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PX domain superfamily domain assignments
in
Brachypodium distachyon

Assignment details

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Brachypodium distachyon has 11 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G30410.1   1.96e-22   57-185   PX domain  
EG:BRADI1G30410.2   1.3e-22   57-185   PX domain  
EG:BRADI2G15390.1   5.23e-23   692-803   PX domain  
EG:BRADI2G22470.1   1.28e-20   86-212   PX domain  
EG:BRADI2G22470.2   1.15e-20   86-212   PX domain  
EG:BRADI2G40770.1   6.41e-18   208-317   PX domain  
EG:BRADI2G40770.2   4.32e-18   207-317   PX domain  
EG:BRADI2G53790.1   7.46e-21   83-205   PX domain  
EG:BRADI2G53790.2   7.46e-21   83-205   PX domain  
EG:BRADI2G55760.1   1.96e-35   23-140   PX domain  
EG:BRADI4G25047.1   1.18e-21   552-663   PX domain  
 
Weak hits:
EG:BRADI1G38770.2   0.0438   228-283   PX domain  
EG:BRADI2G27947.1   0.0543   58-99,170-204   PX domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   93615 93615
No Yes Homo sapiens 76_38 Human 186 185
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 49 49
No Yes Gorilla gorilla 76_3.1 Western gorilla 62 62
No Yes Pongo abelii 76_2 Sumatran orangutan 52 52
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 53 53
No Yes Papio anubis 76 Olive baboon 58 58
No Yes Macaca mulatta 76_1 Rhesus monkey 100 100
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 120 120
No Yes Otolemur garnettii 76_3 Small-eared galago 52 52
No Yes Microcebus murinus 76_1 Gray mouse lemur 48 48
No Yes Rattus norvegicus 76_5.0 Norway rat 55 55
No Yes Mus musculus 76_38 House mouse 112 112
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 40 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 41 41
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 51 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 50 50
No Yes Oryctolagus cuniculus 76_2 Rabbit 51 51
No Yes Ochotona princeps 76 American pika 40 40
No Yes Tupaia belangeri 76 Northern tree shrew 35 35
No Yes Sus scrofa 76_10.2 Pig 55 55
No Yes Bos taurus 76_3.1 Cattle 50 50
No Yes Ovis aries 76_3.1 Sheep 55 55
No Yes Vicugna pacos 76_1 Alpaca 33 33
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 45 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 50 50
No Yes Ailuropoda melanoleuca 76_1 Giant panda 55 55
No Yes Canis familiaris 76_3.1 Dog 62 62
No Yes Felis catus 76_6.2 Domestic cat 50 50
No Yes Equus caballus 76_2 Horse 55 55
No Yes Myotis lucifugus 76_2.0 Little brown bat 50 50
No Yes Pteropus vampyrus 76_1 Large flying fox 45 45
No Yes Sorex araneus 76_1 European shrew 28 28
No Yes Erinaceus europaeus 76 Western European hedgehog 38 38
No Yes Procavia capensis 76_1 Cape rock hyrax 42 42
No Yes Loxodonta africana 76_3 African savanna elephant 63 63
No Yes Echinops telfairi 76 Small Madagascar hedgehog 38 38
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 54 54
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 28 28
No Yes Macropus eugenii 76_1.0 Tammar wallaby 41 41
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 61 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 51 51
No Yes Ornithorhynchus anatinus 76_5 Platypus 41 41
No Yes Saccoglossus kowalevskii v3.0   40 39
No Yes Petromyzon marinus 76_7.0 Sea lamprey 23 23
No Yes Meleagris gallopavo 76_2 Turkey 44 44
No Yes Gallus gallus 76_4 Chicken 49 49
No Yes Anas platyrhynchos 76_1.0 Mallard 45 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 49 49
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 43 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 50 50
No Yes Anolis carolinensis 76_2.0 Green anole 48 48
No Yes Xenopus laevis African clawed frog 77 77
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 62 62
No Yes Latimeria chalumnae 76_1 Coelacanth 57 57
No Yes Lepisosteus oculatus 76 Spotted gar 65 65
No Yes Gadus morhua 76_1 Atlantic cod 59 59
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 69 69
No Yes Takifugu rubripes 76_4 Torafugu 136 136
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 79 79
No Yes Oryzias latipes 76_1 Japanese medaka 65 65
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 55 55
No Yes Poecilia formosa 76 Amazon molly 56 56
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 75 75
No Yes Astyanax mexicanus 76 Mexican tetra 64 64
No Yes Danio rerio 76_9 Zebrafish 101 101
No Yes Oikopleura dioica   17 17
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 36 36
No Yes Ciona intestinalis 76 Vase tunicate 21 21
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 31 31
No Yes Adineta vaga   70 70
No Yes Octopus bimaculoides 280   46 46
No Yes Crassostrea gigas 22 Pacific oyster 28 28
No Yes Lottia gigantea Owl limpet 29 29
No Yes Helobdella robusta   22 22
No Yes Capitella sp. I   33 33
No Yes Danaus plexippus OGS1.0 Monarch butterfly 23 22
No Yes Heliconius melpomene Postman butterfly 21 21
No Yes Bombyx mori Domestic silkworm 16 16
No Yes Nasonia vitripennis Jewel wasp 19 19
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 29 29
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 23 23
No Yes Linepithema humile v1.1 Argentine ant 22 22
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 21 21
No Yes Solenopsis invicta v.2.2.3 Red fire ant 19 19
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 23 23
No Yes Atta cephalotes v1.1   21 21
No Yes Camponotus floridanus v3.3 Florida carpenter ant 23 23
No Yes Lucilia cuprina Australian sheep blowfly 13 13
No Yes Drosophila grimshawi 1.3   17 17
No Yes Drosophila willistoni 1.3   16 16
No Yes Drosophila pseudoobscura 2.13   16 16
No Yes Drosophila persimilis 1.3   16 16
No Yes Drosophila suzukii   19 18
No Yes Drosophila yakuba 1.3   17 17
No Yes Drosophila simulans 1.3   15 15
No Yes Drosophila sechellia 1.3   14 14
No Yes Drosophila melanogaster 76_5 Fruit fly 31 31
No Yes Drosophila erecta 1.3   16 16
No Yes Drosophila ananassae 1.3   16 16
No Yes Drosophila virilis 1.2   16 16
No Yes Drosophila mojavensis 1.3   16 16
No Yes Megaselia scalaris 22   5 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 22 22
No Yes Culex pipiens quinquefasciatus Southern house mosquito 18 18
No Yes Anopheles darlingi 22 American malaria mosquito 16 16
No Yes Anopheles gambiae 49_3j African malaria mosquito 19 18
No Yes Tribolium castaneum 3.0 Red flour beetle 22 22
No Yes Pediculus humanus corporis (Early assembly) Human body louse 21 21
No Yes Acyrthosiphon pisum Pea aphid 15 15
No Yes Rhodnius prolixus 22   17 17
No Yes Daphnia pulex Common water flea 18 18
No Yes Strigamia maritima 22   25 25
No Yes Sarcoptes scabiei   13 13
No Yes Tetranychus urticae Two-spotted spider mite 16 16
No Yes Ixodes scapularis (Preliminary) Black-legged tick 24 24
No Yes Pristionchus pacificus   10 10
No Yes Meloidogyne incognita Southern root-knot nematode 15 14
No Yes Meloidogyne hapla   8 8
No Yes Onchocerca volvulus 22   13 13
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 18 18
No Yes Caenorhabditis japonica   13 12
No Yes Caenorhabditis brenneri   26 24
No Yes Caenorhabditis remanei   16 15
No Yes Caenorhabditis elegans 76_235 Roundworm 28 27
No Yes Caenorhabditis briggsae 2   16 15
No Yes Trichinella spiralis 22   14 14
No Yes Hymenolepis microstoma   10 10
No Yes Echinococcus multilocularis   11 11
No Yes Echinococcus granulosus   11 11
No Yes Taenia solium Pork tapeworm 9 9
No Yes Schistosoma mansoni   7 7
No Yes Mnemiopsis leidyi Sea walnut 19 19
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   31 31
No Yes Nematostella vectensis 1.0 Starlet sea anemone 38 38
No Yes Hydra vulgaris   23 23
No Yes Amphimedon queenslandica   37 37
No Yes Trichoplax adhaerens   21 21
No Yes Proterospongia sp. ATCC 50818   30 30
No Yes Monosiga brevicollis   24 24
No Yes Sphaeroforma arctica JP610   29 29
No Yes Capsaspora owczarzaki ATCC 30864   43 42
No Yes Conidiobolus coronatus NRRL28638 v1.0   15 15
No Yes Mortierella verticillata NRRL 6337   24 23
No Yes Phycomyces blakesleeanus   29 29
No Yes Rhizopus oryzae RA 99-880   25 25
No Yes Mucor circinelloides   27 27
No Yes Rhizomucor miehei CAU432   28 28
No Yes Malassezia globosa CBS 7966   18 18
No Yes Sporisorium reilianum 22   14 14
No Yes Ustilago maydis   14 14
No Yes Mixia osmundae IAM 14324 v1.0   14 14
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   15 15
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   18 18
No Yes Melampsora laricis-populina   15 15
No Yes Rhodotorula graminis WP1 v1.0   14 14
No Yes Sporobolomyces roseus IAM 13481   12 12
No Yes Microbotryum violaceum 22   16 16
No Yes Wallemia sebi v1.0   11 11
No Yes Sphaerobolus stellatus v1.0   15 15
No Yes Piloderma croceum F 1598 v1.0   18 18
No Yes Serpula lacrymans var. lacrymans S7.9   13 13
No Yes Coniophora puteana   13 13
No Yes Hydnomerulius pinastri v2.0   15 15
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   14 14
No Yes Pisolithus microcarpus 441 v1.0   13 13
No Yes Pisolithus tinctorius Marx 270 v1.0   14 14
No Yes Scleroderma citrinum Foug A v1.0   15 15
No Yes Coprinopsis cinerea okayama7 130 v3   15 15
No Yes Pleurotus ostreatus Oyster mushroom 12 12
No Yes Amanita thiersii Skay4041 v1.0   14 14
No Yes Amanita muscaria Koide v1.0 Fly agaric 13 13
No Yes Galerina marginata v1.0   17 17
No Yes Hebeloma cylindrosporum h7 v2.0   17 17
No Yes Laccaria bicolor S238N-H82   17 17
No Yes Agaricus bisporus var. bisporus   16 16
No Yes Schizophyllum commune   13 13
No Yes Stereum hirsutum FP-91666 SS1 v1.0   15 15
No Yes Heterobasidion annosum   12 12
No Yes Gloeophyllum trabeumv1.0   14 14
No Yes Punctularia strigosozonata v1.0   12 12
No Yes Sebacina vermifera MAFF 305830 v1.0   15 15
No Yes Fomitiporia mediterranea v1.0   13 13
No Yes Tulasnella calospora AL13/4D v1.0   14 14
No Yes Postia placenta   19 19
No Yes Wolfiporia cocos MD-104 SS10 v1.0   14 14
No Yes Fomitopsis pinicolav1.0   17 17
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   17 17
No Yes Phanerochaete chrysosporium RP-78 2.1   14 14
No Yes Dichomitus squalens   14 14
No Yes Trametes versicolor v1.0   15 15
No Yes Tremella mesenterica Witches' butter 12 12
No Yes Daldinia eschscholzii EC12 v1.0   13 13
No Yes Apiospora montagnei NRRL 25634 v1.0   13 13
No Yes Magnaporthe poae ATCC 64411 22   9 9
No Yes Magnaporthe grisea 70-15   13 13
No Yes Podospora anserina   13 13
No Yes Sporotrichum thermophile ATCC 42464   12 12
No Yes Thielavia terrestris NRRL 8126   13 13
No Yes Chaetomium globosum CBS 148.51   12 12
No Yes Neurospora tetrasperma   13 13
No Yes Neurospora discreta FGSC 8579   13 13
No Yes Neurospora crassa OR74A   13 13
No Yes Cryphonectria parasitica Chestnut blight fungus 13 13
No Yes Verticillium albo-atrum VaMs.102   12 12
No Yes Verticillium dahliae VdLs.17   12 12
No Yes Acremonium alcalophilumv 1.0   14 14
No Yes Glomerella graminicola 22   13 13
No Yes Fusarium graminearum   12 12
No Yes Nectria haematococca mpVI   15 15
No Yes Fusarium oxysporum f. sp. lycopersici 4286   13 13
No Yes Fusarium verticillioides 7600   14 14
No Yes Trichoderma asperellum CBS 433.97 v1.0   13 13
No Yes Trichoderma atroviride   13 13
No Yes Trichoderma citrinoviride v1.0   13 13
No Yes Trichoderma reesei 1.2   13 13
No Yes Trichoderma virens Gv29-8   13 13
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   13 13
No Yes Trichoderma harzianum CBS 226.95 v1.0   13 13
No Yes Amorphotheca resinae v1.0 Creosote fungus 13 13
No Yes Botrytis cinerea B05.10   10 10
No Yes Sclerotinia sclerotiorum   13 13
No Yes Blumeria graminis 22   13 13
No Yes Didymella exigua CBS 183.55 v1.0   13 13
No Yes Leptosphaeria maculans 22   12 12
No Yes Setosphaeria turcica v1.0   13 13
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   13 13
No Yes Cochliobolus victoriae FI3 v1.0   13 13
No Yes Cochliobolus carbonum 26-R-13 v1.0   13 13
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 13 13
No Yes Alternaria brassicicola   12 12
No Yes Cochliobolus lunatus m118 v2.0   13 13
No Yes Pyrenophora teres f. teres 22   13 13
No Yes Pyrenophora tritici-repentis   13 13
No Yes Stagonospora nodorum   13 13
No Yes Mycosphaerella graminicola IPO323   13 13
No Yes Zasmidium cellare ATCC 36951 v1.0   15 15
No Yes Dothistroma septosporum   14 14
No Yes Septoria musiva v1.0   13 13
No Yes Mycosphaerella fijiensis CIRAD86   12 12
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   14 14
No Yes Paracoccidioides brasiliensis Pb18   14 14
No Yes Coccidioides posadasii RMSCC 3488   14 14
No Yes Coccidioides immitis RS   14 14
No Yes Ajellomyces dermatitidis SLH14081   13 13
No Yes Histoplasma capsulatum class NAmI strain WU24   14 14
No Yes Microsporum canis CBS 113480   14 14
No Yes Trichophyton equinum CBS 127.97   14 14
No Yes Trichophyton verrucosum HKI 0517   13 13
No Yes Arthroderma benhamiae CBS 112371   13 13
No Yes Trichophyton tonsurans CBS 112818   13 13
No Yes Trichophyton rubrum CBS 118892   14 14
No Yes Uncinocarpus reesii 1704   12 12
No Yes Aspergillus zonatus v1.0   13 13
No Yes Penicillium chrysogenum Wisconsin 54-1255   14 14
No Yes Penicillium chrysogenum v1.0   14 14
No Yes Aspergillus acidus v1.0   14 14
No Yes Aspergillus fumigatus Af293   13 13
No Yes Aspergillus brasiliensis v1.0   14 14
No Yes Aspergillus nidulans FGSC A4   15 15
No Yes Aspergillus sydowii v1.0   14 14
No Yes Aspergillus versicolor v1.0   14 14
No Yes Aspergillus glaucus   13 13
No Yes Aspergillus carbonarius ITEM 5010   13 13
No Yes Neosartorya fischeri NRRL 181   14 14
No Yes Aspergillus terreus NIH2624   13 13
No Yes Aspergillus tubingensis v1.0   14 14
No Yes Aspergillus wentii v1.0   14 14
No Yes Aspergillus oryzae RIB40   13 13
No Yes Aspergillus niger 22   13 13
No Yes Aspergillus niger ATCC 1015   6 6
No Yes Aspergillus flavus NRRL3357   12 12
No Yes Aspergillus clavatus NRRL 1   13 13
No Yes Penicillium marneffei ATCC 18224   13 13
No Yes Tuber melanosporum Mel28 22   14 14
No Yes Tuber melanosporum Vittad Perigord truffle 14 14
No Yes Hansenula polymorpha v2.0   11 11
No Yes Dekkera bruxellensis CBS 2499 v2.0   14 14
No Yes Pichia membranifaciensv1.0   13 13
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   14 14
No Yes Candida dubliniensis CD36   15 15
No Yes Candida tropicalis MYA-3404   15 15
No Yes Candida parapsilosis   13 13
No Yes Candida albicans SC5314   15 15
No Yes Lodderomyces elongisporus NRRL YB-4239   14 13
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   14 14
No Yes Pichia stipitis CBS 6054   13 13
No Yes Candida guilliermondii ATCC 6260   14 14
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   14 14
No Yes Debaromyces hansenii   13 13
No Yes Wickerhamomyces anomalus   15 15
No Yes Pichia pastoris GS115   13 13
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   10 10
No Yes Yarrowia lipolytica CLIB122   14 14
No Yes Candida lusitaniae ATCC 42720   13 13
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   13 13
No Yes Vanderwaltozyma polyspora DSM 70294   18 18
No Yes Candida glabrata CBS138   16 16
No Yes Kluyveromyces thermotolerans CBS 6340   14 14
No Yes Lachancea kluyveri   14 14
No Yes Kluyveromyces waltii   14 14
No Yes Ashbya gossypii ATCC 10895   14 14
No Yes Zygosaccharomyces rouxii   13 13
No Yes Saccharomyces mikatae MIT   15 15
No Yes Saccharomyces paradoxus MIT   15 15
No Yes Saccharomyces cerevisiae 76 Baker's yeast 15 15
No Yes Saccharomyces bayanus MIT   14 14
No Yes Kluyveromyces lactis   12 12
No Yes Schizosaccharomyces cryophilus OY26 22   13 13
No Yes Schizosaccharomyces octosporus yFS286   13 13
No Yes Schizosaccharomyces japonicus yFS275   12 12
No Yes Schizosaccharomyces pombe Fission yeast 14 14
No Yes Catenaria anguillulae PL171 v1.0   10 10
No Yes Allomyces macrogynus ATCC 38327   28 28
No Yes Spizellomyces punctatus DAOM BR117   17 17
No Yes Dictyostelium discoideum   12 11
No Yes Dictyostelium purpureum   9 9
No Yes Entamoeba dispar 1.2   7 7
No Yes Entamoeba invadens 1.2   8 8
No Yes Entamoeba histolytica 1   7 7
No Yes Selaginella moellendorffii   11 11
No Yes Pinus taeda Loblolly pine 7 7
No Yes Picea abies Norway spruce 4 4
No Yes Eucalyptus grandis v201 Rose gum 14 14
No Yes Theobroma cacao B97-61/B2 v1 Cacao 7 7
No Yes Gossypium raimondii v221   50 50
No Yes Citrus clementina v165   10 10
No Yes Citrus sinensis v154 Sweet orange 9 9
No Yes Thellungiella halophila v173   7 7
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 13 13
No Yes Capsella rubella v183   12 12
No Yes Arabidopsis lyrata Lyrate rockcress 8 8
No Yes Arabidopsis thaliana 10 Thale cress 11 11
No Yes Carica papaya Papaya 6 6
No Yes Medicago truncatula Barrel medic 20 20
No Yes Phaseolus vulgaris v186 French bean 13 13
No Yes Glycine max v109 Soybean 17 17
No Yes Cucumis sativus v122 Cucumber 13 13
No Yes Fragaria vesca Wild strawberry 8 8
No Yes Malus domestica v196 Apple 17 17
No Yes Prunus persica v139 Peach 9 9
No Yes Linum usitatissimum v200 Flax 15 15
No Yes Manihot esculenta v147 Cassava 10 10
No Yes Populus trichocarpa v156 Black cottonwood 13 13
No Yes Vitis vinifera Wine grape 7 7
No Yes Mimulus guttatus v140 Spotted monkey flower 10 10
No Yes Solanum lycopersicum v.2.3 Tomato 10 10
No Yes Solanum tuberosum Potato 7 7
No Yes Actinidia chinensis Hongyang   13 13
No Yes Aquilegia coerulea v195   10 10
No Yes Triticum urartu 22   7 7
No Yes Triticum aestivum 22 Bread wheat 14 14
No Yes Aegilops tauschii 22   5 5
No Yes Brachypodium distachyon Stiff brome 11 11
No Yes Oryza barthii 22 African wild rice 12 12
No Yes Oryza meridionalis 22   15 15
No Yes Oryza glumaepatula 22   14 14
No Yes Oryza glaberrima African rice 6 6
No Yes Oryza punctata 22   12 12
No Yes Oryza nivara 22   20 20
No Yes Oryza brachyantha 22 Malo sina 8 8
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 10 10
No Yes Oryza sativa v193 Rice 10 10
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 11 11
No Yes Panicum virgatum v202 Switchgrass 16 16
No Yes Setaria italica v164 Foxtail millet 11 11
No Yes Zea mays subsp. mays Maize 20 20
No Yes Zea mays v181 Maize 21 21
No Yes Sorghum bicolor Sorghum 8 8
No Yes Musa balbisiana Balbis banana 9 9
No Yes Musa acuminata 22 Wild Malaysian banana 12 12
No Yes Amborella trichopoda 22   5 5
No Yes Physcomitrella patens   9 9
No Yes Coccomyxa subellipsoidea sp. C-169 v2   5 5
No Yes Asterochloris sp. Cgr/DA1pho v1.0   5 5
No Yes Chlorella variabilis sp. NC64A   4 4
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   6 6
No Yes Volvox carteri v199   6 6
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus sp. RCC809   7 7
No Yes Ostreococcus lucimarinus CCE9901   7 7
No Yes Ostreococcus tauri   8 8
No Yes Bathycoccus prasinos   5 5
No Yes Micromonas sp. RCC299   5 5
No Yes Micromonas pusilla CCMP1545 v3.0   4 4
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   32 30
No Yes Bigelowiella natans CCMP2755 22   40 36
No Yes Giardia lamblia 2.3   7 7
No Yes Cyanophora paradoxa   8 7
No Yes Leishmania mexicana 2.4   3 3
No Yes Leishmania major strain Friedlin   3 3
No Yes Leishmania infantum JPCM5 2.4   3 3
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   3 3
No Yes Trypanosoma vivax   4 4
No Yes Trypanosoma cruzi strain CL Brener   5 5
No Yes Trypanosoma congolense 2.4   5 5
No Yes Trypanosoma brucei gambiense v4.1   4 4
No Yes Trypanosoma brucei TREU927 v4.1   4 4
No Yes Ectocarpus siliculosus   29 29
No Yes Aureococcus anophagefferens   16 16
No Yes Albugo laibachii 22   76 75
No Yes Pythium iwayamai DAOM BR242034 22   74 74
No Yes Pythium arrhenomanes ATCC 12531 22   69 69
No Yes Pythium ultimum v1.7-2   90 89
No Yes Pythium aphanidermatum DAOM BR444 22   83 80
No Yes Pythium irregulare DAOM BR486 22   90 88
No Yes Pythium vexans DAOM BR484 22   77 77
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 107 103
No Yes Phytophthora sojae 1.1   102 99
No Yes Phytophthora infestans T30-4   111 110
No Yes Phytophthora capsici   86 84
No Yes Hyaloperonospora arabidopsidis 22   74 74
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 6
No Yes Fragilariopsis cylindrus   10 10
No Yes Thalassiosira pseudonana CCMP1335   9 9
No Yes Perkinsus marinus ATCC 50983   19 18
No Yes Paramecium tetraurelia   182 158
No Yes Tetrahymena thermophila SB210 1   56 50
No Yes Ichthyophthirius multifiliis strain G5   19 18
No Yes Cryptosporidium hominis   3 3
No Yes Cryptosporidium muris   3 3
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   5 4
No Yes Toxoplasma gondii VEG   5 4
No Yes Toxoplasma gondii ME49   5 4
No Yes Toxoplasma gondii GT1   5 4
No Yes Babesia bovis T2Bo   4 4
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   2 2
No Yes Plasmodium vivax SaI-1 7.0   2 2
No Yes Plasmodium knowlesi strain H   2 2
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Plasmodium chabaudi   2 2
No Yes Plasmodium berghei ANKA   2 2
No Yes Symbiodinium minutum clade B1 v1.2   23 23
No Yes Naegleria gruberi   18 18
No Yes Trichomonas vaginalis   9 9
No Yes Guillardia theta CCMP2712 v1.0   29 29
No Yes Emiliania huxleyi CCMP1516   34 34
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 97 97
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 26 26
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 20 19
No Yes Ascaris suum Victoria/Ghent Pig roundworm 13 13
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 19 18
No Yes Cryptococcus neoformans var. grubii H99   12 12
No Yes Cryptococcus neoformans B-3501A   12 12
No Yes Cryptococcus neoformans JEC21   12 12
No Yes Paracoccidioides brasiliensis Pb01   13 13
No Yes Paracoccidioides brasiliensis Pb03   13 13
No Yes Coccidioides posadasii str. Silveira   14 14
No Yes Coccidioides immitis RMSCC 3703   11 11
No Yes Coccidioides immitis RMSCC 2394   14 14
No Yes Coccidioides immitis H538.4   14 14
No Yes Ajellomyces dermatitidis ER-3   13 13
No Yes Histoplasma capsulatum H143   13 13
No Yes Histoplasma capsulatum H88   14 14
No Yes Histoplasma capsulatum G186AR   13 13
No Yes Aspergillus fumigatus A1163   13 13
No Yes Candida albicans WO-1   16 16
No Yes Saccharomyces cerevisiae UC5   14 14
No Yes Saccharomyces cerevisiae PW5   11 11
No Yes Saccharomyces cerevisiae FL100   10 10
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   6 6
No Yes Saccharomyces cerevisiae CBS7960   12 12
No Yes Saccharomyces cerevisiae YJM269   13 13
No Yes Saccharomyces cerevisiae T7   15 15
No Yes Saccharomyces cerevisiae FostersB   11 11
No Yes Saccharomyces cerevisiae FostersO   12 12
No Yes Saccharomyces cerevisiae VL3   15 15
No Yes Saccharomyces cerevisiae Vin13   13 13
No Yes Saccharomyces cerevisiae LalvinQA23   13 13
No Yes Saccharomyces cerevisiae AWRI796   12 12
No Yes Saccharomyces cerevisiae Sigma1278b   15 15
No Yes Saccharomyces cerevisiae W303   15 15
No Yes Saccharomyces cerevisiae JAY291   15 15
No Yes Saccharomyces cerevisiae AWRI1631   13 13
No Yes Saccharomyces cerevisiae YPS163   4 4
No Yes Saccharomyces cerevisiae M22   3 3
No Yes Saccharomyces cerevisiae T73   7 7
No Yes Saccharomyces cerevisiae CLIB215   12 12
No Yes Saccharomyces cerevisiae Y10   3 3
No Yes Saccharomyces cerevisiae YJM789   15 15
No Yes Saccharomyces cerevisiae YJM789   15 15
No Yes Saccharomyces cerevisiae RM11-1a   14 14
No Yes Saccharomyces cerevisiae RM11-1a   14 14
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 15 15
No Yes Schizosaccharomyces pombe 972h-   14 14
No Yes Batrachochytrium dendrobatidis JEL423   17 17
No Yes Batrachochytrium dendrobatidis JAM81   16 16
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 7 7
No Yes Hordeum vulgare 22 Domesticated barley 13 13
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 8 8
No Yes Trypanosoma brucei Lister 427 v4.1   4 4
No Yes Neospora caninum Nc-Liverpool 6.2   5 4
No Yes Plasmodium falciparum HB3   2 2
No Yes Plasmodium falciparum Dd2   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 190 188
No Yes Homo sapiens (NCBI version) Human 76 76
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 52 52
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 13 13
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 15 15
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 13 13
No Yes Moniliophthora perniciosa FA553 (Genome survey)   5 5
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   6 6
No Yes Malus x domestica (Duplicate) Apple 17 17
No Yes Ricinus communis (Early assembly) Castor bean 7 7
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   18 18
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 10 10
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 10 10
No Yes Phoenix dactylifera (Early draft) Date palm 3 3
No Yes Homo sapiens 69_37 Human 52 52
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 49 49
No Yes Gorilla gorilla 69_3.1 Western gorilla 48 48
No Yes Pongo abelii 69_2 Sumatran orangutan 50 50
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 50 50
No Yes Macaca mulatta 69_1 Rhesus monkey 50 50
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 54 54
No Yes Otolemur garnettii 69_3 Small-eared galago 51 51
No Yes Microcebus murinus 69_1 Gray mouse lemur 48 48
No Yes Rattus norvegicus 69_3.4 Norway rat 52 52
No Yes Mus musculus 69_38 House mouse 52 52
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 40 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 39 39
No Yes Cavia porcellus 69_3 Domestic guinea pig 47 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 50 50
No Yes Ochotona princeps 69 American pika 40 40
No Yes Tupaia belangeri 69 Northern tree shrew 35 35
No Yes Sus scrofa 69_10.2 Pig 48 48
No Yes Bos taurus 69_3.1 Cattle 46 46
No Yes Vicugna pacos 69_1 Alpaca 33 33
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 45 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 50 50
No Yes Ailuropoda melanoleuca 69_1 Giant panda 51 51
No Yes Canis familiaris 69_3.1 Dog 53 53
No Yes Felis catus 69 Domestic cat 33 33
No Yes Equus caballus 69_2 Horse 51 51
No Yes Myotis lucifugus 69_2.0 Little brown bat 50 50
No Yes Pteropus vampyrus 69_1 Large flying fox 45 45
No Yes Sorex araneus 69_1 European shrew 28 28
No Yes Erinaceus europaeus 69 Western European hedgehog 38 38
No Yes Procavia capensis 69_1 Cape rock hyrax 42 42
No Yes Loxodonta africana 69_3 African savanna elephant 47 47
No Yes Echinops telfairi 69 Small Madagascar hedgehog 38 38
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 42 42
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 28 28
No Yes Macropus eugenii 69_1.0 Tammar wallaby 41 41
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 50 50
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 47 47
No Yes Ornithorhynchus anatinus 69_5 Platypus 39 39
No Yes Petromyzon marinus 69_7.0 Sea lamprey 23 23
No Yes Meleagris gallopavo 69_2 Turkey 40 40
No Yes Gallus gallus 69_2 Chicken 46 46
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 49 49
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 43 43
No Yes Anolis carolinensis 69_2.0 Green anole 44 44
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 47 47
No Yes Latimeria chalumnae 69_1 Coelacanth 47 47
No Yes Gadus morhua 69_1 Atlantic cod 55 55
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 61 61
No Yes Takifugu rubripes 69_4 Torafugu 56 56
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 55 55
No Yes Oryzias latipes 69_1 Japanese medaka 51 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 55 55
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 58 58
No Yes Danio rerio 69_9 Zebrafish 63 63
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 22 22
No Yes Ciona intestinalis 69 Vase tunicate 20 20
No Yes Drosophila melanogaster 69_5 Fruit fly 16 16
No Yes Caenorhabditis elegans 69_215 Roundworm 13 12
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 15 15
No Yes Arabidopsis thaliana 10 Thale cress 9 9
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   33215 33120
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   128 125
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   2722 2697
No Yes Uniprot 2018_03 genome   34954 34697
No Yes Global Ocean Sampling Expedition (GOS)   73 73
No Yes PDB chains (SCOP 1.75) (PDB)   8 8
No Yes Protein Data Bank (all PDB sequenc)   132 132
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   190 190
No Yes TargetDB (Targets)   119 117

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