Burkholderia cenocepacia HI2424 1 1
No Yes Burkholderia multivorans ATCC 17616 1 1
No Yes Burkholderia vietnamiensis G4 1 1
No Yes Burkholderia gladioli BSR3 1 1
No Yes Burkholderia glumae BGR1 1 1
No Yes Verminephrobacter eiseniae EF01-2 1 1
No Yes Alicycliphilus denitrificans K601 1 1
No Yes Ramlibacter tataouinensis TTB310 1 1
No Yes Delftia sp. Cs1-4 1 1
No Yes Delftia acidovorans SPH-1 1 1
No Yes Polaromonas sp. JS666 1 1
No Yes Polaromonas naphthalenivorans CJ2 1 1
No Yes Variovorax paradoxus S110 1 1
No Yes Rhodoferax ferrireducens T118 1 1
No Yes Acidovorax ebreus TPSY 1 1
No Yes Acidovorax sp. KKS102 1 1
No Yes Acidovorax sp. JS42 1 1
No Yes Acidovorax citrulli AAC00-1 1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860 1 1
No Yes Comamonas testosteroni CNB-2 1 1
No Yes Herminiimonas arsenicoxydans 1 1
No Yes Collimonas fungivorans Ter331 1 1
No Yes Janthinobacterium sp. Marseille 1 1
No Yes Herbaspirillum seropedicae SmR1 1 1
No Yes Pusillimonas sp. T7-7 1 1
No Yes Advenella kashmirensis WT001 1 1
No Yes Taylorella asinigenitalis MCE3 1 1
No Yes Taylorella equigenitalis MCE9 1 1
No Yes Bordetella petrii DSM 12804 1 1
No Yes Bordetella avium 197N 1 1
No Yes Bordetella pertussis Tohama I 1 1
No Yes Bordetella parapertussis 12822 1 1
No Yes Bordetella bronchiseptica RB50 1 1
No Yes Achromobacter xylosoxidans A8 1 1
No Yes Achromobacter xylosoxidans 1 1
No Yes Thiobacillus denitrificans ATCC 25259 1 1
No Yes Nitrosospira multiformis ATCC 25196 1 1
No Yes Nitrosomonas sp. Is79A3 1 1
No Yes Nitrosomonas eutropha C91 1 1
No Yes Nitrosomonas europaea ATCC 19718 2 2
No Yes Sideroxydans lithotrophicus ES-1 1 1
No Yes Gallionella capsiferriformans ES-2 1 1
No Yes Methylotenera versatilis 301 1 1
No Yes Methylotenera mobilis JLW8 1 1
No Yes Methylovorus sp. MP688 1 1
No Yes Methylovorus glucosetrophus SIP3-4 1 1
No Yes Methylobacillus flagellatus KT 2 2
No Yes Caulobacter sp. K31 1 1
No Yes Caulobacter crescentus NA1000 1 1
No Yes Caulobacter segnis ATCC 21756 1 1
No Yes Phenylobacterium zucineum HLK1 1 1
No Yes Sphingobium sp. SYK-6 1 1
No Yes Sphingobium japonicum UT26S 1 1
No Yes Sphingobium chlorophenolicum L-1 1 1
No Yes Sphingomonas sp. MM-1 1 1
No Yes Sphingomonas wittichii RW1 1 1
No Yes Dinoroseobacter shibae DFL 12 1 1
No Yes Phaeobacter gallaeciensis 2.10 1 1
No Yes Pseudovibrio sp. FO-BEG1 1 1
No Yes Jannaschia sp. CCS1 1 1
No Yes Ruegeria sp. TM1040 1 1
No Yes Ruegeria pomeroyi DSS-3 1 1
No Yes Roseobacter litoralis Och 149 1 1
No Yes Roseobacter denitrificans OCh 114 1 1
No Yes Rhodobacter sphaeroides ATCC 17029 1 1
No Yes Rhodobacter capsulatus SB 1003 1 1
No Yes Paracoccus denitrificans PD1222 1 1
No Yes Rhodospirillum photometricum DSM 122 1 1
No Yes Tistrella mobilis KA081020-065 1 1
No Yes Magnetospirillum magneticum AMB-1 1 1
No Yes Rhodospirillum rubrum F11 1 1
No Yes Azospirillum lipoferum 4B 1 1
No Yes Azospirillum sp. B510 1 1
No Yes Azospirillum brasilense Sp245 1 1
No Yes Polymorphum gilvum SL003B-26A1 1 1
No Yes Micavibrio aeruginosavorus ARL-13 1 1
No Yes Candidatus Puniceispirillum marinum IMCC1322 1 1
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel 1 1
No Yes Wolbachia sp. wRi 1 1
No Yes Ehrlichia chaffeensis str. Arkansas 1 1
No Yes Ehrlichia canis str. Jake 1 1
No Yes Ehrlichia ruminantium str. Gardel 1 1
No Yes Anaplasma marginale str. Florida 1 1
No Yes Anaplasma centrale str. Israel 1 1
No Yes Starkeya novella DSM 506 1 1
No Yes Xanthobacter autotrophicus Py2 1 1
No Yes Azorhizobium caulinodans ORS 571 1 1
No Yes Methylobacterium chloromethanicum CM4 1 1
No Yes Methylobacterium extorquens AM1 1 1
No Yes Methylobacterium sp. 4-46 1 1
No Yes Methylobacterium populi BJ001 1 1
No Yes Methylobacterium nodulans ORS 2060 1 1
No Yes Methylobacterium radiotolerans JCM 2831 1 1
No Yes Parvibaculum lavamentivorans DS-1 1 1
No Yes Ochrobactrum anthropi ATCC 49188 1 1
No Yes Brucella microti CCM 4915 1 1
No Yes Brucella pinnipedialis B2/94 1 1
No Yes Brucella canis ATCC 23365 1 1
No Yes Brucella suis ATCC 23445 1 1
No Yes Brucella melitensis ATCC 23457 1 1
No Yes Brucella ovis ATCC 25840 1 1
No Yes Brucella abortus S19 1 1
No Yes Sinorhizobium fredii NGR234 1 1
No Yes Sinorhizobium medicae WSM419 1 1
No Yes Sinorhizobium meliloti AK83 1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74 1 1
No Yes Rhizobium etli CIAT 652 1 1
No Yes Rhizobium leguminosarum bv. viciae 3841 1 1
No Yes Agrobacterium tumefaciens str. C58 1 1
No Yes Agrobacterium radiobacter K84 1 1
No Yes Agrobacterium sp. H13-3 1 1
No Yes Agrobacterium vitis S4 1 1
No Yes Mesorhizobium sp. BNC1 1 1
No Yes Mesorhizobium opportunistum WSM2075 1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271 1 1
No Yes Mesorhizobium loti MAFF303099 1 1
No Yes Methylocella silvestris BL2 1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039 1 1
No Yes Pelagibacterium halotolerans B2 1 1
No Yes Rhodomicrobium vannielii ATCC 17100 1 1
No Yes Hyphomicrobium sp. MC1 1 1
No Yes Hyphomicrobium denitrificans ATCC 51888 1 1
No Yes Oligotropha carboxidovorans OM4 1 1
No Yes Rhodopseudomonas palustris BisA53 1 1
No Yes Nitrobacter winogradskyi Nb-255 1 1
No Yes Nitrobacter hamburgensis X14 1 1
No Yes Bradyrhizobium japonicum USDA 110 1 1
No Yes Bradyrhizobium sp. ORS 278 1 1
No Yes Methylocystis sp. SC2 1 1
No Yes Bartonella tribocorum CIP 105476 1 1
No Yes Bartonella clarridgeiae 73 1 1
No Yes Bartonella henselae str. Houston-1 1 1
No Yes Bartonella grahamii as4aup 1 1
No Yes Bartonella quintana str. Toulouse 1 1
No Yes Bartonella bacilliformis KC583 1 1
No Yes Kangiella koreensis DSM 16069 1 1
No Yes Rhodanobacter denitrificans 1 1
No Yes Frateuria aurantia DSM 6220 1 1
No Yes Pseudoxanthomonas spadix BD-a59 1 1
No Yes Pseudoxanthomonas suwonensis 11-1 1 1
No Yes Stenotrophomonas maltophilia K279a 1 1
No Yes Xylella fastidiosa M23 1 1
No Yes Xanthomonas axonopodis pv. citri str. 306 1 1
No Yes Xanthomonas albilineans GPE PC73 1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A 1 1
No Yes Xanthomonas campestris pv. campestris str. B100 1 1
No Yes Halothiobacillus neapolitanus c2 1 1
No Yes Spiribacter sp. UAH-SP71 1 1
No Yes Alkalilimnicola ehrlichii MLHE-1 1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7 1 1
No Yes Thioalkalivibrio sp. K90mix 1 1
No Yes Halorhodospira halophila SL1 1 1
No Yes Allochromatium vinosum DSM 180 1 1
No Yes Thiocystis violascens DSM 198 1 1
No Yes Nitrosococcus watsonii C-113 1 1
No Yes Nitrosococcus halophilus Nc4 1 1
No Yes Nitrosococcus oceani ATCC 19707 1 1
No Yes Coxiella burnetii Dugway 5J108-111 1 1
No Yes Legionella longbeachae NSW150 1 1
No Yes Legionella pneumophila str. Corby 1 1
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 1 1
No Yes Candidatus Vesicomyosocius okutanii HA 1 1
No Yes Methylophaga sp. JAM1 1 1
No Yes Thiomicrospira crunogena XCL-2 1 1
No Yes Thioalkalimicrobium cyclicum ALM1 1 1
No Yes Francisella noatunensis subsp. orientalis str. Toba 04 1 1
No Yes Francisella sp. TX077308 1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017 1 1
No Yes Francisella tularensis subsp. tularensis WY96-3418 1 1
No Yes Francisella cf. novicida 3523 1 1
No Yes Francisella novicida U112 1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8 1 1
No Yes Pyrolobus fumarii 1A 1 1
No Yes Hyperthermus butylicus DSM 5456 2 2
No Yes Ignisphaera aggregans DSM 17230 1 1
No Yes Thermofilum sp. 1910b 1 1
No Yes Thermofilum pendens Hrk 5 1 1
No Yes Methanohalobium evestigatum Z-7303 1 1
No Yes Methanosarcina acetivorans C2A 2 2
No Yes Methanosarcina mazei Go1 2 2
No Yes Methanosarcina barkeri str. Fusaro 1 1
No Yes Methanohalophilus mahii DSM 5219 1 1
No Yes Methanoregula boonei 6A8 1 1
No Yes Methanopyrus kandleri AV19 1 1
No Yes Ferroglobus placidus DSM 10642 1 1
No Yes Archaeoglobus profundus DSM 5631 1 1
No Yes Archaeoglobus veneficus SNP6 1 1
No Yes Archaeoglobus fulgidus DSM 4304 1 1
No Yes Thermococcus sp. 4557 1 1
No Yes Thermococcus onnurineus NA1 1 1
No Yes Thermococcus kodakarensis KOD1 1 1
No Yes Thermococcus gammatolerans EJ3 1 1
No Yes Thermococcus sibiricus MM 739 1 1
No Yes Thermococcus barophilus MP 1 1
No Yes Pyrococcus yayanosii CH1 1 1
No Yes Pyrococcus horikoshii OT3 1 1
No Yes Pyrococcus abyssi GE5 1 1
No Yes Pyrococcus furiosus COM1 1 1
No Yes Methanothermus fervidus DSM 2088 1 1
No Yes Methanothermobacter marburgensis str. Marburg 1 1
No Yes Methanothermobacter thermautotrophicus str. Delta H 1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 4 4
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 3 3
No Yes Cryptococcus neoformans var. grubii H99 1 1
No Yes Cryptococcus neoformans B-3501A 1 1
No Yes Cryptococcus neoformans JEC21 1 1
No Yes Paracoccidioides brasiliensis Pb01 1 1
No Yes Coccidioides posadasii str. Silveira 1 1
No Yes Coccidioides immitis RMSCC 3703 1 1
No Yes Coccidioides immitis RMSCC 2394 1 1
No Yes Coccidioides immitis H538.4 1 1
No Yes Ajellomyces dermatitidis ER-3 1 1
No Yes Histoplasma capsulatum H143 1 1
No Yes Histoplasma capsulatum H88 1 1
No Yes Histoplasma capsulatum G186AR 1 1
No Yes Aspergillus fumigatus A1163 1 1
No Yes Candida albicans WO-1 1 1
No Yes Batrachochytrium dendrobatidis JEL423 1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Trypanosoma brucei Lister 427 v4.1 1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270 1 1
No Yes Neisseria meningitidis WUE 2594 1 1
No Yes Neisseria meningitidis G2136 1 1
No Yes Neisseria meningitidis M04-240196 1 1
No Yes Neisseria meningitidis M01-240149 1 1
No Yes Neisseria meningitidis NZ-05/33 1 1
No Yes Neisseria meningitidis M01-240355 1 1
No Yes Neisseria meningitidis 8013 1 1
No Yes Neisseria meningitidis 053442 1 1
No Yes Neisseria meningitidis Z2491 1 1
No Yes Neisseria meningitidis H44/76 1 1
No Yes Neisseria meningitidis alpha710 1 1
No Yes Neisseria meningitidis MC58 1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107 1 1
No Yes Neisseria gonorrhoeae FA 1090 1 1
No Yes Candidatus Kinetoplastibacterium oncopeltii TCC290E 1 1
No Yes Candidatus Kinetoplastibacterium galatii TCC219 1 1
No Yes Candidatus Kinetoplastibacterium desouzaii TCC079E 1 1
No Yes Kinetoplastibacterium blastocrithidii Candidatus (ex Strigomonas culicis) 1 1
No Yes Kinetoplastibacterium blastocrithidii Candidatus TCC012E 1 1
No Yes Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) 1 1
No Yes Candidatus Kinetoplastibacterium crithidii TCC036E 1 1
No Yes Burkholderia phenoliruptrix BR3459a 1 1
No Yes Pandoraea pnomenusa 3kgm 1 1
No Yes Ralstonia pickettii 12J 1 1
No Yes Ralstonia solanacearum FQY_4 1 1
No Yes Ralstonia solanacearum Po82 1 1
No Yes Ralstonia solanacearum PSI07 1 1
No Yes Ralstonia solanacearum CMR15 1 1
No Yes Ralstonia solanacearum GMI1000 1 1
No Yes Polynucleobacter necessarius subsp. necessarius STIR1 1 1
No Yes Burkholderia sp. YI23 1 1
No Yes Burkholderia sp. CCGE1003 1 1
No Yes Burkholderia sp. CCGE1001 1 1
No Yes Burkholderia sp. KJ006 1 1
No Yes Burkholderia thailandensis MSMB121 1 1
No Yes Burkholderia pseudomallei MSHR305 1 1
No Yes Burkholderia pseudomallei NCTC 13179 1 1
No Yes Burkholderia pseudomallei BPC006 1 1
No Yes Burkholderia pseudomallei 1026b 1 1
No Yes Burkholderia pseudomallei MSHR346 1 1
No Yes Burkholderia pseudomallei 668 1 1
No Yes Burkholderia pseudomallei 1710b 1 1
No Yes Burkholderia pseudomallei K96243 1 1
No Yes Burkholderia mallei NCTC 10229 1 1
No Yes Burkholderia mallei NCTC 10247 1 1
No Yes Burkholderia lata 1 1
No Yes Burkholderia ambifaria MC40-6 1 1
No Yes Burkholderia cenocepacia MC0-3 1 1
No Yes Burkholderia cenocepacia AU 1054 1 1
No Yes Burkholderia cenocepacia J2315 1 1
No Yes Burkholderia multivorans ATCC 17616 1 1
No Yes Burkholderia cepacia GG4 1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 1 1
No Yes Alicycliphilus denitrificans BC 1 1
No Yes Variovorax paradoxus B4 1 1
No Yes Variovorax paradoxus EPS 1 1
No Yes Taylorella asinigenitalis 14/45 1 1
No Yes Taylorella equigenitalis 14/56 1 1
No Yes Taylorella equigenitalis ATCC 35865 1 1
No Yes Bordetella pertussis CS 1 1
No Yes Bordetella parapertussis 18323 1 1
No Yes Bordetella parapertussis Bpp5 1 1
No Yes Bordetella bronchiseptica MO149 1 1
No Yes Bordetella bronchiseptica 253 1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 1 1
No Yes Nitrosomonas sp. AL212 1 1
No Yes Sulfuricella denitrificans skB26 1 1
No Yes Caulobacter crescentus CB15 1 1
No Yes Phaeobacter gallaeciensis DSM 17395 1 1
No Yes Phaeobacter gallaeciensis DSM 26640 1 1
No Yes Leisingera methylohalidivorans DSM 14336 1 1
No Yes Octadecabacter antarcticus 307 1 1
No Yes Octadecabacter arcticus 238 1 1
No Yes Rhodobacter sphaeroides KD131 1 1
No Yes Rhodobacter sphaeroides ATCC 17025 1 1
No Yes Rhodobacter sphaeroides 2.4.1 1 1
No Yes Paracoccus aminophilus JCM 7686 1 1
No Yes Candidatus Endolissoclinum faulkneri L2 1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2 1 1
No Yes Rhodospirillum rubrum ATCC 11170 1 1
No Yes Micavibrio aeruginosavorus EPB 1 1
No Yes Wolbachia endosymbiont of Drosophila melanogaster 1 1
No Yes Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon 1 1
No Yes Wolbachia endosymbiont strain TRS of Brugia malayi 1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wHa 1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wNo 1 1
No Yes Ehrlichia muris AS145 1 1
No Yes Ehrlichia ruminantium str. Welgevonden 1 1
No Yes Ehrlichia ruminantium str. Welgevonden 1 1
No Yes Anaplasma marginale str. Gypsy Plains 1 1
No Yes Anaplasma marginale str. St. Maries 1 1
No Yes Methylobacterium extorquens DM4 1 1
No Yes Methylobacterium extorquens PA1 1 1
No Yes Brucella ceti TE10759-12 1 1
No Yes Brucella ceti TE28753-12 1 1
No Yes Brucella canis HSK A52141 1 1
No Yes Brucella suis VBI22 1 1
No Yes Brucella suis 1330 1 1
No Yes Brucella suis 1330 1 1
No Yes Brucella melitensis NI 1 1
No Yes Brucella melitensis M5-90 1 1
No Yes Brucella melitensis M28 1 1
No Yes Brucella melitensis bv. 1 str. 16M 1 1
No Yes Brucella abortus A13334 1 1
No Yes Brucella melitensis biovar Abortus 2308 1 1
No Yes Brucella abortus bv. 1 str. 9-941 1 1
No Yes Sinorhizobium fredii USDA 257 1 1
No Yes Sinorhizobium fredii HH103 1 1
No Yes Sinorhizobium meliloti 2011 1 1
No Yes Sinorhizobium meliloti GR4 1 1
No Yes Sinorhizobium meliloti Rm41 1 1
No Yes Sinorhizobium meliloti SM11 1 1
No Yes Sinorhizobium meliloti BL225C 1 1
No Yes Sinorhizobium meliloti 1021 1 1
No Yes Rhizobium etli CFN 42 1 1
No Yes Rhizobium etli bv. mimosae str. Mim1 1 1
No Yes Rhizobium tropici CIAT 899 1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304 1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325 1 1
No Yes Mesorhizobium australicum WSM2073 1 1
No Yes Hyphomicrobium nitrativorans NL23 1 1
No Yes Hyphomicrobium denitrificans 1NES1 1 1
No Yes Oligotropha carboxidovorans OM5 1 1
No Yes Oligotropha carboxidovorans OM5 1 1
No Yes Rhodopseudomonas palustris DX-1 1 1
No Yes Rhodopseudomonas palustris TIE-1 1 1
No Yes Rhodopseudomonas palustris HaA2 1 1
No Yes Rhodopseudomonas palustris BisB5 1 1
No Yes Rhodopseudomonas palustris BisB18 1 1
No Yes Rhodopseudomonas palustris CGA009 1 1
No Yes Bradyrhizobium sp. S23321 1 1
No Yes Bradyrhizobium sp. BTAi1 1 1
No Yes Bradyrhizobium oligotrophicum S58 1 1
No Yes Bradyrhizobium japonicum USDA 6 1 1
No Yes Bartonella australis Aust/NH1 1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie 1 1
No Yes Bartonella quintana RM-11 1 1
No Yes Stenotrophomonas maltophilia D457 1 1
No Yes Stenotrophomonas maltophilia JV3 1 1
No Yes Stenotrophomonas maltophilia R551-3 1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514 1 1
No Yes Xylella fastidiosa M12 1 1
No Yes Xylella fastidiosa Temecula1 1 1
No Yes Xylella fastidiosa 9a5c 1 1
No Yes Xanthomonas citri subsp. citri Aw12879 1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10 1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1 1 1
No Yes Xanthomonas axonopodis Xac29-1 1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256 1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018 1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331 1 1
No Yes Xanthomonas campestris pv. raphani 756C 1 1
No Yes Xanthomonas campestris pv. campestris str. 8004 1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913 1 1
No Yes Spiribacter salinus M19-40 1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787 1 1
No Yes Thioflavicoccus mobilis 8321 1 1
No Yes Coxiella burnetii CbuK_Q154 1 1
No Yes Coxiella burnetii CbuG_Q212 1 1
No Yes Coxiella burnetii RSA 331 1 1
No Yes Coxiella burnetii RSA 493 1 1
No Yes Legionella pneumophila str. Paris 1 1
No Yes Legionella pneumophila str. Lens 1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509 1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay 1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1 1 1
No Yes Legionella pneumophila subsp. pneumophila 1 1
No Yes Legionella pneumophila subsp. pneumophila 1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290 1 1
No Yes Legionella pneumophila 2300/99 Alcoy 1 1
No Yes Methylophaga sp. JAM7 1 1
No Yes Francisella noatunensis subsp. orientalis LADL--07-285A 1 1
No Yes Francisella tularensis subsp. mediasiatica FSC147 1 1
No Yes Francisella tularensis subsp. holarctica F92 1 1
No Yes Francisella tularensis subsp. holarctica FTNF002-00 1 1
No Yes Francisella tularensis subsp. holarctica OSU18 1 1
No Yes Francisella tularensis subsp. holarctica LVS 1 1
No Yes Francisella tularensis subsp. holarctica FSC200 1 1
No Yes Francisella tularensis subsp. tularensis TIGB03 1 1
No Yes Francisella tularensis subsp. tularensis TI0902 1 1
No Yes Francisella tularensis subsp. tularensis NE061598 1 1
No Yes Francisella tularensis subsp. tularensis FSC198 1 1
No Yes Francisella tularensis subsp. tularensis SCHU S4 1 1
No Yes Francisella cf. novicida Fx1 1 1
No Yes Methanosarcina mazei Tuc01 2 2
No Yes Methanoregula formicica Methanoregula formicicum SMSP 1 1
No Yes Archaeoglobus sulfaticallidus PM70-1 1 1
No Yes Thermococcus sp. AM4 1 1
No Yes Thermococcus sp. CL1 1 1
No Yes Thermococcus litoralis DSM 5473 1 1
No Yes Pyrococcus sp. NA2 1 1
No Yes Pyrococcus furiosus DSM 3638 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 13 13
No Yes Homo sapiens (NCBI version) Human 5 5
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Heliconius numata (Incomplete) 2 2
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly) 2 2
No Yes Malus x domestica (Duplicate) Apple 7 7
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft) 1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Wolbachia endosymbiont of Brugia malayi v1.0 (Broad Institute) 1 1
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 69_3.1 Western gorilla 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 69_3 Small-eared galago 2 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 2 2
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 2 2
No Yes Cavia porcellus 69_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Ochotona princeps 69 American pika 2 2
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 2 2
No Yes Bos taurus 69_3.1 Cattle 2 2
No Yes Vicugna pacos 69_1 Alpaca 2 2
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2 2
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 3 2
No Yes Equus caballus 69_2 Horse 2 2
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 69_1 Large flying fox 2 2
No Yes Sorex araneus 69_1 European shrew 2 2
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 69_2.0 Green anole 2 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 2 2
No Yes Gadus morhua 69_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 69_4 Torafugu 2 2
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 2 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes 2_050719S (meta-genome) 1 1
No Yes 3_Below_base_of_euphotic (meta-genome) 2 2
No Yes 4_Deep_abyss (meta-genome) 1 1
No Yes 6_Upper_euphotic (meta-genome) 1 1
No Yes 7_Oxygen_minimum_layer (meta-genome) 1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome) 2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome) 1 1
No Yes Combined (meta-genome) 6 6
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome) 3 3
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 2 2
No Yes Dump bottom (Dump bottom) (meta-genome) 31 31
No Yes Dump top (Dump top) (meta-genome) 24 24
No Yes Endophytic microbiome from Rice (meta-genome) 3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 4 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 2 2
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 3 3
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome) 1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 28 28
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 7 7
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 7 7
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 15 15
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 6 6
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 1 1
No Yes NCBI 2017_08 genome 11740 11734
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 5 5
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome) 1 1
No Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome) 1 1
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome) 1 1
No Yes Protozoadb 2010_08 (Protozoadb) 7 7
No Yes simHC - Simulated High Complexity Metagenome (meta-genome) 12 12
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome) 5 5
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome) 6 6
No Yes Sludge/Australian, Phrap Assembly (meta-genome) 2 2
No Yes Sludge/US, Jazz Assembly (meta-genome) 4 4
No Yes Sludge/US, Phrap Assembly (meta-genome) 6 6
No Yes Soil microbial communities from Minnesota Farm (meta-genome) 6 6
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 17 17
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 13 13
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 8 8
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 17 17
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 2 2
No Yes STRING v9.0.5 (STRING) 350 349
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 7 7
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 3 3
No Yes Uniprot 2018_03 genome 5894 5887
No Yes Uranium Contaminated Groundwater FW106 (meta-genome) 2 2
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 6 6
No Yes Global Ocean Sampling Expedition (GOS) 198 198
No Yes NCBI plasmid sequences (Plasmids) 2 2
No Yes PDB chains (SCOP 1.75 ) (PDB) 5 5
No Yes Protein Data Bank (all PDB sequenc) 12 12
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 33 33
No Yes TargetDB (Targets) 35 35