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Plakin repeat superfamily domain assignments
in
Monodelphis domestica 69_5

Assignment details

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Monodelphis domestica 69_5 has 29 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMODP00000007487   7.59e-19   1654-1753   Plakin repeat  
ENSMODP00000012498   1.83e-84   2227-2464   Plakin repeat  
  4.71e-75   1984-2218   Plakin repeat  
  1.92e-68   2538-2578,2625-2819   Plakin repeat  
  0.0000000000942   2476-2531   Plakin repeat  
ENSMODP00000012728   7.32e-76   2814-3035   Plakin repeat  
  7.59e-36   2510-2658   Plakin repeat  
  1.83e-22   3093-3167   Plakin repeat  
  1.7e-21   2683-2809   Plakin repeat  
  0.0000000432   3050-3087   Plakin repeat  
ENSMODP00000023407   1.57e-44   1723-1922   Plakin repeat  
  2.49e-38   1925-2110   Plakin repeat  
ENSMODP00000029473   5.1e-50   1767-1946   Plakin repeat  
  6.63e-45   2391-2609   Plakin repeat  
  4.05e-44   1546-1763   Plakin repeat  
  1.18e-23   2701-2806   Plakin repeat  
  0.0000000000000288   2593-2697   Plakin repeat  
  0.00000000602   2330-2408   Plakin repeat  
ENSMODP00000032445   4.36e-66   1-35,74-271   Plakin repeat  
ENSMODP00000039055   6.02e-65   46-240   Plakin repeat  
  1.57e-44   243-406   Plakin repeat  
ENSMODP00000039505   1.96e-86   985-1224   Plakin repeat  
  8.5e-86   1639-1883   Plakin repeat  
  1.57e-85   2166-2410   Plakin repeat  
  1.14e-84   2693-2935   Plakin repeat  
  1.02e-83   20-259   Plakin repeat  
  3.92e-73   662-900   Plakin repeat  
  1.31e-72   1317-1550   Plakin repeat  
  7.46e-72   341-580   Plakin repeat  

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Select to display   Genome       Domains   Proteins
No Yes ALL   75498 75498
No Yes Homo sapiens 76_38 Human 136 26
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 27 6
No Yes Gorilla gorilla 76_3.1 Western gorilla 29 11
No Yes Pongo abelii 76_2 Sumatran orangutan 10 4
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 5 2
No Yes Papio anubis 76 Olive baboon 34 8
No Yes Macaca mulatta 76_1 Rhesus monkey 49 12
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 45 14
No Yes Otolemur garnettii 76_3 Small-eared galago 19 4
No Yes Microcebus murinus 76_1 Gray mouse lemur 22 6
No Yes Rattus norvegicus 76_5.0 Norway rat 36 10
No Yes Mus musculus 76_38 House mouse 142 28
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 21 6
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 22 6
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 24 7
No Yes Cavia porcellus 76_3 Domestic guinea pig 21 6
No Yes Oryctolagus cuniculus 76_2 Rabbit 11 5
No Yes Ochotona princeps 76 American pika 16 6
No Yes Tupaia belangeri 76 Northern tree shrew 12 4
No Yes Sus scrofa 76_10.2 Pig 15 5
No Yes Bos taurus 76_3.1 Cattle 22 6
No Yes Ovis aries 76_3.1 Sheep 31 8
No Yes Vicugna pacos 76_1 Alpaca 5 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 21 6
No Yes Mustela putorius furo 76_1.0 Domestic ferret 20 5
No Yes Ailuropoda melanoleuca 76_1 Giant panda 26 9
No Yes Canis familiaris 76_3.1 Dog 33 10
No Yes Felis catus 76_6.2 Domestic cat 16 5
No Yes Equus caballus 76_2 Horse 60 13
No Yes Myotis lucifugus 76_2.0 Little brown bat 22 6
No Yes Pteropus vampyrus 76_1 Large flying fox 21 6
No Yes Sorex araneus 76_1 European shrew 15 5
No Yes Erinaceus europaeus 76 Western European hedgehog 19 6
No Yes Procavia capensis 76_1 Cape rock hyrax 18 5
No Yes Loxodonta africana 76_3 African savanna elephant 48 11
No Yes Echinops telfairi 76 Small Madagascar hedgehog 16 5
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 29 7
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 9 3
No Yes Macropus eugenii 76_1.0 Tammar wallaby 17 6
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 19 7
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 29 8
No Yes Ornithorhynchus anatinus 76_5 Platypus 14 6
No Yes Saccoglossus kowalevskii v3.0   212 20
No Yes Petromyzon marinus 76_7.0 Sea lamprey 14 6
No Yes Meleagris gallopavo 76_2 Turkey 23 7
No Yes Gallus gallus 76_4 Chicken 10 5
No Yes Anas platyrhynchos 76_1.0 Mallard 21 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 20 6
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 23 7
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 9 4
No Yes Anolis carolinensis 76_2.0 Green anole 33 7
No Yes Xenopus laevis African clawed frog 7 5
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 20 7
No Yes Latimeria chalumnae 76_1 Coelacanth 20 6
No Yes Lepisosteus oculatus 76 Spotted gar 32 9
No Yes Gadus morhua 76_1 Atlantic cod 36 9
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 31 9
No Yes Takifugu rubripes 76_4 Torafugu 104 25
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 39 10
No Yes Oryzias latipes 76_1 Japanese medaka 37 11
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 29 8
No Yes Poecilia formosa 76 Amazon molly 40 10
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 43 11
No Yes Astyanax mexicanus 76 Mexican tetra 40 10
No Yes Danio rerio 76_9 Zebrafish 69 15
No Yes Oikopleura dioica   13 7
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 19 12
No Yes Ciona intestinalis 76 Vase tunicate 11 5
No Yes Adineta vaga   21 7
No Yes Octopus bimaculoides 280   125 7
No Yes Crassostrea gigas 22 Pacific oyster 33 3
No Yes Lottia gigantea Owl limpet 31 4
No Yes Helobdella robusta   14 8
No Yes Capitella sp. I   57 5
No Yes Danaus plexippus OGS1.0 Monarch butterfly 25 1
No Yes Heliconius melpomene Postman butterfly 25 1
No Yes Bombyx mori Domestic silkworm 16 2
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 22 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 20 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 22 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 21 1
No Yes Atta cephalotes v1.1   21 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 21 1
No Yes Lucilia cuprina Australian sheep blowfly 18 1
No Yes Drosophila grimshawi 1.3   16 2
No Yes Drosophila willistoni 1.3   16 1
No Yes Drosophila pseudoobscura 2.13   16 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   15 1
No Yes Drosophila yakuba 1.3   15 1
No Yes Drosophila simulans 1.3   5 1
No Yes Drosophila sechellia 1.3   16 1
No Yes Drosophila melanogaster 76_5 Fruit fly 32 19
No Yes Drosophila erecta 1.3   15 1
No Yes Drosophila ananassae 1.3   14 1
No Yes Drosophila virilis 1.2   9 1
No Yes Drosophila mojavensis 1.3   15 1
No Yes Megaselia scalaris 22   2 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 17 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 15 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 16 1
No Yes Tribolium castaneum 3.0 Red flour beetle 20 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 17 2
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Tetranychus urticae Two-spotted spider mite 3 2
No Yes Pristionchus pacificus   8 1
No Yes Meloidogyne incognita Southern root-knot nematode 21 2
No Yes Meloidogyne hapla   16 4
No Yes Onchocerca volvulus 22   10 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 9 1
No Yes Caenorhabditis japonica   10 1
No Yes Caenorhabditis remanei   11 1
No Yes Caenorhabditis elegans 76_235 Roundworm 49 5
No Yes Caenorhabditis briggsae 2   10 1
No Yes Trichinella spiralis 22   10 1
No Yes Hymenolepis microstoma   5 3
No Yes Echinococcus multilocularis   4 2
No Yes Echinococcus granulosus   4 2
No Yes Taenia solium Pork tapeworm 3 2
No Yes Schistosoma mansoni   10 8
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 23 8
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 25 12
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 16 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 49 5
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 202 39
No Yes Homo sapiens (NCBI version) Human 89 15
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 22 6
No Yes Heliconius numata (Incomplete)   3 3
No Yes Loa loa v3.3 (Request) Eye worm 9 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 11 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 11 2
No Yes Homo sapiens 69_37 Human 50 9
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 22 5
No Yes Gorilla gorilla 69_3.1 Western gorilla 16 5
No Yes Pongo abelii 69_2 Sumatran orangutan 10 4
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 10 3
No Yes Macaca mulatta 69_1 Rhesus monkey 16 5
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 22 7
No Yes Otolemur garnettii 69_3 Small-eared galago 19 4
No Yes Microcebus murinus 69_1 Gray mouse lemur 22 6
No Yes Rattus norvegicus 69_3.4 Norway rat 25 7
No Yes Mus musculus 69_38 House mouse 22 6
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 21 6
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 22 6
No Yes Cavia porcellus 69_3 Domestic guinea pig 21 6
No Yes Oryctolagus cuniculus 69_2 Rabbit 17 7
No Yes Ochotona princeps 69 American pika 16 6
No Yes Tupaia belangeri 69 Northern tree shrew 12 4
No Yes Sus scrofa 69_10.2 Pig 15 5
No Yes Bos taurus 69_3.1 Cattle 22 6
No Yes Vicugna pacos 69_1 Alpaca 5 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 21 6
No Yes Mustela putorius furo 69_1.0 Domestic ferret 20 5
No Yes Ailuropoda melanoleuca 69_1 Giant panda 23 7
No Yes Canis familiaris 69_3.1 Dog 21 6
No Yes Felis catus 69 Domestic cat 12 5
No Yes Equus caballus 69_2 Horse 20 6
No Yes Myotis lucifugus 69_2.0 Little brown bat 22 6
No Yes Pteropus vampyrus 69_1 Large flying fox 21 6
No Yes Sorex araneus 69_1 European shrew 15 5
No Yes Erinaceus europaeus 69 Western European hedgehog 19 6
No Yes Procavia capensis 69_1 Cape rock hyrax 18 5
No Yes Loxodonta africana 69_3 African savanna elephant 33 7
No Yes Echinops telfairi 69 Small Madagascar hedgehog 16 5
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 13 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 9 3
No Yes Macropus eugenii 69_1.0 Tammar wallaby 17 6
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 18 6
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 29 8
No Yes Ornithorhynchus anatinus 69_5 Platypus 14 6
No Yes Petromyzon marinus 69_7.0 Sea lamprey 13 5
No Yes Meleagris gallopavo 69_2 Turkey 21 6
No Yes Gallus gallus 69_2 Chicken 9 4
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 20 6
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 9 4
No Yes Anolis carolinensis 69_2.0 Green anole 32 7
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 20 7
No Yes Latimeria chalumnae 69_1 Coelacanth 20 6
No Yes Gadus morhua 69_1 Atlantic cod 36 9
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 26 8
No Yes Takifugu rubripes 69_4 Torafugu 33 9
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 38 9
No Yes Oryzias latipes 69_1 Japanese medaka 37 11
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 29 8
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 34 9
No Yes Danio rerio 69_9 Zebrafish 47 10
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 16 11
No Yes Ciona intestinalis 69 Vase tunicate 11 5
No Yes Drosophila melanogaster 69_5 Fruit fly 14 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   49554 7301
No Yes STRING v9.0.5 (STRING)   775 197
No Yes Uniprot 2018_03 genome   17727 3096
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   13 12
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   26 26
No Yes TargetDB (Targets)   53 31

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