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Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain superfamily domain assignments
in
Brachypodium distachyon

Assignment details

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Brachypodium distachyon has 21 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G11040.1   5.1e-34   32-159   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  0.00000000000000131   146-203   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI1G11530.1   9.94e-24   18-122   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  4.18e-23   109-205   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI1G19050.1   7.32e-31   74-194   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  6.02e-21   166-261   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI1G29140.1   1.05e-28   118-230   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  3.27e-16   49-117   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI1G62057.1   3.79e-28   34-138   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  3.4e-23   105-207   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI3G33716.1   4.77e-35   252-380   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI3G38270.1   3.79e-21   238-321   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  4.71e-16   157-241   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI3G56070.1   6.15e-29   61-183   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  1.44e-22   154-259   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI4G26530.1   7.32e-22   119-225   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  2.48e-20   192-317   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI4G31970.1   1.7e-23   239-342   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
  6.15e-21   168-264   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI4G37530.1   6.02e-30   610-737   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  
EG:BRADI4G43037.1   4.58e-26   98-215   Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   174247 174247
No Yes Homo sapiens 76_38 Human 88 55
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 23 14
No Yes Gorilla gorilla 76_3.1 Western gorilla 31 18
No Yes Pongo abelii 76_2 Sumatran orangutan 24 14
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 29 16
No Yes Papio anubis 76 Olive baboon 27 15
No Yes Macaca mulatta 76_1 Rhesus monkey 32 21
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 55 32
No Yes Otolemur garnettii 76_3 Small-eared galago 26 15
No Yes Microcebus murinus 76_1 Gray mouse lemur 19 13
No Yes Rattus norvegicus 76_5.0 Norway rat 31 17
No Yes Mus musculus 76_38 House mouse 53 29
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 16 11
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 20 12
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 25 14
No Yes Cavia porcellus 76_3 Domestic guinea pig 30 16
No Yes Oryctolagus cuniculus 76_2 Rabbit 24 14
No Yes Ochotona princeps 76 American pika 16 12
No Yes Tupaia belangeri 76 Northern tree shrew 13 9
No Yes Sus scrofa 76_10.2 Pig 23 14
No Yes Bos taurus 76_3.1 Cattle 25 15
No Yes Ovis aries 76_3.1 Sheep 24 16
No Yes Vicugna pacos 76_1 Alpaca 6 5
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 23 14
No Yes Mustela putorius furo 76_1.0 Domestic ferret 27 15
No Yes Ailuropoda melanoleuca 76_1 Giant panda 30 18
No Yes Canis familiaris 76_3.1 Dog 28 18
No Yes Felis catus 76_6.2 Domestic cat 23 14
No Yes Equus caballus 76_2 Horse 26 16
No Yes Myotis lucifugus 76_2.0 Little brown bat 27 17
No Yes Pteropus vampyrus 76_1 Large flying fox 20 13
No Yes Sorex araneus 76_1 European shrew 10 8
No Yes Erinaceus europaeus 76 Western European hedgehog 13 8
No Yes Procavia capensis 76_1 Cape rock hyrax 20 11
No Yes Loxodonta africana 76_3 African savanna elephant 33 21
No Yes Echinops telfairi 76 Small Madagascar hedgehog 14 10
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 34 20
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 8 6
No Yes Macropus eugenii 76_1.0 Tammar wallaby 23 14
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 37 21
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 30 16
No Yes Ornithorhynchus anatinus 76_5 Platypus 20 14
No Yes Saccoglossus kowalevskii v3.0   49 31
No Yes Petromyzon marinus 76_7.0 Sea lamprey 15 10
No Yes Meleagris gallopavo 76_2 Turkey 21 12
No Yes Gallus gallus 76_4 Chicken 22 12
No Yes Anas platyrhynchos 76_1.0 Mallard 19 12
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 17 12
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 19 11
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 18 10
No Yes Anolis carolinensis 76_2.0 Green anole 21 13
No Yes Xenopus laevis African clawed frog 10 7
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 30 17
No Yes Latimeria chalumnae 76_1 Coelacanth 33 18
No Yes Lepisosteus oculatus 76 Spotted gar 31 17
No Yes Gadus morhua 76_1 Atlantic cod 21 14
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 34 21
No Yes Takifugu rubripes 76_4 Torafugu 61 34
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 24 14
No Yes Oryzias latipes 76_1 Japanese medaka 23 14
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 25 15
No Yes Poecilia formosa 76 Amazon molly 25 15
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 30 17
No Yes Astyanax mexicanus 76 Mexican tetra 27 15
No Yes Danio rerio 76_9 Zebrafish 36 21
No Yes Oikopleura dioica   14 9
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 15 10
No Yes Ciona intestinalis 76 Vase tunicate 16 9
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 17 13
No Yes Adineta vaga   83 47
No Yes Octopus bimaculoides 280   18 14
No Yes Crassostrea gigas 22 Pacific oyster 16 11
No Yes Lottia gigantea Owl limpet 19 12
No Yes Helobdella robusta   37 24
No Yes Capitella sp. I   16 11
No Yes Danaus plexippus OGS1.0 Monarch butterfly 13 10
No Yes Heliconius melpomene Postman butterfly 11 7
No Yes Bombyx mori Domestic silkworm 12 10
No Yes Nasonia vitripennis Jewel wasp 6 4
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 28 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 7 6
No Yes Linepithema humile v1.1 Argentine ant 9 7
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 10 7
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 9 6
No Yes Atta cephalotes v1.1   9 8
No Yes Camponotus floridanus v3.3 Florida carpenter ant 10 7
No Yes Lucilia cuprina Australian sheep blowfly 8 5
No Yes Drosophila grimshawi 1.3   9 7
No Yes Drosophila willistoni 1.3   11 8
No Yes Drosophila pseudoobscura 2.13   11 9
No Yes Drosophila persimilis 1.3   8 7
No Yes Drosophila suzukii   10 7
No Yes Drosophila yakuba 1.3   11 9
No Yes Drosophila simulans 1.3   12 7
No Yes Drosophila sechellia 1.3   15 9
No Yes Drosophila melanogaster 76_5 Fruit fly 18 11
No Yes Drosophila erecta 1.3   11 8
No Yes Drosophila ananassae 1.3   10 8
No Yes Drosophila virilis 1.2   11 8
No Yes Drosophila mojavensis 1.3   10 8
No Yes Megaselia scalaris 22   4 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 8 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 4
No Yes Anopheles darlingi 22 American malaria mosquito 5 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 3
No Yes Tribolium castaneum 3.0 Red flour beetle 14 10
No Yes Pediculus humanus corporis (Early assembly) Human body louse 10 6
No Yes Acyrthosiphon pisum Pea aphid 4 3
No Yes Rhodnius prolixus 22   10 7
No Yes Daphnia pulex Common water flea 7 4
No Yes Strigamia maritima 22   11 7
No Yes Sarcoptes scabiei   2 1
No Yes Tetranychus urticae Two-spotted spider mite 7 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 3
No Yes Pristionchus pacificus   7 5
No Yes Meloidogyne incognita Southern root-knot nematode 7 3
No Yes Meloidogyne hapla   3 1
No Yes Onchocerca volvulus 22   4 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 4 2
No Yes Caenorhabditis japonica   2 1
No Yes Caenorhabditis brenneri   3 2
No Yes Caenorhabditis remanei   2 1
No Yes Caenorhabditis elegans 76_235 Roundworm 2 1
No Yes Caenorhabditis briggsae 2   2 1
No Yes Trichinella spiralis 22   4 3
No Yes Hymenolepis microstoma   7 4
No Yes Echinococcus multilocularis   9 6
No Yes Echinococcus granulosus   7 5
No Yes Taenia solium Pork tapeworm 9 6
No Yes Schistosoma mansoni   18 10
No Yes Mnemiopsis leidyi Sea walnut 16 9
No Yes Acropora digitifera v1.0   27 18
No Yes Nematostella vectensis 1.0 Starlet sea anemone 38 26
No Yes Hydra vulgaris   21 15
No Yes Amphimedon queenslandica   21 11
No Yes Trichoplax adhaerens   23 13
No Yes Proterospongia sp. ATCC 50818   27 21
No Yes Monosiga brevicollis   22 15
No Yes Sphaeroforma arctica JP610   2 2
No Yes Capsaspora owczarzaki ATCC 30864   7 3
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Trichoderma atroviride   2 1
No Yes Trichoderma virens Gv29-8   2 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   2 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   3 2
No Yes Aspergillus terreus NIH2624   4 2
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Catenaria anguillulae PL171 v1.0   9 5
No Yes Allomyces macrogynus ATCC 38327   15 7
No Yes Spizellomyces punctatus DAOM BR117   8 5
No Yes Dictyostelium discoideum   9 7
No Yes Dictyostelium purpureum   10 7
No Yes Selaginella moellendorffii   33 22
No Yes Pinus taeda Loblolly pine 10 9
No Yes Picea abies Norway spruce 7 5
No Yes Eucalyptus grandis v201 Rose gum 26 18
No Yes Theobroma cacao B97-61/B2 v1 Cacao 16 10
No Yes Gossypium raimondii v221   79 49
No Yes Citrus clementina v165   25 16
No Yes Citrus sinensis v154 Sweet orange 17 13
No Yes Thellungiella halophila v173   26 17
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 34 22
No Yes Capsella rubella v183   30 18
No Yes Arabidopsis lyrata Lyrate rockcress 31 20
No Yes Arabidopsis thaliana 10 Thale cress 29 19
No Yes Carica papaya Papaya 6 4
No Yes Medicago truncatula Barrel medic 94 50
No Yes Phaseolus vulgaris v186 French bean 41 26
No Yes Glycine max v109 Soybean 55 37
No Yes Cucumis sativus v122 Cucumber 32 22
No Yes Fragaria vesca Wild strawberry 15 10
No Yes Malus domestica v196 Apple 33 23
No Yes Prunus persica v139 Peach 14 10
No Yes Linum usitatissimum v200 Flax 43 28
No Yes Manihot esculenta v147 Cassava 33 22
No Yes Populus trichocarpa v156 Black cottonwood 31 22
No Yes Vitis vinifera Wine grape 13 10
No Yes Mimulus guttatus v140 Spotted monkey flower 19 13
No Yes Solanum lycopersicum v.2.3 Tomato 23 16
No Yes Solanum tuberosum Potato 24 16
No Yes Actinidia chinensis Hongyang   27 17
No Yes Aquilegia coerulea v195   34 21
No Yes Triticum urartu 22   10 8
No Yes Triticum aestivum 22 Bread wheat 47 34
No Yes Aegilops tauschii 22   18 11
No Yes Brachypodium distachyon Stiff brome 21 12
No Yes Oryza barthii 22 African wild rice 27 18
No Yes Oryza meridionalis 22   24 16
No Yes Oryza glumaepatula 22   22 13
No Yes Oryza glaberrima African rice 17 11
No Yes Oryza punctata 22   16 11
No Yes Oryza nivara 22   32 21
No Yes Oryza brachyantha 22 Malo sina 12 8
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 19 12
No Yes Oryza sativa v193 Rice 19 12
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 11
No Yes Panicum virgatum v202 Switchgrass 36 23
No Yes Setaria italica v164 Foxtail millet 19 13
No Yes Zea mays subsp. mays Maize 27 19
No Yes Zea mays v181 Maize 28 19
No Yes Sorghum bicolor Sorghum 14 10
No Yes Musa balbisiana Balbis banana 44 29
No Yes Musa acuminata 22 Wild Malaysian banana 43 26
No Yes Amborella trichopoda 22   11 7
No Yes Physcomitrella patens   14 10
No Yes Coccomyxa subellipsoidea sp. C-169 v2   16 9
No Yes Asterochloris sp. Cgr/DA1pho v1.0   21 14
No Yes Chlorella variabilis sp. NC64A   8 7
No Yes Chlorella vulgaris   15 9
No Yes Volvox carteri f. nagariensis   20 13
No Yes Volvox carteri v199   19 12
No Yes Chlamydomonas reinhardtii 4.0   19 13
No Yes Ostreococcus sp. RCC809   9 6
No Yes Ostreococcus lucimarinus CCE9901   9 6
No Yes Ostreococcus tauri   8 5
No Yes Bathycoccus prasinos   9 6
No Yes Micromonas sp. RCC299   15 10
No Yes Micromonas pusilla CCMP1545 v3.0   18 12
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Thecamonas trahens ATCC 50062   27 17
No Yes Bigelowiella natans CCMP2755 22   24 15
No Yes Giardia lamblia 2.3   22 9
No Yes Cyanophora paradoxa   42 21
No Yes Leishmania mexicana 2.4   44 21
No Yes Leishmania major strain Friedlin   45 21
No Yes Leishmania infantum JPCM5 2.4   48 22
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   42 19
No Yes Trypanosoma vivax   38 19
No Yes Trypanosoma cruzi strain CL Brener   45 21
No Yes Trypanosoma congolense 2.4   43 19
No Yes Trypanosoma brucei gambiense v4.1   40 18
No Yes Trypanosoma brucei TREU927 v4.1   41 18
No Yes Ectocarpus siliculosus   62 28
No Yes Aureococcus anophagefferens   50 25
No Yes Albugo laibachii 22   13 7
No Yes Pythium iwayamai DAOM BR242034 22   32 14
No Yes Pythium arrhenomanes ATCC 12531 22   17 11
No Yes Pythium ultimum v1.7-2   42 17
No Yes Pythium aphanidermatum DAOM BR444 22   22 10
No Yes Pythium irregulare DAOM BR486 22   33 16
No Yes Pythium vexans DAOM BR484 22   32 13
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 27 15
No Yes Phytophthora sojae 1.1   29 16
No Yes Phytophthora infestans T30-4   41 17
No Yes Phytophthora capsici   16 10
No Yes Hyaloperonospora arabidopsidis 22   2 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   15 7
No Yes Fragilariopsis cylindrus   32 21
No Yes Thalassiosira pseudonana CCMP1335   27 23
No Yes Perkinsus marinus ATCC 50983   41 24
No Yes Paramecium tetraurelia   967 511
No Yes Tetrahymena thermophila SB210 1   281 140
No Yes Ichthyophthirius multifiliis strain G5   295 144
No Yes Cryptosporidium hominis   8 4
No Yes Cryptosporidium muris   10 5
No Yes Cryptosporidium parvum Iowa II   10 5
No Yes Neospora caninum   33 16
No Yes Toxoplasma gondii VEG   33 17
No Yes Toxoplasma gondii ME49   33 17
No Yes Toxoplasma gondii GT1   31 18
No Yes Babesia bovis T2Bo   24 10
No Yes Theileria parva   7 4
No Yes Theileria annulata   8 3
No Yes Plasmodium falciparum 3D7   23 12
No Yes Plasmodium vivax SaI-1 7.0   22 13
No Yes Plasmodium knowlesi strain H   23 14
No Yes Plasmodium yoelii ssp. yoelii 1   18 11
No Yes Plasmodium chabaudi   23 14
No Yes Plasmodium berghei ANKA   24 14
No Yes Symbiodinium minutum clade B1 v1.2   170 103
No Yes Naegleria gruberi   32 20
No Yes Trichomonas vaginalis   11 7
No Yes Guillardia theta CCMP2712 v1.0   193 114
No Yes Emiliania huxleyi CCMP1516   111 75
No Yes Synechocystis sp. PCC 6803   3 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 6312   2 1
No Yes Microcoleus sp. PCC 7113   3 2
No Yes Trichodesmium erythraeum IMS101   2 1
No Yes Geitlerinema sp. PCC 7407   2 1
No Yes Cyanothece sp. PCC 8802   3 1
No Yes Calothrix sp. PCC 7507   2 1
No Yes Mycoplasma fermentans M64   4 4
No Yes Atopobium parvulum DSM 20469   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Streptomyces avermitilis MA-4680   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Salinispora arenicola CNS-205   2 2
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Jonesia denitrificans DSM 20603   1 1
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   1 1
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ruminococcus bromii   1 1
No Yes Oscillibacter valericigenes Sjm18-20   2 1
No Yes butyrate-producing bacterium SS3/4   3 1
No Yes Acetobacterium woodii DSM 1030   4 3
No Yes Clostridium difficile 630   3 2
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium lentocellum DSM 5427   2 1
No Yes Butyrivibrio proteoclasticus B316   4 2
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   2 2
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium beijerinckii NCIMB 8052   4 3
No Yes Clostridium tetani E88   1 1
No Yes Clostridium botulinum A str. ATCC 3502   2 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 2
No Yes Thermodesulfobium narugense DSM 14796   12 6
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Oenococcus oeni PSU-1   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus sp. I-G2   1 1
No Yes Streptococcus intermedius JTH08   1 1
No Yes Streptococcus gallolyticus UCN34   1 1
No Yes Streptococcus pseudopneumoniae IS7493   1 1
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Streptococcus equi subsp. equi 4047   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   1 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   1 1
No Yes Streptococcus macedonicus ACA-DC 198   1 1
No Yes Streptococcus mitis B6   1 1
No Yes Streptococcus uberis 0140J   1 1
No Yes Streptococcus parauberis KCTC 11537   1 1
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus pyogenes str. Manfredo   1 1
No Yes Streptococcus pneumoniae P1031   1 1
No Yes Streptococcus agalactiae A909   1 1
No Yes Streptococcus mutans NN2025   1 1
No Yes Streptococcus thermophilus LMD-9   1 1
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus sanguinis SK36   1 1
No Yes Streptococcus salivarius 57.I   1 1
No Yes Streptococcus oralis Uo5   1 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Brevibacillus brevis NBRC 100599   3 2
No Yes Paenibacillus mucilaginosus 3016   2 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Lysinibacillus sphaericus C3-41   3 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Melioribacter roseus P3M   5 2
No Yes Ignavibacterium album JCM 16511   7 4
No Yes Haliscomenobacter hydrossis DSM 1100   10 6
No Yes Saprospira grandis str. Lewin   19 12
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   3 3
No Yes Flexibacter litoralis DSM 6794   19 13
No Yes Belliella baltica DSM 15883   9 3
No Yes Cyclobacterium marinum DSM 745   16 8
No Yes Marivirga tractuosa DSM 4126   21 10
No Yes Fibrella aestuarina   5 5
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   20 10
No Yes Spirosoma linguale DSM 74   8 7
No Yes Runella slithyformis DSM 19594   5 5
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Odoribacter splanchnicus DSM 20712   6 3
No Yes Prevotella melaninogenica ATCC 25845   5 3
No Yes Prevotella intermedia 17   5 3
No Yes Prevotella denticola F0289   7 5
No Yes Prevotella ruminicola 23   4 2
No Yes Alistipes finegoldii DSM 17242   3 2
No Yes Bacteroides salanitronis DSM 18170   4 2
No Yes Bacteroides helcogenes P 36-108   7 3
No Yes Bacteroides vulgatus ATCC 8482   3 1
No Yes Bacteroides thetaiotaomicron VPI-5482   7 3
No Yes Bacteroides fragilis YCH46   3 1
No Yes Pedobacter saltans DSM 12145   2 2
No Yes Solitalea canadensis DSM 3403   7 6
No Yes Pedobacter heparinus DSM 2366   3 3
No Yes Sphingobacterium sp. 21   1 1
No Yes Fluviicola taffensis DSM 16823   32 16
No Yes Owenweeksia hongkongensis DSM 17368   9 5
No Yes Zunongwangia profunda SM-A87   3 2
No Yes Krokinobacter sp. 4H-3-7-5   8 6
No Yes Gramella forsetii KT0803   2 2
No Yes Lacinutrix sp. 5H-3-7-4   6 5
No Yes Maribacter sp. HTCC2170   3 3
No Yes Robiginitalea biformata HTCC2501   2 2
No Yes Croceibacter atlanticus HTCC2559   3 2
No Yes Aequorivita sublithincola DSM 14238   12 6
No Yes Zobellia galactanivorans   11 7
No Yes Muricauda ruestringensis DSM 13258   3 3
No Yes Cellulophaga algicola DSM 14237   19 13
No Yes Cellulophaga lytica DSM 7489   10 7
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Polaribacter sp. MED152   13 7
No Yes Capnocytophaga canimorsus Cc5   3 1
No Yes Flavobacterium indicum GPTSA100-9   9 5
No Yes Flavobacterium psychrophilum JIP02/86   3 2
No Yes Flavobacterium branchiophilum FL-15   4 4
No Yes Flavobacterium columnare ATCC 49512   6 5
No Yes Flavobacterium johnsoniae UW101   7 5
No Yes Fibrobacter succinogenes subsp. succinogenes S85   5 4
No Yes Waddlia chondrophila WSU 86-1044   6 4
No Yes Candidatus Protochlamydia amoebophila UWE25   6 4
No Yes Parachlamydia acanthamoebae UV-7   26 14
No Yes Simkania negevensis Z   14 5
No Yes Chlamydophila pecorum E58   5 2
No Yes Chlamydia muridarum Nigg   4 2
No Yes Chlamydophila pneumoniae TW-183   4 2
No Yes Chlamydophila caviae GPIC   4 2
No Yes Chlamydophila felis Fe/C-56   4 2
No Yes Chlamydophila abortus S26/3   5 2
No Yes Chlamydia psittaci 01DC11   4 2
No Yes Chlamydia trachomatis B/Jali20/OT   4 2
No Yes Pirellula staleyi DSM 6068   3 2
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Turneriella parva DSM 21527   5 4
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   5 4
No Yes Leptospira interrogans serovar Lai str. IPAV   9 8
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   11 8
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Elusimicrobium minutum Pei191   2 2
No Yes Streptobacillus moniliformis DSM 12112   4 2
No Yes Sebaldella termitidis ATCC 33386   27 15
No Yes Leptotrichia buccalis C-1013-b   9 5
No Yes Ilyobacter polytropus DSM 2926   6 2
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   44 31
No Yes Sulfurospirillum deleyianum DSM 6946   1 1
No Yes Sulfurospirillum barnesii SES-3   1 1
No Yes Sulfurimonas autotrophica DSM 16294   1 1
No Yes Helicobacter hepaticus ATCC 51449   6 5
No Yes Helicobacter cinaedi PAGU611   3 3
No Yes Sulfurovum sp. NBC37-1   3 2
No Yes Syntrophus aciditrophicus SB   2 1
No Yes Syntrophobacter fumaroxidans MPOB   2 1
No Yes Desulfurivibrio alkaliphilus AHT2   1 1
No Yes Desulfotalea psychrophila LSv54   3 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfovibrio salexigens DSM 2638   2 1
No Yes Haliangium ochraceum DSM 14365   5 3
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   5 4
No Yes Corallococcus coralloides DSM 2259   10 5
No Yes Myxococcus xanthus DK 1622   4 3
No Yes Myxococcus fulvus HW-1   3 3
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Neisseria meningitidis alpha14   2 2
No Yes Neisseria meningitidis FAM18   2 2
No Yes Neisseria lactamica 020-06   3 3
No Yes Neisseria gonorrhoeae NCCP11945   2 2
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   1 1
No Yes Burkholderia phymatum STM815   2 1
No Yes Ralstonia eutropha JMP134   2 1
No Yes Ralstonia eutropha H16   2 1
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   2 1
No Yes Burkholderia thailandensis E264   2 2
No Yes Burkholderia gladioli BSR3   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Variovorax paradoxus S110   2 2
No Yes Herminiimonas arsenicoxydans   2 1
No Yes Collimonas fungivorans Ter331   2 1
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Bordetella avium 197N   3 2
No Yes Methylotenera versatilis 301   2 2
No Yes Magnetococcus marinus MC-1   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Dinoroseobacter shibae DFL 12   3 1
No Yes Phaeobacter gallaeciensis 2.10   4 1
No Yes Jannaschia sp. CCS1   5 1
No Yes Ruegeria sp. TM1040   4 1
No Yes Ruegeria pomeroyi DSS-3   4 1
No Yes Ketogulonicigenium vulgare Y25   4 1
No Yes Ketogulonigenium vulgarum WSH-001   4 1
No Yes Roseobacter litoralis Och 149   3 1
No Yes Roseobacter denitrificans OCh 114   4 1
No Yes Rhodobacter sphaeroides ATCC 17029   3 1
No Yes Rhodobacter capsulatus SB 1003   4 1
No Yes Paracoccus denitrificans PD1222   4 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   3 2
No Yes Azospirillum brasilense Sp245   3 3
No Yes alpha proteobacterium HIMB5   2 2
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocystis sp. SC2   3 1
No Yes Saccharophagus degradans 2-40   1 1
No Yes Cellvibrio japonicus Ueda107   2 1
No Yes Haemophilus somnus 129PT   1 1
No Yes Haemophilus parainfluenzae T3T1   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Idiomarina loihiensis L2TR   3 1
No Yes Shewanella loihica PV-4   13 4
No Yes Shewanella halifaxensis HAW-EB4   2 2
No Yes Shewanella pealeana ATCC 700345   4 4
No Yes Shewanella oneidensis MR-1   22 6
No Yes Shewanella baltica OS185   20 5
No Yes Shewanella woodyi ATCC 51908   9 3
No Yes Shewanella sp. MR-4   19 5
No Yes Shewanella amazonensis SB2B   5 1
No Yes Shewanella putrefaciens CN-32   17 6
No Yes Glaciecola sp. 4H-3-7+YE-5   3 1
No Yes Marinobacter adhaerens HP15   2 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   2 1
No Yes Marinobacter aquaeolei VT8   2 1
No Yes Alteromonas sp. SN2   1 1
No Yes Kangiella koreensis DSM 16069   1 1
No Yes Hahella chejuensis KCTC 2396   2 1
No Yes Alcanivorax borkumensis SK2   3 2
No Yes Marinomonas sp. MWYL1   1 1
No Yes Methylomonas methanica MC09   1 1
No Yes Nitrosococcus oceani ATCC 19707   4 1
No Yes Legionella longbeachae NSW150   1 1
No Yes gamma proteobacterium HdN1   11 6
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Yersinia pseudotuberculosis IP 31758   2 1
No Yes Yersinia pestis Pestoides F   3 1
No Yes Pectobacterium atrosepticum SCRI1043   3 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Shigella flexneri 5 str. 8401   3 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   3 1
No Yes Enterobacter sp. 638   1 1
No Yes Citrobacter rodentium ICC168   4 2
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. TKP   3 1
No Yes Pseudomonas sp. UW4   4 2
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   6 3
No Yes Pseudomonas entomophila L48   2 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   3 1
No Yes Pseudomonas stutzeri A1501   2 1
No Yes Pseudomonas fulva 12-X   2 1
No Yes Pseudomonas putida F1   2 1
No Yes Pseudomonas protegens Pf-5   3 1
No Yes Pseudomonas fluorescens SBW25   3 1
No Yes Pseudomonas mendocina ymp   3 2
No Yes Pseudomonas aeruginosa UCBPP-PA14   3 2
No Yes Pseudomonas sp. VLB120   3 1
No Yes Cycloclasticus sp. P1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 43 29
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 18 11
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 5 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 3 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Batrachochytrium dendrobatidis JEL423   10 8
No Yes Batrachochytrium dendrobatidis JAM81   10 7
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 17 10
No Yes Hordeum vulgare 22 Domesticated barley 56 33
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 16 11
No Yes Trypanosoma brucei Lister 427 v4.1   39 17
No Yes Neospora caninum Nc-Liverpool 6.2   33 16
No Yes Plasmodium falciparum HB3   17 10
No Yes Plasmodium falciparum Dd2   17 10
No Yes Chamaesiphon minutus PCC 6605   3 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   3 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   3 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   3 1
No Yes Synechocystis sp. PCC 6803   3 1
No Yes Synechococcus sp. PCC 7002   2 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   6 3
No Yes Oscillatoria acuminata PCC 6304   4 2
No Yes Arthrospira platensis NIES-39   2 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   2 1
No Yes Cyanothece sp. PCC 8801   3 1
No Yes Cyanobacterium aponinum PCC 10605   3 1
No Yes Cyanobacterium stanieri PCC 7202   2 1
No Yes Stanieria cyanosphaera PCC 7437   2 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Mycoplasma bovis PG45   1 1
No Yes Mycoplasma fermentans PG18   1 1
No Yes Mycoplasma agalactiae   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Clostridium difficile BI1   3 2
No Yes Clostridium difficile R20291   3 2
No Yes Clostridium difficile CD196   3 2
No Yes Coprococcus catus GD/7   2 1
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum F str. 230613   2 1
No Yes Clostridium botulinum F str. Langeland   2 1
No Yes Clostridium botulinum B1 str. Okra   2 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   2 1
No Yes Clostridium botulinum A str. ATCC 19397   2 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   1 1
No Yes Streptococcus constellatus subsp. pharyngis C818   1 1
No Yes Streptococcus constellatus subsp. pharyngis C232   1 1
No Yes Streptococcus intermedius B196   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus anginosus C238   1 1
No Yes Streptococcus anginosus C1051   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   1 1
No Yes Streptococcus lutetiensis 033   1 1
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   1 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Streptococcus equi subsp. zooepidemicus   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   1 1
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus iniae SF1   1 1
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus pyogenes HSC5   1 1
No Yes Streptococcus pyogenes A20   1 1
No Yes Streptococcus pyogenes MGAS1882   1 1
No Yes Streptococcus pyogenes MGAS15252   1 1
No Yes Streptococcus pyogenes Alab49   1 1
No Yes Streptococcus pyogenes MGAS10750   1 1
No Yes Streptococcus pyogenes MGAS10270   1 1
No Yes Streptococcus pyogenes MGAS2096   1 1
No Yes Streptococcus pyogenes MGAS9429   1 1
No Yes Streptococcus pyogenes MGAS6180   1 1
No Yes Streptococcus pyogenes NZ131   1 1
No Yes Streptococcus pyogenes MGAS8232   1 1
No Yes Streptococcus pyogenes MGAS10394   1 1
No Yes Streptococcus pyogenes MGAS315   1 1
No Yes Streptococcus pyogenes SSI-1   1 1
No Yes Streptococcus pyogenes M1 476   1 1
No Yes Streptococcus pyogenes MGAS5005   1 1
No Yes Streptococcus pyogenes M1 GAS   1 1
No Yes Streptococcus pneumoniae A026   1 1
No Yes Streptococcus pneumoniae ST556   1 1
No Yes Streptococcus pneumoniae SPNA45   1 1
No Yes Streptococcus pneumoniae SPN994039   1 1
No Yes Streptococcus pneumoniae SPN994038   1 1
No Yes Streptococcus pneumoniae SPN034183   1 1
No Yes Streptococcus pneumoniae SPN034156   1 1
No Yes Streptococcus pneumoniae INV104   1 1
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae OXC141   1 1
No Yes Streptococcus pneumoniae gamPNI0373   1 1
No Yes Streptococcus pneumoniae AP200   1 1
No Yes Streptococcus pneumoniae ATCC 700669   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   1 1
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae G54   1 1
No Yes Streptococcus pneumoniae JJA   1 1
No Yes Streptococcus pneumoniae 70585   1 1
No Yes Streptococcus pneumoniae Hungary19A-6   1 1
No Yes Streptococcus pneumoniae Taiwan19F-14   1 1
No Yes Streptococcus pneumoniae D39   1 1
No Yes Streptococcus pneumoniae 670-6B   1 1
No Yes Streptococcus pneumoniae R6   1 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus agalactiae ILRI112   1 1
No Yes Streptococcus agalactiae ILRI005   1 1
No Yes Streptococcus agalactiae 09mas018883   1 1
No Yes Streptococcus agalactiae 2-22   1 1
No Yes Streptococcus agalactiae SA20-06   1 1
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Streptococcus agalactiae NEM316   1 1
No Yes Streptococcus agalactiae 2603V/R   1 1
No Yes Streptococcus mutans GS-5   1 1
No Yes Streptococcus mutans LJ23   1 1
No Yes Streptococcus mutans UA159   1 1
No Yes Streptococcus thermophilus MN-ZLW-002   1 1
No Yes Streptococcus thermophilus JIM 8232   1 1
No Yes Streptococcus thermophilus ND03   1 1
No Yes Streptococcus thermophilus CNRZ1066   1 1
No Yes Streptococcus thermophilus LMG 18311   1 1
No Yes Streptococcus suis T15   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis ST3   1 1
No Yes Streptococcus suis D9   1 1
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis D12   1 1
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Streptococcus salivarius CCHSS3   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Paenibacillus sp. Y412MC10   2 2
No Yes Paenibacillus mucilaginosus KNP414   3 2
No Yes Paenibacillus mucilaginosus K02   2 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Echinicola vietnamensis DSM 17526   10 3
No Yes Emticicia oligotrophica DSM 17448   4 4
No Yes Prevotella sp. oral taxon 299 str. F0039   3 1
No Yes Prevotella dentalis DSM 3688   5 3
No Yes Alistipes shahii WAL 8301   1 1
No Yes Bacteroides xylanisolvens XB1A   8 5
No Yes Bacteroides fragilis 638R   7 3
No Yes Bacteroides fragilis NCTC 9343   4 1
No Yes Nonlabens dokdonensis DSW-6   6 5
No Yes Psychroflexus torquis ATCC 700755   9 6
No Yes Fibrobacter succinogenes subsp. succinogenes S85   5 4
No Yes Chlamydia pecorum P787   5 2
No Yes Chlamydia pecorum W73   5 2
No Yes Chlamydia pecorum PV3056/3   4 2
No Yes Chlamydophila pneumoniae LPCoLN   4 2
No Yes Chlamydophila pneumoniae J138   4 2
No Yes Chlamydophila pneumoniae CWL029   4 2
No Yes Chlamydophila pneumoniae AR39   4 2
No Yes Chlamydia psittaci 01DC12   4 2
No Yes Chlamydia psittaci WC   4 2
No Yes Chlamydia psittaci M56   4 2
No Yes Chlamydia psittaci WS/RT/E30   4 2
No Yes Chlamydia psittaci VS225   4 2
No Yes Chlamydia psittaci MN   4 2
No Yes Chlamydia psittaci GR9   4 2
No Yes Chlamydia psittaci 84/55   4 2
No Yes Chlamydia psittaci 08DC60   4 2
No Yes Chlamydia psittaci 02DC15   4 2
No Yes Chlamydia psittaci C19/98   4 2
No Yes Chlamydia psittaci NJ1   4 2
No Yes Chlamydia psittaci CP3   4 2
No Yes Chlamydophila psittaci RD1   4 2
No Yes Chlamydia psittaci Mat116   4 2
No Yes Chlamydophila psittaci 6BC   4 2
No Yes Chlamydophila psittaci 6BC   4 2
No Yes Chlamydia trachomatis C/TW-3   4 2
No Yes Chlamydia trachomatis L2/434/Bu(f)   4 2
No Yes Chlamydia trachomatis L2/434/Bu(i)   4 2
No Yes Chlamydia trachomatis IU888   4 2
No Yes Chlamydia trachomatis IU824   4 2
No Yes Chlamydia trachomatis L2b/Canada2   4 2
No Yes Chlamydia trachomatis L2b/Canada1   4 2
No Yes Chlamydia trachomatis L3/404/LN   4 2
No Yes Chlamydia trachomatis L2b/Ams5   4 2
No Yes Chlamydia trachomatis L2b/Ams4   4 2
No Yes Chlamydia trachomatis L2b/Ams3   4 2
No Yes Chlamydia trachomatis L2b/Ams2   4 2
No Yes Chlamydia trachomatis L2b/Ams1   4 2
No Yes Chlamydia trachomatis L2b/795   4 2
No Yes Chlamydia trachomatis L2b/CV204   4 2
No Yes Chlamydia trachomatis L2b/LST   4 2
No Yes Chlamydia trachomatis L2b/UCH-2   4 2
No Yes Chlamydia trachomatis L2b/8200/07   4 2
No Yes Chlamydia trachomatis L2/25667R   4 2
No Yes Chlamydia trachomatis L1/224   4 2
No Yes Chlamydia trachomatis L1/115   4 2
No Yes Chlamydia trachomatis L1/440/LN   4 2
No Yes Chlamydia trachomatis K/SotonK1   4 2
No Yes Chlamydia trachomatis Ia/SotonIa3   4 2
No Yes Chlamydia trachomatis Ia/SotonIa1   4 2
No Yes Chlamydia trachomatis G/SotonG1   4 2
No Yes Chlamydia trachomatis F/SotonF3   4 2
No Yes Chlamydia trachomatis F/SW5   4 2
No Yes Chlamydia trachomatis F/SW4   4 2
No Yes Chlamydia trachomatis E/SotonE8   4 2
No Yes Chlamydia trachomatis E/SotonE4   4 2
No Yes Chlamydia trachomatis E/SW3   4 2
No Yes Chlamydia trachomatis D/SotonD6   4 2
No Yes Chlamydia trachomatis D/SotonD5   4 2
No Yes Chlamydia trachomatis D/SotonD1   4 2
No Yes Chlamydia trachomatis A/5291   4 2
No Yes Chlamydia trachomatis A/363   4 2
No Yes Chlamydia trachomatis RC-J/971   4 2
No Yes Chlamydia trachomatis RC-L2/55   4 2
No Yes Chlamydia trachomatis J/6276tet1   4 2
No Yes Chlamydia trachomatis RC-J/966   4 2
No Yes Chlamydia trachomatis RC-J(s)/122   4 2
No Yes Chlamydia trachomatis RC-F(s)/342   4 2
No Yes Chlamydia trachomatis RC-L2(s)/3   4 2
No Yes Chlamydia trachomatis RC-J/953   4 2
No Yes Chlamydia trachomatis RC-J943   4 2
No Yes Chlamydia trachomatis RC-Fs852   4 2
No Yes Chlamydia trachomatis RC-L2s46   4 2
No Yes Chlamydia trachomatis RC-F69   4 2
No Yes Chlamydia trachomatis L2c   4 2
No Yes Chlamydia trachomatis D-LC   4 2
No Yes Chlamydia trachomatis D-EC   4 2
No Yes Chlamydia trachomatis G/9301   4 2
No Yes Chlamydia trachomatis G/11074   4 2
No Yes Chlamydia trachomatis G/11222   4 2
No Yes Chlamydia trachomatis G/9768   4 2
No Yes Chlamydia trachomatis E/150   4 2
No Yes Chlamydia trachomatis E/11023   4 2
No Yes Chlamydia trachomatis B/TZ1A828/OT   4 2
No Yes Chlamydia trachomatis Sweden2   4 2
No Yes Chlamydia trachomatis E/Bour   4 2
No Yes Chlamydia trachomatis A2497   4 2
No Yes Chlamydia trachomatis A2497   4 2
No Yes Chlamydia trachomatis L2b/UCH-1/proctitis   4 2
No Yes Chlamydia trachomatis 434/Bu   4 2
No Yes Chlamydia trachomatis A/HAR-13   4 2
No Yes Chlamydia trachomatis D/UW-3/CX   4 2
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   5 4
No Yes Leptospira interrogans serovar Lai str. 56601   9 8
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   10 7
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   11 8
No Yes Treponema pedis str. T A4   3 2
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   40 31
No Yes Fusobacterium nucleatum subsp. animalis 4_8   39 27
No Yes Campylobacter jejuni subsp. jejuni 00-2544   2 1
No Yes Campylobacter jejuni subsp. jejuni 00-2538   2 1
No Yes Campylobacter jejuni subsp. jejuni 00-2426   2 1
No Yes Campylobacter jejuni subsp. jejuni 00-2425   2 1
No Yes Campylobacter jejuni subsp. jejuni PT14   2 1
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   2 1
No Yes Campylobacter jejuni subsp. jejuni IA3902   2 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   2 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   2 1
No Yes Desulfocapsa sulfexigens DSM 10523   8 3
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   2 2
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   1 1
No Yes Geobacter sp. M18   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   3 2
No Yes Neisseria meningitidis WUE 2594   2 2
No Yes Neisseria meningitidis G2136   2 2
No Yes Neisseria meningitidis M04-240196   2 2
No Yes Neisseria meningitidis M01-240149   2 2
No Yes Neisseria meningitidis NZ-05/33   2 2
No Yes Neisseria meningitidis M01-240355   2 2
No Yes Neisseria meningitidis 8013   1 1
No Yes Neisseria meningitidis 053442   2 2
No Yes Neisseria meningitidis Z2491   2 2
No Yes Neisseria meningitidis H44/76   2 2
No Yes Neisseria meningitidis alpha710   2 2
No Yes Neisseria meningitidis MC58   2 2
No Yes Neisseria gonorrhoeae TCDC-NG08107   3 3
No Yes Neisseria gonorrhoeae FA 1090   3 3
No Yes Pandoraea pnomenusa 3kgm   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Burkholderia thailandensis MSMB121   3 2
No Yes Burkholderia pseudomallei NCTC 13179   2 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Variovorax paradoxus B4   3 3
No Yes Variovorax paradoxus EPS   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   4 1
No Yes Phaeobacter gallaeciensis DSM 26640   4 1
No Yes Leisingera methylohalidivorans DSM 14336   5 1
No Yes Octadecabacter antarcticus 307   4 1
No Yes Octadecabacter arcticus 238   4 1
No Yes Rhodobacter sphaeroides KD131   3 1
No Yes Rhodobacter sphaeroides ATCC 17025   3 1
No Yes Rhodobacter sphaeroides 2.4.1   3 1
No Yes Paracoccus aminophilus JCM 7686   4 1
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   2 2
No Yes Haemophilus somnus 2336   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Idiomarina loihiensis GSL 199   3 1
No Yes Shewanella sp. W3-18-1   17 6
No Yes Shewanella sp. ANA-3   18 5
No Yes Shewanella baltica BA175   18 5
No Yes Shewanella baltica OS678   18 5
No Yes Shewanella baltica OS117   18 5
No Yes Shewanella baltica OS223   16 4
No Yes Shewanella baltica OS195   18 5
No Yes Shewanella baltica OS155   18 5
No Yes Shewanella sp. MR-7   19 5
No Yes Shewanella putrefaciens 200   17 6
No Yes Alcanivorax dieselolei B5   4 2
No Yes Thioalkalivibrio nitratireducens DSM 14787   3 2
No Yes Yersinia pseudotuberculosis PB1/+   2 1
No Yes Yersinia pseudotuberculosis YPIII   2 1
No Yes Yersinia pseudotuberculosis IP 32953   2 1
No Yes Yersinia pestis biovar Microtus str. 91001   3 1
No Yes Yersinia pestis A1122   3 1
No Yes Yersinia pestis Z176003   3 1
No Yes Yersinia pestis D182038   3 1
No Yes Yersinia pestis D106004   3 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   3 1
No Yes Yersinia pestis Nepal516   3 1
No Yes Yersinia pestis Antiqua   3 1
No Yes Yersinia pestis Angola   3 1
No Yes Yersinia pestis CO92   3 1
No Yes Yersinia pestis KIM10+   3 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   3 1
No Yes Shigella flexneri 2002017   3 1
No Yes Shigella flexneri 2a str. 2457T   3 1
No Yes Shigella flexneri 2a str. 301   3 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   3 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   3 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   3 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   3 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   3 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   3 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   3 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   3 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   3 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   3 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   3 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   3 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   3 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   3 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   3 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   3 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   3 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   3 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   3 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   3 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   3 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   3 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   3 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas denitrificans ATCC 13867   4 2
No Yes Pseudomonas syringae pv. phaseolicola 1448A   3 1
No Yes Pseudomonas syringae pv. syringae B728a   3 1
No Yes Pseudomonas stutzeri CCUG 29243   2 1
No Yes Pseudomonas stutzeri DSM 10701   3 1
No Yes Pseudomonas stutzeri DSM 4166   2 1
No Yes Pseudomonas stutzeri RCH2   2 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   2 1
No Yes Pseudomonas monteilii SB3101   2 1
No Yes Pseudomonas monteilii SB3078   2 1
No Yes Pseudomonas putida H8234   3 1
No Yes Pseudomonas putida HB3267   2 1
No Yes Pseudomonas putida NBRC 14164   2 1
No Yes Pseudomonas putida DOT-T1E   3 1
No Yes Pseudomonas putida S16   2 1
No Yes Pseudomonas putida BIRD-1   2 1
No Yes Pseudomonas putida W619   3 1
No Yes Pseudomonas putida ND6   2 1
No Yes Pseudomonas putida KT2440   5 2
No Yes Pseudomonas putida GB-1   2 1
No Yes Pseudomonas protegens CHA0   3 1
No Yes Pseudomonas poae RE*1-1-14   3 1
No Yes Pseudomonas fluorescens F113   6 3
No Yes Pseudomonas fluorescens A506   4 2
No Yes Pseudomonas fluorescens R124   4 2
No Yes Pseudomonas fluorescens Pf0-1   6 3
No Yes Pseudomonas resinovorans NBRC 106553   2 1
No Yes Pseudomonas mendocina NK-01   4 2
No Yes Pseudomonas aeruginosa SCV20265   4 2
No Yes Pseudomonas aeruginosa MTB-1   3 2
No Yes Pseudomonas aeruginosa LES431   3 2
No Yes Pseudomonas aeruginosa RP73   3 2
No Yes Pseudomonas aeruginosa B136-33   3 2
No Yes Pseudomonas aeruginosa PA1R   4 2
No Yes Pseudomonas aeruginosa PA1   4 2
No Yes Pseudomonas aeruginosa DK2   3 2
No Yes Pseudomonas aeruginosa NCGM2.S1   3 2
No Yes Pseudomonas aeruginosa M18   3 2
No Yes Pseudomonas aeruginosa LESB58   3 2
No Yes Pseudomonas aeruginosa PA7   3 2
No Yes Pseudomonas aeruginosa PAO1   3 2
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   2 1
No Yes Homo sapiens 75_37 (old version GRC) Human 105 66
No Yes Homo sapiens (NCBI version) Human 38 21
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 28 15
No Yes Loa loa v3.3 (Request) Eye worm 4 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 4 2
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 4 2
No Yes Lotus japonicus (Early assembly)   20 16
No Yes Malus x domestica (Duplicate) Apple 33 23
No Yes Ricinus communis (Early assembly) Castor bean 16 11
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   44 29
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 23 16
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 23 16
No Yes Phoenix dactylifera (Early draft) Date palm 13 12
No Yes Homo sapiens 69_37 Human 30 16
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 23 14
No Yes Gorilla gorilla 69_3.1 Western gorilla 24 14
No Yes Pongo abelii 69_2 Sumatran orangutan 24 14
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 26 15
No Yes Macaca mulatta 69_1 Rhesus monkey 22 15
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 27 15
No Yes Otolemur garnettii 69_3 Small-eared galago 26 15
No Yes Microcebus murinus 69_1 Gray mouse lemur 19 13
No Yes Rattus norvegicus 69_3.4 Norway rat 25 13
No Yes Mus musculus 69_38 House mouse 28 15
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 16 11
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 20 12
No Yes Cavia porcellus 69_3 Domestic guinea pig 27 15
No Yes Oryctolagus cuniculus 69_2 Rabbit 24 14
No Yes Ochotona princeps 69 American pika 16 12
No Yes Tupaia belangeri 69 Northern tree shrew 13 9
No Yes Sus scrofa 69_10.2 Pig 23 14
No Yes Bos taurus 69_3.1 Cattle 25 15
No Yes Vicugna pacos 69_1 Alpaca 6 5
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 23 14
No Yes Mustela putorius furo 69_1.0 Domestic ferret 27 15
No Yes Ailuropoda melanoleuca 69_1 Giant panda 26 15
No Yes Canis familiaris 69_3.1 Dog 23 14
No Yes Felis catus 69 Domestic cat 17 12
No Yes Equus caballus 69_2 Horse 24 15
No Yes Myotis lucifugus 69_2.0 Little brown bat 24 14
No Yes Pteropus vampyrus 69_1 Large flying fox 20 13
No Yes Sorex araneus 69_1 European shrew 10 8
No Yes Erinaceus europaeus 69 Western European hedgehog 13 8
No Yes Procavia capensis 69_1 Cape rock hyrax 20 11
No Yes Loxodonta africana 69_3 African savanna elephant 25 16
No Yes Echinops telfairi 69 Small Madagascar hedgehog 14 10
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 10 7
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 8 6
No Yes Macropus eugenii 69_1.0 Tammar wallaby 23 14
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 25 15
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 30 16
No Yes Ornithorhynchus anatinus 69_5 Platypus 18 12
No Yes Petromyzon marinus 69_7.0 Sea lamprey 11 8
No Yes Meleagris gallopavo 69_2 Turkey 21 12
No Yes Gallus gallus 69_2 Chicken 24 14
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 17 12
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 18 10
No Yes Anolis carolinensis 69_2.0 Green anole 22 13
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 21 12
No Yes Latimeria chalumnae 69_1 Coelacanth 25 15
No Yes Gadus morhua 69_1 Atlantic cod 20 13
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 28 18
No Yes Takifugu rubripes 69_4 Torafugu 30 18
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 22 13
No Yes Oryzias latipes 69_1 Japanese medaka 21 12
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 25 15
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 25 15
No Yes Danio rerio 69_9 Zebrafish 26 15
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 9 6
No Yes Ciona intestinalis 69 Vase tunicate 13 8
No Yes Drosophila melanogaster 69_5 Fruit fly 12 8
No Yes Caenorhabditis elegans 69_215 Roundworm 2 1
No Yes Arabidopsis thaliana 10 Thale cress 23 15
No Yes 1_Upper_euphotic (meta-genome)   5 5
No Yes 2_050719S (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   9 7
No Yes 4_050719Q (meta-genome)   4 3
No Yes 4_Deep_abyss (meta-genome)   15 14
No Yes 5_050719P (meta-genome)   4 4
No Yes 5_Below_upper_mesopelagic (meta-genome)   12 9
No Yes 6_Upper_euphotic (meta-genome)   9 6
No Yes 7_Oxygen_minimum_layer (meta-genome)   34 30
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   20 20
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   4 3
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   28 26
No Yes Crater Hills (meta-genome)   7 6
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   15 14
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   10 9
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   7 4
No Yes Dump bottom (Dump bottom) (meta-genome)   18 16
No Yes Dump top (Dump top) (meta-genome)   29 28
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   18 11
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   15 12
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   16 13
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   18 11
No Yes Fungus garden combined (combined) (meta-genome)   3 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   8 8
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   7 7
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   6 5
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   7 6
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   3 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   2 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   83 66
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   4 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   4 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   8 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   6 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   19 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   27 19
No Yes Human Gut Community Subject 7 (meta-genome)   4 3
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   24 19
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 4
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   12 7
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   45 36
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   15 11
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   14 11
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   10 9
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   7 6
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   4 4
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   2 2
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   10 6
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   93827 58536
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   36 28
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   714 367
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   26 16
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   23 21
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   12 8
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   4 3
No Yes Single-cell genome from subgingival tooth surface TM7b (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   8 8
No Yes Sludge/US, Jazz Assembly (meta-genome)   3 3
No Yes Sludge/US, Phrap Assembly (meta-genome)   6 5
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   32 23
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   41 40
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   18 18
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   5 5
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   5 4
No Yes STRING v9.0.5 (STRING)   2590 1503
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   29 27
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Termite Protist Endosymbiont Community (meta-genome)   3 3
No Yes Uniprot 2018_03 genome   48949 29003
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   7 7
No Yes Global Ocean Sampling Expedition (GOS)   5998 4096
No Yes NCBI plasmid sequences (Plasmids)   20 11
No Yes NCBI viral sequences (Viral)   248 163
No Yes PDB chains (SCOP 1.75) (PDB)   8 8
No Yes Protein Data Bank (all PDB sequenc)   42 42
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   72 72
No Yes TargetDB (Targets)   165 90
No Yes The Salmonella enterica Pan-genome (meta-genome)   66 22
No Yes UniProt viral sequences (Viral)   18 18

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