SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Variable surface antigen VlsE superfamily domain assignments
in
Coniophora puteana

Network of domain occurrence in all genomes



No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a Variable surface antigen VlsE domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   5226 5226
No Yes Borrelia afzelii PKo   4 3
No Yes Borrelia burgdorferi B31   1 1
No Yes Borrelia recurrentis A1   18 17
No Yes Borrelia duttonii Ly   68 68
No Yes Borrelia crocidurae str. Achema   156 156
No Yes Borrelia hermsii DAH   18 18
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris A76   1 1
No Yes Borrelia valaisiana VS116   5 3
No Yes Borrelia afzelii PKo   4 3
No Yes Borrelia burgdorferi JD1   2 2
No Yes NCBI 2017_08 genome   1425 1334
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   95 88
No Yes Uniprot 2018_03 genome   2971 2889
No Yes NCBI plasmid sequences (Plasmids)   429 338
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   8 8
No Yes UniProt viral sequences (Viral)   1 1

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]