SUPERFAMILY 1.75 HMM library and genome assignments server

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Family A G protein-coupled receptor-like superfamily domain assignments
in
Pasteurella multocida subsp. multocida str. Pm70


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Select to display   Genome       Domains   Proteins
No Yes ALL   733133 733133
No Yes Homo sapiens 76_38 Human 1483 1480
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 608 606
No Yes Gorilla gorilla 76_3.1 Western gorilla 796 793
No Yes Pongo abelii 76_2 Sumatran orangutan 580 578
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 450 449
No Yes Papio anubis 76 Olive baboon 590 587
No Yes Macaca mulatta 76_1 Rhesus monkey 843 838
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 903 899
No Yes Otolemur garnettii 76_3 Small-eared galago 1041 1038
No Yes Microcebus murinus 76_1 Gray mouse lemur 515 492
No Yes Rattus norvegicus 76_5.0 Norway rat 1838 1834
No Yes Mus musculus 76_38 House mouse 2080 2077
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 557 540
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1206 1202
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1572 1503
No Yes Cavia porcellus 76_3 Domestic guinea pig 1166 1164
No Yes Oryctolagus cuniculus 76_2 Rabbit 1183 1182
No Yes Ochotona princeps 76 American pika 432 412
No Yes Tupaia belangeri 76 Northern tree shrew 664 637
No Yes Sus scrofa 76_10.2 Pig 1499 1494
No Yes Bos taurus 76_3.1 Cattle 1374 1368
No Yes Ovis aries 76_3.1 Sheep 988 956
No Yes Vicugna pacos 76_1 Alpaca 449 420
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 244 235
No Yes Mustela putorius furo 76_1.0 Domestic ferret 998 997
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1110 1107
No Yes Canis familiaris 76_3.1 Dog 923 922
No Yes Felis catus 76_6.2 Domestic cat 1026 1022
No Yes Equus caballus 76_2 Horse 1289 1284
No Yes Myotis lucifugus 76_2.0 Little brown bat 803 796
No Yes Pteropus vampyrus 76_1 Large flying fox 541 526
No Yes Sorex araneus 76_1 European shrew 580 560
No Yes Erinaceus europaeus 76 Western European hedgehog 581 557
No Yes Procavia capensis 76_1 Cape rock hyrax 481 466
No Yes Loxodonta africana 76_3 African savanna elephant 2338 2336
No Yes Echinops telfairi 76 Small Madagascar hedgehog 579 548
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 2127 1892
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 610 590
No Yes Macropus eugenii 76_1.0 Tammar wallaby 715 690
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 1137 1134
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 1406 1389
No Yes Ornithorhynchus anatinus 76_5 Platypus 1337 1332
No Yes Saccoglossus kowalevskii v3.0   581 581
No Yes Petromyzon marinus 76_7.0 Sea lamprey 236 234
No Yes Meleagris gallopavo 76_2 Turkey 343 342
No Yes Gallus gallus 76_4 Chicken 335 334
No Yes Anas platyrhynchos 76_1.0 Mallard 404 401
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 523 522
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 334 333
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 701 694
No Yes Anolis carolinensis 76_2.0 Green anole 434 432
No Yes Xenopus laevis African clawed frog 349 349
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 839 836
No Yes Latimeria chalumnae 76_1 Coelacanth 605 590
No Yes Lepisosteus oculatus 76 Spotted gar 678 673
No Yes Gadus morhua 76_1 Atlantic cod 541 524
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 524 522
No Yes Takifugu rubripes 76_4 Torafugu 1538 1524
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 680 677
No Yes Oryzias latipes 76_1 Japanese medaka 622 617
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 535 534
No Yes Poecilia formosa 76 Amazon molly 614 590
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 718 714
No Yes Astyanax mexicanus 76 Mexican tetra 616 598
No Yes Danio rerio 76_9 Zebrafish 1082 1079
No Yes Oikopleura dioica   56 56
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 149 146
No Yes Ciona intestinalis 76 Vase tunicate 168 168
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1193 1165
No Yes Adineta vaga   972 964
No Yes Octopus bimaculoides 280   354 348
No Yes Crassostrea gigas 22 Pacific oyster 475 461
No Yes Lottia gigantea Owl limpet 339 336
No Yes Helobdella robusta   260 252
No Yes Capitella sp. I   1145 1138
No Yes Danaus plexippus OGS1.0 Monarch butterfly 112 110
No Yes Heliconius melpomene Postman butterfly 111 104
No Yes Bombyx mori Domestic silkworm 99 95
No Yes Nasonia vitripennis Jewel wasp 49 48
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 278 272
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 78 76
No Yes Linepithema humile v1.1 Argentine ant 99 98
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 91 89
No Yes Solenopsis invicta v.2.2.3 Red fire ant 89 88
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 91 91
No Yes Atta cephalotes v1.1   111 109
No Yes Camponotus floridanus v3.3 Florida carpenter ant 87 85
No Yes Lucilia cuprina Australian sheep blowfly 89 83
No Yes Drosophila grimshawi 1.3   100 94
No Yes Drosophila willistoni 1.3   98 90
No Yes Drosophila pseudoobscura 2.13   99 92
No Yes Drosophila persimilis 1.3   85 84
No Yes Drosophila suzukii   116 94
No Yes Drosophila yakuba 1.3   109 103
No Yes Drosophila simulans 1.3   88 86
No Yes Drosophila sechellia 1.3   105 98
No Yes Drosophila melanogaster 76_5 Fruit fly 211 196
No Yes Drosophila erecta 1.3   103 98
No Yes Drosophila ananassae 1.3   95 88
No Yes Drosophila virilis 1.2   94 88
No Yes Drosophila mojavensis 1.3   93 87
No Yes Megaselia scalaris 22   53 50
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 101 98
No Yes Culex pipiens quinquefasciatus Southern house mosquito 129 121
No Yes Anopheles darlingi 22 American malaria mosquito 73 70
No Yes Anopheles gambiae 49_3j African malaria mosquito 112 110
No Yes Tribolium castaneum 3.0 Red flour beetle 110 109
No Yes Pediculus humanus corporis (Early assembly) Human body louse 93 91
No Yes Acyrthosiphon pisum Pea aphid 62 61
No Yes Rhodnius prolixus 22   93 91
No Yes Daphnia pulex Common water flea 206 205
No Yes Strigamia maritima 22   107 106
No Yes Sarcoptes scabiei   76 69
No Yes Tetranychus urticae Two-spotted spider mite 100 98
No Yes Ixodes scapularis (Preliminary) Black-legged tick 167 165
No Yes Pristionchus pacificus   443 442
No Yes Meloidogyne incognita Southern root-knot nematode 360 352
No Yes Meloidogyne hapla   152 152
No Yes Onchocerca volvulus 22   177 173
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 113 110
No Yes Caenorhabditis japonica   449 441
No Yes Caenorhabditis brenneri   911 876
No Yes Caenorhabditis remanei   1139 1102
No Yes Caenorhabditis elegans 76_235 Roundworm 1160 1154
No Yes Caenorhabditis briggsae 2   858 830
No Yes Trichinella spiralis 22   91 89
No Yes Hymenolepis microstoma   64 64
No Yes Echinococcus multilocularis   68 67
No Yes Echinococcus granulosus   64 63
No Yes Taenia solium Pork tapeworm 84 84
No Yes Schistosoma mansoni   102 100
No Yes Mnemiopsis leidyi Sea walnut 794 769
No Yes Thelohanellus kitauei   20 20
No Yes Acropora digitifera v1.0   195 194
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1151 1138
No Yes Hydra vulgaris   102 102
No Yes Amphimedon queenslandica   220 216
No Yes Trichoplax adhaerens   424 423
No Yes Proterospongia sp. ATCC 50818   4 4
No Yes Monosiga brevicollis   2 2
No Yes Capsaspora owczarzaki ATCC 30864   11 11
No Yes Conidiobolus coronatus NRRL28638 v1.0   244 244
No Yes Phycomyces blakesleeanus   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sporisorium reilianum 22   4 4
No Yes Ustilago maydis   4 4
No Yes Mixia osmundae IAM 14324 v1.0   4 4
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   6 6
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   3 3
No Yes Melampsora laricis-populina   6 6
No Yes Rhodotorula graminis WP1 v1.0   5 5
No Yes Sporobolomyces roseus IAM 13481   3 3
No Yes Microbotryum violaceum 22   4 4
No Yes Wallemia sebi v1.0   2 2
No Yes Sphaerobolus stellatus v1.0   24 24
No Yes Piloderma croceum F 1598 v1.0   15 15
No Yes Serpula lacrymans var. lacrymans S7.9   4 4
No Yes Coniophora puteana   2 2
No Yes Hydnomerulius pinastri v2.0   2 2
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   2 2
No Yes Pisolithus microcarpus 441 v1.0   2 2
No Yes Pisolithus tinctorius Marx 270 v1.0   9 9
No Yes Scleroderma citrinum Foug A v1.0   6 6
No Yes Coprinopsis cinerea okayama7 130 v3   3 3
No Yes Pleurotus ostreatus Oyster mushroom 11 11
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 2 2
No Yes Galerina marginata v1.0   9 9
No Yes Hebeloma cylindrosporum h7 v2.0   6 6
No Yes Laccaria bicolor S238N-H82   6 6
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Schizophyllum commune   4 4
No Yes Stereum hirsutum FP-91666 SS1 v1.0   10 10
No Yes Heterobasidion annosum   5 5
No Yes Gloeophyllum trabeumv1.0   5 5
No Yes Punctularia strigosozonata v1.0   9 9
No Yes Sebacina vermifera MAFF 305830 v1.0   6 6
No Yes Fomitiporia mediterranea v1.0   3 3
No Yes Tulasnella calospora AL13/4D v1.0   8 8
No Yes Postia placenta   9 9
No Yes Wolfiporia cocos MD-104 SS10 v1.0   5 5
No Yes Fomitopsis pinicolav1.0   11 11
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   9 9
No Yes Phanerochaete chrysosporium RP-78 2.1   7 7
No Yes Dichomitus squalens   3 3
No Yes Trametes versicolor v1.0   3 3
No Yes Tremella mesenterica Witches' butter 4 4
No Yes Daldinia eschscholzii EC12 v1.0   7 7
No Yes Apiospora montagnei NRRL 25634 v1.0   11 11
No Yes Magnaporthe poae ATCC 64411 22   7 7
No Yes Magnaporthe grisea 70-15   8 8
No Yes Podospora anserina   9 9
No Yes Sporotrichum thermophile ATCC 42464   9 9
No Yes Thielavia terrestris NRRL 8126   10 10
No Yes Chaetomium globosum CBS 148.51   7 7
No Yes Neurospora tetrasperma   6 6
No Yes Neurospora discreta FGSC 8579   6 6
No Yes Neurospora crassa OR74A   6 6
No Yes Cryphonectria parasitica Chestnut blight fungus 11 11
No Yes Verticillium albo-atrum VaMs.102   6 6
No Yes Verticillium dahliae VdLs.17   9 9
No Yes Acremonium alcalophilumv 1.0   3 3
No Yes Glomerella graminicola 22   12 12
No Yes Fusarium graminearum   10 10
No Yes Nectria haematococca mpVI   15 15
No Yes Fusarium oxysporum f. sp. lycopersici 4286   13 13
No Yes Fusarium verticillioides 7600   11 11
No Yes Trichoderma asperellum CBS 433.97 v1.0   6 6
No Yes Trichoderma atroviride   6 6
No Yes Trichoderma citrinoviride v1.0   5 5
No Yes Trichoderma reesei 1.2   5 5
No Yes Trichoderma virens Gv29-8   5 5
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   5 5
No Yes Trichoderma harzianum CBS 226.95 v1.0   6 6
No Yes Amorphotheca resinae v1.0 Creosote fungus 7 7
No Yes Botrytis cinerea B05.10   6 6
No Yes Sclerotinia sclerotiorum   6 6
No Yes Blumeria graminis 22   4 4
No Yes Didymella exigua CBS 183.55 v1.0   8 8
No Yes Leptosphaeria maculans 22   7 7
No Yes Setosphaeria turcica v1.0   7 7
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   7 7
No Yes Cochliobolus victoriae FI3 v1.0   6 6
No Yes Cochliobolus carbonum 26-R-13 v1.0   6 6
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 6 6
No Yes Alternaria brassicicola   5 5
No Yes Cochliobolus lunatus m118 v2.0   7 7
No Yes Pyrenophora teres f. teres 22   6 6
No Yes Pyrenophora tritici-repentis   6 6
No Yes Stagonospora nodorum   6 6
No Yes Mycosphaerella graminicola IPO323   6 6
No Yes Zasmidium cellare ATCC 36951 v1.0   7 7
No Yes Dothistroma septosporum   10 10
No Yes Septoria musiva v1.0   8 8
No Yes Mycosphaerella fijiensis CIRAD86   8 8
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   7 7
No Yes Paracoccidioides brasiliensis Pb18   3 3
No Yes Coccidioides posadasii RMSCC 3488   3 3
No Yes Coccidioides immitis RS   3 3
No Yes Ajellomyces dermatitidis SLH14081   3 3
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   5 5
No Yes Trichophyton equinum CBS 127.97   5 5
No Yes Trichophyton verrucosum HKI 0517   5 5
No Yes Arthroderma benhamiae CBS 112371   5 5
No Yes Trichophyton tonsurans CBS 112818   5 5
No Yes Trichophyton rubrum CBS 118892   5 5
No Yes Uncinocarpus reesii 1704   2 2
No Yes Aspergillus zonatus v1.0   4 4
No Yes Penicillium chrysogenum Wisconsin 54-1255   6 6
No Yes Penicillium chrysogenum v1.0   6 6
No Yes Aspergillus acidus v1.0   5 5
No Yes Aspergillus fumigatus Af293   6 6
No Yes Aspergillus brasiliensis v1.0   6 6
No Yes Aspergillus nidulans FGSC A4   4 4
No Yes Aspergillus sydowii v1.0   7 7
No Yes Aspergillus versicolor v1.0   6 6
No Yes Aspergillus glaucus   7 7
No Yes Aspergillus carbonarius ITEM 5010   5 5
No Yes Neosartorya fischeri NRRL 181   6 6
No Yes Aspergillus terreus NIH2624   5 5
No Yes Aspergillus tubingensis v1.0   5 5
No Yes Aspergillus wentii v1.0   7 7
No Yes Aspergillus oryzae RIB40   3 3
No Yes Aspergillus niger 22   5 5
No Yes Aspergillus niger ATCC 1015   5 5
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Aspergillus clavatus NRRL 1   4 4
No Yes Penicillium marneffei ATCC 18224   7 7
No Yes Tuber melanosporum Mel28 22   3 3
No Yes Tuber melanosporum Vittad Perigord truffle 4 4
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   3 3
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   2 2
No Yes Candida dubliniensis CD36   3 3
No Yes Candida tropicalis MYA-3404   3 3
No Yes Candida parapsilosis   3 3
No Yes Candida albicans SC5314   3 3
No Yes Lodderomyces elongisporus NRRL YB-4239   2 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   2 2
No Yes Candida guilliermondii ATCC 6260   2 2
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   2 2
No Yes Debaromyces hansenii   4 4
No Yes Wickerhamomyces anomalus   3 3
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   2 2
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   3 3
No Yes Candida glabrata CBS138   4 4
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   2 2
No Yes Kluyveromyces waltii   1 1
No Yes Zygosaccharomyces rouxii   4 4
No Yes Saccharomyces mikatae MIT   4 4
No Yes Saccharomyces paradoxus MIT   4 4
No Yes Saccharomyces cerevisiae 76 Baker's yeast 4 4
No Yes Saccharomyces bayanus MIT   3 3
No Yes Kluyveromyces lactis   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Catenaria anguillulae PL171 v1.0   24 24
No Yes Allomyces macrogynus ATCC 38327   21 21
No Yes Spizellomyces punctatus DAOM BR117   24 24
No Yes Dictyostelium discoideum   21 21
No Yes Dictyostelium purpureum   13 13
No Yes Entamoeba dispar 1.2   1 1
No Yes Selaginella moellendorffii   2 2
No Yes Eucalyptus grandis v201 Rose gum 2 2
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 2 2
No Yes Glycine max v109 Soybean 2 2
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 2 2
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 2 2
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   2 2
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   5 5
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   7 7
No Yes Volvox carteri v199   7 7
No Yes Chlamydomonas reinhardtii 4.0   6 6
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   2 2
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   4 3
No Yes Thecamonas trahens ATCC 50062   7 7
No Yes Bigelowiella natans CCMP2755 22   7 7
No Yes Cyanophora paradoxa   12 12
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Ectocarpus siliculosus   2 2
No Yes Aureococcus anophagefferens   3 3
No Yes Albugo laibachii 22   14 14
No Yes Pythium iwayamai DAOM BR242034 22   10 10
No Yes Pythium arrhenomanes ATCC 12531 22   10 10
No Yes Pythium ultimum v1.7-2   11 11
No Yes Pythium aphanidermatum DAOM BR444 22   9 9
No Yes Pythium irregulare DAOM BR486 22   12 12
No Yes Pythium vexans DAOM BR484 22   8 8
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 13 13
No Yes Phytophthora sojae 1.1   12 12
No Yes Phytophthora infestans T30-4   13 13
No Yes Phytophthora capsici   4 4
No Yes Hyaloperonospora arabidopsidis 22   6 6
No Yes Phaeodactylum tricornutumCCAP 1055/1   3 3
No Yes Fragilariopsis cylindrus   16 16
No Yes Thalassiosira pseudonana CCMP1335   3 3
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Paramecium tetraurelia   16 16
No Yes Tetrahymena thermophila SB210 1   15 15
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Symbiodinium minutum clade B1 v1.2   32 32
No Yes Naegleria gruberi   5 5
No Yes Trichomonas vaginalis   1 1
No Yes Guillardia theta CCMP2712 v1.0   43 43
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Roseiflexus sp. RS-1   1 1
No Yes Truepera radiovictrix DSM 17093   4 4
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Aerococcus urinae ACS-120-V-Col10a   1 1
No Yes Exiguobacterium sp. MH3   1 1
No Yes Exiguobacterium sp. AT1b   1 1
No Yes Exiguobacterium sibiricum 255-15   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Salinibacter ruber M8   4 4
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Spirosoma linguale DSM 74   2 2
No Yes Runella slithyformis DSM 19594   1 1
No Yes Krokinobacter sp. 4H-3-7-5   2 2
No Yes Polaribacter sp. MED152   1 1
No Yes Phycisphaera mikurensis NBRC 102666   2 2
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Candidatus Saccharimonas aalborgensis   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Gallionella capsiferriformans ES-2   1 1
No Yes Candidatus Puniceispirillum marinum IMCC1322   1 1
No Yes alpha proteobacterium HIMB5   1 1
No Yes alpha proteobacterium HIMB59   1 1
No Yes Candidatus Pelagibacter sp. IMCC9063   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Thioalkalimicrobium cyclicum ALM1   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   2 2
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Natrinema sp. J7-2   2 2
No Yes Natrialba magadii ATCC 43099   4 4
No Yes Halorubrum lacusprofundi ATCC 49239   2 2
No Yes Haloquadratum walsbyi DSM 16790   3 3
No Yes Halomicrobium mukohataei DSM 12286   4 4
No Yes Halorhabdus utahensis DSM 12940   2 2
No Yes Natronomonas pharaonis DSM 2160   5 5
No Yes Haloarcula hispanica ATCC 33960   4 4
No Yes Haloarcula marismortui ATCC 43049   6 6
No Yes Halobacterium salinarum R1   4 4
No Yes Halobacterium sp. NRC-1   4 4
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 1321 1301
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 143
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 124 118
No Yes Ascaris suum Victoria/Ghent Pig roundworm 246 244
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1112 1107
No Yes Cryptococcus neoformans var. grubii H99   3 3
No Yes Cryptococcus neoformans B-3501A   4 4
No Yes Cryptococcus neoformans JEC21   2 2
No Yes Paracoccidioides brasiliensis Pb01   4 4
No Yes Paracoccidioides brasiliensis Pb03   3 3
No Yes Coccidioides posadasii str. Silveira   4 4
No Yes Coccidioides immitis RMSCC 3703   4 4
No Yes Coccidioides immitis RMSCC 2394   4 4
No Yes Coccidioides immitis H538.4   2 2
No Yes Ajellomyces dermatitidis ER-3   4 4
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   3 3
No Yes Histoplasma capsulatum G186AR   3 3
No Yes Aspergillus fumigatus A1163   6 6
No Yes Candida albicans WO-1   4 4
No Yes Saccharomyces cerevisiae UC5   3 3
No Yes Saccharomyces cerevisiae PW5   3 3
No Yes Saccharomyces cerevisiae FL100   3 3
No Yes Saccharomyces cerevisiae CLIB324   2 2
No Yes Saccharomyces cerevisiae CBS7960   3 3
No Yes Saccharomyces cerevisiae YJM269   4 4
No Yes Saccharomyces cerevisiae T7   4 4
No Yes Saccharomyces cerevisiae FostersB   3 3
No Yes Saccharomyces cerevisiae FostersO   3 3
No Yes Saccharomyces cerevisiae VL3   4 4
No Yes Saccharomyces cerevisiae Vin13   3 3
No Yes Saccharomyces cerevisiae LalvinQA23   3 3
No Yes Saccharomyces cerevisiae AWRI796   3 3
No Yes Saccharomyces cerevisiae Sigma1278b   4 4
No Yes Saccharomyces cerevisiae W303   4 4
No Yes Saccharomyces cerevisiae JAY291   4 4
No Yes Saccharomyces cerevisiae AWRI1631   3 3
No Yes Saccharomyces cerevisiae YPS163   3 3
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   4 4
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   4 4
No Yes Saccharomyces cerevisiae YJM789   4 4
No Yes Saccharomyces cerevisiae RM11-1a   4 4
No Yes Saccharomyces cerevisiae RM11-1a   4 4
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 4 4
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Batrachochytrium dendrobatidis JEL423   5 5
No Yes Batrachochytrium dendrobatidis JAM81   7 6
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 5 5
No Yes Chroococcidiopsis thermalis PCC 7203   2 2
No Yes Chamaesiphon minutus PCC 6605   2 2
No Yes Cyanothece sp. PCC 7425   2 2
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Thermus oshimai JL-2   1 1
No Yes Thermus thermophilus JL-18   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Salinibacter ruber DSM 13855   4 4
No Yes Nonlabens dokdonensis DSW-6   2 2
No Yes Psychroflexus torquis ATCC 700755   1 1
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Octadecabacter antarcticus 307   1 1
No Yes Octadecabacter arcticus 238   1 1
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Glaciecola psychrophila 170   1 1
No Yes Spiribacter salinus M19-40   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Francisella tularensis subsp. holarctica LVS   1 1
No Yes Halovivax ruber XH-70   1 1
No Yes Natrinema pellirubrum DSM 15624   2 2
No Yes Natronobacterium gregoryi SP2   6 6
No Yes Haloquadratum walsbyi C23   3 3
No Yes Halorhabdus tiamatea SARL4B   2 2
No Yes Natronomonas moolapensis 8.8.11   3 3
No Yes Haloarcula hispanica N601   4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 1500 1497
No Yes Homo sapiens (NCBI version) Human 897 896
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1720 1716
No Yes Heliconius numata (Incomplete)   7 7
No Yes Loa loa v3.3 (Request) Eye worm 113 109
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 100 100
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 53 51
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 2 2
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 869 867
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 599 598
No Yes Gorilla gorilla 69_3.1 Western gorilla 713 710
No Yes Pongo abelii 69_2 Sumatran orangutan 576 574
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 445 444
No Yes Macaca mulatta 69_1 Rhesus monkey 674 670
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 651 648
No Yes Otolemur garnettii 69_3 Small-eared galago 1037 1034
No Yes Microcebus murinus 69_1 Gray mouse lemur 515 492
No Yes Rattus norvegicus 69_3.4 Norway rat 1662 1657
No Yes Mus musculus 69_38 House mouse 1722 1720
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 557 540
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1181 1177
No Yes Cavia porcellus 69_3 Domestic guinea pig 1127 1125
No Yes Oryctolagus cuniculus 69_2 Rabbit 1175 1174
No Yes Ochotona princeps 69 American pika 432 412
No Yes Tupaia belangeri 69 Northern tree shrew 663 636
No Yes Sus scrofa 69_10.2 Pig 1439 1434
No Yes Bos taurus 69_3.1 Cattle 1333 1328
No Yes Vicugna pacos 69_1 Alpaca 449 420
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 243 234
No Yes Mustela putorius furo 69_1.0 Domestic ferret 995 994
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1087 1084
No Yes Canis familiaris 69_3.1 Dog 875 874
No Yes Felis catus 69 Domestic cat 446 424
No Yes Equus caballus 69_2 Horse 1273 1268
No Yes Myotis lucifugus 69_2.0 Little brown bat 790 784
No Yes Pteropus vampyrus 69_1 Large flying fox 540 525
No Yes Sorex araneus 69_1 European shrew 579 559
No Yes Erinaceus europaeus 69 Western European hedgehog 580 556
No Yes Procavia capensis 69_1 Cape rock hyrax 481 466
No Yes Loxodonta africana 69_3 African savanna elephant 2282 2280
No Yes Echinops telfairi 69 Small Madagascar hedgehog 579 548
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 652 624
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 610 590
No Yes Macropus eugenii 69_1.0 Tammar wallaby 715 690
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1098 1095
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1333 1320
No Yes Ornithorhynchus anatinus 69_5 Platypus 1150 1145
No Yes Petromyzon marinus 69_7.0 Sea lamprey 231 229
No Yes Meleagris gallopavo 69_2 Turkey 306 305
No Yes Gallus gallus 69_2 Chicken 564 560
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 518 517
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 670 663
No Yes Anolis carolinensis 69_2.0 Green anole 425 423
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 788 785
No Yes Latimeria chalumnae 69_1 Coelacanth 575 560
No Yes Gadus morhua 69_1 Atlantic cod 464 447
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 472 470
No Yes Takifugu rubripes 69_4 Torafugu 494 483
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 543 540
No Yes Oryzias latipes 69_1 Japanese medaka 506 501
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 532 531
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 639 636
No Yes Danio rerio 69_9 Zebrafish 802 800
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 93 90
No Yes Ciona intestinalis 69 Vase tunicate 162 162
No Yes Drosophila melanogaster 69_5 Fruit fly 95 88
No Yes Caenorhabditis elegans 69_215 Roundworm 1034 1031
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 4 4
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome)   4 4
No Yes 1_Upper_euphotic (meta-genome)   5 5
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   6 6
No Yes 4_050719Q (meta-genome)   7 7
No Yes 5_050719P (meta-genome)   8 8
No Yes 6_Upper_euphotic (meta-genome)   4 4
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   4 4
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   2 2
No Yes Combined (meta-genome)   2 2
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   5 5
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   283525 280895
No Yes Protozoadb 2010_08 (Protozoadb)   7 7
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   27 27
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   11 11
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   27 27
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   31392 30993
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   220865 217479
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2640 2638
No Yes NCBI viral sequences (Viral)   90 90
No Yes PDB chains (SCOP 1.75) (PDB)   43 43
No Yes Protein Data Bank (all PDB sequenc)   703 703
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1271 1271
No Yes TargetDB (Targets)   525 524
No Yes UniProt viral sequences (Viral)   311 311

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