SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Anthrax toxin lethal factor, N- and C-terminal domains family domain assignments
in
all bacterial and archaeal genomes

Assignment details

(show help)

7 selected genomes have 22 significant domains in 15 proteins.


Bacillus cereus 03BB102 has 4 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|225871617|ref|YP_002752975.1|   1.54e-97   0.0000137   50-287   1j7n A:27-263  
gi|225871636|ref|YP_002752994.1|   1.32e-52   0.000000997   58-283   1j7n A:27-263  
  1.31e-22   0.0044   490-694   1j7n A:551-773  
gi|225871643|ref|YP_002753001.1|   2.05e-101   0.000000000701   60-296   1j7n A:27-263  
  1.72e-53   0.00000000126   584-805   1j7n A:551-773  

Bacillus anthracis str. A0248 has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|229599780|ref|YP_002860835.1|   2.05e-101   0.000000000701   60-296   1j7n A:27-263  
  4.76e-53   0.00000000121   584-805   1j7n A:551-773  
gi|229599815|ref|YP_002860815.1|   3.44e-97   0.0000135   50-287   1j7n A:27-263  

Bacillus cereus biovar anthracis str. CI has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|301068173|ref|YP_003786944.1|   1.54e-97   0.0000137   50-287   1j7n A:27-263  
gi|301068204|ref|YP_003786975.1|   3.37e-101   0.000000000736   60-296   1j7n A:27-263  
  1.72e-53   0.00000000126   584-805   1j7n A:551-773  

Bacillus anthracis str. H9401 has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386733693|ref|YP_006204079.1|   3.22e-97   0.0000135   17-254   1j7n A:27-263  
gi|386733720|ref|YP_006204106.1|   2.05e-101   0.000000000701   60-296   1j7n A:27-263  
  4.76e-53   0.00000000121   584-805   1j7n A:551-773  

Bacillus anthracis str. CDC 684 has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|227811562|ref|YP_002811573.1|   3.44e-97   0.0000135   50-287   1j7n A:27-263  
gi|227811590|ref|YP_002811601.1|   2.05e-101   0.000000000701   60-296   1j7n A:27-263  
  4.76e-53   0.00000000121   584-805   1j7n A:551-773  

Bacillus anthracis str. 'Ames Ancestor' has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|47566456|ref|YP_016473.2|   3.44e-97   0.0000135   50-287   1j7n A:27-263  
gi|47566484|ref|YP_016503.2|   2.05e-101   0.000000000701   60-296   1j7n A:27-263  
  4.76e-53   0.00000000121   584-805   1j7n A:551-773  

Bacillus anthracis str. A2012 has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|21392820|ref|NP_652900.1|   3.44e-97   0.0000135   50-287   1j7n A:27-263  
gi|21392848|ref|NP_652928.1|   2.05e-101   0.000000000701   60-296   1j7n A:27-263  
  4.76e-53   0.00000000121   584-805   1j7n A:551-773  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Anthrax toxin lethal factor, N- and C-terminal domains domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   879 879
No Yes Bacillus cereus 03BB102   4 3
No Yes Bacillus anthracis str. A0248   3 2
No Yes Bacillus cereus biovar anthracis str. CI   3 2
No Yes Bacillus anthracis str. H9401   3 2
No Yes Bacillus anthracis str. CDC 684   3 2
No Yes Bacillus anthracis str. 'Ames Ancestor'   3 2
No Yes Bacillus anthracis str. A2012   3 2
No Yes NCBI 2017_08 genome   425 299
No Yes STRING v9.0.5 (STRING)   13 9
No Yes Uniprot 2018_03 genome   71 63
No Yes NCBI plasmid sequences (Plasmids)   28 19
No Yes PDB chains (SCOP 1.75) (PDB)   5 3
No Yes Protein Data Bank (all PDB sequenc)   95 80
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   220 220

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]